yqjC-yqjD-yqjE-yqjK



Position: 571-680, Conformation: #0







DMS reactivity > 1.0 0.0 0.4 0.7 G/U/No data
Position: 0 (position.label in template: 0.5')5' Position: 1 (position.label in template: 1.A) Reactivity: nanA Position: 2 (position.label in template: 2.G) Reactivity: nanG Position: 3 (position.label in template: 3.A) Reactivity: nanA Position: 4 (position.label in template: 4.G) Reactivity: nanG Position: 5 (position.label in template: 5.C) Reactivity: nanC Position: 6 (position.label in template: 6.C) Reactivity: nanC Position: 7 (position.label in template: 7.G) Reactivity: nanG Position: 8 (position.label in template: 8.U) Reactivity: nanU Position: 9 (position.label in template: 9.U) Reactivity: nanU Position: 10 (position.label in template: 10.A) Reactivity: nanA Position: 11 (position.label in template: 11.U) Reactivity: nanU Position: 12 (position.label in template: 12.C) Reactivity: nanC Position: 13 (position.label in template: 13.G) Reactivity: nanG Position: 14 (position.label in template: 14.C) Reactivity: nanC Position: 15 (position.label in template: 15.C) Reactivity: nanC Position: 16 (position.label in template: 16.U) Reactivity: nanU Position: 17 (position.label in template: 17.G) Reactivity: nanG Position: 18 (position.label in template: 18.G) Reactivity: nanG Position: 19 (position.label in template: 19.G) Reactivity: nanG Position: 20 (position.label in template: 20.U) Reactivity: nanU Position: 21 (position.label in template: 21.G) Reactivity: nanG Position: 22 (position.label in template: 22.A) Reactivity: nanA Position: 23 (position.label in template: 23.A) Reactivity: nanA Position: 24 (position.label in template: 24.A) Reactivity: nanA Position: 25 (position.label in template: 25.C) Reactivity: nanC Position: 26 (position.label in template: 26.C) Reactivity: nanC Position: 27 (position.label in template: 27.G) Reactivity: nanG Position: 28 (position.label in template: 28.G) Reactivity: nanG Position: 29 (position.label in template: 29.U) Reactivity: nanU Position: 30 (position.label in template: 30.G) Reactivity: nanG Position: 31 (position.label in template: 31.A) Reactivity: nanA Position: 32 (position.label in template: 32.U) Reactivity: nanU Position: 33 (position.label in template: 33.G) Reactivity: nanG Position: 34 (position.label in template: 34.C) Reactivity: 0C Position: 35 (position.label in template: 35.C) Reactivity: 0C Position: 36 (position.label in template: 36.A) Reactivity: 0.5A Position: 37 (position.label in template: 37.U) Reactivity: nanU Position: 38 (position.label in template: 38.U) Reactivity: nanU Position: 39 (position.label in template: 39.G) Reactivity: nanG Position: 40 (position.label in template: 40.C) Reactivity: 0C Position: 41 (position.label in template: 41.C) Reactivity: 0C Position: 42 (position.label in template: 42.A) Reactivity: 0A Position: 43 (position.label in template: 43.A) Reactivity: 1A Position: 44 (position.label in template: 44.A) Reactivity: 1A Position: 45 (position.label in template: 45.C) Reactivity: 0C Position: 46 (position.label in template: 46.A) Reactivity: 0A Position: 47 (position.label in template: 47.A) Reactivity: 1A Position: 48 (position.label in template: 48.A) Reactivity: 0.5A Position: 49 (position.label in template: 49.C) Reactivity: 0C Position: 50 (position.label in template: 50.C) Reactivity: 0C Position: 51 (position.label in template: 51.C) Reactivity: 0C Position: 52 (position.label in template: 52.G) Reactivity: nanG Position: 53 (position.label in template: 53.U) Reactivity: nanU Position: 54 (position.label in template: 54.G) Reactivity: nanG Position: 55 (position.label in template: 55.U) Reactivity: nanU Position: 56 (position.label in template: 56.C) Reactivity: 0C Position: 57 (position.label in template: 57.G) Reactivity: nanG Position: 58 (position.label in template: 58.C) Reactivity: 0C Position: 59 (position.label in template: 59.G) Reactivity: nanG Position: 60 (position.label in template: 60.G) Reactivity: nanG Position: 61 (position.label in template: 61.C) Reactivity: 1C Position: 62 (position.label in template: 62.G) Reactivity: nanG Position: 63 (position.label in template: 63.G) Reactivity: nanG Position: 64 (position.label in template: 64.C) Reactivity: 0C Position: 65 (position.label in template: 65.G) Reactivity: nanG Position: 66 (position.label in template: 66.C) Reactivity: 0C Position: 67 (position.label in template: 67.G) Reactivity: nanG Position: 68 (position.label in template: 68.U) Reactivity: nanU Position: 69 (position.label in template: 69.G) Reactivity: nanG Position: 70 (position.label in template: 70.C) Reactivity: 0C Position: 71 (position.label in template: 71.C) Reactivity: 0.5C Position: 72 (position.label in template: 72.G) Reactivity: nanG Position: 73 (position.label in template: 73.A) Reactivity: 1A Position: 74 (position.label in template: 74.U) Reactivity: nanU Position: 75 (position.label in template: 75.G) Reactivity: nanG Position: 76 (position.label in template: 76.A) Reactivity: 1A Position: 77 (position.label in template: 77.G) Reactivity: nanG Position: 78 (position.label in template: 78.U) Reactivity: nanU Position: 79 (position.label in template: 79.A) Reactivity: 0.5A Position: 80 (position.label in template: 80.U) Reactivity: nanU Position: 81 (position.label in template: 81.G) Reactivity: nanG Position: 82 (position.label in template: 82.U) Reactivity: nanU Position: 83 (position.label in template: 83.G) Reactivity: nanG Position: 84 (position.label in template: 84.C) Reactivity: 0C Position: 85 (position.label in template: 85.G) Reactivity: nanG Position: 86 (position.label in template: 86.C) Reactivity: 1C Position: 87 (position.label in template: 87.G) Reactivity: nanG Position: 88 (position.label in template: 88.A) Reactivity: 0A Position: 89 (position.label in template: 89.A) Reactivity: 0A Position: 90 (position.label in template: 90.A) Reactivity: 0.5A Position: 91 (position.label in template: 91.A) Reactivity: 0.5A Position: 92 (position.label in template: 92.U) Reactivity: nanU Position: 93 (position.label in template: 93.C) Reactivity: 0C Position: 94 (position.label in template: 94.C) Reactivity: 0C Position: 95 (position.label in template: 95.G) Reactivity: nanG Position: 96 (position.label in template: 96.U) Reactivity: nanU Position: 97 (position.label in template: 97.G) Reactivity: nanG Position: 98 (position.label in template: 98.G) Reactivity: nanG Position: 99 (position.label in template: 99.A) Reactivity: 0A Position: 100 (position.label in template: 100.C) Reactivity: 0C Position: 101 (position.label in template: 101.G) Reactivity: nanG Position: 102 (position.label in template: 102.G) Reactivity: nanG Position: 103 (position.label in template: 103.G) Reactivity: nanG Position: 104 (position.label in template: 104.C) Reactivity: 0.5C Position: 105 (position.label in template: 105.G) Reactivity: nanG Position: 106 (position.label in template: 106.U) Reactivity: nanU Position: 107 (position.label in template: 107.G) Reactivity: nanG Position: 108 (position.label in template: 108.G) Reactivity: nanG Position: 109 (position.label in template: 109.G) Reactivity: nanG Position: 110 (position.label in template: 110.C) Reactivity: 0C Position: 111 (position.label in template: 111.A) Reactivity: 0.5A Position: 112 (position.label in template: 112.U) Reactivity: nanU Position: 113 (position.label in template: 113.U) Reactivity: nanU Position: 114 (position.label in template: 114.G) Reactivity: nanG Position: 115 (position.label in template: 115.G) Reactivity: nanG Position: 116 (position.label in template: 116.C) Reactivity: 0C Position: 117 (position.label in template: 117.G) Reactivity: nanG Position: 118 (position.label in template: 118.C) Reactivity: 1C Position: 119 (position.label in template: 119.U) Reactivity: nanU Position: 120 (position.label in template: 120.G) Reactivity: nanG Position: 121 (position.label in template: 121.C) Reactivity: nanC Position: 122 (position.label in template: 122.A) Reactivity: nanA Position: 123 (position.label in template: 123.A) Reactivity: nanA Position: 124 (position.label in template: 124.U) Reactivity: nanU Position: 125 (position.label in template: 125.C) Reactivity: nanC Position: 126 (position.label in template: 126.G) Reactivity: nanG Position: 127 (position.label in template: 127.G) Reactivity: nanG Position: 128 (position.label in template: 128.U) Reactivity: nanU Position: 129 (position.label in template: 129.G) Reactivity: nanG Position: 130 (position.label in template: 130.U) Reactivity: nanU Position: 131 (position.label in template: 131.A) Reactivity: nanA Position: 132 (position.label in template: 132.G) Reactivity: nanG Position: 133 (position.label in template: 133.U) Reactivity: nanU Position: 134 (position.label in template: 134.G) Reactivity: nanG Position: 135 (position.label in template: 135.C) Reactivity: nanC Position: 136 (position.label in template: 136.U) Reactivity: nanU Position: 137 (position.label in template: 137.C) Reactivity: nanC Position: 138 (position.label in template: 138.G) Reactivity: nanG Position: 139 (position.label in template: 139.G) Reactivity: nanG Position: 140 (position.label in template: 140.C) Reactivity: nanC Position: 141 (position.label in template: 141.G) Reactivity: nanG Position: 142 (position.label in template: 142.U) Reactivity: nanU Position: 143 (position.label in template: 143.U) Reactivity: nanU Position: 144 (position.label in template: 144.C) Reactivity: nanC Position: 145 (position.label in template: 145.U) Reactivity: nanU Position: 146 (position.label in template: 146.G) Reactivity: nanG Position: 147 (position.label in template: 147.C) Reactivity: nanC Position: 148 (position.label in template: 148.U) Reactivity: nanU Position: 149 (position.label in template: 149.G) Reactivity: nanG Position: 150 (position.label in template: 150.U) Reactivity: nanU Position: 151 (position.label in template: 151.3')3' 10 20 30 50 100


yqjC-yqjD-yqjE-yqjK



Position: 571-680, Conformation: #0







Retained alignments:


   NC_005126.1       ACU..C.G..UUCUAA.A.C.U..CAGCA.AUGC.CAGU.G......A...U...A...U..GG..UU..G...U.U..A.AG.A.A....AACAAAA...G..AUA.U.GG.C..GGGCCGU.GC.UGAUGU.......................................................CUA...CGU.U.CACGAUAAA......CCUUGG..GUA..AG.CA.U.C...GGU.AU.UG.GU...A...CUG....UU..GUCGGUGCCG..U.AU.UAG---.GUGU....AGU
   NC_006396.1       GG-..-.-..--CCUU.C.G.G..CGGCG.AAAU.CGUC.G......A...C...A...C..CA..UC..G...C.C..A.AG.G.A...cUACUCG-...-..---.-.--.-..-------.--.------cggacccgugccc.............................ggauucucgucaa---...---.-.---------......------..-CG..AG.GUcU.C...GGC.GC.UG.GC...G...AUG....CG..GUCGAUCAUG..C.AC.UUCGGG.UUCU....-CC
   NC_009380.1       CUG..C.G..UCUACG.C.C.C..GCGUC.UA--.----.-......-...C...G...C..CC..GC..U...U.C..-.--.U.A....CAUCCGC...-..GUC.C.GC.G..CCCGCGU.C-.------uacgcccgcuucuacau.....................acguagacguagacgcg-GG...CGC.G.GGCGUAGAA......GCGGAC..GCG..GA.CG.C.A...GAA.GC.GG.GC...G...U--....--..---------A..G.GC.GCGGAG.CCAG....CAG
   NC_009792.1       AGC..C.G..CAACCG.U.C.U..GGGCG.AAAC.CGGC.G......A...U...G...C..GA..UU..G...C.C..A.AA.C.A....AACCCGC...G..AAG.C.CG.C..AGCGCGC.GC.UGACGA.......................................................CUA...UGU.A.CGCGAGAAC......CCGUGG..ACG..GG.CG.U.C...GGC.AU.UG.GC...G...CAG....CC..GUUGGUGUGG..U.GC.UGGGCG.UACU....GCU
   NC_010571.1       CGC..A.A..CCCAUG.C.C.-..-GCCC.UGGC.CGAA.G......A...U...G...C..CG..AG..U...C.C..G.UA.G.A....CGAGCGC...G..CCG.C.UG.C..GGCGGGU.GU.AGCCGA.......................................................AUG...CCG.G.CAUGAAGAA......U-GCGG..UCG..CU.--.U.C...CGA.CU.CG.GC...G...CUGgcgcCA..UUCGGGGCGG..U.GG.C-GGUG.AUUU....GCG
   NC_010694.1       ACC..C.G..UUCUCG.C.U.U..GGGUG.AUUC.CGGU.G......A...A...C...G..CA..UC..G...C.G..C.AG.A.C....CACCCGU...G..AAG.C.GG.C..CGGUCGU.GC.UGACGU.......................................................UUA...CGU.G.CGUGAUAAU......CCCUGG..ACC..AG.CG.U.C...GGU.GU.CG.GU...A...CGG....CU..AUCGGGGUGG..U.GC.UGGGCG.UGCU....GCU
   NC_012560.1       GGC..G.G..CCAUCG.U.C.U..UCGG-.--GC.CGGC.G......A...U...G...C..CG..UC..G...A.C..G.AC.C.A....GGCCGGU...-..--G.C.GG.C..G------.--.------cugguagucgcgc.............................acggccuguucgg---...---.-.--------U......CUGCUC..GCC..AU.AG.U.G...GCC.GU.CG.GG...G...UAG....AG..GCCGGCG---..C.CC.AGGGCG.UUGA....GCU
   NC_012962.1       ACU..C.G..CUCUAA.G.C.U..CGGUA.AUGC.CAGU.G......A...U...A...U..GA..UC..G...U.U..A.AG.C.A....AACAAAA...G..AUA.U.GG.C..UGUCCGU.GC.UGAUGA.......................................................CUA...CGU.U.CACGAUAAG......CCAUGG..ACA..AG.CA.U.C...GGU.AU.UG.GU...A...CAG....CC..AUUGGCGCCG..U.AU.UAGGUG.UUUU....GUU
   NC_013961.1       ACC..C.G..CGCGCG.U.C.U..UAGCG.ACUC.CGGC.G......A...C...C...U..UA..UC..G...C.G..C.AA.A.C....AACGCGU...G..AUG.C.GG.C..CGGGCGU.GC.UGAUGU.......................................................UUA...UGU.G.CGCGAUAAC......CCCUGG..ACC..AG.CG.U.U...GGU.GU.CG.GU...G...CUG....CU..GUCGGGGUGG..U.AC.UGGGCG.UGCU....GCU
   NC_014306.1       -GC..-.G..CGCCCG.U.C.U..GGGUG.ACUC.UGGC.G......A...U...C...G..UA..UU..G...C.C..A.AA.A.C....CUCUCGC...G..AAG.U.GG.C..UGACCAC.GC.UGAUGU.......................................................CUA...UGU.G.CGUGAAAAU......CCAUGG..ACC..AG.CG.U.A...GGU.AU.CG.GU...G...CCG....CC..AUUGGUGUGG..U.AC.UGGGUG.UCUU....GCU
   NC_015730.1       AAC..C.G..UUUGGC.C.G.U..----A.GAGC.AGAA.A......G...G...C...G..CA..G-..-...-.-..A.AA.A.U....CACCGGU...G..CCG.U.CA.C..GGCGCGA.AU.-GAUGC.......................................................GUU...CUC.G.CGUGAAAAU......UGGCGG.cGCG..GG.CG.G.U...---.-U.UG.GG...C...AUG....UU..CGCCGCUUCG..A.--.--CCGC.UUUU....GAU
   NC_015968.1       AGC..C.G..UACCCG.C.C.U..GGGUG.AAAC.CGGU.G......A...U...G...C..UC..UG..G...C.G..A.AG.C.A....GACCCGC...G..AAG.C.GG.C..UGCACGC.GC.UGACGA.......................................................AUA...CGU.U.CGCGAUAAU......CCAUGG..ACU..GG.UG.U.A...GGC.AU.UG.GU...G...CCG....CU..GUUGGUGUGG..U.UC.UGGGUG.UCCU....GCU
   NC_017082.1       GGA..G.A..UCAUCA.C.C.U..CGGCA.AAGC.CGAU.G......A...U...G...G..CG..UU..G...-.-..-.--.-.-....-AGCGGC...G..U--.-.--.-..-GCGGAU.CU.CGUGGC.......................................................UGA...UCC.G.CGCCAGCAU......--GUCG..GC-..--.C-.U.U...GGC.GU.UG.GC...G...GCG....CC..GUCGGCGAGG..C.GC.CGCGCG.CUCU....UCA
   NC_017910.1       AGC..C.G..UGCCCG.C.C.U..GACCG.AAAC.AGGC.G......A...C...G...C..GA..UU..G...C.C..C.GC.C.A....GACCCGC...G..AGG.C.CG.C..CACCCGC.GC.CGAUGA.......................................................CUA...UGU.A.CAUGAAAAA......CCCUGG..GCC..GG.UG.U.C...GGU.AU.CG.GU...G...CCG....CA..GUGGGCCUGG..U.GC.UGGGUG.UAUU....ACU
   NC_021870.1       AGC..C.G..CUACCG.U.C.U..GGGCG.AAAC.AGGC.G......A...U...G...U..UA..UU..G...C.C..A.AA.C.A....AACUCGC...G..UCG.C.UG.C..GGCUCGC.GC.UGAUGA.......................................................UUA...UGU.G.CGCGAAAAC......CCCUGG..ACC..GG.GG.U.A...GGC.AU.UG.GC...G...CUG....CC..GUCGGUCUGG..U.GU.UGGGCG.UUCU....GCU
   NC_021921.1       ACA..C.C..-CAUCG.G.C.U..GGUCG.UA--.----.-......-...U...C...G..CA..GG..C...G.C..-.-U.C.G....ACCUGCG...A..CCG.U.CG.G..CGCGCGAaGU.CGAUGA.......................................................GUU...UGC.G.CGCG-----......UCGGCG..ACG..UG.AC.C.G...GCG.CU.CG.CG...A...UGG....C-..------GAUG..U.GG.UCGUCG.AUCU....UGU
   NC_022997.1       CAC..C.G..GGAUCG.G.C.A..CGUUG.AUGC.CGAC.C......A...U...G...C..CG..AC..C...U.C..A.--.-.-....-AUGCGG...U..CGG.C.GA.A..G------.--.------gugcg............................................ggccgu---...---.-.--------G......UCGCCG..UCG..CG.CG.U.-...GAA.GA.UG.GC...G...GUG....CC..GUUGGCGUAC..U.CG.UGGCUG.UUCAcgagGUU
   NZ_AP018164.1     CG-..C.U..UCAUCG.A.A.U..---CG.AAAC.CGUC.G......G...C...G...C..U-..-G..U...C.C..U.GG.A.U....--CCCGU...U..CGG.U.GG.C..GGCACCC.GC.CGGUGU.......................................................GUG...GGG.G.CGGC---GU......UCGCCA..ACA.uGG.AG.A.U...GGA.CG.UG.GU...G...CUG....CG..AACGGUGUUG..C.GG.CACUUG.ACCA....UCG
   NZ_AP018558.1     GGU..C.G..GCAGCG.G.C.-..-----.-AGC.CGGU.A......G...C...G...G..C-..-U..G...G.C..C.AA.A.U....AGCCGUC...G..AUC.U.CG.G..CGUCGGC.GU.CGGCGA.......................................................GCG...CCU.G.CGCGAUCAU......CGGGUC..AUC..GC.CG.A.U...GCC.AU.CG.CC...G...UCG....CG..GUCGGUCAG-..-.--.--AUCG.AUCA....GCC
   NZ_AP018817.1     AGG..C.C..-CACGG.C.C.U..GUGCG.AAAU.CGCC.A......U...U...G...C..CG..UC..G...G.C..G.AG.C.AucguGACCUU-...G..C--.C.GU.C..CGCGCCG.GC.CGACUU.......................................................GCCccaGGC.G.CCCA---UG......AC---G..-AA..GG.CG.U.C...GUU.GA.CG.GC...G...GUG....CA..GGCGAUUUCA..U.CC.ACGCCC.UUCG....CCU
   NZ_AP019007.1     AGC..C.G..CUACCG.C.C.U..GGGUG.AAAC.CGGC.G......A...U...G...C..GC..UG..G...C.G..A.AA.C.A....GACUCGC...G..AAG.C.GG.C..GGCGCGC.GC.UGACGA.......................................................AUA...UGU.C.CGUGAUAAC......CCAUGG..ACG..GG.CG.U.U...GGU.AU.CG.GU...G...CCG....CC..GUAGGUGUGG..U.AC.UGGGUG.UUCU....GCU
   NZ_AP019630.1     AGC..C.G..CUAUCG.C.C.U..GGGUG.AAAC.CGGU.G......A...U...G...C..GC..UG..G...C.G..A.AA.C.A....GACCCGC...G..AAG.C.GG.C..UGCGCGC.GC.GGACGA.......................................................AUA...UGU.G.CGUGAUAAU......CCAUGG..ACG..GG.UG.U.A...GGG.AU.UG.GU...G...CCG....CA..GUGGGUGUGG..U.AC.UGGGUG.UCCU....UCU
   NZ_AP021861.1     GCG..C.G..CCGCCG.G.C.G..GAGUG.AUA-.----.A......A...A...G...C..CA..CC..G...G.C..-.--.U.C....UGCCGGU...-..GGA.C.G-.-..-AAGUG-.GG.AGCUGA.......................................................CCG...CAC.G.UUCGUU---......GCGUCC..ACC..GG.CG.G.A...GCC.GG.UG.GC...U...UGG....AU..---GGUUUAG..C.GC.UCGGCG.UUCUa.acCGC
   NZ_AP022508.1     AGC..C.G..CUACCG.C.C.U..GGGUG.AAAC.CGGU.G......A...U...G...C..AC..UG..G...C.G..A.AA.C.A....GACCCGU...G..AAG.C.GG.C..UGCGCGU.GC.AGAUGA.......................................................AUA...UGU.G.CGCGACAAU......CCAUGG..ACG..GG.AG.U.U...GGU.AU.UG.GU...G...CCG....CA..GUGGGUGUGG..U.GC.UGGGUG.UCCU....GCU
   NZ_AP022547.1     AGC..C.G..UGUUCG.C.C.U..GGGUG.AAAC.CAGC.G......A...U...G...C..UC..U-..-...C.CugA.AG.C.A....AACGCGA...G..AAA.C.CG.C..UGCGCAU.GC.AGAUGA.......................................................AUA...CGU.C.CGUGAAAAC......CCCUGG..ACC..GG.CG.U.G...GGA.AU.UG.GU...G...CUG....CC..GUCGGGCUGG..U.AC.UGGGUG.UCCU....GCU
   NZ_AP022610.1     AGC..C.U..UUC-CG.G.GcC..GGAGG.GUCU.GGCC.U......A...C...A...C..CG..AC..G...U.C..G.AC.G.A....GCCG---...-..---.-.--.-..-------.--.------gccggcga......................................uggcauggu---...---.-.---------......------..---..CGuCG.U.C...GAC.GU.CG.GU...G...CGG....CC..G---GGGUCG..C.CU.UCCCCG.AUCU....GCU
   NZ_AP023184.1     AGC..C.G..UGUGCG.C.C.U..GGGUG.AUAC.UGGU.G......A...U...G...U..AA..UU..G...C.C..A.AA.C.A....AACCCGA...G..AAG.C.GG.C..GGCAAAA.GC.UGACGA.......................................................UUA...CGU.U.CGUGAAAAU......CCAUGG..ACU..GG.CG.U.U...GGU.AU.UG.GG...G...CGG....CG..AUUGGCGUCG..U.GC.UCGGUG.UCCU....ACU
   NZ_AP023439.1     CGC..G.G..UCAUCG.C.C.A..CGGCG.UAUC.CGGU.G......U...U...G...C..CC..GC..G...U.C..G.AG.C.C....AGCC---...-..---.-.--.-..-------.--.------ggucaccag.....................................gaucacgag---...---.-.---------......------..---..GG.UG.G.C...GAC.GA.GG.GC...G...CCC....AU..GCCGAUGUUG..C.AC.AGGGCG.GU-G....GCG
   NZ_CP006568.1     AUAccC.G..CAGCCG.U.C.U..UGGCG.AUGG.CGGC.G......A...G...C...G..UC..UG..G...C.G..G.AG.C.A....AACCCGC...G..UAG.U.GGcC..AGUAAG-.GC.AGAUGA.......................................................AUA...CGU.A.CACGAAUAU......CCUUGG..GCG..GG.CA.U.U...GGC.GU.UG.GC...G...CCG....UG..GUCGGCUUUA..U.CC.UCGGUG.CACU....UAU
   NZ_CP006569.1     AUA..C.GcgCAGCCG.U.C.U..UGGCG.AUGG.CGGC.G......A...G...C...G..CU..UG..G...C.G..G.AG.C.A....AACCCGC...G..UGG.U.GGcC..AGUAAG-.GC.AGAUGA.......................................................AUA...CGU.A.CACGAAUAU......CCUUGG..GCG..GG.CA.U.U...GGC.GUuGG.CG...C...-CG....UG..GUCGGCUUUA..U.CC.UCGGUG.CACU....UAU
   NZ_CP006664.1     AGC..C.G..UGAGCG.C.C.U..GAGUC.AGGC.CGGU.G......A...A...A...A..CG..UG..G...C.G..A.CC.C.A....GACACGA...G..AAA.U.GG.C..CGGGCGA.GC.CGAUGA.......................................................CUA...UGU.C.CGGGAUAAC......CCCUGG..ACC..GG.CG.U.U...GGC.AU.CG.GC...G...CCG....CC..GUCGGCGUAG..U.GC.UUGGCG.UGCU....GCU
   NZ_CP008782.1     CGU..C.G..UGAUUG.C.U.-..----G.AUGC.CGAA.G......A...A...C...U..CG..UU..G...U.C..G.AA.G.C....AUUCGAU...G..UCG.C.GU.A..UGCGCCC.GC.CGA---cgggca...........................................cguacuGCG...-GC.G.ACUUCAGAU......GCGCGG.gAUC..GA.CG.C.C...GGC.GU.CG.AG...CaguUCC....UG..CUCGGUGUAG..CgCU.CCAGCG.AACA....ACG
   NZ_CP009125.1     ACU..C.G..CAGCCG.C.C.U..GAGCG.AUAC.CGGU.G......A...G...C...G..CA..UC..G...C.U..U.CG.C.A....AACCAAA...G..AAG.C.GG.U..UGAAUCU.GC.CGACGA.......................................................UUA...UGU.A.CGUCAGAAC......CCGUGG..ACC..GG.UG.U.C...GGC.AU.UG.GC...G...CAG....CA..GUCGGUGUCG..U.GC.UUGGCG.UCCU....ACU
   NZ_CP009712.1     AGC..C.G..CU----.-.-.U..GAGUG.ACCA.CGGUgG......A...U...G...U..CA..-U..A...U.C..A.AG.C.A....GAUAAAA...G..CCA.U.GG.C..AUGUUGU.AC.UGAUGA.......................................................UUA...UGU.U.CGUCAGAAC......CCAUGG..UGU..AG.CG.U.G...GGU.AU.UG.GC...G...CGA....CU..AUUGG-----..-.AC.UGAUUG.UUGG....GCU
   NZ_CP009781.1     ACG..C.G..CGAGCG.C.U.U..GAGCG.AAAC.CGGU.G......A...C...A...G..AA..UC..G...C.G..G.CU.C.A....AAGCAGA...G..AAA.U.UG.C..UGAUAAA.GC.UGACAC.......................................................UUA...UGU.U.CGUGACAAC......CCGUGG..ACU..GG.CG.U.A...GGU.AU.UG.GU...G...CUG....CG..GUUGGUGUGG..U.GU.UGGGCG.UUCU....GUU
   NZ_CP009787.1     ACU..C.G..UGAGCG.U.C.U..GAGUG.AAAC.UGGC.G......A...U...AgaaU..CG..CU..G...C.U..-.--.C.A....AACCA--...-..---.-.--.-..-------.--.------aagaaauugcugauaaag...................cugacacuuauguccaug---...---.-.----ACAAU......CCUUGG..ACU..GG.CG.U.U...GGU.AU.CG.GU...G...CCG....CU..GUCGGCGUGG..U.GU.UAGGCG.UUCU....GUU
   NZ_CP011125.1     CGG..-.-..--AUCG.A.G.C..GAGUU.GUACuCGUG.G......A...U...C...A..CG..UC..G...C.C..G.AG.G.A....CGAACGC...-..---.-.--.-..-GCGCGC.GA.U-----gggcaugucgag..............................cgcguggaugcgaUCG...CGC.G.CGCCGAC--......---GAG..GCG..CU.CG.U.U...CGC.GG.CG.AG...G...AUC....GA..CGCGGUGUCG..A.GC.UCGCCG.UUCU....CCG
   NZ_CP011568.3     CGU..C.G..AUC-UG.A.G.C..ACGCG.CUUU.GGCG.G......U...C...G...-..--..-C..G...C.G..G.AU.C.A....AAUCCUG...G..C-G.C.GC.A..UGGCCGC.GU.UCAU--.......................................................GCG...CGA.C.CGCGAGCAA......GCGCAG..CAG..GA.AC.U.G...U-C.GU.--.-C...G...CUG....UC..CUCCGAGACG..C.GC.GUCUCG.GC--....AUG
   NZ_CP011602.1     AGU..C.G..CUAUCG.U.C.U..GGGCG.AAAC.GGGU.G......A...U...G...C..UA..UU..G...C.C..C.GC.C.A....GACCCGG...G..AGG.C.CG.C..UGCAAGA.AC.CGACGA.......................................................AUA...UGU.A.CGUGAAAAC......CCAUGG..GCC..AG.CG.U.G...GGC.AU.UG.GC...G...CGG....CG..AUUGGCGUCG..U.GC.UGGGCG.UGCU....CCU
   NZ_CP012257.1     ACC..C.G..UUAUCA.C.U.U..AACUG.AAAC.CGGU.G......A...U...G...U..GA..UU..G...C.C..A.AA.C.A....GACCCGC...G..AAG.C.GG.C..GGCGCGU.GC.GGAAGA.......................................................UUA...UGU.G.CGUGAAAAU......CCGUGG..ACC..GG.CG.U.G...GGU.AU.CG.GU...G...CGG....CC..AUCGGCGUCG..U.GC.UGGGCG.UGCU....CCU
   NZ_CP012264.1     ACC..C.G..CUAUCA.C.U.U..AACCG.AAAC.CGGC.G......A...U...G...U..GA..UU..G...C.C..A.AA.C.A....GACCCGU...G..AAG.C.CG.C..GGCGCGC.GC.AGAAGA.......................................................AUA...UGU.G.CGUGAAAAU......CCGUGG..ACU..GG.CG.U.A...GGU.AU.CG.GU...G...CGG....CU..AUUGGCGUCG..U.GC.UGGGCG.UACU....GCU
   NZ_CP012266.1     ACU..C.G..CUAUCA.C.U.U..AACCG.AAAC.CGGU.G......A...C...G...U..GA..UU..G...C.G..A.GA.C.A....GACCCGC...G..AAG.C.CG.C..GGCGCGC.GC.GGAAGG.......................................................UUA...CGU.G.CGUGAAAAU......CCGUGG..ACC..GG.CG.U.A...GGU.AU.UG.GU...G...CGG....CC..AUUGGUGUCG..U.GC.UGGGCG.UACU....GCU
   NZ_CP012268.1     ACU..C.G..CUAUCA.C.U.U..AACCG.AAAC.CGGC.G......A...U...G...U..GA..UU..G...C.C..A.AA.C.A....GACCCGU...G..AAG.C.CG.C..GGCGCGU.GC.GGAAGA.......................................................UUA...CGU.G.CGUGAAAAC......CCGUGG..ACC..GG.CG.U.A...GGU.AU.CG.GU...G...CGG....CC..AUCGGCGUCG..U.GC.UGGGCG.UACU....GCU
   NZ_CP012746.1     GGC..A.A..CCAGCA.U.C.U..CGGCG.AGCG.CGGC.G......C...C...G...C..GU..UU..G...C.C..U.AU.-.-....-------...-..ACG.G.GC.C..GGUUCGC.GC.CGAC--.......................................................GCG...CGA.U.CGC---AAU......GCCUGG..A--..--.--.G.C...GGC.AU.GC.GC...G...AGA....CC..GUCAGCACGG..C.GC.UCGGUU.AUCC....GCU
   NZ_CP012871.1     AGC..C.G..UAACCG.C.C.U..GGGCG.AAAC.CAGC.G......A...C...G...C..CA..UU..G...C.C..A.AA.C.A....GACCCGC...G..AAG.C.CG.C..UGCCCGC.GC.CGAUGA.......................................................GUA...CGU.A.CAUGACAAC......CCGUGG..ACC..GG.CG.U.U...GGC.AU.CG.GC...G...CGG....CC..GUCGGCCUGG..U.GC.UGGGCG.UACU....GCU
   NZ_CP013940.1     ACC..C.G..UUAUCA.C.U.U..AACCG.AAAC.CGGU.G......A...C...G...U..CA..UC..G...C.U..A.AA.C.A....GACCCGC...G..AAG.C.GG.C..GGCGCGU.GC.GGAAGA.......................................................UUA...UGU.G.CGUGAAAAU......CCGUGG..ACC..GG.CG.U.G...GGU.AU.UG.GU...G...CGG....CC..AUCGGCGUCG..U.GC.UGGGCG.UGCU....CCU
   NZ_CP013990.1     AGC..C.G..CUACCG.U.C.U..GGGCG.AAAC.CAGC.G......A...U...G...U..GC..UG..G...C.G..A.AA.C.A....GACCCGU...G..AAG.C.CG.C..UGCGCGC.GC.CGAUGA.......................................................GUA...CGU.C.CGUGAAAAU......CCGUGG..GCC..GG.GG.U.A...GGU.AU.CG.GU...G...CUG....CG..GUGGGCGUCG..U.CA.UCGGCA.UGCU....CCU
   NZ_CP014007.2     AGC..C.G..UCAUCG.C.C.U..CGGCG.AAAC.GGGU.G......A...U...G...U..UA..UU..G...C.C..A.AA.C.A....AACACGU...G..AAG.C.CG.C..CGCGCGU.AC.UGAUGA.......................................................AUA...UGU.C.CGCGAAAAC......CCAUGG..GCC..AG.UG.U.A...GGC.AU.CG.GC...G...CCG....CU..AUUGGGGUGG..U.GU.UGGGCG.UGCU....GCU
   NZ_CP014070.2     AGC..C.G..CUAUCG.C.C.U..CGGUG.AAAC.GGGU.G......A...U...G...C..CA..UU..G...C.U..A.AA.C.A....GACUCGU...G..AAG.C.CG.C..UGCGCGU.GC.UGACGA.......................................................CUA...UGU.G.CGCGAAAAU......CCGUGG..ACC..GG.CG.U.C...GGG.AU.UG.GU...G...CGG....CC..GUGGGCGUCG..U.GC.UGGGCG.UUCU....GCU
   NZ_CP014137.1     AAC.aC.G..CUCUCG.U.C.U..GAGUG.AAAC.CGGU.G.....aA...C...G...CauCG..CG..A...C.C..-.--.C.A....UACCCGU...G..AAG.C.GG.U..GGGAUGC.GC.AGACGA.......................................................UUA...UGU.U.CGUGAAAAU......CCGUGG..ACU..GG.CG.U.A...GGU.AU.CG.GC...G...CGG....CA..AUUGGCGUUG..U.GA.UUGGCG.UCCU....GCU
   NZ_CP015613.1     AGU.gA.G..GUAAAG.U.C.G..CGGCU.-GAC.UGAC.A......C...C...A...C..CG..AG..U...C.C..U.AC.U.A....UGCUCGG...G..CCA.A.GG.A..UGC----.--.------cguuugccgcac...............................cgacggcuacgu---...---.G.CGUGAAAAA......CCCUGG..CAC..AG.CG.U.A...GGC.AU.UG.GC...G...CCA....CG..GUCGGUUUGG..U.GC.UGGGCU.UGUU....GCU
   NZ_CP015750.1     ACC..C.G..CAGUCG.C.U.U..GAGCG.AUAC.CGGU.G......A...G...C...G..CA..UC..G...C.A..-.--.-.-....-UCCCAA...A..CCA.A.AG.A..AGC-CGU.UG.------aaucag..........................................cggaugaCUA...UGU.G.CGCCAGAAC......CCGUGG..ACG..GG.UG.U.C...GGC.AU.UG.GC...G...CAG....CA..GUCGGCGUCG..U.GC.UUGGCG.UCCU....GCU
   NZ_CP016094.1     AUC..U.C..AGGUCG.C.G.C..GGUCG.UAGC.UGGC.G......A...-...-...-..--..-G..C...G.U..G.AU.C.A....GACCCUC...C..---.-.--.G..GCGGGGU.GC.CGGCGA.......................................................GCA...CCC.G.GGCGAUGUU......G---GC..GAG..GG.CA.U.G...GCC.G-.--.--...-...CCG....CA..AUCGGCGUAG..C.GG.UCGGCG.GUCG....GAC
   NZ_CP016337.1     AGC..C.G..UCACCG.U.U.U..GGGCG.AAAC.CGGC.G......A...U...G...C..AC..UC..G...C.C..C.GC.C.A....AACCCGC...G..AAG.C.GG.C..UGCGCGU.AC.CGACGA.......................................................GUA...UGU.G.CGUGACAAC......CCGUGG..GCC..AG.CG.U.A...GGU.AU.CG.GC...G...CCG....CC..GUCGGUGUGG..U.UC.UGGGCG.UACU....GCU
   NZ_CP016440.1     GGC..A.G..CAUCGU.G.C.U..GCG--.-CGC.CAGC.A......A...U...G...C..CC..AG..G...G.C..G.AC.C.A....GAGCCGC...-..GAG.C.UG.A..CCCGGC-.--.------cauaugucg....................................acgagguggu---...GCU.G.GGCGAUAUG......CAGGUC..GUG..GU.GC.U.G...GCC.AU.-G.GC...G...CCG....CA..GCCGGCGGAC..-.-C.GCGCGC.UCAU....GCU
   NZ_CP016948.1     ACC..C.G..CGCUCG.C.C.U..GAGCG.ACGC.CGGU.G......A...Ca.gG...C..UGgcUU..C...G.C..A.AAcC.A....AACAGA-...-..UCGcC.GG.C..C----AA.GC.CGACGA.......................................................CUA...CGU.G.CGCGACAAC......CCGUGG..ACC..GG.CA.U.C...GGU.AU.CG.GC...G...CGG....CG..GUCGGCGUGG..U.GC.UGGGCG.UGCU....GCU
   NZ_CP017184.1     AGC..C.G..CUAUCG.C.C.U..GGGUG.AAAC.CGGC.G......A...U...G...C..GC..UG..G...C.A..A.AA.C.A....GACCCGC...G..AAG.C.GG.C..CGCGCGU.GC.GGACGA.......................................................AUA...CGU.G.CGUGAUAAU......CCAUGG..ACG..GG.UG.U.C...GGA.AU.UG.GU...G...CCG....CA..GUCGGUGUGG..U.AC.UGGGUG.UCCU....GCU
   NZ_CP017279.1     AGC..C.G..UUAUCG.C.C.U..GGGUG.AAAC.CGGU.G......A...U...G...C..AC..UG..G...C.G..A.AA.C.A....GACCCGC...G..AAG.C.GG.C..AGCUCGC.GC.GGACGA.......................................................AUA...UGU.U.CGCGAUAAU......CCGUGG..ACG..GG.UG.U.A...GGG.AU.UG.GU...G...CCG....CG..GUAGGUGUGG..U.AC.UGGGUG.UCCU....GCU
   NZ_CP017482.1     ACU..C.G..CAGUCG.C.C.U..GAGCG.AUAC.GGGU.G......A...G...C...G..CA..UC..G...C.U..U.CC.C.A....AACCAAA...G..AAG.C.GG.U..UGAAUCG.GC.GGACGA.......................................................UUA...UGU.A.CGCCAGAAU......CCGUGG..ACC..GG.UG.U.C...GGC.AU.UG.GC...G...CAG....CA..GUCGGUGUCG..U.GC.UUGGCG.UCCU....GCU
   NZ_CP019038.1     GGC..U.G..----CG.U.A.A..AACUG.AAGU.CGGC.G......C...C...G...C..CG..UG..G...C.C..C.--.-.-....-------...-..---.-.--.-..-------.--.------caaucgcuuucccagccgcgguucca..gcccuccaccagcacaccgcggaagcc---...---.-.---------......------..---..--.--.-.-...GUU.CG.CG.GC...G...GCG....AA..GUCGAUGUAG..C.GC.UUGACG.UUC-....GCC
   NZ_CP019327.1     GAC..G.G..CGCUCG.A.G.G..ACGCU.UCGU.CGGU.G......A...C...G...C..CG..UC..G...C.C..G.AA.G.A....CGAACGC...G..UCG.U.CG.A..AGCGCUC.GU.CG----.......................................................ACG...AGG.C.CGUCGAUCU......CGACCU..GCG..--.CG.U.C...GGC.GA.CG.GU...G...UCG....GA..UUCGUCGUCC..G.GC.--CCCG.CCUC....GUC
   NZ_CP020100.1     CAG..U.U..CCAGCG.C.U.G..CCGAG.ACCC.CGGU.A......A...A...G...C..CA..CC..G...C.C..G.AC.G.A....UACAGAC...G..UCG.G.CG.C..GGCGCUC.GC.CG----.......................................................CUG...AGC.G.CUGGA--UG......CGCCGG..UGC..UG.AA.U.G...GGC.AC.UG.GC...-...CUG....AU..ACCAGGUAGG..U.U-.-GAGCG.AUCA....UAG
   NZ_CP020335.1     ACU..C.G..UUUUAA.A.C.U..CGGUA.AUGC.CAGC.G......A...U...A...U..GG..UU..G...U.U..A.AG.A.A....AACAAAA...G..AUA.U.GG.C..GGGCCGU.GC.CGAUCU.......................................................CUA...CGU.U.CAUGAUAAA......CCGUGG..ACA..AG.CA.U.C...GGU.AU.AG.GU...A...CUG....CG..GUUGGUGCCA..U.AU.UAGGUG.UAUU....AUU
   NZ_CP020388.1     AGC..C.G..CUAUCG.C.C.U..GGGUG.AAAC.CGGC.G......A...C...G...C..UA..UU..G...C.U..A.AG.C.A....AACCCGC...G..AAG.C.UG.C..GGCCCGC.GC.CGACGA.......................................................AUA...CGU.U.CGCGAUAAU......CCGUGG..CAG..GG.CG.U.G...GGU.AU.CG.GC...G...CCG....CU..GUGGGUCUGG..U.GC.UCGGCG.UUCU....GCU
   NZ_CP023465.1     --C..C.A..UGCAUG.C.GcA..GUGUG.AAAG.CCGC.G......A...U...C...C..AU..CU..G...U.U..U.-G.C.G....U----UC...G..CCG.C.CG.C..GGUGUGC.GC.-GACGA.......................................................GUG...CGC.G.CGCGGA-AC......CGGCGG..G--..--.--.C.G...AAC.GG.AU.GU...U...CGG....CG..GCGAC-GUGC..U.GC.GCUGCG.CAUC....GCA
   NZ_CP023525.1     AGC..C.G..UGACCG.C.C.U..CGGUG.AAAC.CAGC.G......A...A...G...C..CA..UC..G...C.C..A.AA.C.A....AACCCGC...G..AAG.C.CG.C..AGCCAAA.GC.GGAUGA.......................................................UUA...UGU.C.CGCGAGAAC......CCGUGG..ACC..GG.CG.U.A...GGC.AU.UG.GC...G...CUG....CG..GUCGGCGUCG..U.GC.UGGGUG.UGCU....GCU
   NZ_CP023567.1     ACU..C.G..CGCUCG.U.C.U..UGGCG.ACUC.UGGC.G......A...C...C...U..UA..UC..G...CgC..A.AA.C.A....-ACGCGU...G..AAG.C.GG.C..CGGGCGU.GC.UGAUGU.......................................................UUA...UGU.G.CGCGAUAAC......CCCUGG..ACC..AG.CG.U.G...GGU.GU.CG.GU...G...CUG....CU..GUCGGGGUGG..U.AC.UGGGCG.UGCU....GCU
   NZ_CP023706.1     AGC..C.G..CGAGCG.U.C.U..GAGCC.AGGC.CGGC.G......A...G...A...A..UG..UC..G...C.C..A.CC.C.A....GACCCGC...G..AAA.U.GG.C..UGGUCGU.GC.CGAUGA.......................................................CUA...CGU.G.CGUGACAAC......CCGUGG..ACC..GG.UG.U.C...GGC.AU.CG.GC...G...CUG....CC..GUGGGCGUGG..U.AC.UCGGCG.UACU....GUU
   NZ_CP023865.1     AUC..G.G..UCAACA.C.C.C..GGGUG.GAGG.CGGU.G......C...G...C...G.cCG..AC..G...U.C..G.AG.C.A....GACCCGC...G..AC-.-.--.-..-------.--.------gcc.................................................gcg---...---.-.---------......----GU..GCG..GA.UGaU.G...GUC.GU.CG.CG...C...UGG....CC..CUCGCGGUGG..U.GC.UCGGGG.UGCU....GAU
   NZ_CP026377.1     -CG..C.G..CCUGCG.C.C.U..UGGCG.AAAC.CGGC.G......A..uC...G...U..C-..-U..G...U.C..G.CA.G.Ac..cACCCG-C...G..AAG.C.GG.U..AGGCCGC.GC.CGACGA.......................................................UUA...CGU.G.CGUGAGAAU......CCAUGG..CAC..GG.CG.U.C...GGC.AU.CG.GC...G...CAG....CG..GUGGGUCUGG..U.GC.UUGGCA.UGCU....GGU
   NZ_CP027107.1     ACU..C.G..UUAUCA.U.U.U..AACCG.AAAC.CGGU.G......A...U...G...U..GA..UU..G...C.C..A.AA.C.A....GACCCGC...G..AAG.C.GG.C..GGCGCGU.GC.CGAAGA.......................................................UUA...UGU.G.CGUGAAAAU......CCGUGG..ACC..GG.UG.U.G...GGU.AU.UG.GU...G...CGG....CC..AUUGGCGUCG..U.GC.UGGGCG.UGCU....CCU
   NZ_CP027260.1     ACC..C.G..CAGCCG.C.C.U..GAGCG.AUAC.CGGU.G......A...G...C...G..CA..UC..G...C.A..U.CC.C.A....AACCAAA...G..AAG.C.CG.U..UGAAUCA.GC.GGAUGA.......................................................CUA...UGU.G.CGCCAGAAC......CCGUGG..ACU..GG.UG.U.C...GGC.AU.UG.GC...G...CAG....CA..GUCGGCGUCG..U.GC.UUGGCG.UCCU....ACU
   NZ_CP027986.1     AGC..C.G..CUAUCG.C.C.U..GGGUG.AAAC.CGGU.G......A...U...G...C..AC..UG..G...C.A..A.AA.C.A....GACCCGC...G..AAG.C.GG.C..UGCCCGU.GC.UGACGA.......................................................AUA...CGU.G.CGUGAUAAU......CCAUGG..ACG..GG.UG.U.C...GGG.AU.UG.GU...G...CCG....CA..GUCGGUGUGG..U.AC.UGGGUG.UCCU....UCU
   NZ_CP028271.1     AUC.cC.G..UCAGCG.U.C.U..GGGCG.AAAC.CGGC.G......A..uC...G...A..C-..-U..G...U.CgcA.GA.C.G....ACGCGUG...A..-AG.C.GG.U..AGGCCGC.GC.CGACGA.......................................................UUA...CGU.G.CGUGAGAAU......CCGUGG..CAU..GG.CG.U.G...GGC.AU.CG.GC...G...CCG....CC..GUUGGUCUGG..U.CA.UCGGCA.UGCU....GAU
   NZ_CP029185.2     ACU..C.G..UACCCG.C.U.U..AACUG.AAAC.CCGC.G......G...C...A...A..AA..UU..G...U.U..G.AC.C.A....AACCAAA...G..AAA.U.CG.C..UGAUAAA.GC.CGAC-A.......................................................GCU...AUG.UgCAUGAAAAA......CCAUGG..GCU..GG.CG.U.C...GGU.AU.CG.GU...G...CGG....CA..GUUGGUGUGG..U.GC.UUGGCG.UACU....GUU
   NZ_CP033744.1     AGC..C.G..CCAUCG.U.C.U..GAGUG.AAAC.CAGC.G......A...U...G...U..GA..UU..G...C.C..A.AA.C.A....GACCCGU...G..AGG.C.CG.C..GGCUAAA.GC.CGAUAA.......................................................CUA...CGU.G.CGCGAAAAC......CCAUGG..ACA..GG.CG.U.C...GGC.AU.UG.GC...G...CUG....CA..GUCGGUGUGG..U.GC.UUGGUG.UACU....ACU
   NZ_CP033844.1     AGC..C.G..UGUUCG.C.C.U..GGGUG.AAAC.CAGC.G......A...U...G...C..CC..UC..A...U.G..A.AG.C.A....AACGCGA...G..AAA.C.CG.C..GGCGCGU.GC.AGAUGA.......................................................AUA...CGU.C.CGUGAAAAC......CCGUGG..ACC..GG.CG.U.G...GGA.AU.UG.GU...G...CUG....CC..GUCGGGCUGG..U.GC.UGGGUG.UCCU....GCU
   NZ_CP034035.1     ACC..C.G..GUCCCG.C.C.U..GAGCG.AUAC.UGGC.G......A..aC...G...-..CA..UU..G...C.C..A.GC.C.A....GACUCGU...G..AAG.C.CG.U..GGGAUAU.GC.CGAUGA.......................................................UUA...UGU.U.CGUGAAAAU......CCGUGG..ACA..GG.CG.U.U...GGU.AU.CG.GC...G...CAG....CA..GUGGGUGUUG..U.GC.UUGGUG.UUCU....UCU
   NZ_CP034036.1     ACC..C.G..UUCCCG.C.C.U..GAGCG.AUAC.CGGU.G......A...G...A...A..AA..UC..G...C.C..U.CC.C.A....GACUCGU...G..AAG.C.GG.U..GGGAUAU.GC.CGACGA.......................................................UUA...UGU.G.CGUGAAAAU......CCGUGG..ACC..GG.CG.U.U...GGU.AU.CG.GU...G...CCG....CG..GUGGGUGUGG..U.GC.UUGGCG.UCCU....GCU
   NZ_CP034593.1     UGC..C.G..CUUUCG.C.U.U..GCGGC.AAGG.CCGGuA......A...C...G...C..CG..UU..G...A.U..U.CA.A.G....AA-----...G..UAG.C.UG.C..CGCGGGU.CC.UUUGCU.......................................................GGA...CCC.G.CGUAGGUGC......CAGCCU..C-A..A-.-A.C.A...CUC.CG.CG.GC...G...ACU....CAcgCCGGCUGAUG..G.CCuGCGGCG.CACU....GAU
   NZ_CP034752.1     ACC..C.G..UACCCG.C.C.U..GACCG.AAAC.CAAA.G......G...C...A...A..AA..UU..G...U.U..G.AC.C.A....AACUAAA...G..AGA.U.UG.C..CG-----.--.------auaaagcuga...................................caccuaugug---...---.-.CAUGAAAAA......CCAUGG..GCU..GG.CG.U.A...GGC.AU.CG.GU...G...CUG....CA..GUUGGUCUGG..U.GC.UUGGCG.UACU....GUU
   NZ_CP034938.1     ACC..C.G..CAGUCG.C.C.U..GAGCG.AUAC.GGGU.G......A...G...C...G..CA..UC..G...C.U..U.CC.C.A....AACCAAA...G..AAG.C.AG.U..UGAAUCU.GC.GGACGA.......................................................UUA...UGU.A.CGCCAGAAC......CCGUGG..ACU..GG.UG.U.C...GGC.AU.UG.GC...G...CAG....CA..GUCGGUGUCG..U.GC.UUGGCG.UCCU....GCU
   NZ_CP035704.1     ---..G.U..UUUCUG.C.AaU..UGCUG.AUGCaCGUG.G......A..uU...G...G.cGU..GC..C...G.C..A.UU.C.G....AUGCGGC...G..ACG.C.U-.-..GGCGCGC.GC.GGAUGC.......................................................GUG...UGU.G.CGCGAACAU......C-GCGU..GUC..GC.AA.C.U...GCG.UU.AC.CC...G...GAG....UC..-CGCGCGCGG..C.AG.CUUGCA.AGGU....GUG
   NZ_CP036175.1     AGC..C.G..CGUUCG.U.U.U..GGGAG.AAAC.CAGC.G......A...C...G...C..CA..UU..G...U.G..A.AG.C.A....AACGCGC...G..AAA.C.CG.C..UGCUCGC.GC.CGAUGA.......................................................AUA...CGU.C.CGCGAAAAU......CCGUGG..ACC..GG.CG.U.C...GGA.AU.UG.GC...G...CAG....CU..GUCGGAUUGG..U.GC.UGGGUG.UUCU....GCU
   NZ_CP036402.1     CGG..G.A..UGUUCG.C.C.U..GGCU-.--GC.UGAU.C......A...C...G...C..CG..GC..G...A.U..G.AU.C.-....AUCCUGC...U..GGG.C.UUcA..GCGUCCU.GC.CGAUGA.......................................................UCA...CGA.C.GAUCUGGAC......GAGCCU..GCA..GG.AGcC.G...GGC.AU.CG.GC...G...CUU....CG..AUCGGC----..-.--.CCGGCC.AACU....ACG
   NZ_CP037864.1     AGC..C.G..CCAUCG.U.C.U..GAGCG.AAAC.CAGC.G......A...U...G...U..GA..UU..G...C.C..A.AA.C.A....GACCCGU...G..AGG.C.CG.C..GGCUAAA.GC.UGAUAA.......................................................CUA...CGU.G.CGCGAAAAU......CCAUGG..ACA..GG.CG.U.C...GGC.AU.UG.GC...G...CUG....CA..GUCGGUGUGG..U.GC.UUGGUG.UACU....GCU
   NZ_CP037948.1     CUA..C.G..CGGUUG.C.G.C..UGGGC.AAGG.CGGU.G......G...U...G...G..CG..AC..G...C.C..-.--.C.U....AUAUCCA...U..GCA.C.GC.-..-------.--.------gaacuccucgc.................................aaacgaugucg---...---.-.---------......GCGUGC..UGG..-U.CG.A.GcccGGC.GA.UG.CC...G...GUG....CG..AUCGCCGAAGcgG.UC.UGCGCA.UUGC....UCG
   NZ_CP038469.1     AGC..C.G..CAAUCG.U.C.U..GGGUG.AAAC.CAGC.G......A...U...G...U..GA..UC..G...C.U..A.AG.C.A....AACUCGC...G..AAG.C.CG.C..UGCAAAA.GC.UGAUAA.......................................................UUA...UGU.A.CGCGAAAAU......CCAUGG..ACA..GG.CG.U.C...GGU.AU.UG.GC...G...CUG....CG..GUCGGCGUGG..U.GC.UUGGCG.UACU....GCU
   NZ_CP038498.1     ACC..C.G..CAGCCG.C.C.U..GAGCG.AUAC.CGGU.G......A...G...C...G..CA..UC..G...C.A..U.CC.C.A....AACCAAA...G..AAG.C.GG.U..UGAAUCA.GC.GGAUGA.......................................................CUA...UGU.G.CGUCAGAAU......CCGUGG..ACG..GG.UG.U.C...GGC.AU.UG.GU...G...CCG....CA..GUCGGCGUCG..U.GC.UUGGCG.UCCU....GCU
   NZ_CP038662.1     ACC..C.G..CGCUCG.C.C.U..GAGCG.ACGC.CGGU.G......A...Ca.aG...C..UGgcUU..C...G.C..A.AA.C.C....AAACAGU...-..UCG.C.CG.-..-GC-CAG.GC.CGACGA.......................................................CUA...UGU.G.CGCGACAAC......CCGUGG..ACC..GG.CA.U.C...GGU.AU.CG.GC...G...CGG....CG..GUCGGCGUGG..U.GU.UGGGCG.UGCU....GCU
   NZ_CP040392.1     AGU..C.G..UCAUCG.C.C.U..CGGCG.AAAC.GGGC.G......A...U...A...U..UA..UC..G...C.C..A.AA.C.A....AACGCGU...G..AAG.C.CG.C..CGCCCGU.AC.UGAUGA.......................................................AUA...UGU.C.CGCGAAAAC......CCAUGG..GCC..AG.UG.U.A...GGC.AU.CG.GU...G...CCG....CU..AUUGGGGUGG..U.GU.UGGGCG.UACU....GCU
   NZ_CP040428.1     AGC..C.G..CAGCCG.C.C.U..GCAUG.AUAC.GGGC.G......A...U...G...C..CA..UC..G...C.C..C.GU.C.A....AACCCGC...G..AAG.C.GG.C..CUCCCGC.GC.CGAUAA.......................................................CUA...CGU.G.CACGAUAAC......CCCUGG..ACC..GG.CA.U.C...GGU.AU.UG.GC...G...CCG....CC..GUGGGCGUCG..U.GU.UGGGCG.UUCU....GCU
   NZ_CP041247.1     AGC..C.G..CGUCCG.U.U.U..GGGUG.AAAC.CAGC.G......A...U...G...C..CA..UC..G...U.C..C.GA.C.A....AACGCGU...G..AAA.C.CG.C..CGCCCGC.GC.CGACGA.......................................................GUA...CGU.C.CGCGAAAAU......CCGUGG..ACC..GG.UG.U.A...GGU.AU.UG.GC...G...CAG....CC..GUCGGGCUGG..U.GC.UGGGUG.UCCU....GCU
   NZ_CP041925.1     AGC..C.G..UGUGCG.U.C.U..CAGCG.ACAC.CAGC.G......A...U...G...C..CA..UC..G...U.U..A.AG.C.A....GACGCGU...G..AAA.C.CG.C..UGCUCGC.GC.CGAUGA.......................................................GUA...CGU.U.CGCGAGAAU......CCGUGG..ACC..GG.CG.U.G...GGU.AU.UG.GC...G...CAG....CU..GUCGGGCUGG..U.GG.UCGGCG.UACU....GCU
   NZ_CP043318.1     AGC..C.G..CUAUCG.U.C.U..GGGUG.AAAC.CGGU.G......A...U...G...C..GC..UG..G...C.G..A.AA.C.A....GACCCGU...G..AAG.C.GG.C..CGCGCGC.GC.GGACGA.......................................................AUA...CGU.G.CGUGAUAAU......CCAUGG..ACG..GG.UG.U.A...GGG.AU.UG.GU...G...CCG....CA..GUGGGCGUGG..U.AC.UGGGUG.UCCU....UCU
   NZ_CP043342.1     AGC..C.G..CUAUCG.C.C.U..GGGUG.AAAC.CGGU.G......A...U...G...C..GC..UG..G...C.A..A.AA.C.A....GACCCGU...G..AAG.C.CG.C..CGCGCGU.GC.AGAUGA.......................................................GUA...CGU.U.CGUGAUAAU......CCAUGG..ACG..GG.UG.U.A...GGC.AU.UG.GU...G...CCG....CA..GUGGGCGUGG..U.GC.UUGGUG.UUCU....GCU
   NZ_CP043727.1     ACU..C.G..UGAACG.U.C.U..GAGCG.AAAC.UAGC.G......A...U...A...G..AA..UC..G...C.C..G.CC.C.A....AACCA--...-..---.-.--.-..-------.--.------aagaaauugcugauaaagcugaca......acuauguccaugacaacccuugggc---...---.-.---------......------..--U..GG.CG.U.A...GGC.AU.UG.GU...G...CUG....CU..GUCGGCGUGG..U.GC.UAGGCG.UUCU....GUU
   NZ_CP044098.1     AGC..C.G..CCAUCG.U.C.U..GAGUG.AAAC.CAGC.G......A...U...G...U..AA..UC..G...C.C..A.AA.C.A....GACCCGU...G..AGG.C.CG.C..GGCUAAA.GC.CGAUAA.......................................................CUA...CGU.G.CGCGAAAAC......CCAUGG..ACA..GG.CG.U.C...GGC.AU.UG.GC...G...CUG....CA..GUCGGUGUGG..U.GC.UUGGUG.UACU....GCU
   NZ_CP044101.1     AGC..C.G..UCAUCG.U.C.U..GAGUG.AAAC.CAGC.G......A...U...G...U..GA..UU..G...C.C..A.AA.C.A....GACCCGUgaaG..CCG.C.GG.C..C---AAA.GC.CGAUAA.......................................................CUA...UGU.A.CGCGAAAAC......CCAUGG..ACU..GG.CG.U.C...GGG.AU.UG.GC...G...CUG....CA..GUCGGUGUGG..U.GC.UUGGUG.UACU....GCU
   NZ_CP044285.1     GGC..G.A..AUAAGG.C.A.G..G---A.UAAC.CGGC.G......A...-...G...C..CA..UU..G...C.C..A.GC.C.G....AAACCGU...G..AGG.C.CG.-..-GCCAGC.AC.CGGU--.......................................................GUG...CUG.G.CUGCCA---......CGGCAU..A--..GG.AG.C.G...CAC.AC.UG.GC...A...---....UU..GUCGGUAUUG..U.CA.GCUGUC.AGAG....GCC
   NZ_CP044543.1     GGA..G.A..UCAUCA.C.C.U..CGGCA.AAGC.CGAU.G......A...U...G...G..CG..UU..G...-.-..-.--.-.-....-AGCGGC...G..U--.-.--.-..-GCGGAU.CU.CGUGGC.......................................................UGA...UCC.G.CGCCAGCAU......--GUCG..G--..-C.CU.U.-...GGC.GU.UG.GC...C...GCG....CC..GUCGGCGAGG..C.GC.CGUGCG.UUCU....UCA
   NZ_CP045300.1     AGC..C.G..CCAUCG.C.C.U..CGGAG.AAAC.GAGC.G......A...U...U...U..AA..UC..G...C.C..A.AA.C.A....AACGCGC...G..AAG.C.CG.C..CGCGCGA.AC.UGAUGA.......................................................AUA...UGU.C.CGCGAAAAC......CCAUGG..GCC..AG.UG.U.A...GGC.AU.UG.GC...G...CCG....CU..AUUGGGGUAG..U.GC.UGGGCG.UGCU....GCU
   NZ_CP045771.1     AGC..C.G..CCAUCG.U.C.U..GAGCG.AAAC.CAGC.G......A...U...G...U..GA..UU..G...C.C..A.AA.C.A....GACCCGUgagG..CCG.C.GG.C..A---AAA.GC.CGAUAA.......................................................CUA...CGU.A.CGCGAAAAC......CCAUGG..ACA..GG.CG.U.C...GGC.AU.UG.GC...G...CUG....CA..GUCGGUGUGG..U.AC.UUGGUG.UACU....GCU
   NZ_CP045783.1     AGU..C.G..UGCCCG.C.C.U..GGGUG.AAAC.CAGC.G......A...U...G...C..GA..UU..U...U.G..C.GU.C.A....AACGCGC...G..AGA.C.CG.C..CGCGCGG.GC.GGAUGA.......................................................UUA...UGU.U.CGCGAAAAU......CCGUGG..ACA..GG.AG.U.C...GGG.AU.UG.GU...G...CCG....CC..GUCGGGCUGG..U.GC.UGGGUG.UCCU....GUU
   NZ_CP045845.1     AGC..C.G..CGAUCG.U.C.U..GGGUG.AAAC.CAGU.G......A...A...G...C..UC..UG..G...C.A..A.AA.C.A....AACCCGU...G..AAG.C.GG.C..GGCAAAA.GC.UGACGG.......................................................CUA...UGU.G.CGUGAAAAC......CCAUGG..ACA..GG.CG.U.C...GGU.AU.UG.GC...G...CAG....CG..GUCGGCCUGG..U.GC.UGGGCG.UUCU....GCU
   NZ_CP046904.1     GGC..G.A..UCAACG.G.C.G..AGAUG.ACGA.CGCC.G......A...C...G...C..CG..UC..G...C.G..C.AG.C.-....-------...-..---.-.--.-..-------.--.------agcgccgggaucugguagcacagcgauuugccgccgccggugggcaucagcacga---...---.-.---------......------..---..--.--.-.G...CGC.GU.CG.CC...G...CCA....UU..GGCGAC---G..U.GU.UCGACG.AUCU....GCC
   NZ_CP047495.1     ACC..C.G..CAGUCG.C.C.U..GAGCG.AUAC.UGGU.G......A...G...C...G..CA..UC..G...C.U..U.CC.C.A....AACCAAA...G..AAG.C.GG.U..UGAAUCU.GC.GGACGA.......................................................UUA...UGU.A.CGCCAGAAU......CCGUGG..ACC..GG.UG.U.C...GGC.AU.UG.GC...G...CAG....CA..GUCGGUGUCG..U.GC.UUGGCG.UCCU....GCU
   NZ_CP047698.1     CGC.uU.U..UCAUCG.A.C.A..CGGCG.AUGC.CGAU.G......G...C...G...U..CG..UC..G...C.C..C.AU.G.A....AGCGCAU...G..CGC.G.GC.-..G------.--.------cgggcgg........................................gucguuga---...---.-.--------A......GCCGCG..AUG..CA.CG.U.C...GGC.CA.CG.UC...G...CCG....AU..G-CGG-AAAG..U.GC.-GGUCGcCUAU....GCG
   NZ_CP048784.1     ACC..C.G..UGCUCG.C.C.U..GAGCG.AUGC.CGGG.G......A...Ca.aA...C..UGgcUU..C...U.C..A.AA.C.C....AAACAGA...U..CGC.C.GG.C..CAGGCG-.--.-GACGA.......................................................AUA...UGU.U.CAUGAUAAU......CCGUGG..ACU..GG.UA.U.C...GGU.AU.CG.GC...G...CCG....CU..GUCGGUGUGG..U.UC.UGGGCG.UUCU....GUU
   NZ_CP049608.1     AGC..C.G..UUACCG.U.C.U..GGGCG.AAAC.CGGC.G......A...U...G...U..GA..UU..G...C.U..G.AG.C.A....AACCCGU...G..UAG.C.GG.C..GGCCCGC.GC.CGACGA.......................................................UUA...UGU.G.CGUGAAAAU......CCAUGG..ACC..GG.CG.U.A...GGU.AU.UG.GU...G...CGG....CA..AUCGGUGUCG..U.AC.UGGGCG.UACU....ACU
   NZ_CP050150.1     AGC..C.G..UGCGCG.C.U.U..GAACG.CGGC.CGGU.G......A...G...A...A..AG..UG..G...C.U..G.CA.C.A....AACCAAA...G..AGA.U.CG.C..AGAUCGU.GC.AGAUAG.......................................................CUA...UGU.U.CAUGACAAU......CCUUGG..ACU..GG.CG.U.U...GGC.AU.CG.GC...G...CAG....CG..GUCGGUGUGG..U.GC.UAGGCG.UUCU....AUU
   NZ_CP050508.1     AGC..C.G..CGUACG.C.C.U..GGGUG.AAAC.CGGC.G......A...U...G...C..CA..UC..G...U.C..A.GG.C.A....GACCCGU...G..AAA.G.CG.C..CGCGCGC.GC.CGAUGA.......................................................GUA...CGU.U.CGCGAAAAU......CCGUGG..ACC..GG.CG.U.A...GGU.AU.UG.GC...G...CAG....CC..GUUGGGCUGG..U.GC.UGGGUG.UCCU....GCU
   NZ_CP050854.1     AAC.aC.G..CUCUCG.U.C.U..GAGUG.AGAC.CGGC.G......A...G...C...G..CA..UU..G...C.C..A.GC.C.A....UACUCGU...G..AAG.C.GG.U..GGGAUGU.GC.GGAUGA.......................................................CUA...CGU.C.CGUGAAAAU......CCGUGG..ACU..GG.CG.U.A...GGU.AU.UG.GC...G...CAG....CG..AUUGGCGUUG..U.GC.UUGGCG.UUCU....GCU
   NZ_CP051548.1     AGC..C.G..CUAUCG.U.C.U..GGGCG.AAAC.GGGG.G......A...U...G...C..CA..UU..G...C.C..C.GC.C.A....GACCCGC...G..AAG.C.CG.C..UGCAAGA.AC.UGACGA.......................................................AUA...UGU.A.CGUGAAAAC......CCAUGG..GCC..AG.CG.U.G...GGC.AU.UG.GC...G...CGG....CG..AUUGGCGUCG..U.GU.UAGGCG.UGCU....CCU
   NZ_CP051652.1     ACC..C.G..CAGUCG.C.C.U..GAGCG.AUAC.CGGU.G......A...G...C...G..CA..UC..G...C.U..U.CC.C.A....AACCAAA...G..AAG.C.GG.U..UGAAUCU.GC.GGACGA.......................................................UUA...UGU.A.CGCCAGAAC......CCGUGG..ACC..GG.UG.U.C...GGC.AU.UG.GC...G...CAG....CA..GUCGGUGUCG..U.AC.UUGGCG.UCCU....GCU
   NZ_CP051772.1     CGC..C.C..UUUUUG.U.C.U..GGCCG.CGCC.UGCC.U......A...U...G...C..CA..AU..U...C.-..-.--.-.-....GUCGCGC...G..CUG.C.GG.C..AGCGUUG.GC.CGCGGC.......................................................GCC...GGC.G.CCCAGAAACaucgugUCGCUG..GCC..AG.CA.C.Ga.aGAA.AC.UC.GC...G...CCG....AU..GGCUGCCCAU..C.GG.CCGACG.GCCU....GUG
   NZ_CP054058.1     AGC..C.G..CCACCG.U.C.U..GGGUG.AAAC.CAGC.G......A...U...G...C..CC..UU..G...C.C..A.AA.C.A....AACUCGU...G..AAG.C.CG.C..AGCACGC.GC.UGACGA.......................................................AUA...CGU.G.CGUGAUAAC......CCAUGG..ACC..GG.CG.U.G...GGU.AU.CG.GU...G...CGG....CC..GUUGGGGUGG..U.GC.UGGGUG.UGCU....GCU
   NZ_CP055055.1     AGC..C.G..UUAUCG.C.C.U..GGGUG.AAAC.CGGU.G......A...U...G...C..CA..UC..G...C.C..A.AA.C.A....AACCCGU...G..UCG.C.GG.C..GGCGCGU.GC.CGAUGA.......................................................GUA...UGU.G.CGUGAAAAU......CCAUGG..ACG..GG.CG.U.G...GGC.AU.UG.GC...G...CUG....CA..AUCGGUGUAG..U.GC.UCGGCG.UUCU....GCU
   NZ_CP055292.1     AGC..C.G..UUAUCG.C.C.U..GGGUG.AAAC.CGGU.G......A...U...G...C..CA..UC..G...C.C..A.AA.C.A....AACCCGU...G..UCG.C.GG.C..GGCGCGU.GC.UGAUGA.......................................................GUA...UGU.G.CGUGAAAAU......CCGUGG..ACC..GG.CG.U.G...GGA.AU.UG.GC...G...CUG....CA..AUCGGUGUAG..U.GC.UCGGCG.UUCU....GCU
   NZ_CP060401.1     GGC..A.C..GCGUUA.CgC.U..CAGCG.AUGC.CAGC.G......A...U...Ag.gC..UA.g-UugG...C.C..A.--.-.-....AACUAAA...G..AAA.U.UG.C..UGGCCAU.GC.UGAUAA.......................................................UUA...UGU.C.CGUGAAAAU......CCGUGG..ACA..GG.UG.U.U...GGU.AU.UG.GU...G...CGG....CA..GUUGGCAUUG..U.AU.UGGGUG.UUUU....GCU
   NZ_CP063169.1     UGC..CgG..UUAUCG.G.U.U..CGGCA.CUGC.CGCA.U......G...A...G..cG..CG..CA..G...G.A..A.CU.G.C....GAUCCGC...C..UCG.C.GC.A..GGCGCAG.AC.UGACGA.......................................................-UC...CGC.G.CGCGCCUGU......GCGCGA..GCUauGC.CG.G.C...CUC.GU.--.-C...G...CCG....UG..UGCGGCCUUG..U.GU.UCAUCG.CACU....GCU
   NZ_CP063425.1     AGC..C.G..UCACCG.U.U.U..GGGCG.AAAC.CGGC.G......A...U...G...C..GC..UC..G...C.C..C.GC.C.A....AACCCGU...G..AAG.C.GG.C..UGCGCGU.AC.CGAUGA.......................................................GUA...UGU.A.CGUGAAAAC......CCGUGG..GCC..AG.CG.U.A...GGU.AU.CG.GC...G...CCG....CC..GUCGGCGUGG..U.GC.UGGGCG.UACU....GCU
   NZ_CP063458.1     GGC..U.-..--ACCG.C.G.C..CGGUG.UAGG.AAAG.C......G...U...G...C..CG..AC..G...C.C..G.GA.G.G....-AUUCGAu.gG..UCG.C.GC.C..GUCGCCU.GC.UGCUGU.......................................................GCC...AUU.G.AUCGUGAAU......GCGCGG..UCG..GU.CG.-.U...GGC.GU.UU.GC...C...GAG....CC..---UACGUAG..C.GC.AGCGUG.G--U....GCC
   NZ_CP065044.1     ACC..C.G..CAAUCG.U.C.U..GAGCG.AUAC.CGGC.G......AgcgU...A...U..CG..CU..U...C.C.cAcAC.G.A....AA-----...G..AAG.C.AG.U..UGAAUCU.GC.GGACGA.......................................................CUA...UGU.A.CGCCAGAAC......CCGUGG..ACC..GG.UG.U.C...GGU.AU.UG.GU...G...CCG....CU..GUCGGUGUCG..U.GC.UUGGCG.UCCU....GCU
   NZ_CP065178.1     ACC..C.G..CAGUCG.C.C.U..GAGCG.AUAC.CGGU.G......A...G...C...G..CA..UC..G...C.U..U.CC.C.A....AACCAAA...G..AAG.C.GG.U..UGAAUCU.GC.GGACGA.......................................................UUA...UGU.A.CGCCAGAAU......CCGUGG..ACC..GG.UG.U.C...GGC.AU.UG.GU...G...CAG....CA..GUCGGUGUCG..U.GC.UUGGCG.UCCU....GCU
   NZ_CP065626.1     AGC..C.G..UGAGCG.C.C.U..GAGCC.AGGC.CGGC.G......A...G...A...A..CG..UC..G...C.C..A.CC.C.A....GACCCGU...G..AAA.U.GG.C..UGGGCGU.GC.CGAUGA.......................................................CUA...CGU.G.CGCGAUAAC......CCGUGG..ACC..GG.UG.U.G...GGU.AU.CG.GU...G...CCG....CC..GUGGGCGUGG..U.GC.UCGGCG.UAUU....GUU
   NZ_CP065685.1     CGU..C.G..UGAUUG.C.U.-..----G.AUGC.CGAA.G......A...A...C...U..CG..UU..G...U.C..G.AA.G.C....AUUCGAU...G..UCG.C.GC.A..UGCGCCC.GC.CGA---cgggca...........................................cguacuGCG...-GC.G.ACUUCAGAU......GCGCGG.gAUC..GA.CG.C.C...GGC.GU.CG.AGcagU...UCC....UG..UUCGGUGUAG..CgCU.CCAGCG.AACA....ACG
   NZ_CP065838.1     AGC..C.G..CGCCCG.C.C.U..GGGUG.AGAC.CAGC.G......A...A...G...C..GA..UU..U...U.G..C.GU.C.A....AACUCGU...G..AGA.C.CG.C..CGCGCGA.GC.GGAUGA.......................................................UUA...UGU.U.CGCGAAAAU......CCGUGG..ACU..GG.GG.U.C...GGG.AU.UG.GC...G...CCG....CC..GUCGGGCUGG..U.GC.UGGGUG.UCCU....GCU
   NZ_CP065856.1     ACG..A.G..--CCCG.U.C.U..GGGUG.UAGA.CGGU.G......A...U...G...U..UG..UC..G...C.-..G.GA.C.G....-ACGCCG...G..CGU.C.G-.-..-------.--.------uc...................................................cu---...---.-.---------......-CGACG..CGG..CG.GA.C.G...-GC.GU.CG.AC...G...ACG....GU..CUCGGCGAGG..C.GC.UCGGCG.GAGA....CGU
   NZ_CP070290.1     AGC..C.G..UUAUCG.U.C.U..GAGCG.AAAC.UGGC.G......A...C...G...C..CA..UU..G...C.C..A.GA.C.A....GACCCGU...G..AAG.C.GG.C..GGCGCGU.GC.CGAUGA.......................................................AUA...UGU.G.CGUGAAAAC......CCGUGG..ACG..GG.CG.U.C...GGU.AU.CG.GC...G...CUG....CC..AUCGGCGUAG..U.GC.UGGGCG.UACU....GCU
   NZ_CP071070.1     AGC..C.G..CUAUCG.U.C.U..UGGUG.AAAC.CGGU.G......A...U...G...C..UA..UC..G...C.G..A.AG.C.A....GACCCGU...G..AAG.C.CG.C..UGCCCGU.GC.AGACGA.......................................................CUA...UGU.U.CGCGAAAAU......CCAUGG..ACU..GG.CG.U.A...GGU.AU.UG.GU...G...CUG....CG..GUUGGCGUAG..U.GC.UGGGCG.UACU....GCU
   NZ_CP071320.1     --C..U.G..GGUGAA.C.A.C..CGGCG.AAUC.CUAC.U......A...U...G...C..CC..GC..G...C.C..A.AA.G.A....AGCGGUG...-..---.-.--.C..ACCGCAC.--.CGACGA.......................................................CUA...UGU.G.CGGGAUAAA......CCCUGG..CAC..AG.CG.U.G...GGC.AU.CG.GC...G...CCA....CC..GUCGGGCUGG..U.GC.UGGGGC.UGCU....GCU
   NZ_CP071383.1     AGC..C.G..UUAUCG.C.C.U..GGGUG.AGAC.AGGU.G......A...C...G...C..GC..UG..G...C.C..A.AA.C.A....GACCCGU...G..AAG.C.AG.C..CGCUCGC.GC.GGAUGA.......................................................AUA...UGU.A.CGUGACAAC......CCGUGG..ACC..GG.AG.U.G...GGC.AU.UG.GC...G...CCG....CU..AUCGGUGUCG..U.UC.UGGGUG.UCCU....GCU
   NZ_CP071454.1     GGU..G.A..UCGUCG.U.C.U..GCUGG.AAGG.CGGU.G......U...A...G...C..CC..UU..G...C.C..G.--.A.U....CACCGUC...-..---.-.--.-..-------.--.------cagagcaggacaaagagga.................agaugaggccgaaggcgau---...---.-.---------......------..GGC..GG.CG.A.U...GCC.AU.AG.GC...-...CUG....GA..ACCGGCG--C..U.CG.GCGGCG.UAGC....GCC
   NZ_CP071462.1     ---..C.G..GCGUCGaA.C.U..GGCCG.CCGG.CGUC.G......C...C...G...G..CU..U-..-...-.-..-.--.C.G....AUCUCGU...C..GCG.C.GG.C..GGCUCGG.UCcCGAUCA.......................................................GAU...CGA.A.CGCGUCGAU......CAGGGC.gUCG..AG.CA.C.G...-AG.AU.UG.CC...G...UUG....UU..GACGUCGUCG..C.GG.UCGACG.ACU-....---
   NZ_CP071802.1     ACC..C.G..UGAGCG.C.U.U..GAGCG.AAAC.CGGU.GacaaaaU...U...G...C..CG..CU..CagaC.U..A.AA.G.A....AAUCGCU...G..GUA.A.AG.C..AG-----.--.--A---uaa................................................cuau---...-GU.A.CAUGACAAU......CCUUGG..ACC..GG.UG.U.U...GGG.AU.CG.GC...G...CUG....CG..GUUGGCGUGG..U.GU.UAGGCG.UUCU....GUU
   NZ_CP072652.1     ACC..C.G..CGCGCG.C.C.U..GAGUG.AUGC.AGGG.G......A...C...A...A..AA..UC..G...C.U..U.GU.C.A....AACCAGG...C..AAA.U.UG.C..UGAGCAG.GC.AGAUGA.......................................................UUA...UGU.G.CGUGAAAAC......CCCUGG..UCU..GG.UG.U.U...GGC.AU.CG.GU...G...CUG....CG..GUGGGCGUAG..U.GC.UGGGCG.UUUU....GCU
   NZ_CP073236.1     AGC..C.G..CGUUCG.C.C.U..GGGUG.AAAC.CAGC.G......A...C...G...C..CA..UU..G...U.G..A.AG.C.A....AACGCGC...G..AAA.C.CG.C..UGCGCGU.GC.GGAUGA.......................................................AUA...UGU.C.CGUGAAAAC......CCGUGG..ACC..GG.CG.U.A...GGG.AU.UG.GU...G...CUG....CC..GUCGGGCUGG..U.AC.UGGGUG.UCCU....GCU
   NZ_CP073366.1     GG-..-.-..--CCUU.C.G.G..CGGCG.AAAU.CGUC.G......A...U...A...C..CA..UC..G...C.C..A.AG.G.A...cUACUCG-...-..---.-.--.-..-------.--.------cggacccgcgccc.............................ggauucucgucaa---...---.-.---------......------..-CG..AG.GUcU.C...GGC.GC.UG.GC...G...AUG....CG..GUCGAUCAUG..C.AC.UUCGGG.UUCU....-CC
   NZ_CP074352.1     AGC..C.G..CUACCG.U.C.U..GACUG.AAAC.CGGC.G......A...C...G...U..UA..UC..G...C.G..C.GU.C.A....GACUCGC...G..AAG.C.GG.C..AAGCCGC.GC.GGAUGA.......................................................GUA...CGU.G.AAAGAAAAU......CCGUGG..ACC..GG.CG.U.A...GGU.AU.UG.GU...G...CGG....CA..GUGGGUGUCG..U.GC.UGGGCG.UUCU....GCU
   NZ_CP077097.1     UCG..C.U..UGUAGG.A.G.-..CGGCC.--UU.GCGU.-......-...C...G...C..GA..UG..G...G.C..-.--.U.G....CGCAGCA...G..CCC.U.GG.C..A-AAUGU.G-.------.......................................................-CA...UAU.U.CGCUGAAAU......CCGGGGgcUGC..UG.CG.C.A...GCC.CA.UC.GC...G...---....--..ACGCAA----..G.GC.CGCUCC.UACA....CGG
   NZ_CP077262.1     AGC..C.G..CCAUCG.U.C.U..GAGCG.AGAC.CAGC.G......A...U...G...U..GA..UU..G...C.U..A.AG.C.A....AACCCGU...G..AAG.C.GG.C..CGCCAAA.GC.CGAUAA.......................................................CUA...UGU.G.CGCGAAAAC......CCAUGG..ACA..GG.CG.U.U...GGU.AU.UG.GC...G...CUG....CG..GUCGGUGUGG..U.GC.UUGGUG.UACU....GCU
   NZ_CP077392.1     AGC..C.G..UUACCG.U.C.U..GGGUG.AAAC.CGGU.G......A...U...G...C..AC..UG..G...C.G..A.AA.C.A....GACCCGC...G..AAG.C.GG.C..UGCGCGC.GC.AGACGA.......................................................AUA...UGU.A.CGUGACAAU......CCAUGG..ACA..GG.CG.U.U...GGU.AU.UG.GU...G...CCG....CA..GUGGGUGUGG..U.GC.UGGGUG.UCCU....GCU
   NZ_CP080293.1     UAC..U.G..GCCGCC.G.G.U..CGGCC.GUGC.CGAC.A......A...C...G...U..CU..AC..G...G.C..G.AU.C.G....CAACCUG...U..UCU.G.CU.C..-GUGCGU.GC.CGAUGA.......................................................GCG...CGU.A.CGAGGAGUA......AGCAGG..CAG..UC.CG.C.G...GGCaGU.CG.GC...A...C-A....UA..GUCGGCGG-G..C.AC.UGCGGG.C---....---
   NZ_CP081000.1     GGC..C.G..UAUCCG.C.A.UcaAGCCG.UAGG.GAGU.U......C...C...G...C..CG..GU..U...U.C..-.--.U.G....CCCCCGG...GcuGCU.G.CG.C..C------.--.------......................................................a---...---.-.--CGAAAAU......CGCAGC..CCG..GG.UG.C.A...GAA.AU.CG.GC...G...CUG....CG..GC-----UAG..C.GG.U-UGCG.--CA....GCU
   NZ_CP082141.1     ACC..C.G..CGCCCG.C.C.U..GGGUG.AUUC.CGGU.G......A...U...C...G..CA..UU..G...C.G..C.AG.A.C....CACCCGC...G..AAG.C.CG.C..AGAGCGU.AC.CGAUGU.......................................................UUA...UGU.G.CGUGAUAAC......CCGUGG..ACC..AG.CG.U.A...GGU.AU.UG.GC...G...CCG....CA..GUUGGCGUUG..U.AC.UGGGCG.UGCU....GCU
   NZ_CP082833.1     AGC..C.G..CUACCG.U.C.U..GGGUG.AAAC.CGGC.G......A...U...G...C..CA..UU..G...C.C..C.GU.C.A....GACCCGU...G..AAG.C.GG.C..CUCGCGA.GC.GGAUGA.......................................................UUA...UGU.G.CGCGAGAAU......CCGUGG..GCG..GG.CG.U.A...GGU.AU.CG.GC...G...CCG....CG..GUUGGCGUAG..U.GC.UGGGCA.UGCU....GCU
   NZ_CP083638.1     AGC..C.G..UUAUCG.C.C.U..GGGCG.AAAC.UGGC.G......A...U...G...C..CA..UU..G...C.U..A.AA.C.A....GACCCGG...G..AAG.C.GG.C..AGCGCGA.GC.GGACGA.......................................................AUA...UGU.C.CGUGAAAAU......CCAUGG..ACU..GG.CG.U.A...GGU.AU.UG.GC...G...CGG....CC..GUAGGCCUUG..U.GC.UGGGCG.UUCU....ACU
   NZ_CP083737.1     AGC..C.G..CGCUCG.C.U.U..GAAUG.CGGC.AGGU.G......A...G...A...A..AG..UU..G...C.U..G.CA.C.A....AACCAAA...G..AAA.U.CG.C..AGAUCGU.GC.AGAUAG.......................................................CUA...UGU.U.CAUGAUAAU......CCUUGG..ACU..GG.UG.U.U...GGC.AU.CG.GC...G...CUG....CC..GUUGGUGUGG..U.GU.UAGGCG.UUUU....AUU
   NZ_CP084032.1     ACC..C.G..UAAUCG.C.C.U..GAGCG.AUAC.CGGU.G......AgcgA...A...U..CG..CU..U...C.C..-.--.C.A....CACCAAA...G..AAG.C.GG.U..UGAAUCU.GC.AGACGA.......................................................CUA...UGU.A.CGUCAGAAC......CCGUGG..ACC..GG.UG.U.U...GGU.AU.UG.GU...G...CUG....CU..GUCGGCGUCG..U.GC.UUGGCG.UCCU....GCU
   NZ_CP084521.1     AGC..C.G..UGAGCG.U.C.U..AAGCC.AGGC.CGGC.G......A...A...A...G..CG..UG..G...C.G..A.CA.C.A....GACCCGA...G..AAA.U.GG.C..CGGACGA.GC.CGAUGA.......................................................CUA...UGU.C.CGGGAUAAU......CCCUGG..ACC..GG.CG.U.U...GGU.AU.CG.GU...G...CCG....CU..GUCGGCAUAG..U.GC.UUGGCG.UGCU....GCU
   NZ_CP084874.1     AGU..C.G..CGCCCG.C.C.U..GGGGG.AAAC.CAGC.G......A...G...G...C..GA..UU..C...U.G..C.GU.C.A....AACGCGU...G..AAA.C.CG.C..CGCCCGG.GC.GGAUGA.......................................................UUA...UGU.U.CGCGAAAAU......CCGUGG..ACU..GG.AG.U.C...GGG.AU.UG.GU...G...CCG....CC..GUCGGGCUGG..U.GC.UGGGUG.UCCU....GCU
   NZ_CP085627.1     ACC..C.G..CGCGCG.C.C.U..GGGUG.ACUC.CGGU.G......A...C...C...G..CA..UU..G...C.C..C.AG.A.C....CACCCGU...G..AAG.C.GG.C..CGAUCGU.GC.CGACGU.......................................................CUA...UGU.A.CGCGACAAU......CCGUGG..ACC..AG.CG.U.C...GGU.AU.UG.GC...G...CCG....CC..GUUGGCGUGG..U.AC.UGGGCG.UUCU....GCU
   NZ_CP086253.1     ACC..C.G..CAGUCG.C.C.U..GAGCG.AUAC.GGGC.G......A...G...C...G..CA..UC..G...C.G..U.CC.C.A....AACCAAA...G..AAG.C.AG.U..UGAAUCG.GC.GGACGA.......................................................UUA...UGU.A.CGUCAGAAC......CCGUGG..ACC..GG.UG.U.C...GGC.AU.UG.GU...G...CAG....CA..GUCGGCGUCG..U.GC.UUGGCG.UCCU....GCU
   NZ_CP087392.1     ACC..C.G..UAGCCG.C.C.U..GAGCG.AUAC.CGGU.G......A...G...C...G..CA..UU..G...C.C..U.CC.C.A....AACCAAA...G..AAG.C.GG.U..UGAAUCG.GC.GGACGA.......................................................CUA...UGU.A.CGUCAGAAC......CCGUGG..ACU..GG.UG.U.C...GGU.AU.UG.GU...G...CUG....CU..GUGGGCGUCG..U.GC.UUGGCG.UCCU....UCU
   NZ_CP087880.1     AGC..C.G..CCAUCG.U.C.U..GGGCG.AAAC.CAGC.G......A...U...G...C..GC..UG..G...C.G..A.AA.C.A....GACUCGC...G..AAG.C.CG.C..GGCGCGU.GC.UGACGG.......................................................UUA...UGU.A.CGCGAAAAC......CCAUGG..ACC..GG.CG.U.G...GGU.AU.CG.GG...G...CGG....CA..GUCGGUCUGG..U.AC.UGGGCG.UGCU....GCU
   NZ_CP089919.1     ACC..C.G..CGAACG.U.C.U..GAGCG.AUAC.AGGU.G......A...U...A...A..AA..UU..G...C.C..U.AU.C.A....GACC---...-..---.-.--.-..-------.--.------aaagaaauugccggcaaagcugacg....auuacgugcaugaaaaacccuggacg---...---.-.---------......------..---..GG.CG.U.C...GGU.AU.UG.GU...G...CCG....CG..GUCGGUGUUG..U.GA.UUGGCG.UUCU....GUU
   NZ_CP090968.1     AGC..C.G..UGAACG.C.C.U..GAGCC.AGGC.CGGU.G......A...A...A...A..CG..UG..G...C.G..A.CC.C.A....GACCCGG...G..AAA.U.GG.C..CGGGCGA.GC.CGAUGA.......................................................CUA...UGU.C.CGGGAUAAU......CCCUGG..ACC..GG.CG.U.U...GGC.AU.CG.GC...G...CCG....CC..GUCGGCGUCG..U.GC.UUGGCG.UGCU....GCU
   NZ_CP091779.1     AGC..C.G..UUAUCG.C.C.U..CGGUG.AGAC.CGGC.G......A...U...G...C..GU..UA..G...C.U..A.AA.C.A....GACCCGU...G..AAG.C.CG.C..CGCGCGC.GC.UGACGA.......................................................AUA...UGU.U.CGCGACAAU......CCGUGG..ACG..GG.UG.U.G...GGU.AU.UG.GC...G...CUG....CC..GUUGGUGUAG..U.GC.UGGGUG.UCCU....GCU
   NZ_CP093328.1     ACC..C.G..CGAGCG.U.C.U..GAGUG.AUAC.AGGU.G......A...C...A...A..GA..UU..G...C.C..U.AU.C.A....GACC---...-..---.-.--.-..-------.--.------aaagaaaucgccgguaaagcugacg....auuacgugcaugaaaaacccuggacg---...---.-.---------......------..---..GG.CG.U.C...GGU.AU.UG.GU...G...CCG....CG..GUCGGUGUUG..U.GA.UUGGCG.UUCU....GUU
   NZ_CP093332.1     AGC..C.G..UGUCCG.U.C.U..GGGUG.AUAC.CGGC.G......A...C...G...U..GA..UU..G...C.C..A.AA.C.A....AACGCGA...G..AAG.C.GG.C..GGCAAAA.GC.UGACGA.......................................................UUA...UGU.U.CGUGAAAAU......CCAUGG..ACC..GG.CG.U.G...GGU.AU.UG.GG...G...CGG....CG..AUUGGCGUCG..U.GC.UCGGUG.UCCU....GCU
   NZ_CP093334.1     AGC..C.G..CGUCCG.G.C.U..GGGUG.AAAC.CAGC.G......A...U...G...C..CA..UC..G...U.C..A.GA.C.A....AACGCGU...G..AAA.C.UG.C..CGCCCGC.GC.CGACGA.......................................................GUA...CGU.C.CGCGAAAAU......CCGUGG..ACC..GG.UG.U.A...GGU.AU.UG.GC...G...CAG....CC..GUCGGGCUGG..U.GC.UGGGUG.UCCU....GCU
   NZ_CP093378.1     CGC..C.G..UGAACG.G.C.U..CGGUG.AAGU.CGAG.G......U...A...G...C..CG..AG..G...U.C..G.AA.CaG....GACCU--...-..---.-.--.-..-------.--.------ucgucacgaag................................cgugcguacagc---...---.-.---------......------..--A..GG.UG.CaG...GAU.CG.CGuGC...U...CGA....UG..C-CGCCGAUG..U.AC.UGGUCG.ACCG....GCG
   NZ_CP096201.1     AGC..C.G..UGACCG.C.C.U..GGGCG.AAGC.AGGC.G......A...A...G...U..CU..UA..U...C.U..A.AG.C.A....GACACGU...G..AAG.C.GG.C..GGCCAAA.GC.CGAUG-.......................................................GCU...ACGuG.CGUGAAAAC......CCAUGG..ACC..GG.CG.U.C...GGU.AU.UG.GU...G...CAG....CC..GUCGGGCUGG..U.AC.UGGGCG.UUCU....GCU
   NZ_CP097108.1     GGC..C.G..GUGGCG.C.G.C..GGGAGgUGUG.CAAC.C......U...G...G...A..CU..UC..G...C.C..G.AG.G.G....CA-----...-..AUC.U.GG.C..GGUGGGC.CG.CGAAAA.......................................................CGG...CCU.G.CUC---AAC......CCCGAU..-UU..GC.CG.C.C...GAU.GG.AA.UU...C...GUG....CA..GUCGGAUUAC..U.UC.CCGGCG.AUCC....GCC
   NZ_CP100494.1     AGC..C.G..UACUCG.C.C.U..GGGCG.AAAC.CGGC.G......A...A...G...U..CC..UC..G...C.A..G.AA.C.A....GACCCGC...G..UAG.C.GG.C..GGCACGU.GC.CGACGA.......................................................UUA...CGU.U.CGUGAAAAC......CCAUGG..ACU..GG.CG.U.A...GGU.AU.CG.GU...G...CGG....CA..GUCGGUGUCG..U.AC.UGGGCG.UACU....UCU
   NZ_CP104006.1     ACC..C.G..CGAGCG.U.C.U..GAGUG.AAAC.UAGC.G......A...UagaA...U..CG..CU..G...C.C..-.--.C.A....AACCA--...-..---.-.--.-..-------.--.------aagaaauugcugauaaggccgaca......cuuauguccaugacaacccguggca---...---.-.---------......------..--U..GG.UG.U.G...GGU.AU.CG.GU...G...CCG....CA..GUUGGCGUGG..U.GC.UAGGCG.UUCU....GUU
   NZ_CP107077.1     AGC..C.G..CGACCG.C.C.U..GGGCG.AUAC.CGGC.G......A...U...G...U..UA..UU..G...C.U..C.GU.C.A....GACCCGC...G..AAG.C.CG.C..UGCCCGU.AC.CGAUGA.......................................................GUA...CGU.G.CGUGACAAU......CCGUGG..GCC..AG.CG.U.U...GGC.AU.CG.GC...G...CCG....CA..AUCGGCGUGG..U.GU.UAGGCG.UUCU....GAU
   NZ_CP109947.1     ---..C.G..UAGCCG.C.C.U..UAGUG.AAGC.GGGU.G......A...G...C...G..UA..UC..G...C.U..U.CU.C.A....CACCAAA...G..ACG.C.GG.U..UGAAUCC.GC.CGACGA.......................................................UUA...UGU.U.CGUGAUAAC......CCAUGG..ACA..GG.CG.U.U...GGU.AU.UG.GU...G...CCG....CU..AUCGGCGUCG..U.GC.UUGGCG.UUCU....GCU
   NZ_LR134201.1     AGC..C.G..UGACCG.C.C.U..CGGUG.AUGC.CAGC.G......A...C...G...C..GA..UC..G...C.C..A.GG.C.A....AACGCGU...G..AGG.C.GG.CcuCGAAAGC.G-.-GAUGA.......................................................UUA...CGU.U.CGCGAGAAU......CCGUGG..ACC..GG.CG.U.G...GGG.AU.UG.GU...G...CGG....CG..GUAGGCGUCG..U.GC.UGGGCG.UGCU....GCU
   NZ_LR134326.1     CAG..C.G..GCAGGU.G.C.A..CGGUC.UCGG.CGAC.G......A...C...G...U..CG..AC..G...C.C..A.CA.G.A....UAUCCAG...G..CCU.A.UC.A..UGCGCGC.GG.CCGUGA.......................................................CGG...CGC.G.CGCGGCGAG......UUCGGG..AUG..GA.CU.U.C...GUC.GG.UG.AC...G...UC-....-G..GUGGCCGCGC..C.GC.CGGUAC.UGAG....AUU
   NZ_LR134485.1     AGC..C.G..CCAUCG.U.C.U..GAGCG.AGAC.CAGC.G......A...U...G...U..GA..UU..G...C.U..A.AG.C.A....AACCCGU...G..AAG.C.GG.C..CGCUAAA.GC.CGACAA.......................................................CUA...UGU.G.CGCGAAAAC......CCAUGG..ACA..GG.CG.U.C...GGC.AU.UG.GC...G...CUG....CG..GUCGGUGUGG..U.GC.UUGGUG.UACU....GCU
   NZ_LR134494.1     ACC..C.G..UGCUCG.C.C.U..GAGCG.AUGC.CGGG.G......A...C...A...A..GA..UU..G...C.C..U.CC.C.A....GACCAAA...C..AAA.U.CG.C..CGGCCAG.GC.GGACGA.......................................................GUA...UGU.U.CGUGAUAAU......CCGUGG..ACC..GG.UA.U.C...GGU.AU.CG.GC...G...CUG....CG..GUCGGCGUAG..U.GC.UGGGCG.UUCU....GUU
   NZ_LR990739.1     --C..A.U..CGCGCG.G.C.A..GGCGC.AGGU.CGGC.G......A...U...G...A..CA..UC..G...C.C..C.AU.C.A....CUUCUUC...G..GCG.C.G-.-..-------.--.------gc...................................................cg---...---.-.---------......-CGUGC..GUA..GA.CC.U.C...GGC.GU.UG.UC...G...AAG....AA..AUUGAUGCCG..U.UG.UCC-CA.GGCG....GCG
   NZ_LS483470.1     GGC.aC.G..CGCUCG.C.C.U..GAGCG.AAAC.CGGC.G......G...U...A...A..AA..UC..G...U.C..G.AU.C.A....GACAAAA...G..AAG.U.GG.C..GGACAAA.GC.GGACAG.......................................................CUA...UGU.U.CAUGAAAAA......CCUUGG..GCC..AG.CG.U.C...GGU.AU.UG.GC...G...CUG....CC..GUAGGUUUGG..U.GC.UCGGCG.UACU....GCU
   NZ_LT906479.1     ---..-.-..------.-.C.U..GAGCG.ACGC.CGGG.G......A...Ca.aG...C..UG..GC..U...U.C..G.CA.G.A....--CCAGGcagA..UCG.CcGG.C..CAGGCG-.--.-GAUGA.......................................................UUA...CGU.G.CGUGAUAAU......CCGUGG..ACC..GG.CA.U.C...GGC.AU.CG.GC...G...CUG....CG..GUGGGCGUAG..U.GC.UGGGCG.UUCU....GCU


   Structure         (((...........((.(.(....(((((...((.((((............(...(...(..((...(..(...(.(.......(.(......(((((......(((.(.((.....((((((.((..............................................................)))...))).).)..............))))))..)))..))....).)...))).)..)).))...)..............))))))......).)).)))))).........)))


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yqjC-yqjD-yqjE-yqjK



Position: 571-680, Conformation: #0







97% 90% 75% 50% Nucleotide present N N N Nucleotide identify E < 0.1 Base-pair covariation E < 0.05 Helix-level covariation 97% 90% 75%

Y Y R Y C G Y Y R R Y R R Y Y R R Y R R Y R Y G Y Y R R Y Y Y R R Y R Y G R Y R Y Y G G Y G Y G Y R Y Y G G Y Y G Y R Y Y R R Y G Y R Y Y 5'