tig



Position: 1133-1278, Conformation: #1







DMS reactivity > 1.0 0.0 0.4 0.7 G/U/No data
Position: 0 (position.label in template: 0.5')5' Position: 1 (position.label in template: 1.C) Reactivity: nanC Position: 2 (position.label in template: 2.G) Reactivity: nanG Position: 3 (position.label in template: 3.A) Reactivity: nanA Position: 4 (position.label in template: 4.A) Reactivity: nanA Position: 5 (position.label in template: 5.A) Reactivity: nanA Position: 6 (position.label in template: 6.A) Reactivity: nanA Position: 7 (position.label in template: 7.A) Reactivity: nanA Position: 8 (position.label in template: 8.C) Reactivity: nanC Position: 9 (position.label in template: 9.A) Reactivity: nanA Position: 10 (position.label in template: 10.A) Reactivity: nanA Position: 11 (position.label in template: 11.G) Reactivity: nanG Position: 12 (position.label in template: 12.C) Reactivity: nanC Position: 13 (position.label in template: 13.U) Reactivity: nanU Position: 14 (position.label in template: 14.C) Reactivity: nanC Position: 15 (position.label in template: 15.U) Reactivity: nanU Position: 16 (position.label in template: 16.G) Reactivity: nanG Position: 17 (position.label in template: 17.G) Reactivity: nanG Position: 18 (position.label in template: 18.A) Reactivity: nanA Position: 19 (position.label in template: 19.A) Reactivity: nanA Position: 20 (position.label in template: 20.C) Reactivity: nanC Position: 21 (position.label in template: 21.U) Reactivity: nanU Position: 22 (position.label in template: 22.G) Reactivity: nanG Position: 23 (position.label in template: 23.C) Reactivity: nanC Position: 24 (position.label in template: 24.C) Reactivity: nanC Position: 25 (position.label in template: 25.G) Reactivity: nanG Position: 26 (position.label in template: 26.C) Reactivity: nanC Position: 27 (position.label in template: 27.G) Reactivity: nanG Position: 28 (position.label in template: 28.C) Reactivity: nanC Position: 29 (position.label in template: 29.G) Reactivity: nanG Position: 30 (position.label in template: 30.A) Reactivity: nanA Position: 31 (position.label in template: 31.A) Reactivity: nanA Position: 32 (position.label in template: 32.C) Reactivity: nanC Position: 33 (position.label in template: 33.U) Reactivity: nanU Position: 34 (position.label in template: 34.G) Reactivity: nanG Position: 35 (position.label in template: 35.U) Reactivity: nanU Position: 36 (position.label in template: 36.U) Reactivity: nanU Position: 37 (position.label in template: 37.C) Reactivity: 0C Position: 38 (position.label in template: 38.G) Reactivity: nanG Position: 39 (position.label in template: 39.A) Reactivity: 1A Position: 40 (position.label in template: 40.A) Reactivity: 1A Position: 41 (position.label in template: 41.G) Reactivity: nanG Position: 42 (position.label in template: 42.A) Reactivity: 0.5A Position: 43 (position.label in template: 43.A) Reactivity: 0.5A Position: 44 (position.label in template: 44.C) Reactivity: 0C Position: 45 (position.label in template: 45.A) Reactivity: 0A Position: 46 (position.label in template: 46.G) Reactivity: nanG Position: 47 (position.label in template: 47.G) Reactivity: nanG Position: 48 (position.label in template: 48.C) Reactivity: 1C Position: 49 (position.label in template: 49.U) Reactivity: nanU Position: 50 (position.label in template: 50.A) Reactivity: 0A Position: 51 (position.label in template: 51.A) Reactivity: 0A Position: 52 (position.label in template: 52.A) Reactivity: 1A Position: 53 (position.label in template: 53.C) Reactivity: 1C Position: 54 (position.label in template: 54.G) Reactivity: nanG Position: 55 (position.label in template: 55.C) Reactivity: 0C Position: 56 (position.label in template: 56.C) Reactivity: 0C Position: 57 (position.label in template: 57.G) Reactivity: nanG Position: 58 (position.label in template: 58.C) Reactivity: 1C Position: 59 (position.label in template: 59.G) Reactivity: nanG Position: 60 (position.label in template: 60.U) Reactivity: nanU Position: 61 (position.label in template: 61.A) Reactivity: 0A Position: 62 (position.label in template: 62.G) Reactivity: nanG Position: 63 (position.label in template: 63.U) Reactivity: nanU Position: 64 (position.label in template: 64.U) Reactivity: nanU Position: 65 (position.label in template: 65.G) Reactivity: nanG Position: 66 (position.label in template: 66.U) Reactivity: nanU Position: 67 (position.label in template: 67.U) Reactivity: nanU Position: 68 (position.label in template: 68.G) Reactivity: nanG Position: 69 (position.label in template: 69.G) Reactivity: nanG Position: 70 (position.label in template: 70.C) Reactivity: 0.5C Position: 71 (position.label in template: 71.C) Reactivity: 0C Position: 72 (position.label in template: 72.U) Reactivity: nanU Position: 73 (position.label in template: 73.G) Reactivity: nanG Position: 74 (position.label in template: 74.C) Reactivity: 0.5C Position: 75 (position.label in template: 75.U) Reactivity: nanU Position: 76 (position.label in template: 76.G) Reactivity: nanG Position: 77 (position.label in template: 77.C) Reactivity: 0.5C Position: 78 (position.label in template: 78.U) Reactivity: nanU Position: 79 (position.label in template: 79.G) Reactivity: nanG Position: 80 (position.label in template: 80.G) Reactivity: nanG Position: 81 (position.label in template: 81.G) Reactivity: nanG Position: 82 (position.label in template: 82.C) Reactivity: 0C Position: 83 (position.label in template: 83.G) Reactivity: nanG Position: 84 (position.label in template: 84.A) Reactivity: 1A Position: 85 (position.label in template: 85.A) Reactivity: 0.5A Position: 86 (position.label in template: 86.G) Reactivity: nanG Position: 87 (position.label in template: 87.U) Reactivity: nanU Position: 88 (position.label in template: 88.U) Reactivity: nanU Position: 89 (position.label in template: 89.A) Reactivity: 0.5A Position: 90 (position.label in template: 90.U) Reactivity: nanU Position: 91 (position.label in template: 91.C) Reactivity: 0.5C Position: 92 (position.label in template: 92.C) Reactivity: 0C Position: 93 (position.label in template: 93.G) Reactivity: nanG Position: 94 (position.label in template: 94.C) Reactivity: 0C Position: 95 (position.label in template: 95.A) Reactivity: 0A Position: 96 (position.label in template: 96.C) Reactivity: 0C Position: 97 (position.label in template: 97.C) Reactivity: 0C Position: 98 (position.label in template: 98.A) Reactivity: 0A Position: 99 (position.label in template: 99.A) Reactivity: 0A Position: 100 (position.label in template: 100.C) Reactivity: 0C Position: 101 (position.label in template: 101.G) Reactivity: nanG Position: 102 (position.label in template: 102.A) Reactivity: 0.5A Position: 103 (position.label in template: 103.G) Reactivity: nanG Position: 104 (position.label in template: 104.C) Reactivity: 0C Position: 105 (position.label in template: 105.U) Reactivity: nanU Position: 106 (position.label in template: 106.G) Reactivity: nanG Position: 107 (position.label in template: 107.A) Reactivity: 0.5A Position: 108 (position.label in template: 108.A) Reactivity: 0.5A Position: 109 (position.label in template: 109.A) Reactivity: 0.5A Position: 110 (position.label in template: 110.G) Reactivity: nanG Position: 111 (position.label in template: 111.C) Reactivity: 0C Position: 112 (position.label in template: 112.U) Reactivity: nanU Position: 113 (position.label in template: 113.G) Reactivity: nanG Position: 114 (position.label in template: 114.A) Reactivity: 0A Position: 115 (position.label in template: 115.C) Reactivity: 0.5C Position: 116 (position.label in template: 116.G) Reactivity: nanG Position: 117 (position.label in template: 117.A) Reactivity: 1A Position: 118 (position.label in template: 118.A) Reactivity: 0A Position: 119 (position.label in template: 119.G) Reactivity: nanG Position: 120 (position.label in template: 120.A) Reactivity: 1A Position: 121 (position.label in template: 121.G) Reactivity: nanG Position: 122 (position.label in template: 122.C) Reactivity: 0C Position: 123 (position.label in template: 123.G) Reactivity: nanG Position: 124 (position.label in template: 124.C) Reactivity: 1C Position: 125 (position.label in template: 125.G) Reactivity: nanG Position: 126 (position.label in template: 126.U) Reactivity: nanU Position: 127 (position.label in template: 127.G) Reactivity: nanG Position: 128 (position.label in template: 128.A) Reactivity: 1A Position: 129 (position.label in template: 129.A) Reactivity: 1A Position: 130 (position.label in template: 130.A) Reactivity: 0.5A Position: 131 (position.label in template: 131.G) Reactivity: nanG Position: 132 (position.label in template: 132.G) Reactivity: nanG Position: 133 (position.label in template: 133.C) Reactivity: 0.5C Position: 134 (position.label in template: 134.C) Reactivity: 0C Position: 135 (position.label in template: 135.U) Reactivity: nanU Position: 136 (position.label in template: 136.G) Reactivity: nanG Position: 137 (position.label in template: 137.A) Reactivity: 1A Position: 138 (position.label in template: 138.U) Reactivity: nanU Position: 139 (position.label in template: 139.C) Reactivity: 0C Position: 140 (position.label in template: 140.G) Reactivity: nanG Position: 141 (position.label in template: 141.A) Reactivity: 1A Position: 142 (position.label in template: 142.A) Reactivity: 1A Position: 143 (position.label in template: 143.G) Reactivity: nanG Position: 144 (position.label in template: 144.A) Reactivity: 0.5A Position: 145 (position.label in template: 145.G) Reactivity: nanG Position: 146 (position.label in template: 146.A) Reactivity: 1A Position: 147 (position.label in template: 147.U) Reactivity: nanU Position: 148 (position.label in template: 148.G) Reactivity: nanG Position: 149 (position.label in template: 149.G) Reactivity: nanG Position: 150 (position.label in template: 150.C) Reactivity: 0C Position: 151 (position.label in template: 151.U) Reactivity: nanU Position: 152 (position.label in template: 152.U) Reactivity: nanU Position: 153 (position.label in template: 153.C) Reactivity: nanC Position: 154 (position.label in template: 154.U) Reactivity: nanU Position: 155 (position.label in template: 155.G) Reactivity: nanG Position: 156 (position.label in template: 156.C) Reactivity: nanC Position: 157 (position.label in template: 157.G) Reactivity: nanG Position: 158 (position.label in template: 158.U) Reactivity: nanU Position: 159 (position.label in template: 159.A) Reactivity: nanA Position: 160 (position.label in template: 160.C) Reactivity: nanC Position: 161 (position.label in template: 161.G) Reactivity: nanG Position: 162 (position.label in template: 162.A) Reactivity: nanA Position: 163 (position.label in template: 163.A) Reactivity: nanA Position: 164 (position.label in template: 164.G) Reactivity: nanG Position: 165 (position.label in template: 165.A) Reactivity: nanA Position: 166 (position.label in template: 166.U) Reactivity: nanU Position: 167 (position.label in template: 167.C) Reactivity: nanC Position: 168 (position.label in template: 168.C) Reactivity: nanC Position: 169 (position.label in template: 169.G) Reactivity: nanG Position: 170 (position.label in template: 170.A) Reactivity: nanA Position: 171 (position.label in template: 171.A) Reactivity: nanA Position: 172 (position.label in template: 172.A) Reactivity: nanA Position: 173 (position.label in template: 173.G) Reactivity: nanG Position: 174 (position.label in template: 174.A) Reactivity: nanA Position: 175 (position.label in template: 175.A) Reactivity: nanA Position: 176 (position.label in template: 176.G) Reactivity: nanG Position: 177 (position.label in template: 177.U) Reactivity: nanU Position: 178 (position.label in template: 178.U) Reactivity: nanU Position: 179 (position.label in template: 179.A) Reactivity: nanA Position: 180 (position.label in template: 180.U) Reactivity: nanU Position: 181 (position.label in template: 181.C) Reactivity: nanC Position: 182 (position.label in template: 182.G) Reactivity: nanG Position: 183 (position.label in template: 183.A) Reactivity: nanA Position: 184 (position.label in template: 184.G) Reactivity: nanG Position: 185 (position.label in template: 185.U) Reactivity: nanU Position: 186 (position.label in template: 186.U) Reactivity: nanU Position: 187 (position.label in template: 187.3')3' 10 20 30 50 100 150


tig



Position: 1133-1278, Conformation: #1







Retained alignments:


   NC_003910.7       UA--C..C..AC......A...A..uUA...C...C.UGC...U...-.G......A...AAUGUUU.AC.A..............GA.GCA.AGC...A..GAAC..GUCGUGUUAAAAU...............................................CGGUU.......U....G.C...UU..UUAG..GUG.AA..GUAAU..U.............................................AA.A.GU.AA..A...UG..AA.C..UUAAAGUUGAUGA....AA..C..U..A.A..AGUG..AA..UGAA......CU...A....AU.......UGCUUC.UGCGGCUUCAGCU......UAUGAAGA....U.C...................CUAA..AG.A.AGUUAU..U...GAAUA
   NC_004347.2       UG--C..C..UG......A...A...CU...G...C.CAG...C...U.G......A...AUUAUUC.AC.U..............GA.GCA.AGC...A..GCUC..GUCGCGUGAAAAU...............................................CGGUC.......U....G.U...UA..UUAG..GCG.AA..GUUAU..C.............................................AA.G.AC.UA..A...UG..AG.C..UGAAAGCAGAAGA....UG..A..G..C.G..UGUA..CA..AGGU......UU...A....AU.......UGCCUC.UAUGGCUUCUGCU......UACGAAGA....U.C...................CAAG..UG.A.AGUGAU..U...GCUUA
   NC_004603.1       GAAGC..U..GCug.cacA...G...CU...U...C.CAC...G...U.G......A...ACUGUUC.GA.A..............GA.ACA.AGC...U..AAGC..GUCGCGUAGUUGU...............................................UGGUC.......U....U.C...UA..CUAG..GUG.AA..GUAAU..C.............................................AA.G.UC.UG..A...AG..AG.C..UAAAAGCGGACGA....CG..A..G..A.A..AGUU..AA..AGCU......CU...A....AU.......CGAAGA.AAUGGCUACUGCA......UACGAAGA....U.C...................CAUC..AG.A.AGUUAU..U...GCUUA
   NC_005126.1       AGCUU..U..GG......A...A...CU...G...C.CUC...G...U.G......A...ACUGUUU.GA.A..............GA.ACA.AGC...U..AAGC..GUCGCGUUGUUGU...............................................UGGUU.......U....G.U...UA..UUAG..GCG.AA..GUUAU..C.............................................AG.U.AG.UA..A...UG..AG.C..UGAAAGCUGAUGA....AG..A..A..C.G..UGUU..AA..AGCA......UU...A....AU.......UGAGGA.AAUGGCUUCUGCC......UAUGAAGC....U.C...................CUCA..AG.A.AGUGAU..C...GAAUU
   NC_006300.1       AGCGG..C..GC......A...A...UU...A...C.CUC...G...C.G......A...AUUAUUC.GA.A..............GA.ACA.GGC...A..AAAC..GUCGCGUUCAAGU...............................................AGGCC.......U....U.U...UA..UUAG..CUG.AA..GUGAU..U.............................................UC.U.UC.AA..A...CG..AA.U..UAAAAGCUGACGA....AG..A..A..A.A..AGCA..AA..AGCG......AU...G....AU.......CGAAGA.UAUUGCCUCCGCU......UAUGAACA....A.C...................CGGC..CG.A.AGUUGU..U...G----
   NC_006512.1       AAUGC..C..UG......A...C...UU...G...C.CGG...C...G.G......A...GCUGUUC.GA.A..............GA.ACA.AGC...G..AAAG..AGCGUGUUAAAGU...............................................UGGUU.......U....G.U...UA..UUAG..GUG.AA..GUGAU..U.............................................CG.U.GG.UA..A...CG..AG.C..UUAAAGCUGAUGA....UG..A..G.aA.A..GUUG..AU.gAAAU......CA...-....-U.......CGCAAC.GGCAGCUUCUGCU......UAUGAAGA....C.C...................CGCA..GG.A.AGUUGU..G...GAAUA
   NC_007481.1       UGC-C..U..GA......G...C...UU...C...C.UGC...U...-.G......A...AUUGUUC.CA.U..............GA.GCA.AGC...A..GUAA..CACGUGUUAAAAC...............................................UGGCC.......U....U.U...UA..UUAG..GUG.AA..GUGAU..U.............................................AA.A.GC.UA..A...CG..AG.A..UUAAAGUUGACGA....CG..C..U..A.A..AGUU..GA..AGCA......UU...A....AU.......CGCAAC.GGUAGCUUCUGCA......UACGAAGA....U.C...................CAAC..UG.A.AGUAGU..A...GAAUA
   NC_007712.1       GGCGC..U..AG......A...A...UU...A...C.CGC...G...C.G......A...GCUGUUU.GA.A..............GA.GCA.GGC...G..AAGC..GCCGCGUCAAGGU...............................................CGGUC.......U....G.C...UG..CUGG..GUG.AA..GUCAU..C.............................................CG.C.AA.AC..A...UG..AA.C..UGAAAGCGGAUGA....AG..C..C..C.G..CGUC..AG..CGCG......CU...G....AU.......UGAAGA.AAUGGCGUCCGCC......UAUGAAGA....U.C...................CGAA..AG.A.AGUCAU..C...GAGUU
   NC_007954.1       UG--C..C..UG......A...G...CU...U...C.CUG...C...U.G......A...ACUAUUC.AC.U..............GA.ACA.AGC...U..GAGC..GUCGCGUUAAAAU...............................................CGGUC.......U....A.U...UA..UUAG..GCG.AA..GUGAU..C.............................................AA.G.AC.UA..G...CG..AA.U..UAAAAGCUGAAGA....CU..C..C..C.G..CGUU..CA..AGCG......CU...A....AU.......CGCGUC.UAUGGCUUCUGCU......UAUGAAGA....U.C...................CAGC..UG.A.AGUAGU..U...GCUUA
   NC_008027.1       UGAGC..A..G-......-...-...CU...G...C.CGG...C...C.G......A...ACUGUUC.GA.A..............GA.GCA.AGC...C..AAGC..GCCGCGUCGUGCU...............................................GGGCC.......U....G.A...UC..-GUC..GCCgAA..GUGGU..-caag.................................caguu...--.-.--.--..-...CG..AG.C..UGAAGCCUGAUGA....AG..C..AgaA.G..UUCG..CA..AGG-......-U...G....AU.......CGAGGA.AAUGGCCUCGGCU......UAUCAAGA....G.C..................cUGAG..C-.A.GGUCGU..U...GCCUG
   NC_008345.1       UGCC-..U..GA......A...C...UU...C...C.GGC...-...U.G......A...ACUUUUC.AC.U..............GA.ACA.AGC...U..GAGC..GUCGUGUUAAAAU...............................................UGGUU.......U....G.C...UA..UUAG..GCG.AA..GUGAU..C.............................................AA.G.AC.AA..A...CG..AG.C..UAAAAGCAGAAGA....UG..A..U..C.G..UGUU..AA..UACA......UU...G....AU.......CGAAUC.UAUGGCUUCAGCG......UAUGAAGA....U.C...................CAUC..UG.A.AGUUGU..U...UCAUA
   NC_008700.1       UG--C..C..UG......A...G...CU...G...C.CAG...C...C.G......A...GUUGUUU.GC.U..............GA.GCA.AGC...C..GAGC..GCCGUGUAAAAGU...............................................GGGCC.......U....G.C...UG..CUGG..GUG.AA..GUUAU..C.............................................AA.A.UC.UA..C...CG..AG.C..UGAAAGUAGAAGA....AG..A..A..C.G..CGUU..CA..GGCG......CU...G....AU.......CGCUUC.UAUGGCUUCUGCC......UACGAAGA....U.C...................CAGC..CG.A.AGUGAU..U...GAAUA
   NC_009092.1       UG--C..C..UG......A...G...CU...A...C.CUG...C...U.G......A...CCUGUUC.AC.C..............GA.GCA.AGC...C..GAGC..GCCGCGUAAAAGU...............................................GGGUC.......U....G.C...UA..CUUG..GCG.AA..GUGAU..C.............................................AA.G.AC.UA..A...CG..AG.C..UGAAAGCUGACGA....CG..A..G..C.G..UGUU..CA..AGCG......CU...G....AU.......CGCUUC.UAUGGCUUCUGCC......UACGAAGA....U.C...................CACA..GG.A.AGUUAU..U...GAAUA
   NC_009792.1       AGCGC..U..GG......A...A...CU...G...C.CGC...G...U.G......A...ACUGUUC.GA.A..............GA.ACA.GGC...U..AAGC..GUCGCGUUGUUGU...............................................CGGCC.......U....G.C...UG..CUGG..GCG.AA..GUGAU..U.............................................CG.C.AC.UC..A...GG..AG.C..UGAAAGCUGACGA....AG..A..G..C.G..CGUU..AA..AGGU......CU...G....AU.......CGAAGA.GAUGGCUUCUGCG......UACGAAGA....U.C...................CGAA..AG.A.AGUUAU..C...GAGUU
   NC_009831.1       CAUGC..C..UG......A...A...CU...A...C.CAG...C...U.G......A...UCUGUUC.AC.A..............GA.ACA.AGC...A..GAGC..GUCGUGUAAAAGU...............................................AGGCC.......U....G.U...UA..CUAG..GUG.AA..GUCAU..U.............................................AA.G.AC.UA..A...UG..AG.C..UGAAAGCUGAAGA....UG..A..U..C.G..UGUU..CA..AUCA......CU...U....AU.......CGCUUC.UAUGGCUUCUGCU......UAUGAAGA....U.C...................CAAG..UG.A.AGUUGU..U...GCUUA
   NC_009901.1       UGC-C..U..GA......G...C...UU...C...C.AGC...-...U.G......A...CCUGUUC.AC.U..............GA.ACA.AGC...U..GCAC..GUCGCGUUAAAGU...............................................AGGUC.......U....A.C...UA..CUUG..GCG.AA..GUGAU..C.............................................AA.G.AC.UA..A...CG..AG.C..UAAAAGCUGAAGA....UG..A..A..C.G..CGUU..CA..AGGU......UU...G....AU.......CGCUUC.AAUGGCUUCUGCU......UACGAAGA....U.C...................CAAG..UG.A.AGUUGU..A...GCUUA
   NC_010334.1       CAUGC..C..UG......A...G...CU...A...C.CAG...C...U.G......A...UCUAUUC.AC.U..............GA.GCA.AGC...U..GCAC..GUCGCGUUAAAGU...............................................AGGUC.......U....A.C...UA..CUUG..GCG.AA..GUGAU..C.............................................AA.G.GC.AA..A...CG..AG.C..UAAAAGCUGAAGA....CG..A..A..C.G..UGUU..CA..AGCU......UU...G....AU.......CGCUUC.UAUGGCUUCUGCA......UAUGAAGA....U.C...................CAAG..UG.A.AGUUGU..A...GCAUA
   NC_010506.1       UG--C..C..AG......A...A...CU...U...C.CAG...C...U.G......A...UUUAUUU.AC.U..............GA.ACA.AGC...U..GAAC..GUCGCGUAAAAGU...............................................UGGUC.......U....A.U...UA..UUGG..GUG.AA..GUCAU..C.............................................AA.G.AC.UA..A...CG..AG.C..UGAAAGCUGAAGA....AG..A..G..C.G..AGUU..CA..AGGA......CU...U....AU.......CGCUUC.UAUGGCUUCUGCA......UACGAAGA....U.C...................CAAG..UG.A.AGUUGU..U...GAAUA
   NC_010519.1       AGCUG..C..AC......A...A...UU...A...C.CAC...G...U.G......A...AUUAUUC.GA.A..............GA.ACA.AGC...U..AAAC..GCCGUGUUCAGGU...............................................UGGUU.......U....A.U...UA..UUCU..CUG.AA..GUCAU..C.............................................UC.U.UC.UA..A...UG..AG.U..UAAAGGCUGAUGA....AG..A..A..C.G..UGUU..AA..AGCG......AU...G....AU.......CGCAGA.UAUUGCAUCAGCU......UAUGAACA....AcC...................AGCA..-G.A.AGUGAU..U...GAAUA
   NC_010554.1       AGCUC..U..GC......A...A...UU...A...C.CAC...G...U.G......A...AUUGUUC.GA.A..............GA.ACA.AGC...A..AAAC..GUCGUGUUAUCGU...............................................UGGAU.......U....A.C...UG..UUAG..GUG.AA..GUGAU..C.............................................AA.U.AG.UA..A...UG..AA.C..UGAAAGCAGAAGA....CG..A..G..C.G..UGUG..AA..AGCG......UU...G....AU.......CGACGA.AAUGGCUUCAGCU......UAUGAAGA....U.C...................CAUC..AG.A.AGUUGU..U...GAGUU
   NC_010681.1       U-GCG..C..CG......A...U...CC...-...-.CGG...C...U.G......C...GAUGUUC.AA.G..............GA.ACA.GGC...U..GAGC..GCCGCGUGAAGCU...............................................GGGCC.......U....C.G...UG..CUGG..CCG.AA..CUGGU..C.............................................AA.G.GC.CA..A...CG..AA.C..UGCAAGCCAAGCC....GG..A..G..C.A..----..--..GAUU......CG...U....GC.......CGAAGUcGACGAAUUC-GCGaaaagcUACGAAGA....C.C...................CGAA..GG.A.AGUCGU..C...CGCUG
   NC_010694.1       GGCUC..U..UG......A...A...CU...U...C.CUC...G...U.G......A...ACUGUUU.GA.A..............GA.GCA.GGC...A..AAAC..GCCGCGUAGUGGU...............................................GGGUC.......U....U.C...UG..CUGG..GUG.AA..GUUAU..U.............................................CG.C.AC.UC..A...CG..AG.U..UAAAAGCUGACGA....AA..C..C..C.G..CGUU..AA..CGCA......UU...G....AU.......CGAAGA.GAUGGCUUCAGCU......UACGAAGA....U.C...................CAUC..AG.A.AGUGAU..C...GAGUU
   NC_011312.1       AGCUC..C..UG......A...G...CU...U...C.CAC...G...U.G......A...AUUGUUC.GA.A..............GA.ACA.AGC...U..AAGC..GUCGUGUAGUUGU...............................................AGGUC.......U....U.C...UU..CUUG..GUG.AA..GUAAU..C.............................................AA.A.AC.UG..A...AG..AA.C..UAAAAGCUGACGA....UG..A..G..A.A..AGUA..AA..AGCA......CU...U....AU.......CAACGA.AAUGGCUUCUGCU......UACGAAGA....U.C...................CAAC..UG.A.AGUUGU..U...GCUU-
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   NZ_CP065178.1     AGCGC..A..GG......A...A...UU...A...C.CGC...G...U.G......A...GCUGUUC.GA.A..............GA.GCA.AGC...U..AAAC..GUCGUGUUGUUAU...............................................CGGUC.......U....G.U...UG..CUGG..GUG.AA..GUUAU..C.............................................AG.C.AC.CA..A...UG..AG.C..UGAAAGCUGACGA....AG..A..A..C.G..CGUU..AA..UGCG......CU...G....AU.......CGAAGA.GAUGGCUUCUGCU......UACGAAGA....U.C...................CGCA..GG.A.AGUUAU..C...GAGUU
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   NZ_CP065626.1     GGCGA..U..GG......A...A...CU...G...C.CGC...G...C.G......A...ACUGUUC.GA.A..............GA.GCA.GGC...U..AAGC..GUCGUGUCAUCGU...............................................CGGUC.......U....G.C...UG..CUGG..GCG.AA..GUGAU..C.............................................AG.C.AA.GA..A...CG..AA.C..UGAAAGCGGACGA....CG..C..U..C.G..CGUU..AA..CGCA......CU...G....AU.......CGAAGA.GAUGGCUUCUGCC......UACGAAGA....U.C...................CGCA..GG.A.AGUGAU..C...GAGUU
   NZ_CP065640.1     AGCGC..U..GG......A...A...CU...G...C.CGC...G...C.G......A...ACUGUUC.GA.A..............GA.ACA.GGC...C..AAGC..GUCGCGUUGUUGU...............................................CGGCC.......U....G.C...UG..CUGG..GCG.AA..GUGAU..C.............................................AG.C.AC.CA..A...CG..AG.C..UGAAAGCUGACGA....AG..A..C..C.G..UGUG..AA..AGCG......CU...G....AU.......CGAAGA.GAUGGCGUCCGCU......UACGAAGA....U.C...................CAAG..CG.A.AGUUAU..C...GAGUU
   NZ_CP065651.1     CGCUC.cU..GA......A...C...UG...C...C.GGC...-...C.G......A...GCUGUUC.CA.G..............GG.UCA.GGC...C..GAGC..GUCGCGUACGCGU...............................................AGGUC.......U....G.C...UG..CUGG..GCG.AC..GUGAU..C.............................................CG.U.AC.CA..A...CG..AG.A..UCAAGGCUGAUGA....AG..C..G..C.G..CGUC..AA..CAGC......AU...C....AU.......CGAAUC.CAUGGCCACUGCC......UACGAAGA....U.C...................CGAA..GG.A.AGUGAU..C...GAGUA
   NZ_CP065720.1     GCCUG..A..CC......A...G...CU...G...C.CGG...C...C.G......A...GCUGUUC.CA.G..............GA.GCA.GGC...C..AAGC..GCCGCGUCGUGCU...............................................GGGUC.......U....G.A...UC..GUCG..CUG.AG..GUGGU..C.............................................AA.G.CA.GA..A...CG..AG.C..UCAAGCCCGACGA....AG..CacG..C.G..UUCG..CG..AGCU......--...G....AU.......CGAGGA.GAUGGCGUCUGCU......UACCAGGA....G.C...................CGGAgcAG.G.UGGUGG..C...CUGGU
   NZ_CP065745.1     CGCUC..C..CG......A...G...CU...G...C.CGG...C...U.G......A...ACUGUUC.CA.G..............GC.GCA.AGC...C..GAGC..GUCGUGUACGCGU...............................................UGGCC.......U....G.C...UG..CUGG..GCG.AC..GUGAU..C.............................................CG.C.AC.CA..A...CG..AG.A..UCAAGGCUGACGA....UG..C..C..C.G..CGUA..AC..CAGC......AU...C....AU.......CGAGUC.CAUGGCGACUGCC......UACGAAGA....U.C...................CGAA..GG.A.AGUGAU..C...GAGUA
   NZ_CP065838.1     GGCCC..U..GG......A...A...CU...G...C.CGC...G...C.G......A...ACUGUUC.GA.A..............GA.GCA.GGC...U..AAAC..GCCGCGUAGUGGU...............................................UGGCC.......U....G.C...UG..CUGG..GCG.AA..GUGAU..U.............................................CG.C.AC.CA..A...CG..AG.C..UGAAAGCUGACGA....AG..A..G..C.G..CGUG..AA..AGGC......CU...G....AU.......CGAAGA.GAUGGCUUCUGCU......UACGAAGA....U.C...................CGUC..AG.A.AGUGGU..U...GAGUU
   NZ_CP066075.1     U-GCG..C..CG......A...U...C-...-...C.CGC...C...G.G......C...AAUGUUC.AA.G..............GA.GCA.GGC...A..GAGC..GCCGCGUCAAGCU...............................................GGGCC.......U....C.G...UG..CUGG..CUG.AG..CUGGU..C.............................................AA.G.GC.CA..A...CG..AA.C..UGCAGGC----GA....--..A..G..C.C..GGAG..CA..GAUU......CG...C....GC.......CGAAGUcGACGAAUUC-GCGaaaagcUACGAAGA....C.C...................CGAA..GG.A.AGUCGU..C...CGCUG
   NZ_CP066092.1     CGCUC..C..GG......A...G...CU...G...C.CGG...C...U.G......A...GCUGUUC.CA.G..............GC.UCA.GGC...C..GAGC..GUCGUGUACGCGU...............................................AGGUC.......U....G.C...UG..CUGG..GCG.AC..GUGAU..C.............................................CG.C.AC.CA..A...CG..AA.A..UCAAGGCUGACGA....UG..C..U..C.G..CGUG..AC..CAGC......AU...C....AU.......CGAAUC.CAUGGCGACUGCG......UACGAAGA....U.C...................CGAA..AG.A.AGUGAU..C...GAGUA
   NZ_CP068551.1     AGCCA..G..AC.....cA...A...CU...G...C.CGG...C...C.G......A...ACUGUUC.GA.A..............GA.ACA.AGC...C..AAGC..GUCGCGUCGUGCU...............................................GGGCC.......U....G.A..uCG..U--C..GCGgAA..GUGGU..-c.......................................aa...-G.C.AG.UU..-...CG..AG.C..UGAAGCCUGACGA....GG..C..C..C.G..UGUG..CG..CGAG......CU...G....AU.......CGAAGA.GAUGGCCUCCGCC......UACCAGGA....G.C...............c.cgAGCA..AG.U.GGUCGC..C...UGGUA
   NZ_CP069161.1     CAUGC..C..-G......U...U...CC...-...-.CGC...C...G.G......A...ACUGUUC.GC.C..............GA.GCA.GGC...C..GAAC..GCCGCGUGGCUCU...............................................GGGUC.......U....G.A...UC..CUGG..CGG.AU..CUCGU..C.............................................GA.G.GC.CA..A...CA..AG.C..UGGAAGCCAAGCC....CG..A..G..C.A..GGUG..AA..GGCG......CU...G....GU.......CGAAGA.GUUCGC--CGACAg....cUAUGAGGA....A.C...................CGGC..CG.A.CGUGAU..C...GCCUG
   NZ_CP069213.1     CAUGC..C..UG......A...G...CU...G...C.CAG...C...U.G......A...GUUGUUU.GC.U..............GA.GCA.AGC...C..GAGC..GCCGCGUAAAAGU...............................................AGGUC.......U....G.C...UG..CUGG..GCG.AA..GUUAU..C.............................................AA.G.UC.UA..C...CG..AG.C..UGAAAGUAGAAGA....AG..A..U..C.G..CGUU..CA..GGCG......CU...G....AU.......UGCUUC.CAUGGCUUCUGCC......UAUGAAGA....U.C...................CAGC..CG.A.AGUGAU..U...GAAUA
   NZ_CP069510.1     AGCAC..A..AU......U...A...C-...-...-.CAG...C...U.G......A...AUUAUUU.GA.A..............AC.AGA.AGC...A..AAAC..GCCGUGUUCAAGU...............................................AGGUU.......U....A.U...UG..CU-U..UCA.AC..GGUAA..U.............................................UG.G.UGcUA..A...CG..AA.U..UAAAAGUGGAUGA....AG..C..A..C.G..CGUU..GA..AGCG......AU...G....AU.......CGCAGA.UAUCGCAUCAGCU......UACGAGCA....A.C...................CAGC..UG.A.AGUAGU..A...GAAUA
   NZ_CP070290.1     AGCUC..U..GG......A...A...CU...G...C.CGC...G...U.G......A...ACUGUUU.GA.A..............GA.ACA.GGC...U..AAAC..GCCGUGUUGUAGU...............................................UGGCC.......U....G.C...UG..CUGG..GCG.AA..GUUAU..C.............................................CG.C.AC.CA..A...CG..AG.C..UGAAAGCUGACGA....AG..A..G..C.G..UGUG..AA..AGGU......CU...G....AU.......CGAAGA.GAUGGCUUCUGCG......UAUGAAGA....G.C...................CGAA..AG.A.AGUUAU..U...GAGUU
   NZ_CP070503.1     AGCCA..G..AC.....cA...A...CU...G...C.CGG...C...C.G......A...GCUGUUC.GA.A..............GA.GCA.AGC...C..AAGC..GCCGCGUCGUGCU...............................................GGGCC.......U....G.A..uCG..UUG-..CUG.AA..GUGGU..C.............................................A-.-.AG.CA..Gu.uCG..AC.C..UCAAGCCUGACGA....AG..C..UcgC.G..UUCG..CG..AAA-......-U...G....AU.......UCAGGA.AAUGGCUUCCGCU......UACCAGGA....G.C...................CAGA..GC.A.GGUCGU..G...UC---
   NZ_CP070505.1     CAAGC..C..UGa...ccA...A...CU...G...C.CGG...C...C.G......A...GCUGUUC.GA.A..............GA.GCA.AGC...C..AAGC..GCCGUGUGGUGCU...............................................GGGCC.......U....GaU...CG..U--C..GCCgAA..GUGGU..C............................................aAG.C.AG.U-..U...CG..AA.C..UGAAGCCUGACGA....AG..C..C..C.G..CGUG..CG..CGAG......CU...G....AU.......CGAGGA.AAUGGCUUCGGCU......UAUCAGGA....G.C..................cCGAG..-C.A.GGUCGU..U...GCCUG
   NZ_CP071070.1     AGCGC..U..GG......A...A...CU...G...C.CGC...G...C.G......A...ACUGUUC.GA.A..............GA.ACA.GGC...U..AAAC..GCCGCGUCGUUGU...............................................UGGCC.......U....G.C...UG..CUGG..GCG.AA..GUGAU..U.............................................CG.C.AC.UA..A...CG..AG.C..UGAAAGCUGACGA....AG..A..G..C.G..CGUA..AA..AGGC......CU...G....AU.......CGAAGA.GAUGGCUUCUGCG......UACGAAGA....U.C...................CGAA..AG.A.AGUGAU..C...GAGUU
   NZ_CP071320.1     AGCGC..U..GG......A...A...CU...G...C.CAC...G...C.G......A...GCUGUUC.GA.A..............GA.GCA.AGC...C..AAAC..GCCGCGUAGUGGU...............................................UGGCC.......U....G.C...UG..CUGG..GCG.AA..GUGAU..C.............................................AG.C.AC.CA..A...CG..AU.C..UGAAAGCUGACGA....AG..A..C..C.G..CGUG..AA..GACG......CU...G....AU.......CGAAGA.AAUGGCCUCCGCC......UACGAAGA....U.C...................CGAG..CG.A.AGUCAU..U...GAGUU
   NZ_CP071325.1     CGCAC..C..UG......A...A...CU...G...C.CAC...G...U.G......A...GCUGUUC.GA.A..............GA.GCA.AGC...U..AAGC..GCCGCGUAGUUGU...............................................UGGCC.......U....G.C...UG..CUGG..GUG.AA..GUGAU..C.............................................AA.G.UC.UG..A...AG..AG.C..UGAAAGUUGAUGA....AG..A..G..C.G..CGUU..AA..AGCA......AU...C....AU.......CGCUGA.AAUGGCUUCUGCA......UACGAAGA....U.C...................CAUC..AG.A.AGUUGU..U...GCUUA
   NZ_CP071383.1     AGCGC..U..GG......A...A...CU...G...C.CAC...G...U.G......A...ACUGUUC.GA.A..............GA.GCA.AGC...G..AAAC..GUCGCGUUGUUGU...............................................UGGCC.......U....G.C...UG..CUGG..GCG.AA..GUGAU..U.............................................CG.U.AC.CC..A...CG..AA.C..UGAAAGCUGACGA....AG..A..G..C.G..CGUA..AA..AGGC......CU...G....AU.......CGAAGA.GAUGGCUUCCGCU......UACGAAGA....U.C...................CAGC..AG.A.AGUGGU..U...GAGUU
   NZ_CP071405.1     GGCGC..U..GG......A...A...CU...G...C.CAC...G...C.G......A...ACUGUUU.GA.A..............GA.GCA.GGC...U..AAAC..GCCGUGUGGUUGU...............................................CGGUC.......U....U.C...UG..CUGG..GCG.AA..GUGAU..U.............................................CG.U.AC.CC..A...CG..AG.C..UGAAAGCAGACGA....CG..C..G..C.G..CGUG..AA..CACC......AU...G....AU.......UGAAGA.GAUGGCUUCUGCG......UAUGAAGA....U.C...................CGCA..GG.A.AGUGAU..C...GAGUU
   NZ_CP071409.1     AGCUU..U..UG......A...A...CU...G...C.CUC...G...U.G......A...GUUGUUC.GA.A..............GA.GCA.GGC...A..AAAC..GCCGCGUAGUAGU...............................................UGGAC.......U....G.C...UG..UUGG..GCG.AA..GUGAU..U.............................................CG.U.AC.UC..A...UG..AG.C..UGAAAGCCGAUGA....AG..A..U..C.G..CGUG..AA..AGCG......UU...G....AU.......CGAAGA.GAUGGCGUCUGCC......UAUGAAGA....U.C...................CGCA..GG.A.AGUGAU..C...GAGUU
   NZ_CP071502.1     U--GC..C..UG......A...A...CU...G...C.CAG...C...C.G......A...GCUGUUC.AC.C..............GA.GCA.AGC...C..GUAC..GCCGCGUAAAAGU...............................................GGGUC.......U....G.C...UG..CUGG..GCG.AA..GUGAU..C.............................................AA.G.AG.CA..A...CG..AG.C..UGACUGCCGAGGA....AG..A..G..C.G..CGUU..CA..AAAC......CU...G....AU.......CGCUUC.CAUGGCUUCUGCC......UACGAAGA....U.C...................CAAG..UG.A.AGUGGU..U...GCCUA
   NZ_CP071503.1     AAUGC..C..UG......A...A...CU...G...C.CAG...C...U.G......A...GCUGUUC.AC.U..............GA.ACA.AGC...U..GAGC..GCCGCGUUAAAAU...............................................CGGUC.......U....G.C...UG..UUGG..GCG.AA..GUUAU..C.............................................AA.A.GG.UA..G...CG..AG.C..UGAAAGCUGACGA....AG..A..A..C.G..CGUA..CA..AGCG......UU...G....AU.......CGCAUC.UAUGGCUUCUGCU......UAUGAAGA....U.C...................CAAA..AG.A.AGUGGU..U...GAAUA
   NZ_CP071504.1     U--GC..C..UG......A...A...CU...G...C.CAG...C...C.G......A...GCUGUUC.AC.C..............GA.GCA.AGC...C..GUAC..GCCGCGUAAAAGU...............................................GGGUC.......U....G.C...UG..CUGG..GCG.AA..GUGAU..C.............................................AA.G.AG.CA..A...CG..AG.C..UGACUGCCGAGGA....AG..A..G..C.G..CGUU..CA..AAAC......CU...G....AU.......CGCUUC.CAUGGCUUCUGCC......UACGAAGA....U.C...................CAAG..CG.A.AGUGGU..U...GCCUA
   NZ_CP071586.1     AGCCU..G..AU.....cA...A...CU...G...C.CGG...C...C.G......A...GCUGUUC.GA.A..............GA.GCA.AGC...C..AAGC..GCCGCGUCGUGCU...............................................GGGUC.......U....G.A...UC..GUUG..CUG.AA..GUGGU..C.............................................AA.G.-C.AA..-u.uCG..AC.C..UGAAGCCUGACGA....AG..C..U..C.G..CGUU..CG..CGAA......AU...G....AU.......UCAGGA.AAUGGCUUCCGCU......UACCAGGA....G.C...................CUGA..GC.A.GGUU--..-...-----
   NZ_CP071766.1     -ACUC..A..AG......C...Au.gCU...U...C.CAG...A...U.G......A...AUUGUUC.AA.A..............GA.ACA.AGC...U..GAAA..AAUCUGU------aaaacu.................................uggcgua.---UU.......G....G.U...UA..----..GCA.AA..GUAUU..-aga....................................aaa...UG.C.--.--..-...UA..AA.C..UUGAAGUAGAUCA....AG..C..G..C.G..UGUA..GA..UGCU......UA...C....AU.......CGAAGA.CAUGGCUUCUUCU......UAUGAAGA....U.C...................CAAG..CG.A.AGUGAU..U...GAAUA
   NZ_CP071802.1     AGCUG..C..UG......A...A...CU...G...C.CAC...G...U.G......A...ACUGUUC.GA.A..............GA.ACA.AGC...U..AAAC..GUCGCGUUGUUGU...............................................UGGCC.......U....G.C...UG..CUGG..GUG.AA..GUUAU..C.............................................AG.-.-C.CAgcA...CG..AG.C..UGAAAGCUGACGA....AG..A..C..C.G..CGUU..AA..GGCC......UU...G....AU.......CGAAGA.AAUGGCGUCUGCU......UACGAAGA....U.C...................CACA..AG.A.AGUUAU..C...GAGUU
   NZ_CP072110.1     UGCCU..G..--......A...G...CU...A...C.CGG...C...U.G......A...GUUAUUC.GA.G..............CA.ACA.AGC...G..AAAG..AUCGCGUACGCAC...............................................UGGUU.......U....G.U...UA..CUAG..GUG.AG..UUCAU..C.............................................CG.C.AC.UA..A...CG..AA.A..UCAAAGCGGACGA....CG..C..A..A.A..AGUU..AA..AGAA......AU...U....AU.......CGAGAC.UCAAGCGUCUGCA......UACGAAGA....U.C...................CAAC..UG.A.AGUUGU..U...AACUA
   NZ_CP072133.1     UGCCU..G..AG......-...-...CU...U...C.CAG...C...U.G......A...GCUGUUC.CA.A..............GA.CCA.AGC...U..GUUA..AACGCGUUAAGAC...............................................UGGUU.......U....A.C...UU..CUAA..GUG.AA..GUGAU..-.............................................CA.A.GU.CA..A..aCG..AA.A..UCAAAAUUGACGAcgcaAA..A..G..U.A..GUUG..--..AG--......CU...A....AU.......UGAAAC.AGUUGCUUCUGCU......UAUGAAGA....U.C...................CAAC..AG.A.AGUUGU..U...GAAUA
   NZ_CP072425.1     CAUGC..C..AG......A...G...CU...A...C.CAG...C...U.G......A...GUUGUUC.CA.U..............GA.GCA.AGC...A..GUAA..CACGCGUUAAAAC...............................................GGGUC.......U....U.C...UG..CUAG..GCG.AA..GUAAU..C.............................................AA.A.GC.GA..A...CG..AC.A..UCAAAGUAGAUGA....CG.cA..A..A.A..GUUG..-A..AGAG......CU...A....AU.......CGAAAC.AGUUGCUUCUGCU......UACGAAGA....U.C...................CAAG..CG.A.AGUAGU..U...GCUUA
   NZ_CP072455.1     AGCUU..U..GG......A...A...CU...G...C.CUC...G...U.G......A...GCUGUUU.GA.A..............GA.GCA.GGC...A..AAAC..GCCGUGUUGUUGU...............................................UGGCU.......U....A.C...UG..UUAG..GCG.AA..GUUAU..C.............................................AG.C.AG.CA..A...UG..AG.C..UGAAAGUUGAUGA....UG..A..G..C.G..UGUU..AA..UGCG......CU...G....AU.......CGAAGA.AAUGGCUUCUGCU......UAUGAAGA....U.C...................CGAA..AG.A.AGUUUU..U...GAAUA
   NZ_CP072610.1     GCCCG..A..UC......A...A...CU...G...C.CGG...C...C.G......A...GCUGUUC.GA.A..............GA.GCA.AGC...C..AAGC..GCCGUGUUGUGCU...............................................GGGUC.......U....G.A...UC..-GUC..GCUgAA..GUGGU..C............................................aAG.C.AG.UU..-...CG..AG.C..UGAAGCCCGACGA....AG..C..C..C.GugUUCG..UG..AGCU......--...G....AU.......CGAAGA.GAUGGCUUCUGCU......UACCAGGA....A.C...............c.ugAGCA..GG.U.CGUUGC..C...UGG--
   NZ_CP072652.1     AGCAC..U..GG......A...A...CU...G...C.CAC...G...C.G......A...ACUGUUU.GA.A..............GA.GCA.GGC...U..AAGC..GUCGCGUUGCUGU...............................................CGGUC.......U....G.C...UG..CUGG..GCG.AA..GUGAU..C.............................................UC.U.GC.CA..A...CA..AU.C..UGAAAGCUGACGA....AG..A..G..C.G..CGUA..AA..AACU......CU...G....AU.......UGAGGA.AAUGGCCUCCGCC......UACGAAGA....U.C...................CGCG..AG.A.AGUUGU..U...GAAUU
   NZ_CP072844.1     UGCCU..G..-A......G...C...UU...C...C.UGC...U...-.G......A...AUUAUUU.GA.G..............CA.ACA.AGC...A..AAAG..ACCGUGUUCGCAC...............................................UGGUU.......U....G.U...UA..CUUG..GUG.AA..UUCAU..U.............................................CG.C.AC.AA..A...CG..AA.A..UCAAAGCAGAUGA....CG..C..U..A.A..AGUA..AA..AGAA......AU...C....AU.......UGAAAC.UCAAGCUUCAGCU......UAUGAAGA....U.C...................CUUC..AG.A.AGUAGU..A...A----
   NZ_CP073236.1     GGCUC..U..GG......A...A...CU...G...C.CGC...G...U.G......A...GCUGUUC.GA.A..............GA.GCA.GGC...U..AAAC..GCCGCGUUGUUGU...............................................UGGCU.......U....G.C...UG..CUGG..GCG.AA..GUGAU..U.............................................CG.U.AC.CA..A...CG..AG.C..UGAAAGCUGACGA....AG..A..U..C.G..CGUG..AA..AGGC......CU...G....AU.......CGAAGA.GAUGGCUUCCGCU......UACGAAGA....U.C...................CGAA..AG.A.AGUCGU..U...GAGUU
   NZ_CP073241.1     AGAGC..A..UG......-...-...CU...U...C.CAG...A...C.G......A...AUUGUUC.AA.G..............GA.ACA.AGC...U..GAAA..-------------aau........................................cag.-----.......-....-.-...--..----..---.--..-----..-ugaaacuuggcguacuuguaagcaaaguacuugcugaugcga...--.-.--.--..-...--..AA.C..UUGAAGUUGAUCA....AG..C..G..C.G..UGUU..GA..UGCC......UA...C....AU.......CGACGA.AAUGGCGUCUUCU......UACGAAGA....U.C...................CAAC..AG.A.AGUCGU..U...GAAUA
   NZ_CP073262.1     GGCAC..U..GG......A...A...UU...A...C.CGC...G...U.G......A...ACUGUUC.GA.A..............GA.GCA.GGC...A..AAGC..GUCGCGUUGUUGU...............................................CGGUC.......U....C.C...UG..CUGG..GCG.AA..GUUAU..U.............................................CG.C.AC.UC..A...CG..AA.C..UGAAAGCAGACGA....AG..C..A..C.G..UGUG..CA..AACG......CU...G....AU.......CGAAGA.GAUGGCGUCUGCC......UACGAAGA....U.C...................CACA..GG.A.AGUCAU..C...GAGUU
   NZ_CP073587.1     GAUGC..C..AG......A...A...CU...G...CcAGC...A...-.G......A...GCUGUUU.GC.A..............GA.ACA.GGC...U..GAGC..GUCGCGUGAAGAU...............................................UGGUU.......U....G.U...UG..CUGG..GUG.AA..GUGAU..C.............................................AA.A.AC.UA..A...CG..AG.C..UGCAACCAGAAGA....UG..A..G..C.G..UGUU..CA..GGCG......CA...G....AU.......CGCUUC.UAUGGCAUCAGCA......UACGAAGA....U.C...................CAAA..AG.A.AGUGAU..C...GAAUA
   NZ_CP074346.1     CAGCC..C..--......A...A...CU...U...C.CAG...C...U.G......A...GUUAUUU.AC.A..............GA.ACA.AGC...G..AAAC..GUCGUGUUCAAGU...............................................UGGUU.......U....A.U...UG..UUCUcaUCU.GU..GAUUA..C.............................................AG.A.A-.-A..A...UG..AA.G..UAAAAGUUGAUGA....AG..A..G..C.U..UGUA..AA..AGAG......AA...A....AU.......UGCGGA.AUUAGCUUCUGCU......UACGAAGA....U.C...................CAGC..AG.A.AGUAGU..U...GAAUA
   NZ_CP074352.1     GGCUC..U..GG......A...A...CU...G...C.CGC...G...U.G......A...GCUGUUC.GA.A..............GA.GCA.GGC...U..AAAC..GCCGCGUGAUUGU...............................................UGGCC.......U....G.C...UG..CUGG..GCG.AA..GUGAU..U.............................................CG.U.AC.CC..A...CG..AG.C..UGAAAGCUGACGA....AG..A..U..C.G..CGUU..AA..AACC......CU...G....AU.......CGAAGA.GAUGGCGUCAGCC......UACGAAGA....U.C...................CAAG..CG.A.AGUUAU..C...GAGUU
   NZ_CP074570.1     UAUGC..C..UG......A...A...UU...G...C.CAG...A...U.G......A...GUUGUUC.GA.A..............GA.AAA.UGC...U..CGUC..GCCGUGUUUCUGU...............................................UGGUU.......U....A.U...UA..CUAG..GUG.AA..GUCAU..C.............................................AA.G.UC.UG..A...AG..AU.U..UGAAAGUUGAUCA....GG..C..U..C.G..CGUU..-C..AGUC......CA..uG....AU.......UGAAAC.AACUGCUUCAGCU......UAUGAAGA....U.C...................CGGC..AG.A.AGUGAU..U...GAAUA
   NZ_CP075564.1     CGCUC..C..UG......A...A...CU...G...C.CGG...C...C.G......A...GCUGUUC.CA.G..............GC.GCA.AGC...C..GAGC..GUCGCGUACGCGU...............................................UGGUC.......U....G.C...UG..CUGG..GUG.AC..GUCAU..C.............................................CG.C.AC.CA..A...CG..AG.A..UCAAGGCUGACGA....--..-..-..C.G..CCCG..UG..UGAC......CA...GcaucAU.......CGAGUC.CAUGGCCACAGCC......UACGAAGA....U.C...................CGAA..GG.A.AGUGAU..C...GAGUA
   NZ_CP076643.1     GCGGC..U..AAc....cA...A...CU...G...C.CAC...G...U.G......A...ACUGUUC.GA.A..............GA.GCA.GGC...A..AAAC..GUCGCGUAGUAGU...............................................AGGUC.......U....U.C...UG..CUGG..GUG.AA..GUGAU..C.............................................AA.A.GC.UG..A...AG..AA.C..UGAAAGCAGACGA....AG..A..G..A.A..AGUG..AA..AGCG......CU...G....AU.......CGAAGA.GAUGGCGACUGCU......UACGAAGA....U.C...................CUUC..AG.A.AGUGAU..U...GCUU-
   NZ_CP076668.1     CAAGC..C..UG......A...C...CA...A...C.UGCc.g-g.cC.G......A...GCUGUUC.GA.A..............GA.GCA.AGC...C..AAGC..GUCGUGUCGAGCU...............................................GGGCC.......U....GaU...CG..UUGC..-UG.AA..GUGGU..C.............................................--.A.AG.CA..Gu.uCG..AA.C..UCAAGCCAGACGA....CG..C..U..C.G..CGUU..CG..UGAU......CU...G....AU.......CCAGGA.AAUGGCCUCUGCC......UACCAAGA....G.C...................CUGA..GC.A.GGUUGU..U...GCCUG
   NZ_CP076686.1     UCCGC..A..GC......A...G...CU...G...C.CCA...A...G.G......A...AAUUUUC.CA.G..............GA.GCA.GGC...U..GAGC..GCCGCGUGAAGAC...............................................UGGCC.......U....G.C...UG..UUCC..AGG.AA..GUGGU..C.............................................AA.G.AA.AA..A...CG..AC.C..UGAAAGCCGACCC....G-..-..G..C.C..AAGG..-U..AGAC......GAaaaG....AU.......CCAGGA.GAUCGCGUCUACG......UAUGAACA....G.C...................CAGA..AG.A.AGUGGU..U...GCACA
   NZ_CP077073.1     AGACC..A..G-......-...-...CU...G...C.CAG...C...C.G......A...GCUGUUC.GA.A..............GA.GCA.GGC...C..AAGC..GUCGCGUGGUCCU...............................................GGGCC.......U....G.A...U-..----..---.--..-----..-cgucgccgaaguggu...........caagcaguucgaacuc...--.-.--.--..-...-A..AG.C..CUGAUGAAGCCGA....AG..U..U..C.-..---G..CA..AG--......AU...G....AU.......CGAGGA.AAUGGCCUCGGCC......UACCAGGA....G.C..................cUGAG..C-.A.GGUUGU..-...GGCCU
   NZ_CP077076.1     UGAGC..A..--......-...A...CU...G...C.CGG...C...C.G......A...GCUGUUC.UC.C..............GA.GCA.AGC...C..AAGC..GCCGCGUGGUGCU...............................................GGGCC.......U....G.A...UC..GUCG..CCG.AA..GU---..-ggucaagc..........................aguucgac...--.-.-C.--..U...GA..AG.C..CGGACGAAGCCGA....AG..U..G..C.-..---G..CA..AGGU......--...C....AU.......CGAGGA.AAUGGCCUCGGCC......UACCAAGA....A.C..................cUGAG..C-.A.GGUCGU..U...GCCUG
   NZ_CP077077.1     CAGAC..C..A-......-...G...CU...G...C.CGG...C...C.G......A...GCUGUUC.GA.G..............GA.GCA.AGC...C..AAGC..GCCGUGUGGUCCU...............................................GGGCC.......U....G.A...UC..GUUG..CCG.AA..GUGGU..-caag.................................caguu...--.-.--.--..-...CG..AC.C..UGAAGCCGGACGA....AGccA..A..G.G..UUCG..CG..AAG-......-U...C....AU.......CGAAGA.GAUGGCCUCGGCU......UACCAAGA....G.C..................cUGAG..C-.A.GGUCAU..C...GCCUG
   NZ_CP077083.1     AAGCC..U..GAc....cA...A...CU...G...C.CGG...C...C.G......A...GCUGUUC.GA.A..............GA.GCA.AGC...C..AAGC..GCCGCGUUGUGCU...............................................GGGCC.......U....G.A...UC..GUGG..CUG.AA..GUGGU..C..........................................aagCA.G.UU.CG..A...--..-C.C..UCAAGCCAGACGA....AG..A..C..C.G..UGUU..CG..CGAA......AU...G....AU.......CCAGGA.AAUGGCUUCGGCC......UACCAGGA....G.C..................cUGAG..C-.A.GGUCGU..-...GGCUU
   NZ_CP077086.1     CGGAC..C..AG......-...-...CU...G...C.CUG...C...C.G......A...AUUGUUC.GA.A..............GA.ACA.AGC...C..AAGC..GCCGCGUCGUACU...............................................GGGCC.......U....G.A...UC..-GUC..GCCgAA..GUGGU..-c.......................................aa...-G.C.AG.U-..U...CG..AG.C..UCAAGCCUGACGA....AG..CccG..C.G..UUCG..CG..AG--......CU...G....AU.......CCAGGA.AAUGGCCUCGGCC......UAUCAAGA....G.C..................cUGAG..C-.A.AGUCGU..-...GUCCU
   NZ_CP077087.1     AGCCU..G..AC.....cA...A...CU...G...C.CGG...C...C.G......A...GCUGUUC.GA.A..............GA.GCA.AGC...C..AAGC..GCCGCGUCGUGCU...............................................GGGCC.......U....G.A...UC..GUGG..CUG.AA..GUGGU..C..........................................aagCA.G.UU.CG..A...--..-C.C..UGAAGCCUGACGA....AG..C..U..C.G..UGUU..CG..UGAC......AU...G....AU.......UCAGGA.AAUGGCUUCGGCU......UAUCAAGA....G.C..................cUGAG..C-.A.GGUC--..-...-----
   NZ_CP077089.1     AGCCU..G..AU.....cA...A...CU...G...C.CGG...C...C.G......A...GCUGUUC.GA.A..............GA.GCA.AGC...C..AAGC..GCCGCGUUGUGCU...............................................GGGUC.......U....G.A...UC..GUUG..CUG.AA..GUGGU..C.............................................AA.G.-C.AA..-u.uCG..AC.C..UGAAGCCUGACGA....CG..CucG..C.G..UCCG..CG..A--A......AU...G....AU.......UCAGGA.AAUGGCUUCCGCU......UACCAGGA....G.C...................CUGA..GC.A.GGUUGU..G...UCGU-
   NZ_CP077090.1     AGCCU..G..AU.....cA...A...CU...G...C.CGG...C...C.G......A...GCUGUUC.GA.A..............GA.GCA.AGC...C..AAGC..GCCGCGUCGUGCU...............................................GGGCC.......U....G.A...UC..GUUG..CUG.AA..GUGGU..C.............................................AA.G.-C.AA..-u.uCG..AC.C..UGAAGCCUGACGA....AG..C..U..C.G..CGUU..CG..CGAA......AU...G....AU.......UCAGGA.AAUGGCUUCCGCU......UACCAGGA....G.C...................CUGA..GC.A.GGUU--..-...-----
   NZ_CP077092.1     AGCCA..G..AC.....cA...A...CU...G...C.CGG...C...C.G......A...GCUGUUC.GA.A..............GA.ACA.GGC...C..AAGC..GCCGCGUCGUGCU...............................................GGGCC.......U....G.A..uCG..UUG-..CUG.AA..GUGGU..C.............................................A-.-.AG.CA..Gu.uCG..AC.C..UCAAGCCUGACGA....AG..C..UcgC.G..UUCG..CG..AAA-......-U...G....AU.......UCAGGA.AAUGGCUUCCGCU......UACCAGGA....G.C...................CAGA..GC.A.GGUCGU..G...UC---
   NZ_CP077094.1     ACCUG..A..GC......A...A...CU...G...C.CAG...C...C.G......A...ACUGUUC.GA.A..............GA.GCA.AGC...C..AAGC..GCCGUGUGGUGCU...............................................GGGCC.......U....G.A...UC..-GUC..GCUgAA..GUGGU..C............................................aAG.C.AG.UU..-...CG..AG.C..UCAAGCCUGACGA....AG..G..C..A.A..GGUU..CG..CGAA......AU...G....AU.......CGAAGA.AAUGGCUUCGGCU......UACCAAGA....G.C..................cUGAG..C-.A.GGUCAU..Cu.cCUGGU
   NZ_CP077095.1     UGAGC..A..G-......-...-...CU...G...C.CGG...C...C.G......A...GCUGUUC.GA.A..............GA.GCA.AGC...C..AAAC..GCCGCGUGGUGCU...............................................GGGCC.......U....G.A...UC..GUCG..CUG.AA..GUGGU..C..........................................aagCA.GuUC.GA..Ac.uGA..AG.C..CCGAUGAGGCCGA....AG..U..G..C.-..---G..CA..AG--......AU...G....AU.......CGAGGA.AAUGGCCUCGGCC......UACCAAGA....G.C..................cUGAG..-C.A.GGUUGU..G...GCUUG
   NZ_CP077262.1     AGCUC..U..GG......A...A...CU...G...C.CGC...G...U.G......A...ACUGUUC.GA.A..............GA.ACA.GGC...U..AAGC..GUCGCGUAGUUGU...............................................UGGUC.......U....G.C...UG..CUGG..GCG.AA..GUGAU..U.............................................CG.U.AC.CA..A...CG..AA.C..UGAAAGCUGACGA....AG..A..U..C.G..CGUA..AA..AGGC......CU...G....AU.......CGAAGA.AAUGGCUUCUGCU......UACGAAGA....U.C...................CGAA..AG.A.AGUUGU..U...GAGUU
   NZ_CP077366.1     GGCGC..U..GG......A...A...CU...G...C.CAC...G...C.G......A...ACUGUUC.GA.A..............GA.GCA.GGC...U..AAAC..GCCGUGUGGUUGU...............................................CGGUC.......U....G.C...UG..CUGG..GCG.AA..GUGAU..U.............................................CG.U.AC.CC..A...CG..AG.C..UGAAAGCUGACGA....AG..C..A..C.G..CGU-..-A..AGCA......CCa.uG....AU.......UGAAGA.GAUGGCUUCUGCG......UAUGAAGA....U.C...................CGCA..GG.A.AGUGAU..C...GAGUU
   NZ_CP077392.1     AGCGA..U..GG......A...A...CU...G...C.CAC...G...C.G......A...GCUGUUC.GA.A..............GA.GCA.AGC...G..AAAC..GUCGCGUUGUUGU...............................................UGGCC.......U....G.C...UG..CUGG..GCG.AA..GUGAU..U.............................................CG.U.AC.CC..A...CG..AG.C..UGAAAGCUGACGA....AG..A..G..C.G..UGUG..AA..AGGC......CU...G....AU.......CGAAGA.GAUGGCUUCUGCA......UACGAAGA....U.C...................CAUC..AG.A.AGUGAU..C...GAGUU
   NZ_CP078013.1     AAGCC..U..GAc....cA...A...CU...G...C.CGG...C...C.G......A...GCUGUUC.GA.A..............GA.GCA.AGC...C..AAGC..GCCGCGUCGUGCU...............................................GGGCC.......U....G.A...UC..GUGG..CUG.AA..GUGGU..C..........................................aagCA.G.UU.CG..A...--..-C.C..UCAAGCCUGACGA....AG..A..C..C.G..CGUU..CG..CGAA......AU...G....AU.......CCAGGA.AAUGGCCUCGGCC......UACCAGGA....G.C..................cUGAG..C-.A.GGUUGU..-...GGCUU
   NZ_CP079718.1     UGC-C..U..GA......-...A...CU...G...C.CAG...C...U.G......A...AUUAUUC.AC.U..............GA.GCA.AGC...U..GCAC..GUCGCGUUAAAAU...............................................CGGUC.......U....G.U...UA..UUAG..GCG.AA..GUGAU..C.............................................AA.A.AC.UA..A...CG..AG.C..UGAAAGCGGAAGA....UG..A..G..C.G..UGUA..CA..AGGC......UU...A....AU.......CGCUUC.UAUGGCUUCUGCU......UAUGAAGA....U.C...................CAAG..UG.A.AGUGAU..U...GCGUA
   NZ_CP079742.1     AGCAC..C..CG......A...G...CU...G...C.CGG...C...U.G......A...GCUGUUC.CA.G..............GC.UCA.GGC...U..GAGC..GCCGCGUGCGCGU...............................................CGGUC.......U....G.C...UG..CUGG..GUG.AU..GUCAU..C.............................................CG.C.AC.CA..A...CG..AG.A..UCAAGGCUGAUGA....CG..C..A..C.G..CGUU..AC..CGCA......CU...G....AU.......CGAGUC.CAUGGCCACCGCC......UACGAAGA....U.C...................CGAA..GG.A.AGUGAU..C...GAGUA
   NZ_CP080328.1     UGUUA..C..CC......A...A...CU...G...C.CGA...A...C.G......A...GUUGUUC.GA.G..............GA.GCA.AGC...U..AAAG..GACGUGUUCAAGU...............................................CGGUC.......U....G.C...UG..UUGG..CCG.AA..GUGAU..C.............................................AA.A.GC.UC..A...CG..AG.U..UGGAUGCUGACGA....CG..C..U..G.A..AAUC..AA..AGCC......AA...A....GU.......CGAAGA.GCUGGCAGAGCAG......UACCAAGA....U.C...................CCAC..CG.A.AGUGGU..G...GAGUA
   NZ_CP080627.1     CGUUA..G..UC......A...A...CU...G...C.CAA...A...U.G......A...AUUGUUC.GA.A..............GC.GCA.AGC...G..AAAG..GCCGUGUUCAGGU...............................................AGGCU.......U....G.U...UG..UUGG..CUG.AG..GUUAU..C.............................................AA.A.GC.GA..A...UG..AG.U..UGGACGCUGACGA....UG..A.cG..C.G..AUU-..AA..AGCU......AA...A....GU.......UGAAGA.ACUGGCAGAGCAG......UACCAGGA....U.C...................CUUC..CG.A.GGUGGU..U...GAGUA
   NZ_CP081832.1     AAUGC..C..UG......A...A...UU...G...C.CGG...C...U.G......A...GUUGUUU.GA.A..............GA.GCA.GGC...A..AAAG..AGCGCGUUAAAGU...............................................UGGCU.......U....G.U...UA..UUGG..GCG.AA..GUUAU..U.............................................CG.C.AG.CA..A...UG..AG.C..UUAAAGCUGACGA....CG..A..G.aA.A..GUUG..AU..GAGA.....uCA...U....UG.......CGA--C.AGCUGCUUCUGCA......UAUGAAGA....C.C...................CGCA..GG.A.AGUUGU..C...GAGUA
   NZ_CP081860.1     CAUGC..C..UG......A...G...CU...U...C.CUG...C...U.G......A...GCUAUUC.CA.C..............GA.GCA.AGC...A..GUAA..CUCGCGUGAAAAC...............................................UGGCC.......U....A.C...UA..CUAG..GUG.AA..GUGAU..C.............................................AA.A.GC.GA..A...CG..AC.A..UCAAAGUUGAUGA....AG..A..U..A.A..GGUU..GC..UGAA......CU...A....AU.......CGACAC.AGUUGCUUCUGCA......UACGAAGA....U.C...................CAAG..UG.A.AGUAGU..G...GCAUA
   NZ_CP081864.1     AGCGG..C..UG......A...A...CU...G...C.CGC...G...U.G......A...GCUGUUU.GA.A..............GA.GCA.AGC...C..AAAC..GCCGCGUUGUCGU...............................................AGGUC.......U....G.C...UG..CUGG..GCG.AA..GUGAU..C.............................................AG.C.AC.CA..A...CG..AA.C..UGAAAGCAGAUGA....CG..C..U..C.G..CGUU..AA..CGCG......CU...G....AU.......CGAAGA.GAUGGCUUCUGCC......UACGAAGA....U.C...................CGCA..GG.A.AGUGGU..U...--GCU
   NZ_CP082141.1     GGCUC..U..GG......A...G...CU...G...C.CUC...G...U.G......A...ACUGUUC.GA.A..............GA.GCA.GGC...U..AAAC..GCCGUGUCGUGGU...............................................UGGCC.......U....G.C...UG..CUGG..GCG.AA..GUGAU..U.............................................CG.U.AC.CC..A...UG..AG.C..UGAAAGCUGACGA....AG..A..C..C.G..UGUC..AA..AGCG......CU...G....AU.......CGAAGA.GAUGGCUUCUGCG......UAUGAAGA....C.C...................CGUC..AG.A.AGUGAU..C...GAGUU
   NZ_CP082346.1     GGCGC..U..GG......A...A...CU...G...C.CAC...G...U.G......A...ACUGUUC.GA.A..............GA.GCA.GGC...A..AAAC..GUCGCGUUGUGGU...............................................CGGUC.......U....G.C...UG..CUGG..GCG.AA..GUAAU..U.............................................CG.C.AU.CA..A...CG..AG.C..UGAAAGCCGAUGA....AG..A..U..C.G..CGUU..AA..AGCG......CU...G....AU.......CGAAGA.GAUGGCUUCUGCG......UACGAAGA....U.C...................CGCA..GG.A.AGUGAU..C...GAGUU
   NZ_CP082787.1     AGCGC..U..GG......A...A...CU...G...C.CAC...G...C.G......A...ACUGUUC.GA.A..............GA.GCA.GGC...C..AAGC..GCCGCGUUGUGGU...............................................CGGUC.......U....G.C...UG..CUGG..GCG.AA..GUGAU..C.............................................AG.C.AC.CA..A...CG..AU.C..UGAAAGCUGACGA....AG..A..U..C.G..CGUG..AA..AACC......CU...G....AU.......CGAAGA.AAUGGCAUCCGCC......UACGAAGA....U.C...................CAAG..CG.A.AGUUGU..U...GAGUU
   NZ_CP082833.1     GGCGC..U..GG......A...A...CU...G...C.CGC...G...C.G......A...GCUGUUC.GA.A..............GA.ACA.GGC...U..AAGC..GUCGCGUUGUGGU...............................................CGGCC.......U....G.C...UG..CUGG..GCG.AA..GUGAU..U.............................................CG.C.AC.CA..A...CG..AG.C..UGAAAGCUGACGA....AG..A..G..C.G..CGUA..AA..AGGC......CU...G....AU.......CGAAGA.GAUGGCUUCCGCU......UACGAAGA....U.C...................CGAA..AG.A.AGUGAU..C...GAGUU
   NZ_CP082926.1     UGC-C..U..GA......G...C...UU...C...C.UGC...-...U.G......A...AUUAUUC.AC.A..............GA.GCA.AGC...A..GAGC..GUCGUGUUAAAAU...............................................UGGUU.......U....G.C...UA..UUAG..GCG.AA..GUGAU..C.............................................AA.A.AC.AA..A...CG..AG.C..UAAAAGCUGAAGA....CG..A..U..C.G..UGUU..AA..UGCA......UU...G....AU.......CGAAUC.UAUGGCUUCUGCG......UAUGAAGA....U.C...................CAUC..UG.A.AGUUGU..A...GCAUA
   NZ_CP083448.1     GGCGC..U..GG......A...A...CU...G...C.CAC...G...U.G......A...GCUGUUC.GA.A..............GA.GCA.GGC...A..AAAC..GUCGCGUUGUUGU...............................................AGGUC.......U....G.C...UG..CUGG..GCG.AA..GUGAU..C.............................................CG.C.AU.CA..A...CG..AG.C..UGAAAGCGGAUGA....AG..A..U..C.G..CGUU..AA..GACG......CU...G....AU.......UGAAGA.GAUGGCUUCUGCG......UAUGAAGA....U.C...................CGCA..GG.A.AGUUAU..C...GAGUU
   NZ_CP083638.1     GGCUC..U..GG......A...A...CU...G...C.CGC...G...U.G......A...ACUGUUC.GA.A..............GA.ACA.AGC...U..AAAC..GCCGCGUAGUUGU...............................................UGGCC.......U....G.C...UG..CUGG..GCG.AA..GUAAU..C.............................................CG.C.AC.CA..A...CG..AG.C..UGAAAGCUGACGA....AG..A..G..C.G..UGUG..AA..AGGC......CU...G....AU.......CGAAGA.AAUGGCUUCUGCG......UAUGAAGA....U.C...................CGAA..AG.A.AGUCAU..C...GAGUU
   NZ_CP083737.1     AGCUC..U..GG......A...A...CU...G...C.CAC...G...U.G......A...ACUGUUC.GA.A..............GA.GCA.GGC...U..AAGC..GUCGUGUUGUUGU...............................................UGGUC.......U....G.C...UG..CUGG..GCG.AA..GUUAU..-.............................................CG.CuAA.GA..A...AG..AG.C..UGAAGGCUGACGA....AG..A..U..C.G..CGUU..AA..AGCG......CU...G....AU.......CGAAGA.GAUGGCUUCUGCA......UACGAAGA....U.C...................CAAA..AG.A.AGUGAU..C...GAGUU
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   NZ_CP104755.1     U--GC..C..AG......A...A...UU...G...C.CAG...C...U.G......A...AUUAUUU.AC.U..............GA.GCA.AGC...G..GCUC..GUCGCGUGAAAAU...............................................CGGUC.......U....G.C...UA..UUAG..GCG.AA..GUGAU..C.............................................AA.A.AC.UA..A...CG..AG.C..UGAAAGCGGAAGA....UG..A..G..C.G..UGUA..CA..AGGC......UU...G....AU.......UGCUUC.UAUGGCGUCUGCC......UACGAAGA....U.C...................CAAG..UG.A.AGUGAU..U...GCUUA
   NZ_CP107077.1     GGCUC..U..GG......A...A...CU...G...C.CGC...G...C.G......A...GCUGUUC.GA.A..............GA.GCA.GGC...U..AAAC..GCCGCGUUGUUGU...............................................UGGUC.......U....G.C...UG..CUGG..GCG.AA..GUGAU..U.............................................CG.C.AC.CC..A...CG..AG.C..UGAAAGCUGACGA....AG..A..G..C.G..CGUU..AA..AGGC......CU...G....AU.......CGAAGA.GAUGGCUUCUGCG......UAUGAAGA....U.C...................CGAA..AG.A.AGUGAU..C...GAGUU
   NZ_CP109947.1     AGCGC..U..GG......A...A...UU...A...C.CGC...G...U.G......A...GCUGUUU.GA.G..............GA.GCA.GGC...U..AAGC..GCCGCGUUACUAU...............................................CGGCC.......U....G.U...UA..CUGA..GUG.AA..GUCAU..C.............................................AG.C.GG.CA..A...UG..AA.C..UGAAAGCUGACGA....AG..C..G..C.G..CGUU..AA..UGCA......CU...G....AU.......CGAAGA.GAUGGCUUCUGCU......UACGAAGA....U.C...................CGCA..GG.A.AGUUAU..C...GAAUU
   NZ_FO704550.1     AGCUC..U..UG......A...A...CU...G...C.CAC...G...U.G......A...ACUGUUU.GA.A..............GA.GCA.GGC...A..AAAC..GCCGCGUUGUUGU...............................................UGGCU.......U....G.C...UG..UUAG..GCG.AA..GUUAU..C.............................................AG.C.AG.CA..A...UG..AG.C..UGAAAGUCGAAGA....AG..A..U..C.G..CGUG..AC..UACG......UU...G....AU.......CGAAGA.AAUGGCGGCAGCU......UAUGAAGA....U.C...................CAAA..AG.A.AGUUGU..U...GAAUA
   NZ_FO704551.1     AGCUC..U..GG......A...A...CU...G...C.CAC...G...U.G......A...ACUGUUC.GA.A..............GA.GCA.GGC...U..AAAC..GCCGUGUUGUUGU...............................................UGGUU.......U....G.U...UG..UUAG..GCG.AA..GUGAU..C.............................................AG.C.AG.CA..A...UG..AG.C..UGAAAGUCGAAGA....AG..A..G..C.G..CGUU..AC..UGCG......UU...G....AU.......CGAAGA.UAUGGCAUCAGCU......UAUGAAGA....U.C...................CAAA..AG.A.AGUUGU..U...GAAUA
   NZ_HG916826.1     CAAGC..C..UGa...ccA...A...CU...G...C.CGG...C...C.G......A...GCUGUUC.GA.G..............GA.GCA.AGC...C..AAGC..GCCGUGUGGUGCU...............................................GGGCC.......U....GaU...CG..U--C..GCUgAA..GUGGU..C............................................aAG.C.AG.U-..U...CG..AA.C..UGAAACCUGACGA....AG..C..C..C.G..CGUG..CG..CGAG......CU...G....AU.......CGAAGA.GAUGGCCUCGGCU......UACCAGGA....G.C..................cUGAG..C-.A.GGUCGU..U...GCCUG
   NZ_LR134167.1     AGCGG..C..AC......A...A...UU...A...C.CAC...G...C.G......A...AUUAUUU.GA.A..............GA.GCA.AGC...A..AAAC..GCCGCGUUCAAGU...............................................UGGUU.......U....A.U...UG..CUUU..CUG.AA..GUGAU..C............................................gCA.U.-C.AA..A...UG..AA.U..UAAAAGCGGACGA....AG..C..A..C.G..CGCU..GA..CGCA......AU...G....AU.......UCAAGA.UAUUGCUUCUGCU......UACGAACA....A.C...................CAGC..AG.A.AGUGGU..G...GAAUA
   NZ_LR134201.1     GGCUC..U..GG......A...A...CU...G...C.CAC...G...U.G......A...GCUGUUC.GA.A..............GA.GCA.GGC...U..AAAC..GUCGCGUUGUUGU...............................................CGGUC.......U....G.C...UG..CUGG..GCG.AA..GUGAU..U.............................................CG.U.AC.CC..A...CG..AG.C..UGAAAGCUGACGA....AG..A..G..C.G..UGUG..AA..AGGU......CU...G....AU.......CGAAGA.GAUGGCUUCUGCC......UACGAAGA....U.C...................CGAC..UG.A.AGUCAU..C...GAGUU
   NZ_LR134327.1     AGCUG..C..AC......A...A...UU...A...C.CAC...G...U.G......A...AUUGUUU.GA.A..............GA.CCA.AGC...A..AAAC..GUCGCGUAUUGGU...............................................UGGUU.......U....A.U...UA..UUAG..CGC.AA..GUUAU..C.............................................GC.U.UC.UA..A...CG..AA.U..UAAAAGCCGAUGA....AG..A..A..C.G..UGCG..AA..AGCC......AU...G....AU.......CGAAGA.UAUCGCUUCUGCU......UACGAACA....A.C...................CGGC..UG.A.AGUGGU..U...GAAUA
   NZ_LR134374.1     ACCUG..A..-U......-...-...UU...C...C.CGC...G...G.G......A...AUUGUUU.GA.G..............GA.ACA.AGC...C..AAAC..GCCGUGUACAGCU...............................................UGGUU.......U....G.U...UA..----..---.--..-----..-uucucggaaua...................cgugaaaaaaca...--.-.--.--..-...CG..AA.C..UGGUUGCUGAA--....AA..A..U..C.A..CGUG..UA..GACGc....gAU...G....AU.......UGACAA.AUUUGCCAGUGCC......UAUGAA--....-.-agcccugaugagcuu....CGCA..AC.U.GGUA--..C...CAGGG
   NZ_LR134376.1     CGCUC..C..CG......A...G...CU...G...C.CGG...C...C.G......A...GCUGUUC.CA.G..............GC.CCA.GGC...C..GAGC..GUCGCGUCCGCGU...............................................UGGUC.......U....G.C...UG..CUGG..GUG.AU..GUCAU..C.............................................CG.C.AC.CA..A...CG..AG.A..UCAAGGCUGACGA....UG..C..C..C.G..UGUG..AC..CAGC......AU...C....AU.......CGAGUC.CAUGGCCACCGCC......UACGAAGA....U.C...................CGAA..GG.A.AGUGAU..C...GAGUA
   NZ_LR134485.1     AGCUC..U..GG......A...A...CU...G...C.CGC...G...U.G......A...ACUGUUC.GA.A..............GA.ACA.GGC...U..AAGC..GUCGCGUAGUUGU...............................................UGGUC.......U....G.C...UG..CUGG..GCG.AA..GUGAU..U.............................................CG.C.AC.CA..A...UG..AA.C..UGAAAGCUGACGA....AG..A..U..C.G..CGUU..AA..AGGC......CU...G....AU.......CGAAGA.GAUGGCUUCUGCU......UACGAAGA....U.C...................CGAA..AG.A.AGUGGU..U...GAGUU
   NZ_LR134494.1     AGCGC..U..GG......A...A...CU...G...C.CAC...G...C.G......A...ACUGUUC.GA.A..............GA.GCA.GGC...C..AAGC..GUCGCGUAGUUGU...............................................CGGUC.......U....G.C...UG..CUGG..GCG.AA..GUGAU..C.............................................AG.C.AC.CA..A...CG..AU.C..UGAAAGCUGACGA....AG..A..U..C.G..CGUU..AA..AACG......CU...G....AU.......CGAAGA.AAUGGCUUCCGCU......UACGAAGA....U.C...................CAAG..UG.A.AGUUGU..U...GAGUU
   NZ_LR134510.1     UGCUC..A..AU......U...A...C-...-...C.AGC...A...-.G......A...AUUAUUC.CA.A..............GG.UGA.AGC...A..AAAC..GUCGUGUUCAAGU...............................................AGGUU.......U....A.U...UA..CUUG..GUG.CA..-----..-uuaau................................ggcug...--.-.-A.AA..A...CA..AA.C..UUGUUGCUGAUGA....AG..C..U..C.G..UGUA..AU..UGCA......AU...G....CU.......UGAAGA.UAUGGCAUCUGCA......UACGAAAA....A.C...................CAGC..AG.A.AGUUGU..U...GAAUA
   NZ_LR134515.1     UG-GC..U..GCa....cA...A...UU...A...C.CGG...C...G.G......A...AUUAUUU.GA.A..............GC.GGA.UGC...A..AAAC..GUCGUGUUCAAGU...............................................AGGUU.......U....A.U...UA..CUUUcaACC.--..GUAAU..C.............................................GG.U.AC.CA..A...CG..AA.U..UAAAAGUUGAUGA....AA..A..A..CgU..GUUG..AA..GAAA......-C...G....AU.......UGCCGA.AAUCGCUUCGGCU......UACGAACA....A.C...................CGGC..UG.A.AGUUGU..U...GCUCA
   NZ_LR134531.1     AGCUA..U..GC......A...A...UU...G...C.CGC...G...U.G......A...AUUAUUC.GA.A..............GA.GCA.AGC...U..AAAC..GUCGCGUUAUCGU...............................................UGGUC.......U....A.U...UA..UUAG..GUG.AA..GUGAU..U.............................................CG.C.AA.GC..A...UG..AG.C..UGAAAGCCGAUCA....AA..C..U..C.G..CGUU..AA..CGCU......CU...G....AU.......UGAAGA.AAUGGCUUCUGCU......UACGAAGA....U.C...................CACA..AG.A.AGUGAU..C...GAGUU
   NZ_LR215729.2     CAAGC..C..AG......A...C...CA...A...C.UGCc.aG...CuG......A...GCUGUUC.GA.A..............GA.ACA.AGC...C..AAGC..GUCGCGUUGUACU...............................................GGGCC.......U....G.A..uCG..UUGC..-UG.AA..GUGGU..C.............................................--.A.AG.CA..Gu.uCG..AG.C..UGAAGCCGGAUGC....UG..A..C..C.G..CGUU..GC..UGAA......AU...G....AU.......CAAGGA.AAUGGCUUCGGCC......UACCAAGA....G.C..................cUGAG..C-.A.GGUUAU..U...GCCUG
   NZ_LR699007.1     GGCGA..U..GG......A...A...CU...G...C.CUC...G...C.G......A...ACUGUUU.GA.A..............GG.UCA.GGC...U..AAGC..GCCGUGUAAUGGU...............................................UGGUC.......U....G.C...UG..UUAG..GCG.AA..GUGAU..U.............................................UC.U.UC.UA..A...CG..AA.C..UGAAAGCCGAAGA....CG..A..U..C.G..CGUU..AA..UGCG......CU...G....AU.......CGACGA.AAUGGCAUCAGCG......UACGAAGA....U.C...................CGGC..UG.A.AGUUGU..G...GAAUA
   NZ_LS483250.1     UGCGC..C..AG......A...A...CU...U...C.CUG...A...U.G......A...ACUAUUC.AC.G..............GA.ACA.AGC...U..AACC..GUCGUGUUAAAAU...............................................CGGUC.......U....A.A...UA..CUUG..GUG.AA..UUCAU..C.............................................AA.A.GA.AA..A...UG..AA.A..UCACUGCAGAUGA....CA..C..A..C.G..UGUU..CA..AAAU......AU...G....AU.......CGCAUC.UAUGGCUUCUGCA......UACGAAGA....U.C...................CAGC..UG.A.AGUAAU..C...GCACA
   NZ_LS483422.1     AGCGA..U..GG......A...A...UU...A...C.CAC...G...C.G......A...ACUGUUU.GA.A..............GA.ACA.AGC...A..AAAC..GUCGUGUUGUUGU...............................................UGGCC.......U....A.U...UG..UUAG..GUG.AA..GUUAU..C.............................................AA.C.AA.GA..A...UG..AG.C..UAAAAGCCGAUGA....AG..A..U..C.G..UGUG..AA..AACA......CU...G....AU.......CGAAGA.AAUGGCAUCUGCU......UACGAAGA....U.C...................CAUC..AG.A.AGUGAU..U...GAAUA
   NZ_LS483429.1     AACUG..C..AC......A...G...UU...A...C.CAC...G...U.G......A...AUUAUUU.GA.A..............GC.UGA.AGC...A..ACUC..GUCGUGUUCAAGU...............................................GGGUU.......U....A.U...UA..UUCU..CUG.AA..GUGAU..U.............................................AA.A.UC.UA..A...UG..AA.U..UAAAAGCUGAUGA....AG..A..A..C.G..CGCC..AA..AGCA......AU...G....AU.......UGCAGA.UAUUGCAUCAGCU......UAUGAGCA....G.C..................cAGCA..-G.A.AGUUGU..G...GAAUA
   NZ_LS483443.1     AGCAG..C..AC......A...A...UU...A...C.CAC...G...C.G......A...AUUGUUU.GA.A..............GA.ACA.AGC...U..AAAC..GUCGCGUAUUAGU...............................................AGGUC.......U....A.U...UA..UUAG..CAC.AG..GUUAU..U.............................................GC.U.UC.UA..A...CG..AA.U..UAAAAGCAGAUGA....AG..A..A..C.G..UGCU..AA..AGCA......AU...G....AU.......CGAAGA.AAUCGCGUCUGCU......UACGAACA....A.C...................CGGC..AG.A.CGUGGU..U...GAAUA
   NZ_LS483458.1     AGCUG..C..AC......A...G...UU...A...C.CAC...G...U.G......A...AUUAUUU.GA.A..............GC.GGA.AGC...A..ACUC..GUCGUGUUCAAGU...............................................AGGUU.......U....A.U...UA..UUCU..CUG.AA..GUGAU..U.............................................AA.A.UC.UA..A...UG..AA.U..UAAAAGCUGAUGA....AG..A..A..C.G..CGCU..AA..AGCA......AU...G....AU.......UGCGGA.UAUUGCAUCGGCU......UACGAGCA...aC.C...................AGCA..-G.A.GGUUGU..U...GAAUA
   NZ_LS483470.1     GGCAA..U..GG......A...G...CU...G...C.CGC...G...C.G......A...ACUGUUC.GA.A..............GA.GCA.GGC...U..AAGC..GUCGCGUUCAGGU...............................................CGGUC.......U....G.C...UG..CUGG..GUG.AA..GUGAU..C.............................................CG.U.AA.AA..A...UG..AG.C..UGAAAGCCGAUCA....GG..C..U..C.G..CGUU..AG..CGCG......CU...G....AU.......UGAAGA.AAUGGCUUCUGCU......UAUGAAGA....U.C...................CACA..AG.A.GGUGAU..U...GAGUU
   NZ_LS999205.1     AG--C..C..GGa...ucA...A...CU...G...C.CAG...C...C.G......A...GCUGUUC.GA.A..............GA.GCA.GGC...C..AAGC..GUCGCGUGGUACU...............................................GGGUU.......U....G.A..uCG..UU-G..CUG.AG..GUUGU..U............................................aAG.C.AG.U-..U...CG..AU.C..UGAAGCCUGAUGA....AG..G..C..C.G..CGUU..CG..CGAG......CU...G....AU.......CCAGGA.AAUGGCUUCGGCU......UAUCAGGA....A.C..................cUGAG..C-.A.GGUCGU..G...UC-CU
   NZ_LT615367.1     GGCAC..U..UG......A...A...CU...G...C.CAC...G...C.G......A...ACUGUUU.GA.A..............GA.ACA.GGC...U..AAAC..GUCGCGUUGUUGU...............................................CGGCC.......U....G.U...UG..CUCG..GUG.AA..GUCAU..U.............................................GA.G.UC.UA..A...UG..AG.C..UGAAAGCCGAUGA....AG..A..U..C.G..CGUA..AA..CGCG......CU...G....AU.......CGACGA.AAUCGCUUCUGCC......UAUGAAGA....C.C...................CGAG..UG.A.AGUCGU..U...GAGUA
   NZ_LT855380.1     CAAGC..C..UG......A...C...CA...G...C.UGCc.g-g.cC.G......A...GCUGUUC.GA.A..............GA.GCA.GGC...C..AAGC..GCCGCGUCGAGCU...............................................GGGUC.......U....G.A..uCG..UUG-..CUG.AA..GUGGU..C.............................................A-.-.AG.CA..Gu.uCG..AC.C..UCAAGCCUGACGA....UG..C..C..C.G..CGUU..CG..UGAU......CU...G....AU.......CCAGGA.AAUGGCCUCGGCC......UACCAGGA....G.C...................CAGA..GC.A.GGUUGU..G...GCCUG
   NZ_LT906448.1     AGCUC..A..A-......-...-...UU...A...C.CAC...G...U.G......A...AUUAUUC.GA.A..............GA.ACA.AGC...A..AAAC..GUCGUGUUCAAGU...............................................UGGUU.......U....A.U...UA..UUAG..CUG.AA..GUUAU..U.............................................GC.U.UC.UA..A...UG..AA.U..UAAAAGUUGACGA....UG..C..U..C.G..UGCU..AA..AGCA......AU...G....AU.......CGAAGA.AAUCGCAUCUGCU......UAUGAGCA....A.C...................CUGC..UG.A.AGUUGU..U...GAAUA
   NZ_LT906463.1     AGCAG..C..AC......A...A...UU...A...C.CAC...G...U.G......A...AUUAUUU.GA.A..............GC.UGA.UGC...A..AAAC..GUCGCGUGCAAGU...............................................CGGUU.......U....A.U...UG..UUCU..CUG.AA..GUGAU..C.............................................AA.A.UC.AA..A...CG..AA.U..UAAAAGUUGAUGA....UG..A..A..C.G..CGCG..AA..AGCA......AU...G....AU.......UGCCGA.UAUCGCAUCAGCU......UAUGAACA....A.C...................CGGC..UG.A.AGUGAU..C...GAAUA
   NZ_LT906479.1     AGCGC..U..GG......A...A...CU...G...C.CUC...G...C.G......A...ACUGUUC.GA.A..............GA.GCA.GGC...C..AAGC..GUCGCGUGGUGGU...............................................CGGUC.......U....G.C...UG..CUGG..GCG.AA..GUGAU..C.............................................AG.C.AC.CA..A...CG..AU.C..UGAAAGCUGACGA....AG..A..C..C.G..CGUG..AA..AACG......CU...G....AU.......CGAAGA.AAUGGCUUCCGCC......UACGAAGA....U.C...................CGAG..CG.A.AGUCGU..U...GAGUU
   NZ_OU594967.1     UA--C..C..UA......A...U...UU...G...C.CAG...A...U.G......A...AUUAUUU.AG.C..............GA.ACA.AGC...A..GAAC..GCCGUGUGAAAGU...............................................UGGCC.......U....A.U...UA..UUAG..GUG.AA..GUGAU..C.............................................AA.G.GU.AA..A...UG..AA.C..UGCAAGCGGAUGA....UG..A..A..A.A..AGUU..CA..AGAG......CA...C....UU.......AAAAGA.GAUCGCUUCAGCA......UAUGAACA....A.C...................CAGA..AC.A.AGUGAU..C...GAAUA


   Structure         (((((.....((..............((.........(((...(...(.(...........((((((...................)).))).)..............((((........................................................)))).............(.(...((...(((..(((..........................................................)).)..).))......))...).).............................).)..))))......))........))........................((((((((((.((........................................))....)).).))))))..)...)))))


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tig



Position: 1133-1278, Conformation: #1







97% 90% 75% 50% Nucleotide present N N N Nucleotide identify E < 0.1 Base-pair covariation E < 0.05 Helix-level covariation 97% 90% 75%

R R Y U C C R Y G A R Y U G U U Y R A R G A R C A R G C R A R C G Y C G Y G U U G G Y Y U R Y U R Y U G Y G A A G U R U Y R R A Y G A R C U A A R G C G A Y G A G Y R G U A G U R A U Y G A R G A U R G C U C G C U A Y G A A G A C C R G A A G U R U Y G U 5'