thrU-tyrU-glyT-thrT-tufB-secE-rplK-rplA-rplJ-rplL-rpoB-rpoC-nusG



Position: 8662-8771, Conformation: #0







DMS reactivity > 1.0 0.0 0.4 0.7 G/U/No data
Position: 0 (position.label in template: 0.5')5' Position: 1 (position.label in template: 1.C) Reactivity: nanC Position: 2 (position.label in template: 2.G) Reactivity: nanG Position: 3 (position.label in template: 3.G) Reactivity: nanG Position: 4 (position.label in template: 4.U) Reactivity: nanU Position: 5 (position.label in template: 5.U) Reactivity: nanU Position: 6 (position.label in template: 6.A) Reactivity: nanA Position: 7 (position.label in template: 7.U) Reactivity: nanU Position: 8 (position.label in template: 8.C) Reactivity: nanC Position: 9 (position.label in template: 9.G) Reactivity: nanG Position: 10 (position.label in template: 10.A) Reactivity: nanA Position: 11 (position.label in template: 11.C) Reactivity: nanC Position: 12 (position.label in template: 12.G) Reactivity: nanG Position: 13 (position.label in template: 13.U) Reactivity: nanU Position: 14 (position.label in template: 14.U) Reactivity: nanU Position: 15 (position.label in template: 15.C) Reactivity: nanC Position: 16 (position.label in template: 16.A) Reactivity: nanA Position: 17 (position.label in template: 17.G) Reactivity: nanG Position: 18 (position.label in template: 18.G) Reactivity: nanG Position: 19 (position.label in template: 19.U) Reactivity: nanU Position: 20 (position.label in template: 20.C) Reactivity: nanC Position: 21 (position.label in template: 21.U) Reactivity: nanU Position: 22 (position.label in template: 22.U) Reactivity: nanU Position: 23 (position.label in template: 23.U) Reactivity: nanU Position: 24 (position.label in template: 24.A) Reactivity: nanA Position: 25 (position.label in template: 25.C) Reactivity: nanC Position: 26 (position.label in template: 26.U) Reactivity: nanU Position: 27 (position.label in template: 27.C) Reactivity: nanC Position: 28 (position.label in template: 28.G) Reactivity: nanG Position: 29 (position.label in template: 29.C) Reactivity: nanC Position: 30 (position.label in template: 30.G) Reactivity: nanG Position: 31 (position.label in template: 31.A) Reactivity: nanA Position: 32 (position.label in template: 32.U) Reactivity: nanU Position: 33 (position.label in template: 33.G) Reactivity: nanG Position: 34 (position.label in template: 34.G) Reactivity: nanG Position: 35 (position.label in template: 35.C) Reactivity: 0C Position: 36 (position.label in template: 36.G) Reactivity: nanG Position: 37 (position.label in template: 37.U) Reactivity: nanU Position: 38 (position.label in template: 38.A) Reactivity: 0.5A Position: 39 (position.label in template: 39.G) Reactivity: nanG Position: 40 (position.label in template: 40.A) Reactivity: 0A Position: 41 (position.label in template: 41.A) Reactivity: 0A Position: 42 (position.label in template: 42.A) Reactivity: 0A Position: 43 (position.label in template: 43.A) Reactivity: 0A Position: 44 (position.label in template: 44.A) Reactivity: 0A Position: 45 (position.label in template: 45.G) Reactivity: nanG Position: 46 (position.label in template: 46.A) Reactivity: 0A Position: 47 (position.label in template: 47.C) Reactivity: 0C Position: 48 (position.label in template: 48.A) Reactivity: 1A Position: 49 (position.label in template: 49.A) Reactivity: 0.5A Position: 50 (position.label in template: 50.A) Reactivity: 0.5A Position: 51 (position.label in template: 51.C) Reactivity: 0C Position: 52 (position.label in template: 52.G) Reactivity: nanG Position: 53 (position.label in template: 53.U) Reactivity: nanU Position: 54 (position.label in template: 54.G) Reactivity: nanG Position: 55 (position.label in template: 55.C) Reactivity: 0C Position: 56 (position.label in template: 56.G) Reactivity: nanG Position: 57 (position.label in template: 57.C) Reactivity: 0.5C Position: 58 (position.label in template: 58.U) Reactivity: nanU Position: 59 (position.label in template: 59.G) Reactivity: nanG Position: 60 (position.label in template: 60.G) Reactivity: nanG Position: 61 (position.label in template: 61.A) Reactivity: 0A Position: 62 (position.label in template: 62.A) Reactivity: 1A Position: 63 (position.label in template: 63.A) Reactivity: 1A Position: 64 (position.label in template: 64.U) Reactivity: nanU Position: 65 (position.label in template: 65.C) Reactivity: 0C Position: 66 (position.label in template: 66.G) Reactivity: nanG Position: 67 (position.label in template: 67.A) Reactivity: 0A Position: 68 (position.label in template: 68.A) Reactivity: 0A Position: 69 (position.label in template: 69.G) Reactivity: nanG Position: 70 (position.label in template: 70.A) Reactivity: 0A Position: 71 (position.label in template: 71.A) Reactivity: 1A Position: 72 (position.label in template: 72.A) Reactivity: 1A Position: 73 (position.label in template: 73.U) Reactivity: nanU Position: 74 (position.label in template: 74.G) Reactivity: nanG Position: 75 (position.label in template: 75.C) Reactivity: 0C Position: 76 (position.label in template: 76.A) Reactivity: 0A Position: 77 (position.label in template: 77.G) Reactivity: nanG Position: 78 (position.label in template: 78.C) Reactivity: 0C Position: 79 (position.label in template: 79.U) Reactivity: nanU Position: 80 (position.label in template: 80.C) Reactivity: 0C Position: 81 (position.label in template: 81.A) Reactivity: 0A Position: 82 (position.label in template: 82.A) Reactivity: 0.5A Position: 83 (position.label in template: 83.A) Reactivity: 0A Position: 84 (position.label in template: 84.C) Reactivity: 0C Position: 85 (position.label in template: 85.A) Reactivity: 0A Position: 86 (position.label in template: 86.G) Reactivity: nanG Position: 87 (position.label in template: 87.G) Reactivity: nanG Position: 88 (position.label in template: 88.C) Reactivity: 0C Position: 89 (position.label in template: 89.G) Reactivity: nanG Position: 90 (position.label in template: 90.A) Reactivity: 1A Position: 91 (position.label in template: 91.A) Reactivity: 1A Position: 92 (position.label in template: 92.G) Reactivity: nanG Position: 93 (position.label in template: 93.A) Reactivity: 0.5A Position: 94 (position.label in template: 94.A) Reactivity: 1A Position: 95 (position.label in template: 95.A) Reactivity: 1A Position: 96 (position.label in template: 96.G) Reactivity: nanG Position: 97 (position.label in template: 97.A) Reactivity: 1A Position: 98 (position.label in template: 98.C) Reactivity: 0C Position: 99 (position.label in template: 99.C) Reactivity: 0C Position: 100 (position.label in template: 100.U) Reactivity: nanU Position: 101 (position.label in template: 101.G) Reactivity: nanG Position: 102 (position.label in template: 102.U) Reactivity: nanU Position: 103 (position.label in template: 103.C) Reactivity: 0C Position: 104 (position.label in template: 104.U) Reactivity: nanU Position: 105 (position.label in template: 105.G) Reactivity: nanG Position: 106 (position.label in template: 106.A) Reactivity: 1A Position: 107 (position.label in template: 107.A) Reactivity: 0.5A Position: 108 (position.label in template: 108.G) Reactivity: nanG Position: 109 (position.label in template: 109.A) Reactivity: 0.5A Position: 110 (position.label in template: 110.A) Reactivity: 0.5A Position: 111 (position.label in template: 111.C) Reactivity: 0C Position: 112 (position.label in template: 112.U) Reactivity: nanU Position: 113 (position.label in template: 113.G) Reactivity: nanG Position: 114 (position.label in template: 114.C) Reactivity: 0C Position: 115 (position.label in template: 115.A) Reactivity: 0A Position: 116 (position.label in template: 116.G) Reactivity: nanG Position: 117 (position.label in template: 117.A) Reactivity: 1A Position: 118 (position.label in template: 118.U) Reactivity: nanU Position: 119 (position.label in template: 119.C) Reactivity: 0C Position: 120 (position.label in template: 120.C) Reactivity: nanC Position: 121 (position.label in template: 121.U) Reactivity: nanU Position: 122 (position.label in template: 122.C) Reactivity: nanC Position: 123 (position.label in template: 123.G) Reactivity: nanG Position: 124 (position.label in template: 124.A) Reactivity: nanA Position: 125 (position.label in template: 125.A) Reactivity: nanA Position: 126 (position.label in template: 126.G) Reactivity: nanG Position: 127 (position.label in template: 127.C) Reactivity: nanC Position: 128 (position.label in template: 128.G) Reactivity: nanG Position: 129 (position.label in template: 129.G) Reactivity: nanG Position: 130 (position.label in template: 130.G) Reactivity: nanG Position: 131 (position.label in template: 131.U) Reactivity: nanU Position: 132 (position.label in template: 132.C) Reactivity: nanC Position: 133 (position.label in template: 133.U) Reactivity: nanU Position: 134 (position.label in template: 134.G) Reactivity: nanG Position: 135 (position.label in template: 135.U) Reactivity: nanU Position: 136 (position.label in template: 136.U) Reactivity: nanU Position: 137 (position.label in template: 137.C) Reactivity: nanC Position: 138 (position.label in template: 138.A) Reactivity: nanA Position: 139 (position.label in template: 139.G) Reactivity: nanG Position: 140 (position.label in template: 140.C) Reactivity: nanC Position: 141 (position.label in template: 141.C) Reactivity: nanC Position: 142 (position.label in template: 142.G) Reactivity: nanG Position: 143 (position.label in template: 143.U) Reactivity: nanU Position: 144 (position.label in template: 144.A) Reactivity: nanA Position: 145 (position.label in template: 145.U) Reactivity: nanU Position: 146 (position.label in template: 146.C) Reactivity: nanC Position: 147 (position.label in template: 147.C) Reactivity: nanC Position: 148 (position.label in template: 148.G) Reactivity: nanG Position: 149 (position.label in template: 149.U) Reactivity: nanU Position: 150 (position.label in template: 150.G) Reactivity: nanG Position: 151 (position.label in template: 151.3')3' 10 20 30 50 100


thrU-tyrU-glyT-thrT-tufB-secE-rplK-rplA-rplJ-rplL-rpoB-rpoC-nusG



Position: 8662-8771, Conformation: #0







Retained alignments:


   NC_002977.6       UAGACGUGCAGGUCUUCACCCGCGACG........................................................GCGUGAAGAAGGAUGAACGC......GCCCGU......C.AG...AUCGA......G....G.A....A....GC.C...G.A.G..A.U..UG...AGAGGG..U....U....C..G.....C.....A.AGGA..........................................................UCUG..AACGA..UCA..G..CUCC.G.U...A....UC.A....U..C.GA...G..A.A.G.G.A.C.U.UU.-.-...U...A.C.C.........................................AG.C.gG..G.C..C.G.A
   NC_003910.7       UCGAUGUUCAAAUAUUCACCCGUGACG........................................................GCGUUGAAAAAGAUGCUCGU......GCAGUU......G.AA...AUUGA......A....C.A....A....AU.G...C.A.A..C.U..UA...AAGAAG..U....U....A..A.....G.....A.AAGA..........................................................UCUU..GGCGA..UGA..A..UUAA.G.C...A....UU.U....U..A.GA...A..G.A.U.G.G.U.A.UU.U.-...-...-.-.-acgcac..........................guacuaa..GA.A..G..U.U..A.U.U
   NC_004347.2       UCGACGUUCAGGUAUUUACCCGUGACG........................................................GCGUUGAAAAAGACAAACGC......GCCAUU......G.AA...AUCGA......A....G.A....A....AU.G...C.A.C..A.U..UG...CCCAAG..C....U....C..G.....U.....A.AAGA..........................................................CUUA..GGUGA..AG-..A..GUUC.AaG...A....UC.C....U..U.GA...A..G.A.A.G.G.U.G.UA.U.U...G...A.G.C.........................................CG.U..G..C.A..-.-.C
   NC_004556.1       UUGAUGUCCAGGUGUUCACCCGUGAUG........................................................GUAUUGAGAAGGACAAGCGU......GCGCAC......C.AG...AUCGA......A....G.A...gU....AU.G...A.A.A..-.U..CA...AGCGUG..U....C....A..A.....A.....A.AGGA..........................................................UUUU..GAUGA..UCA..A..UUUC.G.U...A....UU.C....U..A.GA...A..G.G.U.G.C.U.A.U-.U.U...-...-.-.-aug................................cucg..-U.U..U..G.C..-.-.-
   NC_004578.1       UCGACGUUCAGGUCUUCACCCGUGAUG........................................................GUGUCGAGCGUGAUGCACGU......GCUCUG......U.CC...AUUGA......G....A.A....G....UC.G...C.A.G..C.U..CG...ACGAGA..U....C....C..G.....C.....A.AGGA..........................................................UCUG..AACGA..AGA..G..UUCC.G.U...A....UU.G....U..C.GA...A..G.G.C.G.C.U.A.CU.U.U...C...G.A.A.........................................CG.U.cU..G.C..G.C.U
   NC_004603.1       UCGACGUUCAAGUCUUCACUCGCGAUG........................................................GCGUAGAGAAAGACAAGCGU......GCGCUU......G.AA...AUCGA......G....C.A....G....AU.G...C.A.G..C.U..UA...AAGAAG..C....G....A..A.....G.....A.AAGA..........................................................CCUA..ACUGA..AGA..A..UUCC.A.G...A....UU.C....U..U.GA...G..G.G.U.G.G.C.C.UU.C.U...A...A.A.C.........................................CG.U..G..U.U..A.A.A
   NC_005126.1       UCGACGUACAGGUAUUUACCCGUGAUG........................................................GUGUAGAAAAAGAUAAACGU......GCCUUG......G.AA...AUUGA......A....G.A....G....AU.G...C.A.G..C.U..GC...GUCAGG..C....U....A..A.....G.....A.AGGA..........................................................CCUG..ACAGA..AGA..G..UUGC.A.A...A....UC.U....U..U.GA...A..G.C.U.G.G.C.C.UG.U.U...U...G.C.A.........................................CG.U..A..U.C..C.G.U
   NC_006512.1       UUGACGUACAAGUAUUCACUCGUGAUG........................................................GCGUUGAAAAAGAUAAGCGC......GCGGUA......G.CG...AUUGA......A....G.A....A....AU.G...C.A.G..C.U..GG...CUAAGG..U....U....A..A.....G.....A.AAGA..........................................................CCUG..ACAGA..AGA..A..UUCA.A.G...A....UU.C....U..U.GA...A..G.A.A.G.G.U.A.UU.U.A...C...A.A.C.........................................CG.A..G..C.-..-.U.C
   NC_007204.1       UUGACGUACAAGUCUUUACCCGUGACG........................................................GUGUUGAAAAAGAUGCGCGU......GCAAGA......G.CG...AUUGA......A....A.A....A....UC.A...C.A.G..C.U..UG...AUAGCU..A....U....C..G.....U.....A.AAGA..........................................................UUUA..AAAGA..AGA..G..CUCC.G.C...A....UC.U....U..U.GA...A..G.A.A.G.C.-.-.--.-.-...-...A.G.C.........................................UC.G..U..-.-..-.-.-
   NC_007292.1       UUGAUGUACAAAUAUUUACUAGAGAUG........................................................GUAUUAAUAAAGAUAAACGU......UCAUUA......A.UA...AUUGA......A....U.C....C....GA.G...A.A.A..U.U..AA...AACAGG..U....U....A..A.....G.....A.AAGA..........................................................UUUA..AGUGA..AGA..A..UUAC.A.A...A....UU.U....U..U.GA...A..U.C.A.G.C.U.U.UA.U.U...U...G.A.U.........................................CG.U..G..U.C..U.G.C
   NC_007481.1       UUGACGUGCAAGUUUUCACCCGUGAUG........................................................GUGUUGAAAAAGAUAAGCGU......GCGUUA......G.AA...GUUGA......A....G.A....A....AU.G...C.A.G..C.U..UC...GCGAUG..C....G....A..A.....G.....A.AAGA..........................................................CUUC..AACGA..AGA..G..UUCC.G.U...A....UU.C....U..A.GA...A..G.C.U.G.G.U.G.UA.U.U...A...G.A.C.........................................CG.U..G..C.-..-.-.-
   NC_007484.1       UUGAUGUCCAGGUCUUCACCCGUGAUG........................................................GCGUGGAAAAGGAUACUCGG......GCCUUA......G.AG...AUAGA......G....G.A....G....AU.G...G.A.G..C.U..UG...CUAAAA..U....C....A..A.....A.....A.AGGA..........................................................UUUG..CGGGA..UGA..A..UUUC.G.U...A....UU.G....U..A.GA...G..A.C.U.G.A.U.A.UU.U.A...U...C.A.A.........................................CG.C..-..-.-..-.-.-
   NC_007614.1       UCGAUGUACAGGUCUUCACCCGGGAAG........................................................GCAUUGAACGGGACAAGCGG......GCGCAG......C.AA...AUCAU......U....G.A....-....-C.G...-.A.U..G.AgcUG..aAGCGGU..A....U....A..A.....G.....A.AAGA..........................................................UCUG..GCCGA..UCA..G..AUGC.G.G...A....UC.G....U..G.GA...G..G.C.U.G.A.C.G.CA.U.U...U...G.U.C.........................................CG.G..A..U.C.gA.G.C
   NC_007645.1       UUGAUGUUCAAGUGUUUACCCGCGAUG........................................................GCGUUGAGAAAGAUCAGCGC......GCGAAG......G.AA...AUCGA......A....C.A....A....AC.U...G.A.A..C.-..UG...AAUAAG..U....U....C..C.....G....cA.AGGA..........................................................CCUA..AACGA..UGA..G..UAUA.A.A...A....UC.G....U..U.GA...A..G.G.C.G.C.A.A.CG.U.U...C...G.A.G.........................................CGcU..U..G.C..G.G.U
   NC_007712.1       UCGAUGUUCAGGUAUUUACCCGCGACG........................................................GCGUGGAGAAAGACAAGCGC......GCGCUG......G.AA...AUCGA......G....G.A....A....AU.G...C.A.G..C.U..UA...AGCAGG..C....C....A..A.....A.....A.AGGA..........................................................CCUG..ACCGA..AGA..A..UUGC.A.G...A....UC.U....U..U.GA...A..G.C.C.G.G.U.C.UG.U.U...U...G.C.C.........................................CG.U..A..U.U..C.G.C
   NC_007912.1       UAGAUGUGCAGGUAUUUACGCGCGAUG........................................................GUUUAGAAAAAGACCAGCGU......UCACGU......G.AU...AUCGA......A....A.A....A....GC.A...C.A.G..C.U..AG...AUCAAA..U....U....C..G.....U.....A.AGGA..........................................................CUUA..AACGA..AGA..G..UACC.G.U...A....UUgU....U..C.AA...G..G.C.G.C.U.A.C.UU.U.U...G...A.G.C.........................................-G.U..U..U.A..C.G.C
   NC_007954.1       UCGACGUUCAAGUCUUCACUCGUGAUG........................................................GCGUUGAGAAAGAUAAGCGU......GCCCUA......G.AA...AUCGA......A....G.A....A....AU.G...C.A.C..G.U..UG...CUCAGG..C....C....C..G.....U.....A.AGGA..........................................................CCUA..GGUGA..AGA..G..UUUA.A.G...A....UC.C....U..U.GA...A..G.A.A.G.G.C.G.UA.U.U...A...A.G.C.........................................CG.U..G..C.A..C.G.U
   NC_007963.1       UCGACGUGCAGGUCUUCACCCGUGACG........................................................GGGUCGAGAAGGAUUCGCGU......GCGCUU......U.CC...AUCGA......G....C.A....A....AG.C...C.A.G..C.U..CG...ACGAAG..U....G....C..-.....-.....-.----gcaaggaccuuc................................aggaaaccuaucg.CAUC..GCCGA..AGA..-..--GG.C.G...A....CU.U....U..C.GA...-..-.-.-.-.-.-.-.--.-.-...-...-.-.-gcgu..............................cucaa..--.-..-..-.-..-.-.-
   NC_008027.1       UCGACGUACAGGUCUUCACCCGUGAUG........................................................GCGUUGAGCGCGACAGCCGC......GCCCUG......G.CC...AUCGA......G....A.A....G....AU.G...C.A.A..C.U..GG...ACGAGA..U....C....C..G.....C.....A.AGGA..........................................................CCUC..AACGA..AGA..G..UUCC.G.C...A....UC.G....U..C.GA...A.gG.C.G.C.A.A.C.CU.U.C...G...A.G.C.........................................-G.U..C..U.G..C.G.U
   NC_008260.1       UCGAUGUGCAGGUCUUUACCCGCGACG........................................................GUGUUGAGAAAGAUGAGCGU......GCCCGU......C.AA...AUUGA......G....C.A....G....GC.-...-.-.-..-.-..--...------..-....-....-..-.....-.....-.----ugcccuugagcaguuccgca................aagauuugaaagacgaguacc.----..-----..---..-..----.G.C...A....UU.C....U..C.GA...G..C.U.G.G.A.U.A.U-.-.U...C...U.G.G.........................................AA.C..G..U.C..U.G.C
   NC_008345.1       UCGACGUACAGGUAUUUACCCGUGACG........................................................GCGUUGAGAAAGACAAGCGU......GCGCUU......G.AA...AUUGA......A....G.A....C....AU.G...C.A.C.gU.U..CG...-UCAAG..C....U....C..G.....U.....A.AAGA..........................................................CUUA..GGCGA..AGA..-..GUUC.AaG...A....UC.C....U..U.GA...A..G.A.A.G.G.C.G.UA.U.U...G...G.G.C.........................................CG.U..G..C.A..C.G.U
   NC_008700.1       UCGACGUUCAGGUAUUUACCCGUGACG........................................................GCGUUGAGAAAGACAAGCGU......GCCAUC......G.AA...AUCGA......A....G.A....G....AU.G...C.A.C..A.U..CG...CUCAGG..C....C....C..G.....U.....A.AGGA..........................................................CCUG..UCCGA..AG-..A..GUUC.AaG...A....UC.C....U..C.GA...A..G.A.G.G.G.C.G.UU.C.U...G...A.G.C.........................................CG.U..G..C.C..C.G.U
   NC_008709.1       UUGACGUACAAGUCUUUACUCGAGAUG........................................................GUGUUGAAAAAGAUAAACGU......GCGCUU......G.AA...AUAGA......A....G.A....A....AU.G...C.A.G..C.U..UA...AAGCGG..C....G....A..A.....G.....A.AAGA..........................................................UUUA..ACUGA..AAA..G..UUCA.A.A...A....UC.U....U..A.GA...A..A.A.C.G.C.A.A.UU.U.A...-...U.G.A.........................................AA.A..A..G.C..C.U.U
   NC_009092.1       UCGACGUUCAGGUAUUUACCCGUGACG........................................................GCGUUGAAAAAGACAAGCGU......GCUGUA......G.AA...AUCGA......A....G.A....G....AU.G...C.A.C..A.U..CG...CUCAGG..C....U....A..A.....G.....A.AAGA..........................................................CCUG..ACCGA..AG-..A..GUUC.AaG...A....UC.C....U..U.GA...A..G.A.A.G.G.U.G.UC.U.U...C...G.G.-.........................................--.-..-..-.-..-.-.-
   NC_009792.1       UCGACGUUCAGGUCUUUACUCGCGAUG........................................................GCGUAGAAAAAGACAAACGU......GCGCUG......G.AA...AUCGA......A....G.A....G....AU.G...C.A.G..C.U..GA...AGCAGG..C....G....A..A.....G.....A.AAGA..........................................................CCUG..UCUGA..AGA..A..UUGC.A.G...A....UC.C....U..C.GA...A..G.C.U.G.G.C.C.UG.U.U...U...A.G.C.........................................CG.U..A..U.C..C.A.C
   NC_009831.1       UCGACGUCCAGGUAUUUACCCGUGACG........................................................GCGUUGAGAAAGAUAAGCGU......GCUGUU......G.AA...AUUGA......A....G.A....G....AU.G...C.A.U..G.U..CG...GUCAGG..C....U....A..A.....G.....A.AAGA..........................................................UUUG..AGCGA..AGA..G..UUCC.A.G...A....UC.C....U..C.GA...A..G.A.G.G.G.U.G.UU.U.A...U...G.G.A.........................................CG.U..G..C.C..C.G.U
   NC_009901.1       UCGACGUACAAGUAUUUACUCGUGACG........................................................GCGUUGAGAAAGACAAGCGU......GCUGUA......G.AA...AUUGA......A....G.A....G....AU.G...C.A.U..A.U..CG...CCCAGG..C....G....A..A.....G.....A.AGGA..........................................................UUUG..ACUGA..AGA..G..UUCC.A.A...A....UU.C....U..U.GA...A..G.A.U.G.G.U.G.UU.A.U...C...G.G.U.........................................CG.U..G..C.-..-.U.C
   NC_009943.1       UCGAUGCCAAGGUCUUCACCCGUCGGG........................................................GCGUGGAAAAGGACACCC--......GCACCC......G.CAu.gAUCGA......G....G.Aa..gA....AG.A...G.A.U.cC.G..UG...UGCUGG..A....G....A..A.....G.....A.A---..........................................................CCGG..GACGA..CGA..G..AUUG.C.G...G....UC.A....U..C.GA...A..G.A.G.G.-.-.-.--.-.-...-...-.-.-ugacccggga..................acggcucaagg..--.-..-..-.C..C.C.U
   NC_010334.1       UCGACGUACAAGUAUUUACUCGUGACG........................................................GCGUUGAGAAAGAUAAGCGU......GCUGUA......G.AA...AUCGA......A....G.A....G....AU.G...C.A.U..A.U..UG...CUCAGG..C....U....A..A.....G.....A.AGGA..........................................................CUUG..ACUGA..AGA..G..UUCA.A.G...A....UU.C....U..U.GA...A..G.A.U.G.G.U.G.UU.C.U...U...G.G.U.........................................CG.U..G..C.-..-.U.C
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   NC_021291.1       UCGACGUGCAGGUCUUCACCCGCGAUG........................................................GCGUGGAAAAAGACGAGCGC......GCGCUC......U.CC...AUCGA......G....G.G....-....-C.G...A.U.GccC.U..CG...CCGAUG..U....G....C..G.....C.....A.AGGA..........................................................CCUG..GACGA..UCA..G..UACC.G.G...A....UC.U....U..C.GA...G..G.A.C.G.A.U.G.CC.U.U...C...G.C.-.........................................--.-..-..-.-..-.-.-
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   NC_021870.1       UCGACGUUCAGGUCUUUACCCGCGAUG........................................................GCGUAGAAAAAGACAAGCGU......GCGCUG......G.AA...AUCGA......A....G.A....A....AU.G...C.A.G..C.U..CA...AGCAGG..C....G....A..A.....G.....A.AAGA..........................................................CCUG..UCUGA..AGA..G..UUGC.A.G...A....UC.C....U..U.GA...G..G.C.G.G.G.C.C.UG.U.U...U...A.G.C.........................................CG.U..A..U.U..C.G.U
   NZ_AP012547.1     UCGACGUCCAGGUCUUCACCCGCGAAG........................................................GCAUCGAGCGCGACAAGCGA......GCCCAGu....cG.AU..cAUCGA......C....G.A....C....AU.G...C.-.-..-.-..--...------..-....-....-..-.....-.....-.----ugaaagguuacaagcag.......................gaucuggccgaccagau.----..-----..---..-..--GC.G.U...A....UC.G....U..C.GA...G..C.G.C.G.A.U.A.CC.U.U...C...U.C.G.........................................CG.G..A..U.C..G.A.G
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   NZ_AP014635.1     UCGACGUACAAGUCUUCACUCGCGAUG........................................................GCGUAGAGAAAGACAAACGU......GCGCUU......G.AA...AUCGA......A....C.A....G....AU.G...C.A.G..U.U..GA...AAGAAG..C....G....A..A.....G.....A.AAGA..........................................................CUUA..ACCGA..AGA..A..UUCC.A.A...A....UC.U....U..G.GA...A..G.G.C.G.G.U.U.UG.C.U...U...G.C.U.........................................CG.U..G..U.U..C.G.U
   NZ_AP014836.1     UAGAUGUUCAGGUUUUUACCCGGGAUG........................................................GUAUAGAGAAAGGAUUGCGA......GCUUUA......C.AG...AUAGA......G....G.A....G....AU.G...G.A.G..U.UagCU...A--AGA..U....U....A..A.....A.....A.AAGA..........................................................CCUA..UGGGA..UGA..G..UUUC.G.C...A....UU.G....U..A.GA...G..G.C.U.G.A.U.A.--.-.-...-...-.-.-u.....................................u..--.U..A..U.C..A.G.C
   NZ_AP014862.1     UCGACGUUCAGGUCUUCACUCGUGAUG........................................................GCGUUGAGCGCGACAGCCGC......GCCCUG......U.CC...AUCGA......G....A.A....G....AU.G...C.A.G..C.U..GG...ACGAGA..U....C....C..G.....C.....A.AGGA..........................................................CCUG..AACGA..AGA..G..UUCC.G.U...A....UC.G....U..C.GA...A..G.G.C.G.C.G.A.CG.U.U...C...G.A.G.........................................CG.U.cU..G.C..G.C.U
   NZ_AP014879.1     UCGACGUGCAGGUGUUCACGCGCGAGG........................................................GCGUGGAGAAGGACGCGCGC......GCCAAG......A.GC...AUCGA......G....G.A....G....UC.-...-.-.-..-.-..GG...AACUGG..C....-....-..-.....-.....-.----cagcauccgcaa.................................ggaucucgacga.CCAG..UACC-..---..-..----.G.C...A....UC.C....U..G.GA...A..A.A.C.G.A.C.G.CG.U.U...C...G.C.G.........................................CG.C..C..U.C..G.-.A
   NZ_AP014936.1     UCGACGUGCAGGUGUUCACGCGCGAAG........................................................GCGUCGAGAAGGACGCGCGC......GCGAAG......A.GC...AUCGA......G....G.A....G....AU.G...G.A.A..C.U..CG...-CGAGC..A....U....C..C.....G.....-.----caa...................................................gga.CCUC..GACGA..CCA..G..UACC.G.C...A....UC.G....U..C.GA...G..G.A.C.G.A.-.C.GC.C.U...A...C.G.C.........................................GC.G.cC..U.C..G.A.-
   NZ_AP014940.1     UCGACGUGCAGGUCUUCACCCGCGACG........................................................GCAUCGAGAAGGACAAGCGC......GCCCGC......C.AG...AUCGA......A....G.A....G....UC.G...G.A.A..A.U..CC...GCCGGG..U....C....A..A.....G.....A.AGGA..........................................................CUUC..GACGA..CCA..G..UUCC.G.G...A....UC.C....U..C.GA...A..G.C.G.G.C.G.A.UC.U.A...C...G.A.C.........................................CG.U..-..-.C..U.G.C
   NZ_AP017423.2     UCGACGUACAGGUCUUCACCCGCGACG........................................................GCGUUGAGCGUGACGCUCGU......GCCCUG......U.CG...AUCGA......G....A.A....G....UC.C...C.A.G..C.U..GG...ACGAGA..U....C....C..G.....C.....A.AGGA..........................................................CCUG..AACGA..AGA..G..UUCC.G.C...A....UC.G....U..U.GA...A..G.G.C.G.C.U.A.CU.U.U...C...G.A.A.........................................CG.U.cU..G.C..G.C.U
   NZ_AP017928.1     UAGACGUCCAGGUCUUUACCCGUGACG........................................................GCGUCAAGAAGGAUGAUCGG......GCGAAG......C.AG...AUCGA......G....C.A....G....GC.U...G.A.A..A.U..CG...AUCGGG..U....C....A..A.....G.....A.AAGA..........................................................UCUG..AACGA..CCA..G..CUUC.G.A...A....UU.A....U..C.GA...A..A.A.A.G.A.C.U.UU.U.A...C...C.A.G.........................................CG.U..G..U.-..-.-.-
   NZ_AP018005.1     UCGACGUGCAAGUCUUUACACGUGAUG........................................................GUCUGGAAAAAGAUCAACGU......GCUUUA......A.GU...AUCGA......A....G.C....U....GC.G...G.C.U..U.U..AG...AAAAAA..U....U....A..A.....G.....A.AAGA..........................................................UUUA..UACGA..CGA..A..UUUA.G.A...A....UU.U....U..A.GA...A..A.A.U.G.A.U.A.GU.U.-...-...-.-.-.........................................AC.C..A..A.C..G.U.U
   NZ_AP018560.1     UCGACGUGCAGGUGUUCACCCGCGACG........................................................GCAUCGAGAAGGACAAGCGC......GCCAAG......C.AG...AUCGA......G....G.A....A....AU.G...G.A.G..A.U..CA...AGCGGA..U....-....-..-.....-.....-.----ccgcaagg.........................................auuucgac.----..---GA..CCA..G..UUCC.G.C...A....UC.C....U..C.GA...A..G.G.G.G.C.G.A.UC.U.A...C...A.A.C.........................................CG.U..C..U.G..C.G.C
   NZ_AP018685.1     UUGAUGUUCAAGUCUUUACUCGCGAUG........................................................GCGUAGAAAAAGACAAGCGU......GCGCUU......G.AA...AUUGA......A....C.A....A....AU.G...C.A.G..U.U..GA...AAGACG..C....G....A..A.....G.....A.AAGA..........................................................CUUA..ACUGA..AGA..G..UUCC.A.A...A....UU.C....U..C.GA...A..G.G.U.G.G.U.C.UA.U.U...A...G.C.A.........................................CG.U..G..U.U..C.G.U
   NZ_AP018689.1     UUGAUGUUCAAGUCUUUACUCGCGAUG........................................................GCGUAGAAAAAGACAAGCGU......GCGCUU......G.AA...AUUGA......A....C.A....A....AU.G...C.A.G..U.U..GA...AAGACG..C....G....A..A.....G.....A.AAGA..........................................................CUUA..ACUGA..AGA..G..UUCC.A.A...A....UU.C....U..U.GA...A..G.G.U.G.G.U.C.UA.U.U...A...G.C.A.........................................CG.U..G..U.U..C.G.U
   NZ_AP018724.1     UCGAUGUCCAGGUCUUUACCCGCGACG........................................................GUUUGGAGAAGGACAGCCGU......GCCAAG......G.CC...AUCGA......G....G.Aa..gA....AG.G...C.C.U..G.G..CC...--CAGG..U....G....C..G.....C.....A.AGGA..........................................................CUUG..AUGGA..UCA..-..GCGC.C.G...C...aUC.A....U..G.GA...A..G.A.C.G.A.U.A.UC.U.U...C...C.A.-.........................................--.-..-..-.-..-.-.-
   NZ_AP018725.1     UCGACGUGCAGGUCUUCACCCGCGACG........................................................GUGUCGAGAAAGAUGCCCGU......GCCCUG......G.AA...AUCGA......G....GcA....A....GC.Ga.aC.U.G..G.C..C-...A--AGG..U....C....A..A.....G.....A.AGGA..........................................................CCUA..AACGA..UCA..G..CUGC.G.U...A....UC.C....U..U.GA...A..G.A.A.G.A.C.C.UU.U.A...C...-.-.-.........................................--.-..-..-.-..-.-.-
   NZ_AP018933.1     UUGACGUUCAGGUCUUCACUCGCGAUG........................................................GCGUAGAGAAAGAUCCGCGU......GCACUG......U.CC...AUCGA......G....C.A....G....AC.A...C.A.G..-.-..CU...GGCUGA..A....G....UccG.....C.....A.AAGA..........................................................UCUG..CAGGA..AAC..G..UUCC.G.C...A....UU.G....C..U.GA...A..A.A.A.G.C.A.A.CG.U.U...U...G.A.A.........................................CG.U.cU..G.C..A.U.C
   NZ_AP019007.1     UCGACGUUCAGGUCUUCACCCGUGACG........................................................GCGUUGAGAAAGAUAAACGU......GCGCUG......G.AA...AUCGA......A....G.A....G....AU.G...C.A.G..C.U..CA...AACAGG..C....G....A..A.....G.....A.AAGA..........................................................CCUG..UCUGA..AGA..A..CUGC.A.G...A....UC.C....U..C.GA...A..G.C.G.G.G.U.C.UG.U.U...C...A.G.C.........................................CG.U..A..U.C..U.A.U
   NZ_AP019630.1     UCGACGUUCAGGUCUUCACCCGUGACG........................................................GCGUUGAGAAAGAUAAGCGU......GCGCUG......G.AA...AUCGA......A....G.A....G....AU.G...C.A.G..C.U..CA...AACAGG..C....U....A..A.....G.....A.AAGA..........................................................CCUG..UCUGA..AGA..A..CUGC.A.G...A....UC.C....U..C.GA...A..G.C.G.G.G.U.C.UG.U.U...C...A.G.C.........................................CG.U..A..U.C..U.A.U
   NZ_AP019651.1     UCGACGUUCAAGUAUUUACUCGUGACG........................................................GUGUUGAAAAAGACAAACGU......GCACUU......G.AA...AUUGA......A....C.A....A....AU.G...C.A.G..C.U..GA...AAGAAG..C....G....A..A.....G.....A.AAGA..........................................................CCUA..ACUGA..AGA..A..UUCC.A.G...A....UU.C....U..U.GA...G..G.G.U.G.G.C.C.UU.C.U...A...A.A.C.........................................CG.U..G..U.U..C.G.C
   NZ_AP019654.1     UCGACGUUCAAGUAUUUACUCGUGACG........................................................GUGUUGAAAAAGACAAACGU......GCACUU......G.AA...AUUGA......A....C.A....G....AU.G...C.A.G..C.U..GA...AAGAAG..C....G....A..A.....G.....A.AAGA..........................................................CCUA..ACUGA..AGA..A..UUCC.A.G...A....UU.C....U..U.GA...G.gG.C.G.-.G.C.C.UU.C.U...U...A.A.C.........................................CG.U..G..U.U..C.G.C
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   NZ_AP019782.1     UCGACGUGCAGGUGUUCACCCGCGAUG........................................................GCGUCAAGAAAGACGAGCGC......GCCAAG......G.CC...AUUGA......A....G.A....C....GC.G...G.A.A..A.U..CG...CUCGCG..U....A....C..G.....C.....A.AGGA..........................................................CUUG..AACGA..CCA..G..UUGC.G.C...A....UC.C....U..G.GA...A..A.A.G.G.A.U.A.UU.U.U...C...-.-.-cagcgc...........................guggaa..AA.U..A..U.G..C.U.G
   NZ_AP019783.1     UCGACGUCCAGGUCUUUACCCGCGACG........................................................GCGUCAAGAAGGACGAACGC......GCCAAG......C.AG...AUCGA......G....C.A....G....GC.C...G.A.G..A.U..CG...AGAAGG..U....C....A..A.....G.....A.AAGA..........................................................CCUG..AACGA..CCA..G..CUGC.G.C...A....UC.A....U..C.GA...G..A.A.G.G.A.C.U.UC.U.A...C...C.-.-agcg...............................cguc..GA.-..-..-.-..-.-.-
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   NZ_LS483250.1     UUGACGUGCAAGUAUUUACCCGUGAUG........................................................GCGUAGAUAAAGAUAAACGU......GCACAA......G.AC...AUCGA......G....C.A....A....AU.G...C.A.A..U.U..AC...GUGAAG..C....G....A..A.....A.....A.AAGA..........................................................CUUA..ACUGA..AGA..A..UUAU.C.U...A....UC.U....U..C.GA...A..G.A.A.G.G.C.U.UA.U.U...C...G.G.U.........................................CG.C..G..U.U..A.A.-
   NZ_LS483377.1     UCGACGUGCAGGUCUUCACCCGCGACG........................................................GCAUCGAGAAGGACAAGCGC......GCCCGC......C.AG...AUCGA......A....G.A....G....UC.U...G.A.A..A.U..CA...AGCGCG..U....C....A..A.....G.....A.AGGA..........................................................CUUC..GACGA..CCA..G..UUCC.G.C...A....UC.C....U..G.GA...A..G.C.C.G.C.C.A.--.U.C...U...A.C.A.........................................UG.C..G..U.C..U.G.C
   NZ_LS483422.1     UUGAUGUACAGGUCUUCACCCGUGAUG........................................................GCGUAGAAAAAGAUAAACGU......GCGCUA......G.AA...AUCGA......A....G.A....A....AC.U...C.A.G..U.U..AC...GUGAUG..C....G....A..A.....G.....A.AAGA..........................................................CUUA..ACAGA..AGA..G..CUAC.G.U...A....UU.U....U..C.GA...A..G.C.U.G.G.C.C.UG.U.U...U...G.C.A.........................................CG.U..A..U.U..C.G.U
   NZ_LS483429.1     UUGAUGUUCAAGUCUUCACUCGUGACG........................................................GCGUAGAAAAAGAUAAACGU......GCAUUA......G.AA...AUCGA......A....G.A....A....AU.G...C.A.A..C.U..UC...GUGAAG..C....G....A..A.....A.....A.AAGA..........................................................UUUA..ACUGA..AGA..G..UUAG.A.G...A....UU.U....U..A.GA...A..G.C.U.G.G.U.U.UA.U.U...-...-.-.-.........................................UG.C..U..C.G..U.G.U
   NZ_LS483443.1     UUGACGUACAAGUGUUUACCCGUGAUG........................................................GCGUAGAAAAAGACAAACGU......GCGUUA......G.AA...AUCGA......A....G.A....A....AU.G...C.A.A..U.U..AA...AACAAG..C....G....A..A.....A.....A.AAGA..........................................................CUUG..AGCGA..AGA..G..UUUG.A.G...A....UC.U....U..A.GA...A..G.C.C.G.G.C.U.UG.U.U...U...A.U.G.........................................CG.U..G..U.C..C.G.C
   NZ_LS483458.1     UUGAUGUUCAAGUCUUCACUCGUGAUG........................................................GCGUAGAAAAAGAUAAACGU......GCAUUA......G.AA...AUCGA......A....G.A....A....AU.G...C.A.A..C.U..UC...GUGAAG..C....G....A..A.....A.....A.AAGA..........................................................UUUA..ACUGA..AGA..G..UUAG.A.G...A....UU.U....U..A.GA...A..G.C.U.G.G.C.U.UA.U.U...U...G.C.U.........................................CG.U..G..U.U..C.G.U
   NZ_LS483470.1     UUGACGUUCAGGUAUUUACCCGCGACG........................................................GCGUAGAAAAAGACAAGCGU......GCUCUU......G.AA...AUCGA......A....G.A....C....AU.G...C.A.G..C.U..GA...AGCAGG..U....C....A..G.....A.....A.AAGA..........................................................CCUG..ACCGA..AGA..G..CUGA.A.G...A....UC.C....U..C.GA...A..G.C.U.G.G.C.C.UG.U.U...U...G.C.C.........................................CG.U..A..U.C..C.A.C
   NZ_LS999205.1     UCGACGUACAGGUCUUCACUCGCGACG........................................................GCGUUGAGCGUGAUGCUCGU......GCACUG......U.CG...AUCGA......-....G.A....A....GA.G..cC.A.G..C.U..GG...ACGAGA..U....C....C..G.....C.....A.AGGA..........................................................CCUG..AACGA..AGA..G..UUCC.G.U...A....UC.G....U..U.GA...A..G.G.U.G.C.G.A.CC.U.U...C..gA.A.C.........................................GU.C..U..G.C..G.C.U
   NZ_LT594522.1     UUGAUGUUCAAAUUUUUACUCGAGAUG........................................................GCGUUAAAAAAGAUAAGCGU......GCGUUA......G.AA...AUAGA......A....G.A....A....AU.A...C.A.A..C.U..UC...AACAGA..U....U....A..A.....A.....A.AAGA..........................................................CCUU..ACUGA..AGA..A..UUAC.A.U...A....UU.U....U..U.GA...A.aA.U.G.G.A.U.U.AU.U.U...U...C.A.C.........................................-G.U..A..U.U..C.G.U
   NZ_LT615367.1     UCGACGUGCAGGUCUUUACCCGCGAUG........................................................GUGUGGAAAAAGACAAGCGC......GCGCUG......G.AA...AUCGA......A....G.A....A....AU.G...C.A.G..C.U..CA...AGCAGG..C....C....A..A.....G.....A.AAGA..........................................................CCUG..ACCGA..AGA..G..UUGC.A.G...A....UU.C....U..G.GA...A..G.C.C.G.G.U.C.UG.U.U...U...G.C.C.........................................CG.U..A..U.U..C.A.C
   NZ_LT853882.1     UCGACGUGCAGGUCUUCACCCGCGACG........................................................GCAUCGAGAAAGACAAGCGU......GCGCGU......C.AG...AUUGA......A....G.A....A....UC.C...G.A.A..A.U..CA...AGCGCG..U....C....A..A.....G.....A.AGGA..........................................................CUUC..GACGA..CCA..G..UUCC.G.C...A....UC.C....U..U.GA...A..G.C.A.G.C.C.A.U-.C.U...A...C.G.C.........................................-A.C..G..U.C..U.G.C
   NZ_LT855380.1     UCGACGUUCAGGUCUUCACCCGUGAUG........................................................GUGUCGAGCGUGAUGCACGU......GCACUG......U.CC...AUCGA......G....A.A....G....UC.G...C.A.A..C.U..CG...ACGAGA..U....C....C..G.....C.....A.AGGA..........................................................UCUG..AACGA..AGA..G..UUCC.G.C...A....UC.G....U..U.GA...A..G.G.C.G.C.UaC.AU.U.C...G...A.G.C.........................................GU.C..U..G.C..G.C.U
   NZ_LT897836.1     UUGAUGUCCAAGUAUUUACCCGCGAUG........................................................GCGUAGAAAAAGAUAAGCGU......GCGUUG......G.AA...AUCGA......A....G.A....A....AU.G...C.A.A..C.U..UC...AGCAGG..U....C....A..A.....A.....A.AGGA..........................................................UUUG..ACCGA..AGA..A..CUGC.A.A...A....UC.U....U..U.GA...A..G.C.U.G.G.C.U.UA.U.U...U...U.C.U.........................................CG.U..A..U.C..C.G.U
   NZ_LT906448.1     UCGACGUGCAAGUCUUUACCCGUGAUG........................................................GUGUAGAAAAAGACAAACGU......GCGCUU......G.AA...AUUGA......A....G.A....A....AU.G...C.A.A..U.U..AA...AACAAG..C....G....A..A.....A.....A.AAGA..........................................................CCUG..GUGGA..AGA..A..UUAG.A.A...A....UC.C....U..U.GA...G..G.C.A.G.G.U.U.UA.U.U...U...A.C.G.........................................CG.U..G..U.U..C.G.U
   NZ_LT906451.1     UCGAUGUGCAAAUCUUUACUCGUGAUG........................................................GCCUUGAGAAGGAUGAGCGU......GCAAAA......A.GU...AUUGAg....gA....A.G....A....AC.A...U.C.U..C.G..C-...-UCGUG..U....U....C..G.....C.....A.AGGA..........................................................CUUA..AUCGA..CGA..A..CGAC.G.C...A....UU.C....G..C.GA...A..G.A.A.G.A.U.A.UU.U.A...C...C.A.U.........................................CG.U..G..U.C..A.G.U
   NZ_LT906463.1     UUGACGUUCAAGUCUUCACCCGUGAUG........................................................GCGUAGAAAAAGACAAACGU......GCAUUA......G.AA...AUUGA......A....G.A....A....AU.G...C.A.G..U.U..AA...AACAAG..C....U....A..A.....G.....A.AAGA..........................................................CCUU..UCUGA..UGA..A..UUAG.A.A...A....UC.U....U..A.GA...A..G.C.U.G.G.C.U.UG.U.U...U...G.C.U.........................................CG.U..G..U.G..C.G.U
   NZ_LT906479.1     UCGACGUGCAGGUCUUCACCCGCGAUG........................................................GCGUGGAAAAAGACAAGCGU......GCGUUG......G.AA...AUCGA......A....G.A....G....AU.G...C.A.G..C.U..GA...AGCAGG..C....G....A..A.....G.....A.AAGA..........................................................CCUG..ACUGA..AGA..A..CUGC.A.G...A....UC.C....U..G.GA...A..G.C.C.G.G.U.C.UG.U.U...U...G.C.G.........................................CG.U..A..U.C..C.A.C
   NZ_OU015430.1     UCGACGUGCAGGUCUUCACCCGCGACG........................................................GAAUCGAGAAGGACAAGCGC......GCCAAG......C.AG...AUCGA......G....G.A....G....UC.C...G.A.G..G.U..CC...GCCGCG..U....C....A..A.....G.....A.AGGA..........................................................CUUC..GACGA..CCA..G..UUCC.G.C...A....UC.C....U..C.GA...G..G.C.G.G.C.G.A.UC.U.A...C...-.-.-.........................................GA.C..C..G.C..CuG.C
   NZ_OU594967.1     UCGACAUUCAGGUCUUCACUCGUGAUG........................................................GCGUUGAAAAAGAUAAACGU......GCUAUU......G.AU...AUCCA......A....G.A....U....GC.C...C.A.G..C.U..GC...GCGAAG..C....G....A..A.....G.....A.AAGA..........................................................UUUG..ACAGA..AGA..G..UUUA.A.A...A....UC.U....U..U.GA...A..G.A.A.G.G.G.-.--.-.-...-...-.-.-auuuuagc......................ucgagcuaa..--.-..G..U.C..A.U.U
   NZ_OU907312.1     UCGAUGUACAAAUUUUCACCCGUGAUG........................................................GUAUUGAAAAAGAUAAACGU......GCCUUG......G.AA...AUUGA......G....G.G....C....AU.G...C.A.G..C.U..AC...GUGAAG..U....G....A..A.....A.....A.AGGA..........................................................UCUG..ACUGA..GGC..G..CUCA.A.U...A....UU.U....U..A.GA...A..G.C.U.G.G.A.C.UA.U.U...U...U.C.A.........................................CG.A..A..U.G..C.G.U


   Structure         ((..(((....((((.....(((............................................................))).......))))............))).........).).....((((...........(.(..........(.(...(.(.(..(.(..((....(((((...........................................................................................))))..).))...))......)))).)..........))......)..).))......(.(.(.(.(.(...((.........................................................))....)..).)..).).)


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thrU-tyrU-glyT-thrT-tufB-secE-rplK-rplA-rplJ-rplL-rpoB-rpoC-nusG



Position: 8662-8771, Conformation: #0







97% 90% 75% 50% Nucleotide present N N N Nucleotide identify E < 0.1 Base-pair covariation E < 0.05 Helix-level covariation 97% 90% 75%

U Y G A Y G U C A R G U U U Y A C Y C G Y G A Y G G Y G U G A R A A R G A Y R R R C G Y G C A U Y G A R R A R R Y A R Y Y R A A G A Y U G A R A R Y Y R A U Y U Y G A R R G Y Y 5'