thrU-tyrU-glyT-thrT-tufB-secE-rplK-rplA-rplJ-rplL-rpoB-rpoC-nusG



Position: 4436-4520, Conformation: #0







DMS reactivity > 1.0 0.0 0.4 0.7 G/U/No data
Position: 0 (position.label in template: 0.5')5' Position: 1 (position.label in template: 1.G) Reactivity: nanG Position: 2 (position.label in template: 2.C) Reactivity: nanC Position: 3 (position.label in template: 3.C) Reactivity: nanC Position: 4 (position.label in template: 4.U) Reactivity: nanU Position: 5 (position.label in template: 5.A) Reactivity: nanA Position: 6 (position.label in template: 6.U) Reactivity: nanU Position: 7 (position.label in template: 7.C) Reactivity: nanC Position: 8 (position.label in template: 8.C) Reactivity: nanC Position: 9 (position.label in template: 9.A) Reactivity: nanA Position: 10 (position.label in template: 10.G) Reactivity: nanG Position: 11 (position.label in template: 11.G) Reactivity: nanG Position: 12 (position.label in template: 12.C) Reactivity: nanC Position: 13 (position.label in template: 13.C) Reactivity: nanC Position: 14 (position.label in template: 14.U) Reactivity: nanU Position: 15 (position.label in template: 15.C) Reactivity: nanC Position: 16 (position.label in template: 16.C) Reactivity: nanC Position: 17 (position.label in template: 17.G) Reactivity: nanG Position: 18 (position.label in template: 18.U) Reactivity: nanU Position: 19 (position.label in template: 19.C) Reactivity: nanC Position: 20 (position.label in template: 20.G) Reactivity: nanG Position: 21 (position.label in template: 21.A) Reactivity: nanA Position: 22 (position.label in template: 22.A) Reactivity: nanA Position: 23 (position.label in template: 23.G) Reactivity: nanG Position: 24 (position.label in template: 24.A) Reactivity: nanA Position: 25 (position.label in template: 25.C) Reactivity: nanC Position: 26 (position.label in template: 26.C) Reactivity: nanC Position: 27 (position.label in template: 27.G) Reactivity: nanG Position: 28 (position.label in template: 28.C) Reactivity: nanC Position: 29 (position.label in template: 29.A) Reactivity: nanA Position: 30 (position.label in template: 30.G) Reactivity: nanG Position: 31 (position.label in template: 31.G) Reactivity: nanG Position: 32 (position.label in template: 32.A) Reactivity: 1A Position: 33 (position.label in template: 33.G) Reactivity: nanG Position: 34 (position.label in template: 34.U) Reactivity: nanU Position: 35 (position.label in template: 35.U) Reactivity: nanU Position: 36 (position.label in template: 36.U) Reactivity: nanU Position: 37 (position.label in template: 37.C) Reactivity: 0C Position: 38 (position.label in template: 38.G) Reactivity: nanG Position: 39 (position.label in template: 39.C) Reactivity: 0.5C Position: 40 (position.label in template: 40.A) Reactivity: 1A Position: 41 (position.label in template: 41.A) Reactivity: 0A Position: 42 (position.label in template: 42.G) Reactivity: nanG Position: 43 (position.label in template: 43.A) Reactivity: 0A Position: 44 (position.label in template: 44.A) Reactivity: 0A Position: 45 (position.label in template: 45.A) Reactivity: 0A Position: 46 (position.label in template: 46.C) Reactivity: 0C Position: 47 (position.label in template: 47.U) Reactivity: nanU Position: 48 (position.label in template: 48.U) Reactivity: nanU Position: 49 (position.label in template: 49.A) Reactivity: 0A Position: 50 (position.label in template: 50.A) Reactivity: 0A Position: 51 (position.label in template: 51.U) Reactivity: nanU Position: 52 (position.label in template: 52.C) Reactivity: 1C Position: 53 (position.label in template: 53.C) Reactivity: 0C Position: 54 (position.label in template: 54.C) Reactivity: 0C Position: 55 (position.label in template: 55.C) Reactivity: 0C Position: 56 (position.label in template: 56.U) Reactivity: nanU Position: 57 (position.label in template: 57.G) Reactivity: nanG Position: 58 (position.label in template: 58.C) Reactivity: 0C Position: 59 (position.label in template: 59.G) Reactivity: nanG Position: 60 (position.label in template: 60.U) Reactivity: nanU Position: 61 (position.label in template: 61.A) Reactivity: 0A Position: 62 (position.label in template: 62.G) Reactivity: nanG Position: 63 (position.label in template: 63.A) Reactivity: 0A Position: 64 (position.label in template: 64.C) Reactivity: 0C Position: 65 (position.label in template: 65.G) Reactivity: nanG Position: 66 (position.label in template: 66.G) Reactivity: nanG Position: 67 (position.label in template: 67.U) Reactivity: nanU Position: 68 (position.label in template: 68.G) Reactivity: nanG Position: 69 (position.label in template: 69.A) Reactivity: 0A Position: 70 (position.label in template: 70.C) Reactivity: 0.5C Position: 71 (position.label in template: 71.A) Reactivity: 0A Position: 72 (position.label in template: 72.G) Reactivity: nanG Position: 73 (position.label in template: 73.A) Reactivity: 0A Position: 74 (position.label in template: 74.A) Reactivity: 0A Position: 75 (position.label in template: 75.C) Reactivity: 0C Position: 76 (position.label in template: 76.G) Reactivity: nanG Position: 77 (position.label in template: 77.C) Reactivity: 0.5C Position: 78 (position.label in template: 78.U) Reactivity: nanU Position: 79 (position.label in template: 79.A) Reactivity: 0A Position: 80 (position.label in template: 80.A) Reactivity: 0A Position: 81 (position.label in template: 81.G) Reactivity: nanG Position: 82 (position.label in template: 82.A) Reactivity: 0.5A Position: 83 (position.label in template: 83.U) Reactivity: nanU Position: 84 (position.label in template: 84.U) Reactivity: nanU Position: 85 (position.label in template: 85.A) Reactivity: 0A Position: 86 (position.label in template: 86.U) Reactivity: nanU Position: 87 (position.label in template: 87.U) Reactivity: nanU Position: 88 (position.label in template: 88.C) Reactivity: 0.5C Position: 89 (position.label in template: 89.U) Reactivity: nanU Position: 90 (position.label in template: 90.U) Reactivity: nanU Position: 91 (position.label in template: 91.U) Reactivity: nanU Position: 92 (position.label in template: 92.U) Reactivity: nanU Position: 93 (position.label in template: 93.A) Reactivity: 0A Position: 94 (position.label in template: 94.U) Reactivity: nanU Position: 95 (position.label in template: 95.A) Reactivity: 0A Position: 96 (position.label in template: 96.U) Reactivity: nanU Position: 97 (position.label in template: 97.U) Reactivity: nanU Position: 98 (position.label in template: 98.C) Reactivity: nanC Position: 99 (position.label in template: 99.U) Reactivity: nanU Position: 100 (position.label in template: 100.G) Reactivity: nanG Position: 101 (position.label in template: 101.G) Reactivity: nanG Position: 102 (position.label in template: 102.C) Reactivity: nanC Position: 103 (position.label in template: 103.U) Reactivity: nanU Position: 104 (position.label in template: 104.U) Reactivity: nanU Position: 105 (position.label in template: 105.G) Reactivity: nanG Position: 106 (position.label in template: 106.U) Reactivity: nanU Position: 107 (position.label in template: 107.U) Reactivity: nanU Position: 108 (position.label in template: 108.U) Reactivity: nanU Position: 109 (position.label in template: 109.C) Reactivity: nanC Position: 110 (position.label in template: 110.U) Reactivity: nanU Position: 111 (position.label in template: 111.G) Reactivity: nanG Position: 112 (position.label in template: 112.C) Reactivity: nanC Position: 113 (position.label in template: 113.U) Reactivity: nanU Position: 114 (position.label in template: 114.C) Reactivity: nanC Position: 115 (position.label in template: 115.A) Reactivity: nanA Position: 116 (position.label in template: 116.C) Reactivity: nanC Position: 117 (position.label in template: 117.C) Reactivity: nanC Position: 118 (position.label in template: 118.G) Reactivity: nanG Position: 119 (position.label in template: 119.U) Reactivity: nanU Position: 120 (position.label in template: 120.A) Reactivity: nanA Position: 121 (position.label in template: 121.A) Reactivity: nanA Position: 122 (position.label in template: 122.U) Reactivity: nanU Position: 123 (position.label in template: 123.U) Reactivity: nanU Position: 124 (position.label in template: 124.A) Reactivity: nanA Position: 125 (position.label in template: 125.A) Reactivity: nanA Position: 126 (position.label in template: 126.3')3' 10 20 30 50 100


thrU-tyrU-glyT-thrT-tufB-secE-rplK-rplA-rplJ-rplL-rpoB-rpoC-nusG



Position: 4436-4520, Conformation: #0







Retained alignments:


   NC_002977.6       ACCGg.aUU.UC....................CGGUGA....CCGUC.....AAAGACCGCAGGCGUG..CC.UUu.g-.................................................G.................................................GG..CACUUAAUCGua...........cagCCUGCGC.A.GACGGUGA..CUGAA..GC....CG...A.AUU.UC.GG.-.----.-..................................................cgaa................................aggagCC.G.U....UAU....GAGA...--..-.-.----...--.------
   NC_003910.7       GCUG...AA.UAaau..............acaCAACCC....CCGUC.....CAAGACCGUAGGUGUA..GU.UA...Uuucuuc.....................................ugauuuA.................................................AU..UACUUAAUUUa..............uCCUACGU.A.GAUGGUGA..UUA--..CC....C-...-.AGA.UA.UU.U.CCUA.G...........................................................................................A-.-.-....UUU....UUCU...GG..U.C.----...CU.CGCCGU
   NC_003911.12      CGCU...UU.AU....................UUUGUU....UCGUC.....CAAGACGGUGGGUGGC..UG.CAu.c-................................................cG.................................................UA..GCCUUAAUUU................CCUGCCUgA.GACGG-GU..AAAGA..CC....AA...A.G--.--.--.-.----.-agaucgggggcuc.......................gacccucgggcgau.........................................--.-.-....--U....AUUU...GG..C.U.C---...CA.CCCCGU
   NC_004603.1       AUUA..aGA.CC....................CAGUCU....CCGUC.....CAAGACCGUAGGUGUC..UG.CC...Uaa.............................................ccG.................................................UU..GACUUAAUUA...............uCCUACGU.A.GAUGGUGC..CCGAA..CU....GA...C.AGA.AA.GC.U.CUAU.-..................................................guaaa..............................uaguuaAC.U.U....UCU....UCUG...GG..A.A.----...UG.CACCUC
   NC_005126.1       GCCU..aAU.CC....................AAGCC-....CCGUC.....CAAGACCGCAGGUGUA..AG.--...U.................................................A.................................................AU..UACUUAAUAU...............uCCUGCGU.A.GACGGUGA..CAGAG..CC....AA...A.---.UG.AA.A.UUCA.U...........................................................................................UU.C.-....---....---U...GG..A.U.UCUG...CU.CACCGU
   NC_005966.1       AUAA...AU.GUag................auUUAUCA....GCGUC.....AAAGACCUCAGGCGAG..AA.AU...Auuuuc.......................................gaaugU.................................................UU..UUCUUAAUUCuc...........cagCCUGAGU.A.GACGCGGU..GGUG-..--....--...-.---.-U.GA.U.-UUA.U...........................................................................................UC.-.-....---....----...--..-.-.-CUC...CU.CCGCGU
   NC_006512.1       ACAA...AA.CA....................AGGCUC....CCGUC.....CAAGACCGUAGGUGUA..CC.GC...Gagaaucucaga...........................auaucgaguagU.................................................GG..CACUUAAUUU................CCUACGC.A.GAUGGUGA..UAUCC..--....--...-.GAC.UC.AG.G.CUCU.-...........................................................................................CU.G.G....GU-....----...--..-.A.GAGA...AU.CACCGU
   NC_006513.1       UGCC...GG.--....................GGCGAA....UCGUC.....AAAGACCGCAGGUGUG..GU.C-...-gcuc.........................................ugug-.................................................AC..CGCUUAAGCAuucga.....caauggCCUGCGC.A.GACGGUGU..ACCCA..GA....AC...A.GGA.U-.--.U.----.-c................................................uggcugauuuu.....................ucggccgcgc--.-.-....UCC....UGAU...CC..A.G.G---...-U.CGCCGU
   NC_006526.2       ----...-U.CCgg................aaCCAGUG....CCGUC.....CGAGACUGCGGGAGAU..AG.UU..aU.................................................U.................................................CU..AUCUUAAUCG................CCCGCAU.A.GACGGGGU..UUCAG..UG....UU...U.ACC.AA.CC.U.GUAA.A...........................................................................................GG.AuU....GGU....UGCC...G-..-.-.----...AG.CCCCAC
   NC_007481.1       --CG...AU.AAa.................uuGGACUU....CCGUC.....CAAGACCGUAGGUGGC..U-.--...U.................................................C.................................................-G..GCCUUAAUACu.............caCCUACGU.A.GACGGUGU..--AGA..CC....CC...A.-GA.UA.GA.U.UUUU.C...........................................................................................CU.A.A....UCC....UUCU...GG..C.U.----...CU.CGCCGU
   NC_007645.1       CGGC...AU.AA....................GCCGUAg..gCUGUC.....CAAGACCGCAGGCUUU..UC.CC...Ggcgua.......................................agccgG.................................................GA..AGAUUAAAAGu..............uCCUGCGC.A.GACGGCUG..GUAGU..--....--...-.---.-A.GU.U.UUCC.U...........................................................................................GC.U.-....---....----...--..-.-.--UA...AA.AGCCGU
   NC_007712.1       GCCU...AU.CC....................A-ACCU....CCGUC.....CAAGACCGCAGGUGUG..UG.UC...A.................................................C.................................................AG..CACUUAAUUU...............uCCUGCGU.A.GACGGUGA..CAGAG..CC....UG...A.--A.UA.AC.A.UUUU.C...........................................................................................GU.U.U....---....-GCU...GG..A.U.UCUG...CU.CACCGU
   NC_007794.1       GGUU...CG.CC....................GAUCAU....CCGUC.....CGAGACAGUUGGCGUG..CG.GG...Auu............................................ugcC.................................................CG..CACUUAAUGU................CCAACCU.A.GACGGGGA..AAAGA..GU....UU...C.AGG.C-.--.-.----.-.................................................c.........................................--.-.-....CCU....CGCU...CC..U.C.CA--...--.------
   NC_007954.1       ACUA...AU.A-g.................acCGGCUU....CCGUC.....CAAGACCGCAGGUGUU.gUC.AA...-................................................cA.................................................GAcaUACUUAAUUU................CCUGCGU.A.GACGGUGU..CAGGC..CC....--...-.CAG.CU.AA.A.UUUU.U...........................................................................................UU.A.-....CUG....----...GA..A.A.UCUG...--.CACCGU
   NC_007963.1       ----...--.GC....................GGGGCA....CCGUC.....AAAGACCGCAGGUGCC..GU.GC...Uucgug......................................cgcgaaG.................................................CC..GGCUUAAUCGaccuga...aaaggugCCUGCGC.A.GAUGGUGU..UGCCG..--....--...-.---.--.--.-.----.-ccag.........................................ucuuc.........................................--.-.-....---....----...--..-.U.GGUG...AG.CACCAU
   NC_008345.1       ----...--.--uauu...........agaguCGGUUU....CCGUC.....CAAGACCGCAGGUGUU..AA.UC...Guu.............................................agA.................................................UU..AACUUAAUUU................CCAGCGU.A.GACGGUGU..CAGGC..CC....C-...-.A-G.CU.AA.A.UUUU.U...........................................................................................UU.A.-....-CU....----...GG..A.A.AAUC...UG.CACCGU
   NC_008700.1       ACAA...AU.GC....................GGGUUU....CCGUC.....CAAGACCGCAGGUGUA..AA.UC...Acu.............................................agA.................................................UU..CACUUAAUUU................CCUGCGU.A.GACGGUGA..CAGUC..CC....CA...-.-GU.UU.AG.A.UUUU.-...........................................................................................UU.C.U....---....-GCU...GG..A.U.ACUC...UG.CACCGU
   NC_008709.1       ---G...GC.CU....................UAGGUC....CCUUC.....UGAGACCGUAGGUGUU..UA.GC...Cuu............................................aagU.................................................UA..AACUUAAUUU................CCUACGU.A.GAUGGUGC..CGGAC..CC....C-...-.AGA.CA.GA.A.UUA-.-...........................................................................................--.-.U....UCU....ACCU...GG..-.A.UCCG...AU.UACCGA
   NC_008789.1       GUCU..gAU.AG....................CGACAG....CCGUC.....CGAGACCGCCGGUGCC..CC.--...U.................................................C.................................................GG..GGCUUAAAGGggac.......acccgCCUGCGU.A.GACGGUGG..CGCAA..GC....G-...-.---.A-.--.-.----.-gga............................................gcc.........................................--.-.-....U--....----...GC..A.C.UUCG...-C.CACCGU
   NC_009092.1       ACCA...UU.UUcauucg........uguaaaUGGUUC....ACGUC.....CAAGACCGUAGGUGUU..AA.CG...-aau..........................................aaacG.................................................UU..AGCUUAAUUC................CCUACGU.A.GACGGUGU..CGGAC..CC....--...C.AGA.UA.GA.U.UUA-.U...........................................................................................UC.U.G....CCU....GGAU...--..-.A.UU--...CG.CGCCGU
   NC_009446.1       GCUG...UA.A-gu................ggCAGCUA....UCGUC.....AAAGACUGCAGGUGCU..U-.--...-.................................................-.................................................UA..AGCUUAAUUU................CCUGCAU.A.GAUGGUAG..AUGCG..CU....UC...A.---.-U.CG.A.UU--.-...........................................................................................UG.A.A....---....-GAU...AG..-.C.G---...-A.UACCAA
   NC_009792.1       GCCU...AU.CC....................AGGCCU....CCGUC.....GAAGACCGCAGGUGUU..UC.GU...A.................................................A.................................................GA..AACUUAAUGC................CCUGCGU.A.GACGGUGA..CAGAA..CG....CU...A.AGA.UU.AU.U.UUUU.-...........................................................................................AU.A.C....UCU....GGCU...UG..U.U.UCUG...CU.CACCGU
   NC_009831.1       GUAA...AU.GUa..................uAGGCUU....CCGUC.....CAAGACCGUAGGUGUC..GA.CU...Aua.............................................aaG.................................................UU..AACUUAAUUU................CCUACGU.A.GACGGUGU..CGGAC..CC....C-...-.AGA.UA.GA.U.UUUG.U...........................................................................................UC.U.G....-CU....----...GG..A.-.UAUA...CG.CACCGU
   NC_009901.1       GUUA...AU.AA...................aCAGUCU....CCGUC.....CAAGACCGUAGGUGUU..UG.UU...Caa............................................guaA.................................................CU..AACUUAAUUU................CCUGCGU.A.GACGGUGU..CGGAC..CC....--...-.AGA.UA.GA.U.UUUU.G...........................................................................................UC.U.G....---....--CU...GG..A.A.UUUU..uCG.CGCCGU
   NC_010002.1       CAGC..gAU.GC....................GCCGGG....UCAUC.....CAAGACCGUUGGUGUG..CC.UU...G.................................................C.................................................GG..CACUUAAACCccc.........ggggCCAACGC.A.GAUGGCGA..UCCCG..CU....GC...A.G-A.UG.GA.U.GCAU.U...........................................................................................UC.C.-....--A....AAAC...AG..U.U.GG--...-U.CGCUGC
   NC_010334.1       GUUA...AU.GA...................aUGGCCU....CCGUC.....CAAGACCGUAGGUGUU..UG.UU...Caa............................................guaA.................................................CA..CACUUAAUUU................CCUGCGU.A.GACGGUGU..CGGAC..CC....C-...-.AGA.UA.GA.U.UUUU.G...........................................................................................UC.U.G....---....--CU...GG..AaU.UUUU...CG.CGCCGU
   NC_010506.1       GCCU...AU.UUcgucacugagugaugaaaguAGGCUU....CCGUC.....CAAGACCGUAGGUGUU..AC.CU..a-a..............................................agG.................................................UU..AACUUAAUCU................CCUACGU.A.GACGGUGU..C-GGA..CC....CC...A.GAA.A-.GA.-.-UUU.-...........................................................................................--.-.U....UUC....UACU...GG..A.U.A---...AG.CACCGU
   NC_010519.1       CUUG...AC.CUc..................uCAAGCC....CCGUC.....CAAGACCGUAGGGGAA..AG.AG..u-.................................................-.................................................AU..UUCUUAAUAA...............uCCUACGU.A.GAUGGUGA..UACAG..-A....AU...A.AGA.A-.--.-.-UUU.U...........................................................................................--.-.-....UCU....UGCU...U-..-.C.UGU-...-G.CACCUU
   NC_010554.1       GCCU...AU.CC....................AGACC-....CCGUC.....CAAGACCGCAGGUGUA..AG.--...U.................................................A.................................................AU..UACUUAAUUU...............uCCUGCGU.A.GACGGUGA..GAGAG..CC....AA...A.---.AA.GA.A.UUUU.A...........................................................................................UA.U.-....---....-UCU...GG..A.U.UCUG...CU.CACCGU
   NC_010694.1       GCCU..uAU.CC....................AGGCCU....CCGUC.....CAAGACCGCAGGUGUU..UC.UG...Uca.............................................uuA.................................................GA..GACUUAAUUC................CCUGCGU.A.GACGGUGA..CAGAA..CC....AA...A.AGA.AU.AU.U.UUU-.-...........................................................................................AU.A.G....UCU...uUGCU...GG..A.U.UCUG...CU.CACCGU
   NC_011312.1       AUUA...AA.--....................UAGUCU....CCGUC.....CAAGACCGUAGGCGCU..CG.--...A.................................................A.................................................AG..GGCUUAAUAAa..............aCCUGCGU.A.GACGGUGC..CGAAC..UA....AA...G.GCU.AA.UU.U.UUCG.A...........................................................................................AA.U.U....AGU....UUUC...UG..U.G.A--A...UG.CAUCGU
   NC_011566.1       GUUA..aAG.AU....................UGGUCU....CCGUC.....CAAGACCGUAGGUGUU..GG.UU...Caa............................................guaA.................................................UC..AUCUUAAUUU................CCUACGU.A.GACGGUGU..CGGAC..--....CC...C.AGA.UA.GA.U.UUUA.U...........................................................................................UC.U.G....-CU....GGAU...--..-.C.UUUU...CG.CGCCGU
   NC_011753.2       AGCA...AU.UC...................aGGUCAU....CCGUC....cCAAGACCGUAGGCGCC..GU.AC...Ucuuc........................................ggagaU.................................................AU..GGCUUAAUAAa..............aCCUACGU.A.GGCGAUGU..UGUGG..UU....U-...-.GAA.GU.GA.A.UUUA.U...........................................................................................UC.G.U....UUU....U---...AA..A.U.----...AA.CAUCGU
   NC_011901.1       GCCC..cGG.CC....................CGGUAU....CCGUC.....CAAGACCGCAGGUGCC..GA.--...-gggagcag.................................guggcccg-.................................................-A..GGCUUAAUCGcacu.......gucagCCUGCGC.A.GACGGUGU..CACCC..GA....UU...C.---.--.AG.G.ACUU.-...........................................................................................--.-.-....-CC....UGCU...--..-.G.AGGG...-G.CGCCGU
   NC_012691.1       GUUGgggGU.CU....................CGACUC....CCGUC.....CAAGACCGCAGGUGGU..GU.--...-.................................................-.................................................AA..ACCUUAAUUU...............aCCUGCGU.A.GACGGUGC..CGGAA..CC....CA...G.CGA.GA.AA.G.AUUU.C...........................................................................................UU.U.-....--C....UUCU...GG..A.C.UCUG...-C.CGCCGA
   NC_012880.1       GCCU..aAU.CC....................AGGCCU....CCGUC.....CAAGACCGCAGGUGUU..UC.GC...Uuaccgg....................................aagguagC.................................................GA..AACUUAAUUC...............uCCUGCGU.A.GACGGUGA..CAGAG..CC....UA...A.AGA.A-.AA.U.----.-...........................................................................................UU.U.C....UUU....UACU...GG..A.U.UCUG...CU.CACCGU
   NC_012962.1       GCCU..aAU.CC....................AAGCC-....CCGUC.....CAAGACCGCAGGUGUA..AU.--...U.................................................G.................................................AU..UACUUAAUAU...............uCCUGCGU.A.GACGGUGA..CAGAG..CC....AA...A.---.UG.AA.A.UUCA.U...........................................................................................UU.C.-....---....---U...GG..A.U.UCUG...CU.CACCGU
   NC_012988.1       GCCG...UU.UC....................CGGCUAugucCUGUC.....CGAGACUGCAGGCGCC..GG.GC...G.................................................A.................................................CC..GGCUUAAUCGgcg.........acagCCUGCAC.A.GACGGGGA..AGACC..--....--...-.GAA.--.--.U.UUUU.-..................................................cuacguc...........................uuccucc--.-.-....---....----...--..G.G.GGCC...GU.C-----
   NC_013166.1       -GCA...AU.UC....................AGGGAA....CCGUC.....AAAGACCGUAGGUACU..GG.UG...-aaucgcuuaucucaguag.............auauagagauuacgaccaA.................................................CU..GGUUUAAUGAu.............ugCCUACGC.A.GACGGUGA..--GAC..CU....UG...A.---.-U.GA.A.ACUU.U...........................................................................................UU.A.A....---....--GU...GG..A.A.UCG-...UU.CACCGU
   NC_013422.1       UUUU...UU.CU....................GCAGCG....GCGUC.....AAAGACCGUCGGCGUC..AA.UC..a-a..............................................gaA.................................................UU..GACUUAAAACag...........cagCCGACGC.A.GACGGAUC..CAGUC..--....--...-.---.CU.GA.U.UUUA.U...........................................................................................GC.C.U....---....----...--..-.G.ACUG...--.-GCCGU
   NC_013456.1       AUUA..aGA.CC....................CAGUCU....CCGUC.....CAAGACCGUAGGUGUU..UG.UG...Uaa.............................................aaG.................................................CA..AACUUAAUUA...............uCCUACGU.A.GAUGGUGC..CCGAA..CU....GA...C.AGA.AA.GC.U.CUAU.-..................................................guaaua.............................uaguuaAC.U.U....UCU....UCUG...GG..G.-.---A...AG.CACCUC
   NC_013592.1       GCCU...AU.CC....................AGGCCU....CCGUC.....CAAGACCGCAGGUGUU..UC.GU...C.................................................A.................................................GA..AACUUAAUUU...............uCCUGCGU.A.GACGGUGA..CAGAG..CC....UA...A.AGA.AC.AU.U.UUUA.U..................................................ucuuuu............................uuaaagaAU.A.G....UCC....UGCU...GG..A.U.UCUG...CU.CACCGU
   NC_013861.1       ----...AU.UUg.................guUCCAUG....CCGUC.....GAAGACCGCAGGUGCA..A-.--...-.................................................-.................................................-U..CGCUUAAUUU................CCUGCGC.A.GACGGUGA.aCCGGC..UC....CA...A.---.--.--.-.----.-u...............................................uu.........................................--.-.-....---....-ACA...GA..-.G.ACGG...C-.CACCAU
   NC_013960.1       AUAU...AU.CC....................GUA-GG....CUGUC.....UAAGACCGCAGGCGUG..UU.GA...Gcuuaaua..................................gguuggcgG.................................................GA..GGCCAACUGG................CCUGCGC.A.GACGGUAG..GCCCU..GC....UA...C.---.UA.CU.A.CGGA.A...........................................................................................UG.U.U....GUG....----...GC..A.A.CGG-...-C.UGCCGU
   NC_013961.1       GCCU..uAU.CC....................AGGCCU....CCGUC.....CAAGACCGCAGGCGUU..UC.UU...Uug.............................................ucA.................................................GA..AACUUAAUCU................CCUGCGU.A.GACGGUGA..CAGAA..CC....AA...A.AGA.AU.AU.U.UUU-.-...........................................................................................AU.A.G....UCU...uUGCU...GG..A.U.UCUG...CU.CACCGU
   NC_014012.1       GUAA..aAC.UU....................AGACUU....CCGUC.....CAAGACCGUAGGUGUU..GG.UC...Aaa.............................................ugG.................................................CU..GACUUAAUUU................CCUACGU.A.GACGGUGU..C-GAA..CC....CC...A.GAA.A-.GA.U.U---.-...........................................................................................-U.U.G....UUC....UACU...GG..A.U.U---...AG.CACCGU
   NC_014259.1       AUAA...AU.GUaa................auUUAUCA....GCGUC.....AAAGACCACAGGCGAA..GA.GA...Cuucuu......................................uugaauA.................................................UC..UUCUUAAUAGcc...........cagCCUGCGU.A.GACGCGGU..GGUG-..--....--...-.---.-U.GA.U.-UUA.U...........................................................................................UC.-.-....---....----...--..-.-.-CUC...CU.CCGCGU
   NC_014306.1       GCCU..uAU.CC....................AGGCCU....CCGUC.....CAAGACCGCAGGUGUC..UC.GA...A.................................................A.................................................GA..GGCUUAAUCU................CCUGCGU.A.GACGGUGA..CAGAA..CC....UG...A.AGA.AU.AU.U.UUU-.-...........................................................................................AU.A.G....UCU...uUGCU...GG..A.U.UCUG...CU.CACCGU
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   NC_014532.2       ----...--.--gcc..............ggcGGGGCA....CCGUC.....AAAGACCGCAGGUGCC..GC.CU...Ucac..........................................gcagG.................................................GC..GGCUUAAUCAucccgaa..ggggaggCCUGCGC.A.GAUGGUGU..GGCCG..CC....A-...-.---.--.--.-.----.-ga..............................................ug.........................................--.-.-....---....----...-U..C.U.GGUG...AG.CACCAU
   NC_014541.1       ---C...GU.CC....................GGGCUU....UCGUC.....CAAGACCGCAGGUGAA..GC.CC...C.................................................G.................................................GC..UUCUUAAUUU................CCUGCGU.A.GACGGUGA..UGGA-..CC....UG...A.AGA.AG.AU.U.UUUA.-...........................................................................................AU.C.U....UCU....----...GG..A.A.-CUC...CC.CGCCGU
   NC_014910.1       CAGC..gAU.GC....................GCCGGG....CCAUC.....CAAGACCGUUGGCGUG..CA.GAu.g-................................................gC.................................................UG..CACUUAAAUCcua.........ggggCCAACGC.A.GAUGGCGA..UCCCG..CUg..gAG...A.UGG.AA.AA.G.U---.-...........................................................................................UU.U.C....CCG....AAAC...AG..U.U.GG--...-U.CGCUGC
   NC_015554.1       GCUG...AU.UG...................gCAACUC....CCGUC.....CAAGACCGCAGGUGCG..AU.GU...Ggugauugagguaagag................aacuuucacauuaaacaU.................................................AU..CGCUUAAUACaa...........caaCCUGCGC.A.GACGGUGG..UUUGA..CU....--...-.---.-C.AG.A.CUCU.-...........................................................................................CU.G.-....---....----...GG..G.U.AACA...AA.CACCGU
   NC_015572.1       GCCG...UU.ACu..................uCGGCAA....CCGUC.....AAAGACCGUAGGUGCU..U-.--...-.................................................-.................................................AA..CGCUUAAUUA...............uCCUACGC.A.GGCGGGAG..CUGGA..AC....CA...A.CAG.GU.GA.A.----.-a...............................................gaauccguaggggcaucguaagaugcguuucauagaucccgauUA.A.U....CU-....----...--..-.-.----...--.------
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   NC_015968.1       GCCU...AU.CC....................AGGCCU....CCGUC.....GAAGACCGCAGGUGUU..UC.GC...A.................................................A.................................................GA..GACUUAAUCC................CCUGCGU.A.GACGGUGA..CAGAA..CG....CU...A.AGA.UU.AU.U.UUUU.G...........................................................................................AU.A.C....UCU....GGCU...UG..U.U.UCUG...CU.CACCGU
   NC_016041.1       --CG..uAA.GU....................CAACUC....CCGUC.....CAAGACCGCAGGCGCU..AG.GC...Agugaaagagguaagagaacuuuc..acacacuucucaggaagcgaaaugC.................................................CA..AGCUUAAUACu..............aCCUGCGC.A.GACGGUGG..UUUCA..AC....--...U.---.-C.AG.A.CUCU.-...........................................................................................CU.G.-....---....G---...GA..A.U.G---...AA.CACCGU
   NC_016043.1       ----...--.--ugcu............cugaGUGUUG....CCGUC.....AAAGACCGCAGGAGAU..UU.AG...-acugcuugcaguuc....................aaaaucuuaaaacuaG.................................................UA..AUCU------ag............auCCCGCGU.A.GAUGGCGU..UCGUC..CC....AUg.gA.AGA.AU.UC.A.UUUA.U...........................................................................................GA.G.C....UCU....ACCA...GG..A.A.G---...UA.CGCCGC
   NC_016901.1       GUUU..aAC.UC....................AGGUUU....CCGUC.....CAAGACCGCAGGUGUU..UU.UU...Gua............................................aaaA.................................................AU..AACUUAAUUU................CCUGCGU.A.GACGGUGU..CAGGC..CC....--...C.AGC.-U.AA.A.UUUU.U...........................................................................................UU.-.-....ACU....GGAU...--..A.A.UCU-...-G.CACCGU
   NC_017449.1       GUAU...GU.GA....................AUGCAA....CGAUC.....AAAGACCGUAGGAGUC..AA.GCu.u-................................................gC.................................................UU..GGCUUAAUAUuu............auCCUACGC.A.GACGAUGU..U----..-G....AC...A.---.-A.CC.U.U-UU.U...........................................................................................GG.U.C....---....----...--..-.-.--UA...AA.UAUCGU
   NC_017554.1       GCCU..uAU.CC....................UGGCCU....CCGUC.....CAAGACCGCAGGAGCG..GA.--...-acauccu..................................cggaugua-.................................................-A..UGCUUAAUCC................CCUGCGU.A.GACGGUGA..CAGAA..CC....AA...A.AGA.--.--.U.UUUU.U...........................................................................................--.-.-....CUU....AUCU...GG..A.U.UCUG...CU.CACCGU
   NC_017910.1       GCCU..uAU.CC....................AGGCCU....CCGUC.....CAAGACCGCAGGUGUU..UC.GC...A.................................................A.................................................GA..AACUUAAUUC................CCUGCGU.A.GACGGUGA..CAGAA..CC....UG...A.AGA.AU.AU.U.UUUU.A..................................................a......................................guAG.A.C....UUU....GGCU...UG..U.U.UCUG...CU.CACCGU
   NC_018012.1       GCAA...UC.GC....................UGGAGG....CCGUC.....AAAGACCGCAGGUGCG..CC.AA...Gggcuaucagg............................gauucggccggU.................................................GG..GGCUUAAUGGuuuc........gacgCCUGCGC.A.GACGGUGC..UCCCG..AA....UU...G.GCG.G-.--.U.CUUU.G..................................................cugau...............................gacgg--.-.-....CGC....ACGU...UU..U.U.G---...--.------
   NC_018419.1       AUCU...AU.CC....................AAAACU....UCGUC.....UAAGACCGCAAGUUUG..GU.CA..a-.................................................-.................................................AG..CGCUGAAUUU...............uCCUGUGU.A.GGCCGUGA..AAAGC..CU....AG...AuAAC.AU.AC.A.-UCC.-...........................................................................................GU.U.U....GUU....AGAU...--..-.G.CUUU...-U.CACAGA
   NC_019814.1       AUAU...AA.G-....................ACAUUU....CUGUC.....AAAGAUCGUUGGAGCA..AA.AGa.a-................................................aA.................................................UU..UGCUUAAUAUuguuu......uaauuCCAACGU.A.GACGGCGU..UC---..--....UG...A.GAG.AU.UC.U.UGUU.U..................................................uuu..................................ugauGA.-.A....CUC....AGCU...A-..-.-.----...GA.CGCCGA
   NC_019902.2       CGCC...AC.C-gugg............cgguGGCGGA....CCAUC.....CAAGACCGCAGGCGCG..GU.--...A.................................................C.................................................GC..CGCUCAAUAUcc...........cagCCUGCGC.A.GAUGGUGU..CAGCC..CG....AU...U.--C.A-.--.-.----.-gga............................................aug.........................................--.-.-....---....-UCC...UG..C.G.GCGGg.aAG.CACCAG
   NC_019940.1       -GCG...AG.GC....................CGGAGG....CCGUC.....AAAGACCGCAGGUGCC..CG.CC...Gccgcguc..................................gcguggcgU.................................................CG..GGCUUAAGCCgaa.........agggCCUGCGC.A.GACGGUGC..U----..CC....CG...A.UUC.-A.GG.U.UGAC.C...........................................................................................CC.U.-....GAA....----...--..-.G.ACGG...UG.CAC---
   NC_020283.1       UUGU...AU.AG....................ACAUUU....CAGUC.....AAAGAUCGUUGGAGCU..UU.--...-auguaguuuugcu.......................uaauauuguguuu-.................................................--..UGUAUCAAUU................CCAACGU.A.GACGGCGU..AUUUG..UG....AA...G.UGA.UU.UC.U.UUUA.U...........................................................................................GU.A.A....--G....AACU...CA..G.C.UA--...GA.CGCCGA
   NC_020284.1       AUGU...CU.UCuuaa...........auaagACAUUU....CUGUC.....AAAGAUCGUUGGAGCA..A-.--...A.................................................A.................................................AU..UGCUUAAUAUuguug......uaauuCCAACGU.A.GACGGCGU..UCUGA..-G....AG...A.UUC.U-.UC.U.UUUU.U...........................................................................................GA.-.U....GAA....CUCA...--..G.U.UAG-...-A.CGCCGA
   NC_020299.1       AUGU...UU.UGuauuu..........acaagACAUUU....CUGUC.....AAAGAUCGUUGGAGCA..GA.--...A.................................................A.................................................UU..UGCUUAAUAUuguuu......uaauuCCAACGU.A.GACGGCGU..UCUGA..-G....AG...A.UUC.UU.GU.U.UU--.-..................................................uu....................................gauGA.-.A....CUC....AG--...--..-.U.UAG-...-A.CGCCGA
   NC_020888.1       GCUG...UA.U-guuuac.......augcaggCAGCAG....CUGUC.....AAAGACCGCAGGAGUU..GU.UG...Ugagaccuc.................................gguugauuA.................................................AC..AACUUAAUAUu..............uCCUGCGU.A.GAUAGUGU..GUGGC..CC....CG...U.UCA.GA.AU.-.--U-.-c................................................ugaauug.............................ucacac--.-.-....CGA....GACU...GG..C.-.----...--.------
   NC_021870.1       GCCU...AU.CC....................AGGCCU....CCGUC.....GAAGACCGCAGGUGUU..UC.GU...A.................................................A.................................................GA..GACUUAAUCC................CCUGCGU.A.GACGGUGA..CAGAA..CG....CU...A.AGA.UU.AU.U.UUUA.A..........................................................................................aGU.A.C....UCUu..uGGCU...UG..U.U.UCUG...CU.CACCGU
   NC_023029.1       GUAU...GA.AA....................AUGCGA....UGAUC.....AAAGACCGUAGGAGUC..AC.GCu.u-................................................gC.................................................UU..GACUUAAUAUuu............auCCUAUGC.A.GACGAUGU..-----..UG....AC...A.---.-A.CC.U.UUUU.U...........................................................................................GG.U.C....---....----...UA..-.-.----...AA.UAUCGU
   NZ_AP012273.1     AGCG...GU.--....................CGCUUG....CUGUC.....AAAGACCGCAGGUGCC..GG.--...-aaugccgg.................................gaacggca-.................................................GA..GGCUUAAUCU...............aCCUGCGC.A.GACGGAGC..UU---..-C....GA...A.AUC.AG.GG.C.----.-u................................................g.........................................AC.C.U....GAU....GACG...--..-.-.----...GG.CACCGG
   NZ_AP014635.1     AUUA...AUaGC....................CAGUCU....CCGUC.....CAAGACCGUAGGCGUU..AUcGAu.a-.................................................G.................................................AU..AACUUAAUCGu..............uCCUACGU.A.GAUGGUGC..CCGAA..CU....G-...A.CGA.AA.GC.U.CUAU.U...........................................................................................UA.U.A....UCU....UUCU...UC..U.G.GGAA...UG.CACCUC
   NZ_AP014936.1     ----...GG.CG....................GGGCGC....ACGUC.....AAAGACCGCAGGCGCG..C-.GC...A.................................................-.................................................AG..CGCUUAAUGUcggu........auggCCUGCGC.A.GACGGUGG..ACCCG..AA....AC...A.GGA.UC.--.-.----.-...........................................................................................--.G.C....UCC....UGAA...-U..A.C.GG--...-U.CACCGU
   NZ_AP017928.1     ACCG...C-.--....................CGGUAA....CCGUC.....AAAGACCGCAGGCGCG..CU.--...G.................................................G.................................................UG..CGCUUAAUCGaua..........aggCCUGCGC.A.GACGGUGU..ACUGA..UC....CG...U.GAU.CG.GU.G.----.-a...............................................aagg.....................................ag--.C.C....GUU....UUUG...GG..-.-.----...--.------
   NZ_AP018005.1     GGUAaaaAA.CC....................UACUAA....CUGUC.....GAAGACCGUAGGUGUG..AU.GA...UaaaaaaugucgucauuguguggcaauccagacaauauagacuuuuuuauC.................................................AA..AGCUUAAUAUu..............cCCUACGC.A.GACGGUGA.aCCGUA..--....--...-.---.--.--.-.----.-.................................................u.........................................--.-.-....---....----...--..-.U.ACGG...C-.CACCUU
   NZ_AP018560.1     GUUC...AU.CCc..................gGGACCG....CCGUC.....AAAGACCGCAGGCGCA..GC.CA...Gggugguauggggcu.....................uacccgccaucccgC.................................................GC..UGCUUAAUAAggcauc....ggcccgCCUGCGC.A.GAUGGUGC..CGC--..CC....CG...C.CGG.AA.UC.G.CU--.-...........................................................................................GU.U.U....CUG....GUCA...GG..-.-.----...CA.CACCAG
   NZ_AP018685.1     GCAA...AU.G-....................AUGCUU....CCAUC.....CAAGACCGUAGGCGUU..AA.GC...Aauaau......................................auauugU.................................................UU..AACUUAAUACu..............gCCUACGU.A.GAUGGUGC..CCGAA.cGG....AU...G.GUC.GU.-A.U.UUUU.G...........................................................................................UA.A.A....GAA....AUAU...UC..A.U.UUGGgaaUG.CACCGU
   NZ_AP018689.1     GCAA...AU.G-....................AUGCUU....CCAUC.....CAAGACCGUAGGCGUU..AA.UU...Gauu...........................................uucA.................................................UU..AACUUAAUAAu..............aCCUACGU.A.GAUGGUGC..CCGAA..CU....-G...A.UGG.UC.GU.A.UU--.-..................................................ucau................................aagaaAU.A.U....UCA....UUUG...GG..A.A.----...UG.CACCGA
   NZ_AP018724.1     --CG...UU.G-gu................gcCGGUGC....ACGUC.....GAAGACCGCAGGCGCA..C-.--...-.................................................-.................................................-G..AGCUUAAUGCcugguu....gaggcaCCUGCGU.A.GACGGUGU..CACCC..UG....UC...A.---.--.GG.U.UUCC.-...........................................................................................C-.-.-....---....-CUG...UG..A.G.GG--...-C.CACCGU
   NZ_AP018817.1     AACC...CU.UCg..................gGGUUCA....CCGUC.....CGAGACAGUUGGUGAA..GG.GA..u-c..............................................ugC.................................................CC..UUCUUAAUCU................CCAGCCG.A.GACGGGGA..AAAGU..UC....UU...-.---.--.--.-.----.-ugccggacgggc..........................gcuaugcccgau.........................................--.-.-....---....--UC...GG..-.-.----...--.------
   NZ_AP018933.1     CCCG...UG.C-agu.............ugccCGGGUG....CCGUC.....AAAGACCGCAGGUGUC..UG.GU...Acuuaa......................................ugccuuU.................................................UA..GGC------G................CCUGCGC.A.GAUGGUGG..G----..--....--...-.CCA.UG.UC.U.UUUU.-...........................................................................................GA.U.G....UGG....CCCU...--..-.-.----...--.CCCCG-
   NZ_AP019007.1     GCCU...AU.CC....................AGGCCU....CCGUC.....GAAGACCGCAGGUGUU..UC.GC...A.................................................A.................................................GA..GACUUAAUCC................CCUGCGU.A.GACGGUGA..CAGAA..CG....CU...A.AGA.UU.AU.U.UUUA.-...........................................................................................AU.A.C....UCU....GGCU...UG..U.U.UCUG...CU.CACCGU
   NZ_AP019651.1     AUUA..uAA.CC....................CAGUCU....CCGUC.....CAAGACCGUAGGUGUC..UG.--...-aguuuauu................................uuauaaaug-.................................................AU..GACUUAAUCA...............uCCUACGU.A.GAUGGUGC..CCGAA..CU....GA...C.AGA.AA.GC.U.CUAU.-..................................................gcaaa..............................uaguuaCC.U.U....UCU....UCUG...GG..A.-.----...AG.CACCUA
   NZ_AP019654.1     AUUA..uGA.CC....................CAGUCU....CCGUC.....CAAGACCGUAGGUGUC..UG.AG...-uuuauuu...................................aauaaacG.................................................CU..GGCUUAAUUA...............uCCUACGU.A.GAUGGUGC..CCGAA..CU....GA...C.AGA.AA.GC.U.CUAU.-..................................................guaaa..............................uaguuaCC.U.U....UCU....UCUG...GG..A.-.----...AG.CACCUC
   NZ_AP019657.1     ACUG...AA.UUaug..............accCAGUCU....CCGUC.....CAAGACCGUAGGUGUU..GA.GC...Uuuguuu.....................................acaaagC.................................................CU..GACUUAAUCA...............uCCUACGU.A.GAUGGUGC..CCGAA..CU....GA...C.AGA.AA.GC.U.CUAU.-..................................................guaaa..............................uaguuaCC.U.U....UCU....UCUG...GG..A.-.----...AG.CACCUA
   NZ_AP019782.1     GCCG...GU.GCg..................cCGGUUA....UCGUC.....AAAGACCGCGGGUGCG..CA.--...U.................................................G.................................................AG..CGCUUAAUGGcgg.........gaagCCCGCGC.A.GACGGUCG..UUCGC..--....-G...C.CGG.U-.--.-.----.-a...............................................ug.........................................--.-.-....CCG....GUA-...--..-.A.CG--...-A.GACCGA
   NZ_AP019783.1     GGCA...CA.-C....................CGGUAA....CCGUC.....AAAGACCGCGGGCGUG..CC.CU...A.................................................G.................................................GG..CGCUUAAUCAuga..........aaaCCCGCGU.A.GACGGUGU.a-CUGAaaCC....UA...A.AUG.--.--.G.UUAU.A..................................................cag...................................aag--.-.-....---....--CC...GU..A.A.UGGG...C-.------
   NZ_AP021869.1     GCAA...AU.G-....................AUGCUU....CCAUC.....CAAGACCGUAGGCGUU..AA.CU...Gauauuu....................................auauuggC.................................................UU..AACUUAAUAAu..............aCCUACGU.A.GAUGGUGC..CCGAA..CU....G-...A.UGG.UCgUA.U.U---.-..................................................ucgu................................uagaaAU.A.U....UCA....UUUG...GG..A.-.----..aUG.CACCGA
   NZ_AP022254.1     GUUGgggGU.UU....................CGACCU....CCGUC.....CAAGACCGCAGGAGGC..C-.GC...-.................................................A.................................................AA..GCCUUAAUUCu..............uCCUGCGU.A.GACGGUGC..CGGAAacCC....AG...C.GAG.AA.AG.A.UU--.-...........................................................................................CU.U.U....CUC....UUCU...GG..A.A.UCCU...GC.UACCGC
   NZ_AP022345.1     UGAU..gGG.CA....................ACCAGA....UCGUC.....AAAGACCGCAGGUGCG..UU.--...U.................................................C.................................................AA..CGUUUAAUUGcucuuc...ggagcauCCUGCGC.A.GAUGGUGG..UCCCA..GA....AC...A.GGA.UU.U-.-.----.U..................................................gcggcaucg......................gccgcgaggc--.-.-....UCU....GAUU...UC..-.G.----...GU.CACCGU
   NZ_AP022508.1     GCCU...AU.CC....................AGGCCU....CCGUC.....GAAGACCGCAGGUGUU..UC.GC...A.................................................A.................................................GA..AACUUAAUCC................CCUGCGU.A.GACGGUGA..CAGAA..CG....CU...A.AGA.UU.AU.U.UUUA.-...........................................................................................AU.A.C....UCU....GGCU...UG..U.U.UCUG...CU.CACCGU
   NZ_AP022547.1     GCCU...AU.CC....................AGGCCU....CCGUC.....GAAGACCGCAGGUGUU..UC.GC...A.................................................A.................................................GA..GACUUAAUGC................CCUGCGU.A.GACGGUGA..CAGAA..CG....CU...A.AGA.UU.AU.U.UUUG.G...........................................................................................AU.A.C....UCU....GGCU...UG..U.U.UCUG...CU.CACCGU
   NZ_AP022839.1     ----...AU.UUg.................guUCCAUG....CCGUC.....GAAGACCGCAGGUGCU..--.--...A.................................................A.................................................--..AGCUUAAUUU................CCUGCGC.A.GACGGUGA.aCCGGC..UC....CG...A.---.--.--.A.UAUA.A...........................................................................................--.-.-....---....-UCU...GA..-.G.ACGG...C-.CACCAU
   NZ_AP022843.1     -GUU...AG.GC....................AGGGCA....UCGUC.....AAAGACCGCAGGUGCC..GC.AU...Cuuuu........................................aagggU.................................................GC..GGCUUAAUCGccuua.....aaagcgCCUGCGC.A.GAUGGUGU..GGCCGccAG....UU...G.GUU.GA.GG.U.UUUU.A...........................................................................................GC.C.A....AAC....CGCU...UU..C.U.GGUG...AG.CACCAU
   NZ_AP023032.1     ----...--.--gg...............cuuAUGCCC....UCAUC.....CAAGACCGUAGGUGCU..AG.UU..u-.................................................-.................................................CU..AGCUUAAUCU................CCUACGU.A.GAUGGUGA..GGAAA..CC....CA...A.GAA.-U.AA.A.UUUU.-...........................................................................................UU.A.U....UCU....----...GG..A.C.AACC...-A.AACCGU
   NZ_AP023033.1     ----...--.--gg...............cuuAUGCCC....UCAUC.....CAAGACCGUAGGUGCU..AG.UU..u-.................................................-.................................................CU..AGCUUAAUCU................CCUACGU.A.GAUGGUGA..GGAAA..CC....CA...-.AGA.AU.AA.A.UUU-.-...........................................................................................UU.A.U....UCU....----...GG..A.C.AACC...-A.AACCGU
   NZ_AP023054.1     ----...--.--ga...............cguGAGCUU....UCGUC.....CAAGACCGUAGGUGUU..UC.AU...U.................................................A.................................................GA..AACUUAAUCUa..............gCCUGCGU.A.GACGGUGC..C----..-A....AG...A.ACU.CG.AU.U.GUUA.A..................................................uauuuu.............................ucguauAU.U.A....GGU....CUAU...UG..G.G.-AAC...UG.CACCGU
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   NZ_CP049331.1     UCAG...AA.UU....................CAGUCU....CCGUC.....CAAGACCGUAGGCGUU..AU.CUcuc-.................................................G.................................................AU..AACUUAAUACa..............aCCUACGU.A.GAUGGUGC..CCGAA..CC....UG...A.CAG.AA.AG.A.UUUC.-..................................................auuuuuuauuuu................aaaaauggguuaaCU.U.U....C--....UUCU...GG..A.A.C---...UG.CACCUA
   NZ_CP049608.1     GCCU..uAU.CC....................AGGCC-....CCGUC.....CAAGACCGCAGGUGUU..UC.AU..u-.................................................-.................................................GA..AGCUUAAUUU................CCUGCGU.A.GACGGUGA..CAGAA..CC....UG...A.AGA.CC.UU.U.UUUA.A...........................................................................................AA.G.U....UUUcuuuGGCU...UG..U.U.UCUG...CU.CACCGU
   NZ_CP049869.1     ----...--.--uug..............ccgGGCGCA....CCGUC.....CGAGACAGCUGCUGAG..GG.CU..c-.................................................-.................................................CC..CUCUUAAUCC................GCAGCCU.A.GACGGGGAcaGGAAU..CA....UU...C.GGC.GG.AC.U.UCA-.G...........................................................................................GU.C.U....GCC....GUCG...UG..C.G.U---...--.------
   NZ_CP050150.1     GCCU..uAU.CC....................AGACCU....CCGUC.....CAAGACCGCAGGUGCA..UC.GA...A.................................................A.................................................GA..UGCUUAAUCG...............uCCUGCGU.A.GACGGUGA..CAGAA..CC....UA...A.AA-.-A.AU.C.UUUU.G...........................................................................................A-.-.-....--U....UACU...GG..A.U.UCUG...CU.CACCGU
   NZ_CP050253.1     CCUU...AU.UC....................CAGACC....CCGUC.....CAAGACCGUAGGUGUA..GUuGA..a-................................................aA.................................................AU..UACUUAAUUU...............uCCUACGU.A.GACGGUGA..CAGAA..CC....AA...A.CAU.UU.AU.U.UU--.-..................................................aauucgauag....................auauaaauuga--.-.A....AUA....AACU...GG.aC.C.UCUG...CU.CACCGU
   NZ_CP050316.1     GCCA...AU.AC....................AAGCC-....CCGUC.....CAAGACCGUAGGUGAA..AU.GG...Cgug...........................................agcA.................................................AU..UUCUUAAUUUaa............auCCUACGU.A.GAUGGUGA..ACAGA..--....--...-.---.-C.AG.A.AUUU.U...........................................................................................CU.G.C....---....---U...--..-.U.CUGG...-A.CACCUU
   NZ_CP050508.1     GCCU...AU.CC....................AGGCCU....CCGUC.....GAAGACCGCAGGUGUU..UC.GU...A.................................................A.................................................GA..AACUUAAUGC................CCUGCGU.A.GACGGUGA..CAGAA..CG....CU...A.AGA.UU.AU.U.UUUG.G...........................................................................................AU.A.C....UCU....GGCU...UG..U.U.UCUG...CU.CACCGU
   NZ_CP050854.1     GCCU...AU.CC....................AGGCCU....CCGUC.....CAAGACCGCAGGUGUC..UU.GU...A.................................................A.................................................GA..GACUUAAUCU...............uCCUGCGU.A.GACGGUGA..CAGAG..CC....UG...A.AGA.-A.CA.U.UUGA.U...........................................................................................UG.U.-....CUU....UGCU...GG..A.U.UCUG...CU.CACCGU
   NZ_CP051180.1     GAUC..uAA.UC....................GAGCUC....UCGUC.....CAAGACCAUAGGUGGA..AC.GC...A.................................................A.................................................GU..UUCUUAAUAUu.............cgCCUGUGU.A.GACGGUGA..UGG--..AC....CU...A.AGA.AG.AA.U.UUUU.A...........................................................................................UU.C.U....UCU....GGAA...--..-.-.-CCU...CC.CACCGU
   NZ_CP051181.1     CGCU...UU.AU....................UUUGUU....UCGUC.....CAAGACGGUGGGUGGU..GU.CAuuu-.................................................G.................................................GU..GCCUUAAUUU................CCUGCCUgA.GACGGGAA..UAACC..AA....UU..cA.GCC.UG.GG.U.UC--.-...........................................................................................CU.C.G....GGC....-GAU...UU..U.G.GCUU...UG.CCCCGU
   NZ_CP051183.1     ----...--.--gcu.............ucggCGAGGG....UCAUC.....AAAGACCGCAGGUGAA..--.--...-gcgcgaucauaaggcuuaau........gagucuugcaguagaucguua-.................................................--..AUCUUAAUUU................CCUGCGC.A.GAUGGUGU..GA-GC..CC....CG...A.UUC.AG.AU.U.UCUU.A...........................................................................................AU.U.A....AAG....UGCU...GA..A.U.UA-U...CA.CACCUA
   NZ_CP051461.1     ACCU...CG.GC....................AGGUC-....--AUC.....CAAGACCGUUGGUGCA..GC.AG...-guguu......................................aaacccA.................................................GU..UGCUUAAUCGaaag........acagCCAACGC.A.GAUGGCGG..UCCCG.cUG....CG...A.AGA.GU.UU.G.AAA-.-...........................................................................................AA.A.G....UCU....GAAA...CA.gU.U.GG--...-U.CGCUGA
   NZ_CP051548.1     GCCU...AU.CC....................AGGCCU....CCGUC.....GAAGACCGCAGGUGUU..UC.GU...A.................................................A.................................................GA..GACUUAAUCC................CCUGCGU.A.GACGGUGA..CAGAA..CG....CU...A.AGA.UU.AU.U.UUUU.-...........................................................................................AU.A.C....UCU....GGCU...UG..U.U.UCUG...CU.CACCGU
   NZ_CP051883.1     GUUG..g-G.--gg...............cuuCGACCU....CCGUC.....CAAGACCGCAGGAGGC..U-.GC...-.................................................A.................................................AA..GCCUUAAUCCu..............uCCUGCGU.A.GACGGUGC..CGGAAacCC....AG...C.GAG.AA.AG.A.UU--.-...........................................................................................CU.U.U....CUC....UUCU...GG..A.A.UCCU...GC.UACCGC
   NZ_CP052766.1     GCUG..aUU.AU....................CAGCUC....CCGUC.....CAAGACCGCAGGUGCG..AU.AC...Aguaaaagaaguaagag................accuuuuacauucaaugU.................................................AU..UGCUUAAUAAga...........caaCCUGCGC.A.GACGGUGC..UUUCG..--....--...-.ACU.-C.AG.A.CUCU.-...........................................................................................CU.G.G....GGU....AA--...--..-.C.GA--...-A.CACCGU
   NZ_CP053381.1     ----...--.--gcg..............ugaGGGGCG....CCGUC.....AAAGACCGCAGGUGCC..GC.CC...Ucucuc.......................................gagugG.................................................GC..GGCUUAAUCUccccuu...gggguugCCUGCGC.A.GAUGGUGU..GGCCG..C-....--...-.---.--.--.-.----.-cag............................................aac.........................................--.-.-....---....----...-G..C.U.GGUG...UG.CACCAU
   NZ_CP053383.1     GCCC...GU.CAgggc............gugaGGGGCG....CCGUC.....AAAGACCGCAGGUGCC..GC.CC...Ucucuc.......................................uagugG.................................................GC..GGCUUAAUCUccccua....ggggugCCUGCGC.A.GAUGGUGU..GGCCG..C-....--...-.---.--.--.-.----.-cag............................................aac.........................................--.-.-....---....----...-G..C.U.GGUG...AG.CACCAU
   NZ_CP053391.1     AUGA...GA.AU....................UUAUCA....GCGUC.....AAAGACCUCAGGCGAA..AA.GA...Uguuguuuu................................cgaauagcaC.................................................UU..UUCUUAAUAAac...........cagCCUGCGU.A.GACGCGGU..GGUG-..--....--...-.---.--.--.-.----.-ugau.........................................uuguu.........................................--.-.-....---....----...--..-.-.CCUC...CU.CCGCGU
   NZ_CP053921.1     GCGC..aAG.CC....................GAUCAU....CCGUC.....CGAGACAGUUGGUGAA..GGcGA...-uc.............................................uaG.................................................CC..UUCUUAAUUU................CCAGCCU.A.GACGGGGA..CAGAG..AU....UU...C.ACG.CG.GG.-.----.-..................................................gucgc..............................aaggcaCC.G.U....CGU....UUCG...--..-.-.----...--.------
   NZ_CP054043.1     GCCU..uAU.CC....................AAGCCU....CCGUC.....CAAGACCGCAGGUGUU..CU.GC...A.................................................A.................................................AG..AACUUAAUCU................CCUGCGU.A.GACGGUGA..CAGAA..CC....UA...A.AGA.AA.UU.U.UUUC.-..................................................ucuuuuuuauaaa..............gaauugaaaagaau--.A.G....UCU...uUGCU...GG..A.U.UCUG...CU.CACCGU
   NZ_CP054058.1     GCCU..aAU.CC....................AGGCCU....CCGUC.....GAAGACCGCAGGCGUU..UC.GU...C.................................................A.................................................GA..AACUUAAUAC................CCUGCGU.A.GACGGUGA..CAGAA..CG....CU...A.AGA.UU.AU.U.UUUG.-...........................................................................................AU.A.C....UCUu..uGGCU...UG..U.U.UCUG...CU.CACCGU
   NZ_CP054491.1     CUUC...AU.UG....................CGACGG....UCGUC.....AAAGACCGUAGGUGCC..GA.GC...-aaguag.....................................uugaugU.................................................GA..GGCUUAAUGGguuu........ccagCCUGCGU.A.GACGGUGU..-----..UC....CC...-.AAC.UA.GG.A.UUUC.-...........................................................................................CC.U.G....GUU....UUC-...GG..-.-.----...-U.CACCGU
   NZ_CP054856.1     --CU...GC.GU....................UGCUCA....CCGUC.....CGAGACAGCUGCCGGG..GG.GC...U.................................................U.................................................CC..CCCUUAAUCU................GCAGCCU.A.GGCGGGGA..ACA--..--....--...-.---.--.--.-.----.-ggaaa.......................................uuucca.........................................--.-.-....---....----...--..-.-.-CGG...CC.CUUCGC
   NZ_CP055055.1     GCCU...AU.CC....................AGGCCU....CCGUC.....GAAGACCGCAGGAGUU..UC.GC...A.................................................A.................................................GA..AACUUAAUCC................CCUGCGU.A.GACGGUGA..CAGAA..CG....CU...A.AGA.UU.AU.U.CUUC.U...........................................................................................AU.A.U....UCU....GGCU...UG..U.U.UCUG...CU.CACCGU
   NZ_CP055292.1     GCCU...AU.CC....................AGGCCU....CCGUC.....GAAGACCGCAGGAGUU..UC.GC...A.................................................A.................................................GA..AACUUAAUCC................CCUGCGU.A.GACGGUGA..CAGAA..CG....CU...A.AGA.UU.AU.U.CUUU.U...........................................................................................AU.A.U....UCU....GGCU...UG..U.U.UCUG...CU.CACCGU
   NZ_CP059082.1     ----...--.--ucac...........uggccGGGGCA....UCGUC.....AAAGACCGCAGGUGCC..GC.GC...Uugauaaguacgc........................aaguacuuacaagG.................................................GC..GGCUUAAUUGcccua.....uaagcgCCUGCGC.A.GAUGGUGU..GGCCG..--....CC...A.GUU.GG.UU.A.AGCU.-..................................................u......................................aa--.-.-....GAC....GGCU...UU..C.U.GGUG...AG.CACCAU
   NZ_CP059319.1     ----...--.--gc...............gggAUUGUA....CCGUC.....CGAGACAGCAGGUGCG..GG.GA..c-ua.............................................ugC.................................................CC..CGCUUAAUCU................CCUGCCC.A.GACGGGGA..AAAGU..-U....UA...C.CGG.--.--.-.----.-ccgcgccucagggu......................ucaggccgggucug.........................................--.-.-....CCG....UGCU...--..-.C.CUU-...--.------
   NZ_CP059558.1     AUGA...AU.AU....................UUAUCA....GCGUC.....AAAGACCUCAGGUGAG..AA.GU...Guuuuc.......................................gaacaU.................................................UU..UUCUUAAUCUac...........cagCCUGAGU.A.GACGUGGU..GGUG-..--....--...-.---.--.--.-.----.-ugau.........................................uuguu.........................................--.-.-....---....----...--..-.-.CCUC...CU.CCACGU
   NZ_CP059565.1     ACUU...AA.UCaaua...........auuuuAAGUAG....GUGUC.....CAAGACCGUAGGGAUC..GA.GA..gA.................................................U.................................................UU..AAUAUAAAAC................CCUACGC.A.GACGGUAG.uCCUGA..AG....UU...U.UUAaGC.AA.A.AUUG.C...........................................................................................UU.G.U...gAAA....UGUC...UU..U.U.CAGG...-U.UGCCGC
   NZ_CP059571.1     ACUU...AU.CAag...............auuAAGUAG....AUGUC.....CAAGACCGUAGGGAUC..--.GC...A.................................................A.................................................--..GAUUUAAUCGuaa.........aagcCCUACGC.A.GACGGUAG.uCCUGA..AA....CG...U.AUU.AC.GA.G.AUUG.C...........................................................................................UU.G.U....AAG...aUGUC...UU..U.U.UAGG...-U.UACCGC
   NZ_CP059690.1     GCCU...AU.CC....................AGACC-....CCGUC.....CAAGACCGCAGGUGUA..AG.-U...-.................................................G.................................................AU..UACUUAAUUU...............uCCUGCGU.A.GACGGUGA..GAGAG..CC....AA...U.AAA.GA.AU.U.--A-.U...........................................................................................AU.-.-....--A....UUCU...GG..A.U.UCUA...CU.CACCGU
   NZ_CP059888.1     GCUU...AU.UCuuaa...........uggguAAGCUU....CCAUC.....CAAGACCGUAGGUGUU..AU.U-...-ggguguu..................................uuauuacuC.................................................AA..AGCUUAAUAUu.............ugCCUGCGU.A.GAUGGUGA..--UAA..CC....UC...A.GAA.GA.AU.U.CCUA.A...........................................................................................AC.G.C....UU-....--CU...GG..C.U.U---...UU.CACCGA
   NZ_CP060035.1     ----...--.--ugu.............cgauGGUCUU....CCGUC.....CGAGACAGUCGGUGAA..GG.GA...Aua.............................................ugC.................................................CC..UUCUUAAUUU................CCGGCCU.A.GACGGGGA..AAAGU.uCU...uUA...C.CGG.CC.GGgC.CUUG.C...........................................................................................CU.G.U....CCG....GGUC...UG..C.C.UGUU...CU.CCCUGA
   NZ_CP060052.1     GGCC...UG.CC....................UGUCAU....CCGUC.....CGAGACAGUUGGUGAC..CG.GA...Auu.............................................ugC.................................................CG..GUCUUAAUUG................CCAGCCU.A.GACGGGGA..AA---..--....--...-.---.--.--.-.----.-cgagauu....................................uacgcgg.........................................--.-.-....---....----...--..-.-.--UC...AG.CCCCGC
   NZ_CP060092.1     ----...--.--uug.............ggggCUCAGU....CCGUC.....AAAGACCGUAGGCAAG..UG.GC...A.................................................A.................................................CA..CUUUUAAUUGcaucgaa.agauuaagCCUACGC.A.GAUGGUGG..-----..--....CC...C.AAU.UC.AG.U.AUUU.G...........................................................................................CU.G.G....AUU....UGAU...--..-.-.----...-A.CACCGA
   NZ_CP060401.1     CCUU..aAU.CC....................AAG-CC....CCGUC.....CAAGACCGCAGGCGUA..AG.UA...Cguagaa....................................auaaauuA.................................................CU..UACUUAAUAU................CCUGCGU.A.GACGGUGA..CAGAG..CC....AA...A.---.UG.AA.A.UUUA.U...........................................................................................UU.-.-....---....-UCU...GG..A.U.UCUG...CU.CACCGU
   NZ_CP060495.1     ---G...AU.CGgcucu.........gccgguCGCUCA....CCGUC.....CGAGACAGCCGGUGCC..CC.UG...Auu.............................................ugG.................................................GG..GGCUUAAUUU................CCAGCCU.A.GACGGGGA..CAGUU..--....--...-.---.--.--.-.----.-gaaauuugggcgcgg....................caccgccgccccugc.........................................--.-.-....---....----...--..-.C.AUCG...CA.UCCCGU
   NZ_CP060782.1     GUGC...--.--....................GCGCAA....CCGUC.....CGAGACAGUUGCUGGG..GC.--...U.................................................A.................................................GC..CCCUUAAUUU................GCAGCCU.A.GACGGGGA..CAGGAauCA....UU...C.---.--.--.-.----.-ggagacgcccg............................cgggugucccg.........................................--.-.-....---....-UCG...UG..C.Gu----...--.------
   NZ_CP061035.1     -UUC...GC.CCgg...............gacGGAAAA....CCGUC.....CGAGACAGCAGGGGCC..GG.CU..u-.................................................-.................................................CC..GGCUUAAUAU................CCUGCCU.A.GACGGGGA..AUGGA..AA...uUC...A.AGA.UC.GC.G.CCUG.C...........................................................................................GC.G.A....UCU....GCUU...UG..G.U.CCGC...CA.CAC---
   NZ_CP061280.1     GCCU...AU.CU....................AAGCC-....CCGUC.....UAAGACUGUAGGGGU-..--.GA...A.................................................A.................................................--..-ACUUAAUUA...............uCCUACAU.A.GAUGGUGA..ACAGA..--....--...-.---.-C.AG.A.AUUC.U...........................................................................................CU.G.C....---....---U...--..-.U.CUGU...-A.CACCUU
   NZ_CP061510.1     GACC...GU.UAcg................gcGGUCGU....CCGUC.....CGAGACAGCUGGUGGG..GG.CAaug-.................................................G.................................................CU..CCCUUAAUUU................CCGGCCU.A.GGCG----..GGGAA..CA....GA...G.---.--.--.U.UUU-.-a................................................ucgggcaacg.......................ccgucaggg--.-.-....---....----...UG..U.U.UCCC...AA.UCGCGC
   NZ_CP062500.1     -UGA...UU.UUugaa...........gcaauUCAUAA....UCGUCuauccCAAGACCGUAGGCGCC..--.--...-gaaccuuu................................uuaagguaa-.................................................--..AGCUUAAUAAa..............aCCUACGU.A.GGCGAUGU..UGUCG..UU....U-...-.GAA.AU.GA.A.UUUA.U...........................................................................................UC.A.U....UUU....UA--...-A..A.U.----...AA.CAUCGU
   NZ_CP063056.1     ACCU...AU.UC....................AAG-CC....CCGUC.....CAAGACCGUAGGGGAU..AG.--...-.................................................-.................................................CU..AUCUUAAUAA...............uCCUACGU.A.GAUGGUGU.aCAGAA..UA....--...-.AGA.A-.--.-.-UUU.U...........................................................................................--.-.-....UCU....----...UG..C.U.UCUG...GG.CACCGA
   NZ_CP063138.1     GUAU...GA.AA....................AUGCAA....CGAUC.....AAAGACCGUAGGAGUC..GA.GCu.u-................................................gC.................................................UU..GGCUUAAUAUuu............auCCUACGC.A.GACGAUGU..-----..UG....AC...A.---.-A.CC.U.UUUU.U...........................................................................................GG.U.C....---....----...UA..-.-.----...AA.UAUCGU
   NZ_CP063425.1     GCCU..aAU.CC....................AGGCCU....CCGUC.....GAAGACCGCAGGUGUU..UC.GU...A.................................................A.................................................GA..AGCUUAAUUC................CCUGCGU.A.GACGGUGA..CAGAA..CC....UA...A.AGA.UU.AU.U.UUUA.A..........................................................................................aGU.A.C....UCUu..uGGCU...UG..U.U.UCUG...CU.CACCGU
   NZ_CP063663.1     --CG...AU.AAa.................uuGGGCUU....CCGUC.....CAAGACCGUAGGCGGC..U-.--...U.................................................C.................................................-G..GCCUUAAUGAauu..........uuaCCUACGU.A.GACGGUGU..GAAU-..CC....CC...A.GAU.-A.GA.U.UUUU.-...........................................................................................CC.U.A....AUC....UUCU...GG..C.U.----...CU.CGCCGU
   NZ_CP064781.1     ----...--.--guuu...........cgggcGGCAGA....UCGUC.....AAAGACCGCAGGUGUG..GG.GA...Uguc...........................................aguC.................................................CU..CACUUAAGCGaa...........aggCCUGCGC.A.GACGGUGU..ACUC-..--....--...-.---.--.--.-.----.-aga...........................................acag.........................................--.-.-....---....----...--..-.-.GAUU...UA.CGCCGC
   NZ_CP064782.1     ----...--.--uucc...........gugucCCAGGA....UCGUC.....AAAGACCGCAGGUGUU..GG.AC..c-u..............................................ggU.................................................CU..GACCUAAGCGccgca......aggugCCUGCGC.A.GACGGUGU..UACCC..GA....AC...A.GGA.UU.CU.-.--C-.-..................................................cauuggcaau.....................ugccgaucgu--.G.U....UCC....UGCU...UU..A.G.G---...-U.CGCCGU
   NZ_CP064795.1     GCUG...UA.CCua...............uuaCAGCUC....CCGUC.....CUAGACCGCAGGUGCG..GU.GC...Agcgaaagaaguaagag................accuuucgcauucaaugC.................................................AU..AGCUUAAUACau...........caaCCUGCGC.A.GACGGUGG..UUUGG..CU....C-...-.---.--.AG.A.CUCU.-...........................................................................................CU.G.G....---....----...GG..A.A.CAAA...--.CACCGU
   NZ_CP065044.1     GCCU...AU.CC....................AGGCCU....CCGUC.....CAAGACCGCAGGUGUU..UC.GA...A.................................................A.................................................GA..AACUUAAUCU...............uCCUGCGU.A.GACGGUGA..CAGAG..CC....UA...A.AUA.AC.GU.U.UUUC.-..................................................uuuuuua..........................uaaagaauAA.U.U....UUU....UACU...GG..A.U.UCUG...CU.CACCGU
   NZ_CP065150.1     AAUU...UG.-A....................AAUUAU....CUAUC....cCAAGACCGUAGGCGCU..AU.CG...-auuuucau................................cagauuguuG.................................................AU..GGCUUAAUAAa..............aCCUACGU.A.GGCGAUGU..UGUGG..UU....U-...-.GAA.GU.GA.A.UUUA.U...........................................................................................UC.A.U....UUU....U---...AA..A.U.----...AA.CAUCGU
   NZ_CP065178.1     GCCU...AU.CC....................AGGCCU....CCGUC.....CAAGACCGCAGGUGUU..UC.GU...A.................................................A.................................................GA..AACUUAAUUU...............uCCUGCGU.A.GACGGUGA..CAGAG..CC....UA...A.AUA.AC.GU.U.UUUC.-..................................................uuuauauuu.......................auaaagaauAA.U.U....UUU....UACU...GG..A.U.UCUG...CU.CACCGU
   NZ_CP065425.1     UAAA...UA.CA....................UUUGUA....CCGU-.....--AGACAGUAGGUGCU..AU.--...U.................................................A.................................................GU..AGCUUAAUUU................CCUACCG.A.GGUAAUGC..GAUAU..--....AU...A.---.-U.UA.U.AGUU.U...........................................................................................AA.A.-....---....AGCU...--..-.-.-AUA...UG.CAUUAA
   NZ_CP065534.1     GCCU..gAU.CC....................AGGCCU....CCGUC.....CAAGACCGCAGGUGUU..UC.GA...G.................................................A.................................................GA..GACUUAAUUU...............uCCUGCGU.A.GACGGUGA..CAGAG..CC....UG...A.AGA.AA.AG.U.UUGA.-...........................................................................................CU.U.G....UCU...uUGCU...GG..A.U.UCUG...CU.CACCGU
   NZ_CP065626.1     GCCUa.uUU.CC....................AGACCU....CCGUC.....CAAGACCGCAGGUGUC..UC.GU...G.................................................A.................................................GG..GACUUAAUCG...............uCCUGCGU.A.GACGGUGA..CAGAG..CC....CG...A.AGA.AA.UC.U.UUUU.U..........................................................................................aGA.U.G....UCU....----...GG..A.U.UCUG...CU.CACCGU
   NZ_CP065640.1     GCCU..aAU.CC....................AGGCCU....CCGUC.....CAAGACCGCAGGUGUA..UC.GU...A.................................................A.................................................GA..UACUUAAUUU...............uCCUGCGU.A.GACGGUGA..CAGAG..CC....UA...A.AGA.AA.UU.U.UUUA.U..................................................aa....................................aagAA.U.G....UCU...uUGCU...GG..A.U.UCUG...CU.CACCGU
   NZ_CP065651.1     ---G...GU.UU....................CGACCU....CCGUC.....CAAGACCGCAGGUGGC..U-.GC...-.................................................A.................................................AG..GCCUUAAUCCu..............uCCUGCGU.A.GACGGUGC..CGGAAacCC....AG...C.GAG.AA.AG.A.UUU-.-...........................................................................................CU.U.U....CUC....UUCU...GG..A.A.UCCU...GC.UACCGC
   NZ_CP065670.1     CCCG...UU.--....................CGGAUU....CCGUC.....CAAGACAGCAGGUGCC..GG.GG...Aauu...........................................ugcC.................................................CC..GACUUAAUCU................CCUGCCG.A.GACGGGGA..AAA--..--....--...-.-GG.A-.--.U.----.-uu.............................................ugccggucgugccac................uugcuggucccgc--.-.-....CCG....GUC-...--..-.-.----...UG.CCCCGC
   NZ_CP065725.1     UCGA...UU.UG....................GCGCUG....CUGUC.....AAAGACCGCUGGAGUU..UU.UA...Agcuuag.....................................uuaguuA.................................................AA..AACUUAAAAUaau..........uauCCAGCGU.A.GACGGCGU..CCCAA..-C....GG...A.AGA.AU.UC.A.AUUC.A...........................................................................................GA.A.C....UCU....GCCC...U-..-.-.--GG...UA.CGCCGC
   NZ_CP065728.1     --AC...AA.CG...................gGUUGUG....CUGUC.....UAAGACCGUAGGUGCU..GA.U-...-gguuauucuuaaac.....................auuggucuaaugaa-.................................................UG..AGUAAAAUCAuu............cgCCUACGC.A.GACGGUGA..A----..--....--...-.---.--.--.-.----.-a................................................a.........................................--.-.-....---....----...--..-.-.---U...AU.CACCGU
   NZ_CP065745.1     ---G...GU.UU....................CGACCU....CCGUC.....CAAGACCGCAGGAGGC..U-.GC...-.................................................A.................................................AA..GCCUUAAUGUu..............uCCUGCGU.A.GACGGUGC..CGGAAacCC....AG...C.GAG.AA.AG.U.UU--.-...........................................................................................CU.U.U....CUC....UUCU...GG..A.A.UCCU...GC.UACCGC
   NZ_CP065748.1     CAGC..gAU.GC....................GCCGGG....UCAUC.....CAAGACCGUUGGUGUG..CC.UU...G.................................................C.................................................GG..CACUUAAACCuca.........ggggCCAACGC.A.GAUGGCGA..UCCCG..CU....GC...A.G-A.UG.GA.U.GCAU.U...........................................................................................UC.C.-....--A....AAAC...AG..U.U.GG--...-U.CGCUGC
   NZ_CP065838.1     GCCU...AU.CC....................AGACCU....CCGUC.....GAAGACCGCAGGUGUU..UC.GC...A.................................................A.................................................GA..AACUUAAUGC................CCUGCGU.A.GACGGUGA..CAGAA..CG....CU...A.AGA.UU.AU.U.UUUG.G...........................................................................................AU.A.U....UCU....GGCU...UG..U.U.UCUG...CU.CACCGU
   NZ_CP066783.1     ----...AA.CCc..................gGGUGGG....UCAUC.....CAAGACCGUUGGUGUG..AU.UC..g-.................................................-.................................................AU..CACUUAAUCAuga..........cgaCCAACGC.A.GAUGGCGA..UCCCG..CUg..cAG...A.UGG.AA.AA.-.----.-...........................................................................................-U.U.U....CCA....AAAC...AG..U.U.GG--...-U.CGCUGC
   NZ_CP067393.1     CCUG...G-.--....................CGGGGG....CUAUC.....CAAGACCGUAGGUGGU..UA.AC...C.................................................U.................................................UA..AUCUUAUAGG................CCUACGC.A.GAUGGUGC..-----..UC....C-...-.---.--.--.-.----.-cgauucca..................................augaauca.........................................--.-.-....---....----...--..-.-.----...GA.CACCAA
   NZ_CP069213.1     ACAA...AU.GC....................GGGUUU....CCGUC.....CAAGACCGCAGGUGUA..AA.UC...Auu.............................................agA.................................................UU..CACUUAAUUU................CCUGCGU.A.GACGGUGA..CAGUC..CC....CA...-.-GU.UU.AG.A.UUUU.-...........................................................................................UU.C.U....---....-GCU...GG..A.U.ACUC...UG.CACCGU
   NZ_CP069510.1     CUUG..c-C.U-c.................auCAAGCC....CCAUC.....GAAGACUGUAGGAGUG..CU.U-...-.................................................-.................................................GG..CACUUAAUUA...............uCCUACAU.A.GAUGGUGA..ACAGA..C-....--...-.AG-.--.AA.U.UUCU.C...........................................................................................--.-.-....---....UGCU...--..-.U.CUG-...GA.CACCUU
   NZ_CP069798.1     ACCC...GG.CUug................ccGGGUAG....AUGUC.....CAAGACCGUAGGGAGC..UU.--...G.................................................C.................................................GG..GCUUUAAUUGuuu..........aacCCUACGC.A.GACGGUAG..UCCCA..GA....AC...A.---.--.-U.U.UUUU.-..................................................ccaggcuug.......................uccugucaa--.-.-....--U....GUCU...UU..U.U.GGG-...-U.UGCCGC
   NZ_CP070290.1     GCCU...AU.CC....................AGACCU....CCGUC.....GAAGACCGCAGGUGUU..UC.GU...A.................................................A.................................................GA..GACUUAAUAC................CCUGCGU.A.GACGGUGA..CAGAA..CG....CU...A.AGA.UU.AU.U.CUUU.U...........................................................................................AU.A.U....UCU....GGCU...UG..U.U.UCUG...CU.CACCGU
   NZ_CP071070.1     GCCU...AU.CC....................AGGCCU....CCGUC.....GAAGACCGCAGGUGUU..UC.GU...A.................................................A.................................................GA..AACUUAAUGC................CCUGCGU.A.GACGGUGA..CAGAA..CG....CU...A.AGA.UU.AU.U.UUUG.G...........................................................................................AU.A.U....UCU....GGCU...UG..U.U.UCUG...CU.CACCGU
   NZ_CP071325.1     GCUG...UU.ACugcg............guaaCGGCCU....CCGUC.....AAAGACCGUAGGCGUU..GU.AA...-cuga.........................................aaagU.................................................UC..GACUUAAUAAu..............aCCUACGU.A.GACGGUGC..CAGAA..CA....--...-.UGA.UU.GA.U.GUAU.G...........................................................................................UC.U.U....UCU....----...UG..G.A.UCU-...-G.CGCCGU
   NZ_CP071383.1     GCCU...AU.CC....................AGGCCU....CCGUC.....GAAGACCGCAGGUGUU..UC.GC...A.................................................A.................................................GA..GACUUAAUCC................CCUGCGU.A.GACGGUGA..CAGAA..CG....CU...A.AGA.UU.AU.U.UUUG.G...........................................................................................AU.A.C....UCU....GGCU...UG..U.U.UCUG...CU.CACCGU
   NZ_CP071405.1     GCCU..uAU.CC....................UGGCCU....CCGUC.....CAAGACCGCAGGAGCC..GC.UU...Aucucc.......................................ggauaA.................................................AU..GGCUUAAUAU................CCUGCGU.A.GACGGUGA..CAGAA..CC....AA...A.---.-A.GA.A.UUUU.U...........................................................................................UC.U.U....---....AGCU...GG..A.U.UCUG...CU.CACCGU
   NZ_CP071409.1     GCCU..uAU.CC....................AGGCCU....CCGUC.....CAAGACCGCAGGAGUU..UC.GC...A.................................................A.................................................GA..AACUUAAUUUu..............uCCUGCGU.A.GACGGUGA..CAGAA..CC....UG...A.AGA.AU.AU.U.UUU-.-...........................................................................................AU.A.G....UCU...uUGCU...GG..A.U.UCUG...CU.CACCGU
   NZ_CP071487.1     CCUU...AU.CU....................CAAGCC....CCGUC.....CAAGACCGUAGGUGAA..CC.UG...-ugu..........................................gaacA.................................................GU..UUCUUAAUGAaaa..........caaCCUACGU.A.GAUGGUGA..ACAGA..--....--...-.---.-C.AG.A.AUUA.U...........................................................................................CU.G.C....---....----...--..U.U.CUGU...-A.CACCUU
   NZ_CP071502.1     GCCC...GC.U-guu.............uagcGGGUUU....CCAUC.....CAAGACCGCAGGUGUU..UU.UC...A.................................................A.................................................UA..AACUUAAUUU................CCUGCGU.A.GAUGGUGU..CAGGC..CC....C-...-.AGA.UA.GA.A.UUUU.-...........................................................................................UC.U.-....---....-GCU...GG..A.U.AAUC...UG.CACCGU
   NZ_CP071503.1     GCCC...GU.AUa.................acGGGCUU....CCGUC.....CAAGACCGCAGGUGUU..AU.UCa.a-a...............................................aG.................................................GU..AACUUAAUUU................CCUGCGU.A.GACGGUGU..CAGGC..CC....C-...-.AGA.UA.GA.U.UUAG.U...........................................................................................UC.U.G....-CU....----...GG..A.U.UAUC...UG.CACCGU
   NZ_CP071504.1     GCUU...UU.UGg..................cAGGUUU....CCAUC.....CAAGACCGCAGGUGUU..UU.UC...A.................................................A.................................................AA..AACUUAAUUU................CCUGCGU.A.GAUGGUGU..CAGGC..CC....C-...A.-GA.UA.GA.A.UUC-.-...........................................................................................--.-.-....UUC....UGCU...GG..A.U.AAUC...UG.CACCGU
   NZ_CP071527.1     ----...AU.UUg.................guUCCAUG....CCGUC.....GAAGACCGCAGGGGCC..--.--...U.................................................C.................................................--..GGCUUAAUUU................CCUGCGC.A.GACGGUGA.aCCGGC..U-....CC...A.---.-U.U-.-.----.-u...............................................aa.........................................-A.-.-....---....----...AG..A.G.GCGG...C-.CACCAU
   NZ_CP071766.1     AUGA...GA.AU....................UUAUCA....GCGUC.....AAAGACCUCAGGCGAG..AG.UA...Guuuu........................................augcuG.................................................CU..UUCUUAAUCUuc...........cagCCUGGGU.A.GACGCGGU..GGUG-..--....--...-.---.-U.GA.U.-UUA.U...........................................................................................UC.-.-....---....----...--..-.-.-CUC...CU.CCGCGU
   NZ_CP071802.1     GCCU...AU.CC....................AAGCCU....CCGUC.....CAAGACCGCAGGUGUU..CU.GC...A.................................................A.................................................AG..AACUUAAUUU................CCUGCGU.A.GACGGUGA..CAGAG..CC....UA...A.AGA.AA.UU.U.UUUC.-..................................................uuuuuu............................auaaaaaAU.U.G....UCU...uUUCU...GG..A.U.UCUG...CU.CACCGU
   NZ_CP072110.1     GUAC...UA.CUag...............uuaGUGCCU....CCAUC.....CAAGACCGUAGGUGUU..AG.C-...-gugaau.....................................uaucacA.................................................AU..AACUUAAUUU................CCUACGC.A.GAUGGUGA..U--AA..CC....C-...-.-CA.GA.AG.A.UUCC.A...........................................................................................CU.U.C....U--....----...GG..C.U.----...UU.CACCGG
   NZ_CP072133.1     AUAC...AU.U-....................GCGUUU....CCGUC.....CAAGACCGUAGGAGGC..--.UU...-.................................................U.................................................--..GCCUUAAUCUuu............auCCUACGU.A.GACGGUGU..GAA--..UC....CC...A.GCU.AG.AU.U.UCCU.A...........................................................................................AU.C.U....---....-UCU...GG..U.U.----...CU.CGCCGU
   NZ_CP072425.1     AUAA...AU.U-....................GCGUUU....CCGUC.....CAAGACCGUAGGUGUA..AC.UA..a-.................................................-.................................................GU..UACUUAAUUC................CCUACGU.A.GACGGUGU..GAA--..UC....CC...A.GC-.-U.AG.A.UUUU.C...........................................................................................CU.A.A....-UC....UUCU...GG..U.-.--U-...CU.CGCCGU
   NZ_CP072455.1     GCCU..aAU.CC....................AAGCC-....CCGUC.....CAAGACCGCAGGCGUA..A-.--...A.................................................A.................................................-U..UACUUAAUAU................CCUGCGU.A.GACGGUGA..CAGAG..CC....AA...A.AGA.--.--.A.AUUU.A...........................................................................................UU.U.-....---....-UCU...GG..A.U.UCUG...CU.CACCGU
   NZ_CP072549.1     AUGA...AA.AU....................UUAUCA....GCGUC.....AAAGACCGCGGGCGAG..GG.AA...Guuuu........................................augcuU.................................................CU..CUCUUAAUAGcc...........cagCCUGCGU.A.GACGCGGU..GGUGU..--....--...-.---.--.--.-.----.-gau...........................................uugu.........................................--.-.-....---....----...--..-.U.CAUC...CU.CCGCGU
   NZ_CP072652.1     GCCU...AU.CC....................AGGCCU....CCGUC.....CAAGACCGCAGGUGUA..UC.GA...A.................................................A.................................................GG..UACUUAAUCCu..............uCCUGCGU.A.GACGGUGA..CAGAG..CC....UA...A.AGA.AU.UU.U.UUU-.-...........................................................................................AU.G.G....UCU...uUACU...GG..A.U.UCUG...CU.CACCGU
   NZ_CP072844.1     GUAU...UG.CUug................caAUGCCU....CCAUC.....CAAGACCGUAGGUGUU..AA.AU...Agaua........................................ucuuaU.................................................UU..GACUUAAUGU................CCUACGC.A.GAUGGUGA..UGACC..CC....AG...A.AGA.UU.CC.A.CUUC.U...........................................................................................GG.-.C....UUU....CACC...GG..A.-.ACCG...UU.------
   NZ_CP072916.1     ----...--.--uuac...........agcggCGUAGG....UCAUC.....CAAGACCGCUGGUGUG..GC.--...U.................................................U.................................................GC..CACUUAAUACu..............uCCAGCGC.A.GAUGGCGA..UC-CC..GC....UG...C.AGA.UG.GA.U.GAAU.G...........................................................................................UC.C.C....UCU....AACA...GU..U.G.G---...-U.CGCUGC
   NZ_CP073236.1     GCCU...AU.CC....................AGGCCU....CCGUC.....GAAGACCGCAGGUGUC..UC.GU...A.................................................A.................................................GA..GACUUAAUGC................CCUGCGU.A.GACGGUGA..CAGAA..CG....CU...A.AGA.UU.AU.U.UUUG.G...........................................................................................AU.A.C....UCU....GGCU...UG..U.U.UCUG...CU.CACCGU
   NZ_CP073587.1     GCCCgauAU.UC....................GGGCUU....CCGUC.....CAAGACCGCAGGUGUC..UC.UU...Agu.............................................uaA.................................................GA..UACUUAAUUU................CCUGCGU.A.GACGGUGU..CAGGC..CC....C-...-.AGA.UA.GA.U.-UUG.-...........................................................................................--.-.-....UUC....UGCU...GG..A.U.UAUC...UG.CACCGU
   NZ_CP073754.1     GCCGu.gUA.--a..................aCGGCAG....CCGUC.....AAAGACCGUAGGGGCC..U-.--...-.................................................-...............................................c.-A..GGCUUAAUAA...............uCCUACGC.A.GACGGAAG..CUGGA..GC....C-...-.---.--.--.-.----.-gcaaagcuggugau......................agggaccguaaggg.........................................--.-.-....---....----...GC..-.-.----...--.------
   NZ_CP073910.1     -CGC...AU.CCuuc..............gggGUGCGU....CCGUC.....CGAGACAGUUGGUGAA..GG.GA...Auc.............................................ugC.................................................CC..UUCUUAAUGU................CCAGCCU.A.GACGGGGA..AAAGU..UCu..uCG...C.CGG.GC.GC.G.CUUU.U...........................................................................................GCcG.U....CCG....GGUC...--..-.-.----...--.------
   NZ_CP074346.1     CCUU...UU.UC....................AAGUC-....CCGUC.....CAAGACCGUAGGUGAG..AA.CG...-cuuauaaau...............................auuguagguG.................................................UU..UUCUUAAUUU...............uCCUGCGU.A.GAUGGUGU..CAGAA..CG....AU...A.GAA.--.GA.A.UUU-.-...........................................................................................UU.U.-....--C....----...UG..C.U.UCUG...UU.CACCUU
   NZ_CP074352.1     GCCU..uAU.CC....................AGGCCU....CCGUC.....CAAGACCGCAGGUGUU..UC.GU...A.................................................A.................................................GA..GACUUAAUUC................CCUGCGU.A.GACGGUGA..CAGAA..CC....UG...A.AGA.AU.AU.U.UUUA.A...........................................................................................GU.A.C....UCUu..uGGCU...UG..U.U.UCUG...CU.CACCGU
   NZ_CP074570.1     ACCGg.aAU.UC....................AGGUUC....CCGUC.....CAAGACCGUAGGCGCA..AA.--...-uacuca....................................uagagua-.................................................AA..UGCUUAAUCGuga..........aagCCUACGC.A.GACGGUAG..UUCAG..--....--...-.CUC.A-.--.-.----.-gacuc.......................................ucuggg.........................................--.-.-....---....----...GA..A.A.UGA-...-A.CACCGU
   NZ_CP075188.1     -GUU...-G.CC....................AGCAGA....UCGUC.....AAAGACCGCAGGCGCC..CC.GGu.a-................................................aC.................................................GG..AGCUUAAUAGcgag.......agcacCCUGCGC.A.GACGGUGU..-----..CC....CA...G.AAC.AA.GA.U.UUUC.U..................................................gcuggccgguaac...............gggcagcauagcuUC.U.G....GUU....--CA...GG..-.-.----...-U.CGCCGU
   NZ_CP075189.1     ----...--.--aagca.........aucaccGGCAGA....UCGUC.....AAAGACCGCAGGCGCC..UU.GGu.a-................................................aC.................................................AA..GGCUUAAUCGcgaa.......agcacCCUGCGC.A.GACGGUGU..-----..CC....CA...G.AAC.AA.GA.U.UUUC.U..................................................gcugaccggcaac...............gggcggcauagcuUC.U.G....GUU....--CA...GG..-.-.----...-U.CGCCGU
   NZ_CP075564.1     ---G...GU.UU....................CGACCU....CCGUC.....CAAGACCGCAGGUGGC..U-.GC...-.................................................A.................................................AG..GCCUUAAUCUu..............uCCUGCGU.A.GACGGUGC..CGGAAacCC....AG...C.GAG.AA.AG.U.UUU-.-...........................................................................................CU.U.U....CUC....UUCU...GG..A.A.UCCU...GC.UACCGC
   NZ_CP076643.1     AUUA..aGA.CC....................CAGUCU....CCGUC.....CAAGACCGUAGGCGUU..AUcGAa.a-.................................................G.................................................AU..AACUUAAUGCa..............aCCUACGU.A.GAUGGUGC..CCGAA..CU....GA...C.AGA.AA.GC.U.CUAA.U..................................................uuuau..............................uaguuaCC.U.U....UCU....UCUG...GG..A.A.----...UG.CACC--
   NZ_CP077080.1     CCUG...G-.--....................CGGGGG....CUGUC.....CAAGACCGUAGGCGAC..--.GC...A.................................................A.................................................--..GUCUUAAACCac...........aagCCUACGC.A.GAUGGUGC..-----..UC....--...-.CCG.GU.UC.C.UUAC.C...........................................................................................GA.A.U....CA-....----...--..-.-.----...GA.CACCAA
   NZ_CP077095.1     CCUG...G-.--....................CGGGGG....CUAUC.....CAAGACCGUAGGCGGC..--.GC...A.................................................A.................................................--..GCCUUAAACCac...........aagCCUACGC.A.GAUGGUGC..-----..UC....C-...-.CGA.-U.UC.G.UUUA.C...........................................................................................GA.A.-....UCA....----...G-..-.-.----...-A.CACCAA
   NZ_CP077366.1     GCCU..uAU.CC....................UGGCCU....CCGUC.....CAAGACCGCAGGAGCU..GC.UU...-aucuc......................................cggauaU.................................................UC..CGCUUAAUAC................CCUGCGU.A.GACGGUGA..CAGAA..CC....AA...A.---.-A.GA.A.UUUU.U...........................................................................................UC.U.U....---....AGCU...GG..A.U.UCUG...CU.CACCGU
   NZ_CP077392.1     GCCU...AU.CC....................AGGCCU....CCGUC.....GAAGACCGCAGGUGUU..UC.GC...A.................................................A.................................................GA..AACUUAAUCC................CCUGCGU.A.GACGGUGA..CAGAA..CG....CU...A.AGA.UU.AU.U.UUA-.A...........................................................................................AU.A.C....UCU....GGCU...UG..U.U.UCUG...CU.CACCGU
   NZ_CP079718.1     GCAU..cAU.U-aa................uuAGGCUU....CCGUC.....CAAGACCGCAGGUGUU..UA.CU...-uua...........................................acgG.................................................UU..UACUUAAUUU................CCUGCGU.A.GACGGUGU..CAGGC..CC....--...C.AGC.-U.AA.A.UUUU.U...........................................................................................UU.-.-....ACU....GGAU...--..A.A.UCU-...-G.CACCGU
   NZ_CP079742.1     ---G...GU.UU....................CGACCU....CCGUC.....CAAGACCGCAGGAGGU..GG.-C...-.................................................A.................................................AC..ACCUUAAUAUu..............uCCUGCGU.A.GACGGUGC..CGGAAacCC....AG...C.GAG.AA.AA.-.----.-...........................................................................................UU.U.U....CUC....UUCU...GG..A.A.UCCU...GC.CACCGC
   NZ_CP080327.1     CCGC...CU.UGugc.............ggggGCGGAA....CCGUC.....CGAGACAGCAGGUGCU..CC.UG...Aucc..........................................agucA.................................................GG..GGCUUAAUGU................CCUGCCG.A.GACGGGGA..ACGGA..AU....UU...U.UCG.GC.CA.U.UCCG.G...........................................................................................UG.G.U....CG-....----...--..-.C.CCUU...CC.CCUCGG
   NZ_CP080328.1     -GUC...GA.GC....................GAGGCG....CCGUC.....AAAGACCGCAGGUGCC..GC.CU...Cgucuuuu...................................gagacggG.................................................GC..GGCUUAAUCGcccua......gagcgCCUGCGC.A.GAUGGUGU..GGCCGccAG....UU...G.GUU.AA.CG.C.UUUU.-...........................................................................................CG.C.A....AGC....CGCU...UU..C.U.GGUG...AG.CACCAU
   NZ_CP080624.1     GUCCcgaAU.AC....................GGACAG....AUGUC.....GAAGACCGCCGGUGCG..--.GA...A.................................................-.................................................-A..CGCUUAAUGUg..............gCCGGCGC.A.GAUGGUGU..CCGAG..GC....CU...U.UAA.A-.--.-.----.-gccacg......................................ggucac.........................................--.-.-....---....-UGG...GC..C.C.UCA-...--.------
   NZ_CP080627.1     GCCA...AG.CA....................GGGCA-....UCGUC.....AAAGACCGCAGGUGCC..GC.AU...Cuuuu........................................aagggU.................................................GC..GGCUUAAUCGcccua.....aaagcgCCUGCGC.A.GAUGGUGU..GGCCGccAG....UU...G.GUU.GA.GG.U.UUUU.A...........................................................................................GC.C.A....AAC....CGCU...UU..C.U.GGUG...AG.CACCAU
   NZ_CP081832.1     ----...--.--agucgca.....acaaagcaAGGCUC....CCGUC.....CAAGACCGUAGGUGUA..CC.GC...Gaguaucccgga...........................auauuggguagU.................................................GG..CACUUAAUUU................CCUACGC.A.GAUGGUGA..UAUCC..--....--...-.GAC.UC.AG.G.CUCU.-...........................................................................................CU.G.G....GU-....----...--..-.A.GAGA...AU.CACCGU
   NZ_CP081860.1     ----...--.-U....................GCGCUU....CCGUC.....CAAGACCGUAGGUGGC..U-.--...U.................................................C.................................................-G..GCCUUAAUCG...............uCCUACGU.A.GACGGUGU..--GAA..UC....CC...A.GC-.-U.AG.A.UUUU.C...........................................................................................CU.A.-....AUC....UUCU...GG..C.U.----...CU.CGCCGU
   NZ_CP081864.1     GCCU..gAU.CC....................AGGCCU....CCGUC.....CAAGACCGCAGGUGCU..UC.AA...Cguuuucagguuu.........................accugaaaaaagA.................................................GA..UGCUUAAUUU...............uCCUGCGU.A.GACGGUGA..CAGAG..CC....UA...A.AGA.A-.AA.U.----.-...........................................................................................UU.U.C....UUU....UACU...GG..A.U.UCUG...CU.CACCGU
   NZ_CP082141.1     GCCU..uAU.CC....................AGGCCU....CCGUC.....CAAGACCGCAGGUGUU..UC.GU...A.................................................A.................................................GA..AACUUAAUCU................CCUGCGU.A.GACGGUGA..CAGAA..CC....AA...A.AGA.AU.AU.U.UUUU.-...........................................................................................AU.A.G....UCU...uUGCU...GG..A.U.UCUG...CU.CACCGU
   NZ_CP082346.1     GCCU..gAU.CC....................UGGCCU....CCGUC.....CAAGACCGCAGGAGCA..GA.--...-accucuu..................................cggaagug-.................................................-A..UGCUUAAUAU................CCUGCGU.A.GACGGUGA..CAGAA..CC....AA...A.AAG.A-.--.A.UUUU.U...........................................................................................--.-.U....CUU....CACU...GG..A.U.UCUG...CU.CACCGU
   NZ_CP082787.1     GCCU...AU.CC....................AGGCCU....CCGUC.....CAAGACCGCAGGUGUA..UC.GC...A.................................................A.................................................GG..UACUUAAUCUu..............uCCUGCGU.A.GACGGUGA..CAGAG..CC....UA...A.AGA.AU.UU.U.UUU-.-..................................................cuuuuuu..........................aaaaagaa-U.G.G....UCU...uUGCU...GG..A.U.UCUG...CU.CACCGU
   NZ_CP082833.1     GCCU...AU.CC....................AGGCCU....CCGUC.....GAAGACCGCAGGUGUU..UC.GC...A.................................................A.................................................GA..AACUUAAUCC................CCUGCGU.A.GACGGUGA..CAGAA..CG....CU...A.AGA.UU.AU.U.UUUG.G...........................................................................................AU.A.U....UCU....GGCU...UG..U.U.UCUG...CU.CACCGU
   NZ_CP082926.1     GUUA...AU.AGa..................uGAGCUU....CCGUC.....CAAGACCGCAGGUGUC..AA.UC..g-ua.............................................agG.................................................UU..AACUUAAUUU................CCUGCGU.A.GACGGUGU..CAGGC..CC....CA...-.--G.CU.AA.A.AUUU.U...........................................................................................UU.A.-....---....--CU...GG..A.A.UAUC...UG.CACCGU
   NZ_CP083448.1     GCCU..aAU.CC....................UGGCCU....CCGUC.....CAAGACCGCAGGAGCG..GA.AC...Uuucuu......................................cggaaaC.................................................UC..UGCUUAAUAU................CCUGCGU.A.GACGGUGA..CAGAA..CC....AA...A.AAG.A-.--.U.UUAU.U...........................................................................................U-.-.-....CUU....CACU...GG..A.U.UCUG...CU.CACCGU
   NZ_CP083451.1     ---U...UU.CCa..................uGGCGGG....CCAUC.....CAAGACCGUUGGUGUG..AU.GCa.a-.................................................G.................................................AU..CACUUAAAUCuc...........uggCCAACGC.A.GAUGGCGA..UCCCG..CU....GC...A.-GA.UG.GA.U.GAAU.U...........................................................................................UC.C.G....---....AAAC...AG..U.U.GG--...-U.CGCUGC
   NZ_CP083737.1     GCCU..uAU.CC....................AGACCU....CCGUC.....CAAGACCGCAGGUGCG..UU.GA...A.................................................A.................................................GA..CGCUUAAUCG...............uCCUGCGU.A.GACGGUGA..CAGAA..CC....UA...A.A--.-A.AA.U.CUUU.U...........................................................................................U-.-.-....GAU....UACU...GG..A.U.UCUG...CU.CACCGU
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   NZ_LR134515.1     GCCU...AU.CU....................AAGCC-....CCGUC.....CAAGACCGUAGGUGAA..UA.AG...Uuu.............................................ucU.................................................UA..UUCUUAAUAAa.............aaCCUACGU.A.GAUGGUGA..ACAGA..--....--...-.---.-C.AG.A.AUUU.U...........................................................................................CU.G.C....---....---U...--..-.U.CUGG...-A.CACCUU
   NZ_LR134516.1     ACUU...AU.UGu..................uAAGUAG....AUGUC.....CAAGACCGUAGGGAUC..GU.--...-.................................................-.................................................AA..GAUUUAAUAGuua..........uacCCUACGC.A.GACGGUAG.uCCUGA..AU....UG...A.AUA.GC.AA.G.AUUG.C...........................................................................................UU.G.U....UAAa..uGUCU...UU..-.U.UAGG...-U.UGCCGC
   NZ_LR134533.1     --UA...AU.U-a.................uuAAGUAG....AUGUC.....CAAGACCGUAGGGAUC..UU.UU..u-.................................................-.................................................AA..GAUUUAAUUAcaa..........aacCCUACGC.A.GACGGUAG..UCCUU..AA....AA...U.UCA.--.--.U.G---.-..................................................ucaagcaa........................uucuugcuc--.-.-....UGU....GUCU...UU..U.A.GG--...-U.UGCCGC
   NZ_LR699007.1     GCCU..uUU.CC....................GGGCC-....CCGUC.....CAAGACCGCAGGUGUA..AG.-U...-.................................................G.................................................AU..UACUUAAUUU...............uCCUGCGU.A.GACGGUGA..CAGAG..CC....AC...A.A--.-G.AA.U.UUUA.-...........................................................................................UU.C.G....---....---A...GU..A.U.UCUG...CU.CACCGU
   NZ_LS483250.1     ---G...UU.GC....................UUGCUU....CCGUC.....CAAGACCGUAGGAGUU..GU.GC...Uuacgcuguaagaaugacuuaa......ucaugaucggcuauguuuaguuA.................................................AA..UACUUGAUCUu..............uCCUACGU.A.GAUGGUGU..AGGAC..CU....CU...G.AAG.--.A-.A.UUUA.U...........................................................................................--.-.-....UUU....UUCU...GG..A.A.UCC-...-A.AGCCGU
   NZ_LS483422.1     GCCU...UU.CC....................AGACC-....CCGUC.....CAAGACCGCAGGUGUA..GU.UC...Ugu............................................aauU.................................................GC..UACUUAAUCGu..............aCCUGCGU.A.GACGGUGA..CAGAG..AU....--...-.ACC.AA.GA.A.UUUA.U...........................................................................................UC.U.G....G--....----...--..C.U.UCUG...CU.CACCGU
   NZ_LS483429.1     ACCU...AU.UC....................AAG-CC....CCAUC.....CAAGACCGUAGGGGAG..--.-U...A.................................................-.................................................--..AUCUUAAUUA...............uCCUACGU.A.GAUGGUGA.aCAGAA..UA....--...-.AGA.A-.--.-.-UUU.U...........................................................................................--.-.-....UCU....----...UG..C.U.UCUG...GG.CGCCGA
   NZ_LS483443.1     CCUC...AU.UC....................AAG-CC....CCGUC.....CAAGACCGUAGGGGA-..--.GC...A.................................................A.................................................--..-UCUUAAUCA...............uCCUACGU.A.GAUGGUGA.aCAGAA..UA....--...-.AGA.A-.--.-.-UUU.-...........................................................................................--.-.-....UCU....----...UG..C.U.UCUG...UG.CACCGA
   NZ_LT906434.1     ACUUa.aUU.UU....................AAGUAG....AUGUC.....CAAGACCGUAGGGAUC..GU.--...-.................................................-.................................................AA..GAUUUAAUCGuaa.........uugcCCUACGC.A.GACGGUAG..UCCUG..AA....UU...G.AAU.AA.UC.A.UAA-.-..................................................ucaacc............................guuucguGA.U.U....AAU....AUCU...UU..U.U.AGG-...-U.UGCCGA
   NZ_LT906442.1     ----...--.--auaga.........uuagguUCCAUG....CCGUC.....GAAGACCGCAGGUGC-..--.GA...A.................................................A.................................................--..-GCUUAAUUU................CCUGCGC.A.GACGGUGA.aCCGGC..UC....CU...-.---.--.--.-.----.-gua...........................................uaaa.........................................--.-.-....---....----...G-..A.G.ACGG...C-.CACCAU
   NZ_LT906448.1     CCAA...AU.UC....................AA-GCC....CCGUC.....CGAGACCGUAGGUGAA..AU.GA...Ugga...........................................uauC.................................................AU..CUCUUAAUUAa..............uCCUACGU.A.GAUGGUGA..ACAGA..--....--...-.---.-C.AG.A.AUUU.U...........................................................................................CU.G.C....---....---U...--..-.U.CUGG...-A.CACCUU
   NZ_LT906451.1     ----...--.--aca.............ugguUCGAUG....CCGUC.....GAAGACCGCAGGUGCC..UA.GA...U.................................................U.................................................AG..AGCUUAAUAU................CCUGCGC.A.GACGGUGA..ACCGG..CU....CC...G.---.-G.GA.U.UUU-.-...........................................................................................UC.U.-....---....----...GG..G.A.CGG-...C-.CACCAU
   NZ_LT906463.1     ACCU...AU.UC....................AAG-CC....CCGUC.....CAAGACCGUAGGGAAC..CU.U-...-ggccu.......................................uggccU.................................................CG..GUCUUAAUCA...............uCCUACGU.A.GAUGGUGU.aCAGAA..UA....--...-.AGA.A-.--.-.-UUU.U...........................................................................................--.-.-....UCU....----...UG..C.U.UCUG...GG.CACCGA
   NZ_LT906479.1     GCCU...AU.CC....................AGGCCU....CCGUC.....CAAGACCGCAGGUGUA..UC.GA...A.................................................A.................................................GG..UACUUAAUCU...............uCCUGCGU.A.GACGGUGA..CAGAG..CC....UA...A.AGA.AU.UU.U.UUU-.-..................................................cuuuuuua.........................uaaaagaa-U.G.G....UCU...uUGCU...GG..A.U.UCUG...CU.CACCGU
   NZ_LT906482.1     CUUG...AU.UG....................UAAGUA....GAGUC.....CAAGACCGUAGGGAUC..GU.--...-.................................................-.................................................AA..GAUUUAAUAUuu...........uacCCUACGU.A.GACGGUGG.uCCUGA..GAu..uAU...G.AGC.AA.GC.A.AUU-.-...........................................................................................GC.U.U....GCA....AAAUgucUU..U.U.CAGG...-U.UGCCGA
   NZ_OU594967.1     GUUA...AU.UU....................UAGCCC....ACGUC.....CAAGACCGCAGGAGAU..GA.GC...U.................................................U.................................................UC..AUCUUAAAUA...............cCCUGCGC.A.GACGGUGA..AAGAA..CC....C-...-.UGA.AU.AG.U.UUUU.A...........................................................................................UG.A.C....UUA....UUCU...GG..-.A.UCUG...-U.AGCCGU
   NZ_OU907312.1     GCUU...GU.UGaau..............aacAAGCUU....UCGUC.....CAAGACCGUAGGGGCG..UG.UU...Aacgguuguu...............................aucguuaguU.................................................CA..GGCUUAAUAA...............uCCUACGU.A.GACGGUGA..CAGGG..CU....CU...G.---.--.--.-.----.-u...............................................ug.........................................--.-.-....---....-UCU...GG..A.U.CUUG...CG.CUCCGU


   Structure         ((((............................))))........(((........)))((((((.(((..((..........................................................................................................))..))).......................)))))).....(((((((..(((((..((...........(((..(.((....................................................................................................)).)......)))...........))....).))))....).))))))


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thrU-tyrU-glyT-thrT-tufB-secE-rplK-rplA-rplJ-rplL-rpoB-rpoC-nusG



Position: 4436-4520, Conformation: #0







97% 90% 75% 50% Nucleotide present N N N Nucleotide identify E < 0.1 Base-pair covariation E < 0.05 Helix-level covariation 97% 90% 75%

R C C G U C A A G A C C G Y A G G Y G C U U A A U C C U R C G Y A G A Y G G Y G C R C C R 5'