sraB-rpmF-plsX-fabH-fabD-fabG-acpP-fabF-yceD



Position: 6313-6462, Conformation: #0







DMS reactivity > 1.0 0.0 0.4 0.7 G/U/No data
Position: 0 (position.label in template: 0.5')5' Position: 1 (position.label in template: 1.A) Reactivity: nanA Position: 2 (position.label in template: 2.A) Reactivity: nanA Position: 3 (position.label in template: 3.G) Reactivity: nanG Position: 4 (position.label in template: 4.C) Reactivity: nanC Position: 5 (position.label in template: 5.G) Reactivity: nanG Position: 6 (position.label in template: 6.C) Reactivity: nanC Position: 7 (position.label in template: 7.A) Reactivity: nanA Position: 8 (position.label in template: 8.G) Reactivity: nanG Position: 9 (position.label in template: 9.G) Reactivity: nanG Position: 10 (position.label in template: 10.C) Reactivity: nanC Position: 11 (position.label in template: 11.G) Reactivity: nanG Position: 12 (position.label in template: 12.G) Reactivity: nanG Position: 13 (position.label in template: 13.U) Reactivity: nanU Position: 14 (position.label in template: 14.G) Reactivity: nanG Position: 15 (position.label in template: 15.A) Reactivity: nanA Position: 16 (position.label in template: 16.A) Reactivity: nanA Position: 17 (position.label in template: 17.A) Reactivity: nanA Position: 18 (position.label in template: 18.A) Reactivity: nanA Position: 19 (position.label in template: 19.C) Reactivity: nanC Position: 20 (position.label in template: 20.C) Reactivity: nanC Position: 21 (position.label in template: 21.A) Reactivity: nanA Position: 22 (position.label in template: 22.U) Reactivity: nanU Position: 23 (position.label in template: 23.C) Reactivity: nanC Position: 24 (position.label in template: 24.U) Reactivity: nanU Position: 25 (position.label in template: 25.U) Reactivity: nanU Position: 26 (position.label in template: 26.C) Reactivity: nanC Position: 27 (position.label in template: 27.G) Reactivity: nanG Position: 28 (position.label in template: 28.G) Reactivity: nanG Position: 29 (position.label in template: 29.U) Reactivity: nanU Position: 30 (position.label in template: 30.G) Reactivity: nanG Position: 31 (position.label in template: 31.A) Reactivity: nanA Position: 32 (position.label in template: 32.A) Reactivity: nanA Position: 33 (position.label in template: 33.G) Reactivity: nanG Position: 34 (position.label in template: 34.C) Reactivity: nanC Position: 35 (position.label in template: 35.U) Reactivity: nanU Position: 36 (position.label in template: 36.G) Reactivity: nanG Position: 37 (position.label in template: 37.C) Reactivity: 0C Position: 38 (position.label in template: 38.A) Reactivity: 1A Position: 39 (position.label in template: 39.A) Reactivity: 1A Position: 40 (position.label in template: 40.G) Reactivity: nanG Position: 41 (position.label in template: 41.C) Reactivity: 0C Position: 42 (position.label in template: 42.C) Reactivity: 0C Position: 43 (position.label in template: 43.G) Reactivity: nanG Position: 44 (position.label in template: 44.U) Reactivity: nanU Position: 45 (position.label in template: 45.G) Reactivity: nanG Position: 46 (position.label in template: 46.U) Reactivity: nanU Position: 47 (position.label in template: 47.G) Reactivity: nanG Position: 48 (position.label in template: 48.U) Reactivity: nanU Position: 49 (position.label in template: 49.U) Reactivity: nanU Position: 50 (position.label in template: 50.G) Reactivity: nanG Position: 51 (position.label in template: 51.G) Reactivity: nanG Position: 52 (position.label in template: 52.U) Reactivity: nanU Position: 53 (position.label in template: 53.A) Reactivity: 1A Position: 54 (position.label in template: 54.A) Reactivity: 1A Position: 55 (position.label in template: 55.G) Reactivity: nanG Position: 56 (position.label in template: 56.C) Reactivity: 1C Position: 57 (position.label in template: 57.U) Reactivity: nanU Position: 58 (position.label in template: 58.C) Reactivity: 0.5C Position: 59 (position.label in template: 59.C) Reactivity: 0.5C Position: 60 (position.label in template: 60.A) Reactivity: 1A Position: 61 (position.label in template: 61.C) Reactivity: 0C Position: 62 (position.label in template: 62.G) Reactivity: nanG Position: 63 (position.label in template: 63.A) Reactivity: 0A Position: 64 (position.label in template: 64.A) Reactivity: 0A Position: 65 (position.label in template: 65.A) Reactivity: 0.5A Position: 66 (position.label in template: 66.U) Reactivity: nanU Position: 67 (position.label in template: 67.C) Reactivity: 0.5C Position: 68 (position.label in template: 68.U) Reactivity: nanU Position: 69 (position.label in template: 69.A) Reactivity: 0.5A Position: 70 (position.label in template: 70.U) Reactivity: nanU Position: 71 (position.label in template: 71.G) Reactivity: nanG Position: 72 (position.label in template: 72.A) Reactivity: 1A Position: 73 (position.label in template: 73.C) Reactivity: 1C Position: 74 (position.label in template: 74.C) Reactivity: 0C Position: 75 (position.label in template: 75.G) Reactivity: nanG Position: 76 (position.label in template: 76.G) Reactivity: nanG Position: 77 (position.label in template: 77.U) Reactivity: nanU Position: 78 (position.label in template: 78.C) Reactivity: 0C Position: 79 (position.label in template: 79.A) Reactivity: 0A Position: 80 (position.label in template: 80.C) Reactivity: 0C Position: 81 (position.label in template: 81.C) Reactivity: 0C Position: 82 (position.label in template: 82.U) Reactivity: nanU Position: 83 (position.label in template: 83.G) Reactivity: nanG Position: 84 (position.label in template: 84.U) Reactivity: nanU Position: 85 (position.label in template: 85.U) Reactivity: nanU Position: 86 (position.label in template: 86.A) Reactivity: 1A Position: 87 (position.label in template: 87.G) Reactivity: nanG Position: 88 (position.label in template: 88.G) Reactivity: nanG Position: 89 (position.label in template: 89.U) Reactivity: nanU Position: 90 (position.label in template: 90.G) Reactivity: nanG Position: 91 (position.label in template: 91.C) Reactivity: 0C Position: 92 (position.label in template: 92.G) Reactivity: nanG Position: 93 (position.label in template: 93.G) Reactivity: nanG Position: 94 (position.label in template: 94.C) Reactivity: 0C Position: 95 (position.label in template: 95.G) Reactivity: nanG Position: 96 (position.label in template: 96.G) Reactivity: nanG Position: 97 (position.label in template: 97.G) Reactivity: nanG Position: 98 (position.label in template: 98.U) Reactivity: nanU Position: 99 (position.label in template: 99.G) Reactivity: nanG Position: 100 (position.label in template: 100.C) Reactivity: 1C Position: 101 (position.label in template: 101.A) Reactivity: 0A Position: 102 (position.label in template: 102.G) Reactivity: nanG Position: 103 (position.label in template: 103.U) Reactivity: nanU Position: 104 (position.label in template: 104.A) Reactivity: 0A Position: 105 (position.label in template: 105.G) Reactivity: nanG Position: 106 (position.label in template: 106.A) Reactivity: 0.5A Position: 107 (position.label in template: 107.A) Reactivity: 1A Position: 108 (position.label in template: 108.U) Reactivity: nanU Position: 109 (position.label in template: 109.C) Reactivity: 1C Position: 110 (position.label in template: 110.U) Reactivity: nanU Position: 111 (position.label in template: 111.A) Reactivity: 1A Position: 112 (position.label in template: 112.U) Reactivity: nanU Position: 113 (position.label in template: 113.C) Reactivity: 0C Position: 114 (position.label in template: 114.U) Reactivity: nanU Position: 115 (position.label in template: 115.A) Reactivity: 0A Position: 116 (position.label in template: 116.C) Reactivity: 0C Position: 117 (position.label in template: 117.U) Reactivity: nanU Position: 118 (position.label in template: 118.C) Reactivity: 0.5C Position: 119 (position.label in template: 119.C) Reactivity: 0C Position: 120 (position.label in template: 120.A) Reactivity: 0A Position: 121 (position.label in template: 121.U) Reactivity: nanU Position: 122 (position.label in template: 122.C) Reactivity: 0C Position: 123 (position.label in template: 123.C) Reactivity: 0C Position: 124 (position.label in template: 124.U) Reactivity: nanU Position: 125 (position.label in template: 125.G) Reactivity: nanG Position: 126 (position.label in template: 126.G) Reactivity: nanG Position: 127 (position.label in template: 127.C) Reactivity: 0C Position: 128 (position.label in template: 128.G) Reactivity: nanG Position: 129 (position.label in template: 129.C) Reactivity: 0C Position: 130 (position.label in template: 130.U) Reactivity: nanU Position: 131 (position.label in template: 131.G) Reactivity: nanG Position: 132 (position.label in template: 132.C) Reactivity: 0C Position: 133 (position.label in template: 133.G) Reactivity: nanG Position: 134 (position.label in template: 134.C) Reactivity: 0C Position: 135 (position.label in template: 135.G) Reactivity: nanG Position: 136 (position.label in template: 136.A) Reactivity: 0.5A Position: 137 (position.label in template: 137.U) Reactivity: nanU Position: 138 (position.label in template: 138.C) Reactivity: 0C Position: 139 (position.label in template: 139.A) Reactivity: 0A Position: 140 (position.label in template: 140.G) Reactivity: nanG Position: 141 (position.label in template: 141.G) Reactivity: nanG Position: 142 (position.label in template: 142.C) Reactivity: 1C Position: 143 (position.label in template: 143.U) Reactivity: nanU Position: 144 (position.label in template: 144.G) Reactivity: nanG Position: 145 (position.label in template: 145.U) Reactivity: nanU Position: 146 (position.label in template: 146.U) Reactivity: nanU Position: 147 (position.label in template: 147.C) Reactivity: 0C Position: 148 (position.label in template: 148.C) Reactivity: 0C Position: 149 (position.label in template: 149.G) Reactivity: nanG Position: 150 (position.label in template: 150.C) Reactivity: 1C Position: 151 (position.label in template: 151.C) Reactivity: 0C Position: 152 (position.label in template: 152.A) Reactivity: 0A Position: 153 (position.label in template: 153.A) Reactivity: 0A Position: 154 (position.label in template: 154.C) Reactivity: 0C Position: 155 (position.label in template: 155.C) Reactivity: 0C Position: 156 (position.label in template: 156.A) Reactivity: nanA Position: 157 (position.label in template: 157.U) Reactivity: nanU Position: 158 (position.label in template: 158.C) Reactivity: nanC Position: 159 (position.label in template: 159.A) Reactivity: nanA Position: 160 (position.label in template: 160.A) Reactivity: nanA Position: 161 (position.label in template: 161.C) Reactivity: nanC Position: 162 (position.label in template: 162.C) Reactivity: nanC Position: 163 (position.label in template: 163.U) Reactivity: nanU Position: 164 (position.label in template: 164.G) Reactivity: nanG Position: 165 (position.label in template: 165.G) Reactivity: nanG Position: 166 (position.label in template: 166.A) Reactivity: nanA Position: 167 (position.label in template: 167.U) Reactivity: nanU Position: 168 (position.label in template: 168.A) Reactivity: nanA Position: 169 (position.label in template: 169.A) Reactivity: nanA Position: 170 (position.label in template: 170.C) Reactivity: nanC Position: 171 (position.label in template: 171.C) Reactivity: nanC Position: 172 (position.label in template: 172.C) Reactivity: nanC Position: 173 (position.label in template: 173.G) Reactivity: nanG Position: 174 (position.label in template: 174.G) Reactivity: nanG Position: 175 (position.label in template: 175.A) Reactivity: nanA Position: 176 (position.label in template: 176.U) Reactivity: nanU Position: 177 (position.label in template: 177.G) Reactivity: nanG Position: 178 (position.label in template: 178.A) Reactivity: nanA Position: 179 (position.label in template: 179.A) Reactivity: nanA Position: 180 (position.label in template: 180.G) Reactivity: nanG Position: 181 (position.label in template: 181.G) Reactivity: nanG Position: 182 (position.label in template: 182.U) Reactivity: nanU Position: 183 (position.label in template: 183.U) Reactivity: nanU Position: 184 (position.label in template: 184.G) Reactivity: nanG Position: 185 (position.label in template: 185.C) Reactivity: nanC Position: 186 (position.label in template: 186.G) Reactivity: nanG Position: 187 (position.label in template: 187.A) Reactivity: nanA Position: 188 (position.label in template: 188.U) Reactivity: nanU Position: 189 (position.label in template: 189.C) Reactivity: nanC Position: 190 (position.label in template: 190.U) Reactivity: nanU Position: 191 (position.label in template: 191.3')3' 10 20 30 50 100 150


sraB-rpmF-plsX-fabH-fabD-fabG-acpP-fabF-yceD



Position: 6313-6462, Conformation: #0







Retained alignments:


   NC_002932.3       -.-..-.-.-.-........-.-.-.--...-..-..-.-..--.G..A..UC..U..G.G..........................................................C.G.G...AA.A......-.-..-.--...-..-..--.-.-..-....----ucaaggcaaucaagaagguguucg........gcgagcacgcaucaaaacucagcau...--...-..-C.....AG...C..UCGA...CCAAGUCGAUGACCGGUCACCUGCUU...................GG...UG.C.G....G..C..GG.....G...C..G...U.GGUCGA....AUC..GA............................................................U..C..G..CCU..G..C.A....U..C..C.U.U.G....CG...C..UG..C..A..G...A.........A.C.......CAG.....A.......C..C..G.UU...C.CU.C..CAACC...A.UC.A...A.CC.U...CG.AC.A.A................................................UG.U.....CG..A......Uc.cC..G..A......G.A..U....CG.....A..-
   NC_003910.7       A.C..U.A.A.U........G.C.G.GU...U..A..A.G..AC.U..G..UA..U..U.U..........................................................G.G.U...GC.U......G.G..U.GC...A..A..AG.A.A..U....GUAA............................................................UG...A..UG.....GG...U..UCUA...CCAAGUCUAUGACUGGACAUUUGUUA...................GG...CG.C.U....G..C..AG.....G...A..G...C.UAUUGA....AGC..UA............................................................U..U..U..UCA..G..U.A....U..C..C.A.A.G....-C...A..CU..A..G..U...G.........A.A.......UAA.....G.......C.aA..G.UU...C.CA.C..CGACG...A.UA.A...A.UU.U...AG.AU.A.A................................................CC.C.....UG..A......U...G..A..A......G.G..U....UG.....U..G
   NC_003911.12      G.C..G.G.C.U........G.U.U.GG...G..C..A.A..--.-..-..--..-..-.-cc...................................................au...-.-.-...--.-......G.C..G.GC...C..A..AU.G.-..-....----uc.....................................................ac...-C...A..UG.....UC...C..UCGA...CCAAAUCGGCCACCGGGCACCUGUUG...................GG...CG.C.U....G..C..CG.....G...C..G...C.GAUCGA....GGC..GA............................................................U..C..U..UUU..C..G.A....U..C..C.U.G.G....CG...A..UC..C..G..C...G.........A.U.......CAG.....G.......U..G..G.CC...C.CG.C..CAACC...A.UC.A...A.CC.U...GG.AC.A.A................................................CC.C.....GG..Ca...guU...G..A..Gac.cccG.G..U....--.....C..G
   NC_004347.2       G.C..G.G.C.G........G.C.G.GU...U..A..A.G..UC.G..G..UC..U..U.U..........................................................G.G.U...GA.U......C.A..C.GC...U..U..AU.A.A..U....CUGC............................................................UU...G..UG.....AG...U..UCGA...CUAAGUCGAUGACGGGUCACCUAUUA...................GG...UG.C.U....G..C..GG.....G...C..G...C.GGUGGA....GGC..GA............................................................U..U..U..UCA..C..U.U....U..A..U.U.G.G....CA...C..UA..C..G..U...G.........A.C.......CAA.....G.......C..G..G.UA...C.CA.C..CGACC...A.UU.A...A.CC.U...CG.AU.A.A................................................UC.C.....UG..A......C...G..A..A......G.G..G....UG.....U..G
   NC_004556.1       -.-..C.C.A.A.......cG.C.G.AU...C..A..A.G..AC.G..G..UA..U..U.A..........................................................G.G.A...GG.U......C.A..U.GC...C..U..AC.A.A..A....GUGA............................................................UG...G..UU.....AG...C..UCGA...CCAAAUCAAUGACCGGACAUCUACUC...................GG...UG.C.G....G..C..CG.....G...U..G...G.UGUGGA....AGC..AA............................................................U..U..U..UCU..C..A.G....U..G..A.U.G.G....CG...U..UG..C..A..U...A.........C.U.......GGC.....A.......U..C..G.UU...C.CG.C..CGACG...A.UU.A...AuCU.C...GA.AG.A.A................................................-C.C.....AG..A......C...G..A..A......G.G..C....UG.....U..G
   NC_004578.1       -.-..-.-.-.U........G.C.G.AU...C..A..A.G..UC.G..G..UG..U..U.C..........................................................G.G.C...GA.U......C.A..C.GC...C..U..AC.A.A..G....CUGG............................................................CG...G..UC.....AG...C..UCGA...CCAAGUCGAUGACCGGCCACUUGCUG...................GG...GGcU.G....C..C..GG.....-...U..G...C.GGUCGA....GGC..AA............................................................U..U..U..UCA..G..C.G....U..G..C.U.G.G....CA...A..UG..G..U..U...G.........A.U.......CAG.....G.......U..G..G.CU...C.CG.C..CGACC...A.UC.A...A.UC.U...GG.AU.G.A................................................AC.C.....GA..G......C...G..A..A......G.G..C....UG.....C..G
   NC_004603.1       A.A..U.C.A.A.......gG.G.U.GU...G..A..A.A..--.-..-..--..-..-.-cgugcucu......................................uggugaaga...-.-.-...-A.G......G.U..G.CA...A..A..AC.A.A..-....GUUC............................................................UU...G..UU.....UC...U..UCAA...CUAAGUCAAUGACUGGUCACCUAUUG...................GG...UG.C.U....G..C..UG.....G...U..U...C.AGUUGA....AGC..UA............................................................U..C..A..UCA..C..G.A....U..U..A.U.G.U....CU...U..UG..G..U..U...G.........A.C.......CAA.....A.......U..U..G.UU...C.CA.C..CAACG...A.UU.A...A.CC.U...UG.AU.G.A................................................UC.C.....AG..A......A...G..A..A......G.G..U....CU.....A..G
   NC_005125.1       A.C..C.C.A.G........G.C.G.AU...U..A..A.G..AC.C..G..UG..C..U.G..........................................................G.G.A...GA.G......G.C..U.GC...C..U..AC.A.G..C....GUGG............................................................CG...G..UC.....AG...U..UCCA...CCAAAUCGAUGACCGGUCACCUGCUG...................GG...CG.G.A....U..C..CG.....G...G..G...G.CAUCG-....---..--a......................................................gg...-..C..G..GUG..G..C.C....A..C..-.-.G.G....CU...C..UG..G..C..U...G.........U.U.......UAC.....-.......-..-..-.--...-.--.-..-----...-.--.-...-.--.-...--.--.-.-cacgacaucgcgccgcccaccaucaaccuugagacccccgacccg...--.-.....--..-......-...-..-..-......-.-..-....--.....-..-
   NC_005126.1       G.C..G.C.A.U........G.C.A.GU...U..G..A.G..UC.C..G..UG..U..U.U..........................................................G.G.U...GA.A......G.-..-.GC...-..-..AC.U.G.aU....GUUU............................................................UA...G..UG.....AG...C..UCCA...CUAAAUCAAUGACGGGUCAUUUGUUG...................GG...CG.C.U....G..C..GG.....G...G..G...C.CGUUGA....AUC..UA............................................................U..U..U..UCA..C..U.A....U..C..C.U.G.G....CA...U..UG..C..G..U...G.........A.U.......CAA.....G.......U..U..G.UU...C.CG.C..CGACU...A.UC.A...A.CC.U...GG.AA.A.A................................................UC.A.....GG..A......U...G..A..G......A.A..C....UG.....C..C
   NC_006513.1       -.-..-.-.-.-........-.-.-.--...-..A..A.A..GCgC..U..GU..U..U.C..........................................................G.G.C...GA.U......C.G..G.GC...A..A.gAU.C.G..A....UCG-............................................................UG...G..UG.....AA...C..UCCA...CCAAGUCGAUGACCGGCCAUCUGCUC...................GG...CG.C.C....G..C..GG.....G...A..G...G.UGUCGA....AGC..GG............................................................U..G..U..UCA..C..C.G....C..G..C.U.G.G....CC...C..UG..C..A..C...A.........A.C.......CAG.....A.......U..C..G.CU...C.CG.C..CGACG...A.UC.A...A.CA.U...UU.UC.G.A................................................GC.A.....GG..A......C...G..A..G......C.G..G....UG.....C..G
   NC_007481.1       A.C..C.U.C.G........G.C.C.GU...U..A..A.A..AG.U..G..UU..U..U.U..........................................................G.G.C...AG.U......G.C..A.GC...A..A..AA.G.A..C....GUAA............................................................UG...G..UG.....AG...U..UCAU...CUAAAUCUAUGAUGGGUCACUUAUUA...................GG...UG.C.U....G..C..UG.....G...U..U...C.GGUUGA....GUC..GA............................................................U..U..A..UUU..C..A.A....U..A..U.U.G.U....CG...U..UA..A..C..C...G.........A.U.......CAA.....A.......A..A..G.UU...A.CC.C..CAACA...A.UU.A...A.UC.U...UG.AU.A.A................................................CC.C.....AG..A......U...G..A..A......G.G..G....UG.....C..G
   NC_007626.1       -.-..-.-.-.-........-.-.-.--...-..-..-.-..--.-..-..--..-..-.-..........................................................-.-.-...--.-......-.-..-.-C...A..A..G-.-.-..-....----cagguguucggcgacca.......................cgccuacaagcugucca...--...-..UG.....UC...G..UCCA...CCAAGUCGGCCAUCGGCCACCUGUUG...................GG...CG.C.C....G..C..GG.....G...C..G...C.GGUGGA....AGC..CA............................................................U..C..U..ACU..C..U.C....U..G..C.U.G.G....CC...A..UC..C..G..C...G.........A.U.......CAG.....G.......U..C..G.CG...C.CG.C..CGACC...C.UC.A...A.UC.U...GC.AU.A.A................................................UC.C.....GG..A......U...G..A..G......G.G..C....UG.....C..G
   NC_007712.1       A.C..C.C.A.G........G.C.G.GU...G..A..A.G..GC.G..G..UC..U..U.-..........................................................C.G.C...CG.A......G.C.aU.GC...G..G..GC.A.A..A....GUGA............................................................UG...G..UA.....AG...U..UCGA...CGAAAUCGAUGACAGGUCAUCUGCUU...................GG...GG.C.G....G..C..CG.....G...C..G...C.UAUCGA....GGC..GA............................................................U..C..U..UCA..G..C.G....U..G..U.U.G.G....CG...U..UG..C..G..C...G.........A.U.......CAG.....G.......C..G..A.UU...C.CA.C..CGACC...A.UC.A...A.CC.U...GG.AU.A.A................................................CC.C.....CG..A......C...G..A..G......G.G..C....UG.....C..G
   NC_007794.1       G.C..G.C.G.U........G.C.U.GG...G..C..G.A..--.-..-..--..-..-.-cgac...............................................cuuu...-.-.-...--.-......C.C..G.GC...G..C..UU.C.G..A....----............................................................U-...-..-G.....AG...C..AGUA...CCAAGUCUGCCAUUGGCCACCUUCUU...................GG...CG.G.U....G..C..CG.....G...C..G...C.GGUCGA....GAC..GA............................................................U..C..U..UCU..G..C.A....U..C..C.U.G.G....CG...A..UC..C..G..C...G.........A.C.......CAG.....A.......U..C..G.UG...C.CG.C..CGACG...C.UC.A...A.CC.U...GC.AC.A.A................................................UC.C.....GG..A......C...G..A..A......G.G..C....AC.....C..G
   NC_007912.1       -.-..-.A.A.A........G.C.G.CU...U..A..A.A..AA.U..G..UA..U..U.U..........................................................-.-.G...GA.A......G.C..C.AC...G..C..AC.C.U..-....----aau..................................................cuug...CG...G..UU.....AG...C..UCAA...CCAAAUCUAUGAUUGGUCACUUACUG...................GG...UGcC.G....C..C..GG.....-...C..G...C.CGUAGA....AGC..UA............................................................U..U..U..UUA..C..U.G....U..G..C.U.A.G....CU...A..UU..C..G..C...G.........A.U.......CAA.....G.......U..G..G.CA...C.CG.C..CAACC...A.UU.A...A.UU.U...GG.AU.A.A................................................CC.C.....AG..A......C...G..A..A......G.G..U....UG.....U..G
   NC_007954.1       G.C..-.-.-.G........G.C.G.GC...A..G..U.U..AA.A..G..CC..G..U.G..........................................................U.U.U...GA.A......G.C..-.GC...A..U..GC.C.U.aU....AAGU.........................................................uauUG...G..UG.....AG...U..UCGA...CUAAAUCGAUGACAGGUCACCUAUUA...................GG...UG.C.A....G..C..AG.....G...U..G...C.CGUUGA....AGC..GA............................................................U..U..A..UCA..C..U.U....U..G..C.U.G.G....CA...U..UG..A..G..G...G.........A.U.......CAA.....C.......A..G..G.UC...C.CG.C..CCACC...A.UC.A...A.UU.U...GG.AC.A.A................................................CC.C.....AG..A......U...G..A..A......G.G..C....UG.....C..G
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   NZ_LR861803.1     -.-..-.-.-.-........-.-.-.--...-..-..-.-..--.-..-..--..-..-.-..........................................................-.-.-...G-.A......A.G..C.GC...G..C..GC.U.G..-....----ggcgaccacgc...................................cuacaagacca...UG...G..UC.....AG...C..UCGA...CCAAGUCGAUGACCGGCCAUCUGCUC...................GG...UG.C.G....G..C..UG.....G...C..G...G.CGUGGA....AGC..GA............................................................U..C..U..UCU..C..G.G....U..G..A.U.G.G....CG...C..UG..C..A..C...A.........C.C.......GGC.....A.......U..C..A.UU...C.CG.C..CGACC...A.UC.A...A.CC.U...GG.AAgA.G................................................CC.C.....AG..-......C...G..A..A......G.G..C....UG.....C..G
   NZ_LR990739.1     A.C..G.C.U.G........G.C.G.AU...G..A..A.G..CG.C..G..CA..U..U.G..........................................................G.G.C...GA.C......C.A..C.GC...C..U..AC.A.A..G....ACCA............................................................UG...G..UC.....AG...C..UCGA...CCAAGUCGAUGACCGGUCAUCUGCUC...................GG...CG.C.G....G..C..CG.....G...C..G...G.CGUGGA....AGC..GA............................................................U..C..U..UCU..C..G.G....U..G..A.U.G.G....CG...C..UG..C..A..U...A.........C.C.......GGC.....A.......U..C..A.UU...C.CG.C..CGACC...A.UC.A...A.UC.U...GG.AA.G.A................................................GC.C.....CA..G......C...G..A..A......G.G..C....UG.....C..G
   NZ_LS398110.1     U.C..G.C.U.G........C.C.A.UC...-..A..A.A..UC.C..G..UU..U..U.C..........................................................G.G.A...GC.U......-.-..-.GA...C..G..GC.G.G..C....AUCG............................................................CC...G..UG.....AG...C..GCUA...CGAAGUCGGCAACCGGUCACUUGCUC...................GG...UG.C.U....G..C..AG.....G...G..G...C.GCGGAG....G-C..CA............................................................U..C..U..UCG..C..G.A....U..A..C.U.C.G....CG...C..UA..C..G..A...G.........A.C.......CAG.....A.......U..A..G.CC...C.CG.C..CCACC...C.UG.A...A.CC.U...GG.AA.A.A................................................UC.C.....CG..A......-...C..G..A......U.G..C....CG.....C..G
   NZ_LS483250.1     -.-..-.-.-.-........-.-.-.--...-..A..A.A..UC.U..G..UA..U..U.U..........................................................G.G.C...GA.G......C.A..C.GC...U..U..AU.A.A..A....CUUG............................................................CU...G..UU.....AG...U..UCCA...CAAAAUCAAUGACAGGGCAUCUUUUA...................GG...UG.C.C....G..C..UG.....G...U..G...C.AAUCGA....GGC..UA............................................................U..U..U..-UU..A..C.A....A..U..C.UuA.G....CU...U..UA..A..G..A...G.........A.U.......CAG.....A.......U..C..U.UA...C.CG.C..CAACG...A.UC.A...A.CU.U...GG.AA.A.A................................................CC.C.....GA..G......U...G..A..A......G.G..U....UG.....U..G
   NZ_LS483369.1     -.-..-.-.-.-........-.-.-.--...-..C..A.A..GCgC..G..CG..C..U.A..........................................................G.G.C...GA.C......C.A..C.GC...C..C..GC.A.A..A....GUUA............................................................UC...G..UC.....AA...C..UCCA...CCAAAUCCAUGACCGGCCACCUGCUC...................GG...CG.C.G....G..C..AG.....G...C..G...G.UGUAGA....AGC..GU............................................................U..G..U..ACA..G..C.G....U..G..U.U.G.G....CG...G..UA..C..A..C...G.........A.G.......CAA.....A.......A..A..U.CC...C.CG.C..CGACC...A.UC.A...A.C-.-...--.--.-.-aucuuugaa...........................caagacauc...--.-.....-G..A......A...G..C..G......G.G..U....UG.....C..G
   NZ_LS483377.1     -.-..-.C.AuG........G.C.G.AU...G..A..A.G..AC.C..G..CC..U..U.C..........................................................G.G.C...GA.C......C.A..C.GC...C..U..AC.A.A..G....AUGA............................................................UG...G..UC.....AG...C..UCCA...CCAAGUCGAUGACCGGCCACCUGCUG...................GG...CG.C.U....G..C..CG.....G...C..G...G.CGUGGA....AGC..GA............................................................U..C..U..UCU..C..G.G....U..G..A.U.G.G....CG...C..UG..C..A..G...G.........A.C.......AAC.....G.......U..C..A.UU...C.CG.C..CGACC...A.UC.A...A.CC.U...GG.AA.C.A................................................GC.C.....GG..G......C...G..A..A......G.G..U....UG.....U..G
   NZ_LS483422.1     G.C..U.C.A.A........G.C.C.GU...U..G..U.C..UC.U..G..UA..U..U.U..........................................................G.G.U...GA.A......G.-..-.--...A..U..AC.U.G.aU....GUUU............................................................UA...G..UC.....AG...U..UCAA...CGAAAUCAAUGACAGGGCAUUUACUC...................GG...UG.C.U....G..C..GG.....G...U..G...C.AGUUGA....AUC..UA............................................................U..C..U..UCA..C..A.A....U..U..U.U.A.U....CA...U..UG..U..G..U...G.........A.U.......CAG.....G.......U..C..G.UC...C.CG.C..CAACC...A.UU.A...A.UU.U...GG.AA.A.A................................................UC.A.....AG..A......U...G..A..A......G.C..U....UG.....C..A
   NZ_LS483423.1     G.C..G.C.G.C........G.C.A.AU...U..C..G.U..AC.U..C..UU..C..U.C..........................................................G.G.U...GA.C......A.C..U.GC...A..G..AC.C.A..G....GUGA............................................................AG...C..UC.....UC...U..GCGA...CGAAGUCGCUCACUGGUCACCUGCUU...................GG...GG.G.U....G..C..UG.....G...C..G...C.CUUGGA....GAC..AA............................................................U..C..U..UCU..C..C.A....U..C..U.U.G.G....CU...G..UG..C..G..C...G.........A.C.......CGU.....G.......U..C..G.CA...C.CC.C..CCACG...A.UC.A...A.CG.U...GG.A-.-.-gaacccagaccca..................gaacucaccuugga...CC.-.....UG..-......-...-..-..-......-.-..-....--.....-..-
   NZ_LS483470.1     G.C..U.C.A.G........G.C.A.GU...U..A..A.A..AG.C..A..UU..U..U.U..........................................................A.A.A...GA.A......G.A..U.GC...U..A..AA.C.G..C....GUGA............................................................UG...G..UG.....AG...C..UCAA...CUAAGUCCAUGACGGGUCACCUUCUG...................GG...CG.C.U....G..C..UG.....G...U..G...C.GGUAGA....GUC..UA............................................................U..U..U..UCU..C..U.A....U..C..C.U.U.G....CG...C..UG..C..G..C...G.........A.U.......CAG.....G.......C..U..A.UU...C.CA.C..CUACG...A.UC.A...A.UC.U...GG.AU.A.A................................................UC.C.....UG..A......C...G..A..A......G.G..C....UG.....C..G
   NZ_LS999205.1     G.C..C.G.A.A........G.C.G.AU...C..A..A.G..AG.C..G..UG..U..U.C..........................................................G.G.C...GA.U......C.A..C.GC...C..U..AC.A.A..G....CUGG............................................................CG...G..UC.....AG...U..UCCA...CCAAGUCCAUGACGGGUCACCUGCUG...................GG...UG.C.C....G..C..GG.....G...G..G...C.GAUCGA....G--..--gcgau..............................................cuucag...-..-..-..---..-..U.G....U..G..C.U.G.G....CA...A..UC..A..A..C...A.........G.C.......CAG.....G.......C..C..G.CG...C.CG.C..CCACC...A.UC.A...A.CC.U...GG.AU.G.A................................................GC.C.....GG..A......U...G..A..A......G.G..C....UG.....C..G
   NZ_LT593929.1     G.C..G.C.A.C........G.G.G.AU...U..C..G.U..UC.C..C..UG..C..U.C..........................................................G.G.U...GA.C......G.A..C.GC...C..G..AC.C.A..U....GUGG............................................................UG...G..UC.....AC...C..AGCA...CCAAGUCGAUGACCGGGCACCUGCUC...................GG...CGcC.G....C..C..GG.....-...-..-...-.------....---..--ggcguuggaga..................................cgauggccacgg...-..-..-..---..-..-.-....U..G..C.U.G.G....CA...C..UG..C..G..U...G.........A.C.......CGG.....G.......U..G..U.CG...C.CC.C..CGACG...A.UC.A...A.CC.U...CG.AU.G.A................................................UC.C.....GG..A......G...G..A..C......G.A..U....CU.....G..-
   NZ_LT615367.1     A.C..G.C.A.G........G.C.G.GU...G..A..A.G..UC.G..G..UG..U..U.C..........................................................G.G.U...GC.U......G.A..U.GC...C..U..CU.C.G..C....GUGA............................................................UG...G..UC.....AG...C..UCCA...CCAAAUCCAUGACCGGCCACCUGUUA...................GG...UG.C.G....G..C..GG.....G...U..G...C.GAUAGA....GUC..GA............................................................U..U..U..UCA..G..U.A....U..U..U.U.G.G....CA...U..UG..C..G..U...G.........A.U.......AAC.....G.......C..C..G.UU...C.CG.C..CGACG...A.UU.A...A.UC.U...GG.AU.A.A................................................CC.C.....GG..A......U...G..A..G......G.G..A....UG.....U..G
   NZ_LT853882.1     G.C..G.C.G.C........G.C.U.--...-..-..-.G..GG.C..G..AC..C..A.C..........................................................G.C.C...UA.C......-.-..-.-A...A..G..GC.C.A..-....----............................................................UG...G..UC.....AG...U..UCGA...CCAAGUCGAUGACCGGUCACCUGCUC...................GG...CG.C.A....G..C..CG.....G...U..G...G.CGUGGA....AGC..GA............................................................U..C..U..UCU..C..G.G....U..-..-.-.G.A....UG...G..CG..C.uG..C...A.........C.A.......CCG.....G.......C..AucA.UC...C.CG.C..CGACC...A.UC.A...A.CC.U...GG.AAgA.A................................................CC.C.....AG..-......C...G..A..A......G.G..C....UG.....C..G
   NZ_LT855380.1     -.-..-.-.-.-........G.C.G.AU...C..A..A.G..AG.U..G..UG..U..U.C..........................................................G.G.C...GA.C......C.A..U.GC...C..U..AC.A.A..G....CUUG............................................................CG...G..UC.....AG...C..UCCA...CCAAGUCGAUGACAGGCCACCUUCUG...................GG...UG.C.U....G..C..CG.....G...U..G...C.UGUCGA....AGC..CA............................................................U..C..U..UCA..G..U.G....U..G..C.U.G.G....CG...C..UG..G..U..U...G.........A.U.......CAG.....G.......U..C..G.CG...C.CG.C..CGACC...A.UC.A...A.CC.U...GG.AC.G.A................................................GC.C.....GA..G......C...G..A..A......G.G..C....UG.....U..G
   NZ_LT897836.1     A.C..U.A.A.A........G.C.G.GU...-..A..A.A..AG.C..A.gUA..U..U.C..........................................................G.C.U...GA.G......U.C..U.GC...C..A..GC.A.A..A....GUUA............................................................UG...U..UA.....AG...C..UCCA...CGAAGUCAAUGACGGGUCAUUUACUA...................GG...AGcU.G....C..C..GG.....-...C..G...C.UAUCGA....AGC..UA............................................................U..C..U..UCA..G..C.G....U..A..U.U.G.G....CA...U..UG..C..G..C...G.........A.U.......CAA.....G.......U..G..A.UU...C.CA.C..CAACC...A.UU.A...A.CU.U...AG.AU.C.A................................................UC.C.....UG..A......U...A..C..A......G.G..A....UG.....C..G
   NZ_LT906434.1     A.C..C.A.A.C........G.C.C.UU...G..A..A.A..-C.U..G..GC..U..C.U..........................................................G.GgC...GA.C......C.A..U.GC...C..U..AC.A.A..A....GUGG............................................................UG...G..UG.....AA...C..UCCA...CCAAGUCGAUGACCGGCCACUUGCUG...................GG...UG.C.G....G..C..AG.....G...C..G...G.CGUGGA....AGC..GG............................................................U..G..U..ACA..G..C.G....U..G..U.U.G.G....CG...G..UG..C..A..C...A.........A.C.......CAA.....A.......A..A..U.CU...C.CG.C..CAACC...A.UC.A...A.UA.U...--.--.-.-uuucg..................................agcaag...--.A.....UG..U......U...G..A..Au...caG.G..C....UG.....C..G
   NZ_LT906442.1     U.U..G.A.A.U........G.A.A.AC...A..A..A.A..GC.U..A..UA..A..-.-..........................................................A.G.C...GU.G......U.A..U.UU...G..A..G-.-.-..-....----aaucaugccua...................................ugauuuggcug...--...-..UA.....AG...C..UCAA...CAAAAUCGAUGACAGGGCAUCUUUUA...................GG...CG.C.U....G..C..GG.....G...A..G...C.UGUGGA....AGC..UA............................................................U..A..U..UUA..G..C.A....U..U..U.U.G.G....CA...A..UU..C..G..A...G.........A.U.......CAA.....A.......U..U..G.CU...C.CA.C..CAACA...A.UU.A...A.UC.U...UG.AU.A.A................................................UC.C.....AG..A......U...G..A..A......G.G..A....UG.....U..G
   NZ_LT906444.1     A.C..A.C.A.A........G.C.A.AU...C..A..A.A..AC.U..G..UA..U..U.U..........................................................G.G.U...GA.A......C.A..U.GC...G..A..AG.A.A..A....UUAG............................................................CC...A..UC.....AG...U..UCUA...CUAAAUCAAUGACAGGACAUACUUUA...................GG...UG.C.G....U..C..CG.....G...-..-...-.------....---..--uggaauugaag..................................cuauuuucgcuc...-..-..-..---..-..-.-....U..U..U.U.A.A....CU...A..UU..C..G..U...G.........A.U.......AAU.....G.......U..U..A.UU...G.CA.C..CAACU...A.UU.C...A.UU.U...GA.AA.A.A................................................CC.A.....AG..A......U...G..A..A......G.U..U....UG.....U..G
   NZ_LT906447.1     G.U..A.U.U.G........G.C.A.AU...C..A..A.A..AA.U..A..CU..U..U.C..........................................................G.G.U...GA.G......G.C..U.GC...A..A..AC.A.A..C....UUGA............................................................AA...G..UC.....AG...C..UCAA...CUAAAUCUAUGACAGGUCAUUUAUUA...................GG...GG.C.-....-..-..--.....-...-..-...-.------....---..--uacaggugguuuggaagcua................ucuucucagcacuuucaauuc...-..-..-..---..-..-.-....-..-..-.-.-.-....-G...C..G-..-..A..C...A.........G.U.......AAA.....G.......U..U..G.CA...C.CG.A..CAA--...-.UU.C...A.UG.C...GG.-U.A.A................................................CU.C.....CA..Gau..ccG...-..-..-......G.A..A....UG.....C..G
   NZ_LT906451.1     A.C..A.A.A.A........G.C.A.GU...A..A..A.G..CG.A..C..UC..U..U.C..........................................................A.A.G...GA.A......C.A..U.GC...C..U..AU.G.A..G....CUUG............................................................CU...A..UU.....AG...U..UCGA...CAAAGUCCAUGACAGGACAUUUAUUA...................GG...UG.C.U....G..C..UG.....G...U..G...C.UGUUGA....GGC..UA............................................................U..U..U..UCA..G..C.G....U..G..C.U.U.G....CU...A..UU..A..A..A...G.........A.U.......CAA.....A.......U..U..G.CU...C.CU.C..CUACG...A.UU.A...A.UC.U...AG.AC.A.A................................................UC.C.....AG..A......U...G..A..A......G.G..C....UG.....U..G
   NZ_LT906453.1     -.-..-.-.-.-........-.-.-.--...-..-..-.-..--.-..-..--..-..A.U..........................................................G.G.C...GC.A......G.A..A.GC...C..A..AA.G.C..U....A---uucgcgcugguuuggguu.....................cccacgccgaccacgcau...GC...U..UG.....AC...C..GCCA...CGAAAUCCAUGACGGGACAUCUGCUU...................GG...UG.C.A....G..C..GG.....G...U..G...C.AUUGGA....GUC..GG............................................................U..U..U..UCA..C..G.A....U..C..C.U.U.A....CG...U..UG..C..G..U...G.........A.U.......CGC.....C.......U..C..G.UG...C.CAgC..CACUC...A.-G.A...A.CU.U...GG.AG.A.A................................................CC.U.....CG..A......U...C..CccA......G.A..U....UG.....-..-
   NZ_LT906479.1     G.C..G.C.A.G........G.C.G.GU...G..A..A.A..UC.G..G..UA..U..U.C..........................................................G.G.C...AG.C......G.A..U.GC...G..C..AA.C.G..C....GUGA............................................................UG...G..UC.....AG...U..UCGA...CCAAAUCGAUGACCGGCCACCUGUUG...................GG...UG.C.G....G..C..GG.....G...C..G...C.GAUUGA....AUC..GA............................................................U..C..U..UCA..C..C.G....U..G..C.U.G.G....CG...C..UG..C..G..C...G.........A.U.......CAG.....G.......C..G..G.UA...C.CG.C..CGACC...A.UC.A...A.CC.U...GG.AU.A.A................................................CC.C.....GG..A......U...G..A..A......G.G..U....UG.....C..G
   NZ_OU015430.1     A.C..G.C.U.G........G.C.G.AU...C..A..A.G..--.-..-..--..-..-.-cgcgcg...........................................cugggc...-.-.-...GA.C......C.A..C.GC...G..U..AC.C.G..G....ACGA............................................................UG...G..UC.....AG...C..UCGA...CCAAGUCGAUGACCGGCCACCUGCUC...................GG...CG.C.G....G..C..CG.....G...C..G...G.UGCCGA....GGC..CA............................................................U..C..U..UCU..C..G.G....U..G..C.U.U.G....CG...C..UG..C..A..C...C.........A.C.......GGC.....G.......U..C..A.UC...C.CG.C..CGACG...A.UC.A...A.CC.U...GG.AGgA.A................................................GC.C.....GG..-......U...G..A..U......G.G..U....UG.....C..G
   NZ_OU015521.1     G.C..A.C.U.A........G.C.U.AU...C..A..A.A..A-.A..A..AC..U..U.U..........................................................U.G.G...GA.A......UcA..U.GC...U..U..AC.G.A..A....UUAG............................................................CU...G..UA.....AG...U..UCUA...CAAAGUCAAUGACUGGUCAUAUGUUA...................GG...GG.C.U....G..C..UG.....G...A..G...C.AGUUGA....AAC..--gguga..............................................uuucag...-..-..-..-U-..-..-.-....U..U..-.-.-.U....AG...U..UA..U..A..Cg.aG.........A.U.......AAC.....G.......U..A..G.CA...C.CG.C..CAACA...A.UU.A...A.UU.U...AG.AA.C.A................................................CU.U.....AG..A......U...A..A..A......G.A..U....UG.....U..G
   NZ_OU594967.1     A.G..C.-.-.-a.....auG.C.G.GU...U..A..A.A..AG.U..G..UC..U..U.U..........................................................G.G.U...GA.U......C.A..U.GC...U..U..AC.C.A..U....UUGU............................................................UG...G..UU.....AG...C..UCAA...CCAAAUCGAUGACCGGGCAUUUAUUA...................GG...UG.C.U....G..-..--.....-...-..-...-.------....---..--ccggagcuguugaagcg......................auugucucgguguuagcu...-..-..-..---..-..-.-....-..-..-.-.-.-....--...C..UU..C..G..A...G.........A.U.......CAA.....A.......U..U..G.CU...C.CA.C..CAACC...A.UU.A...A.UC.U...GG.AU.A.A................................................UC.C.....UG..A......U...G..A..A......G.G..A....UG.....U..G


   Structure         (.(..(.(.(.(........(.(.(.((..............((.(.........................................................................).).).............).)..).)).........((.(.(.......................................................................))...)..)......................................((((........................))...)).(.(.......(..((.....(...(..(.....((((((.......................................................................)..)..)..))).....).).......)..).).)......))...)..))..)..)..)......................................................((....(((((.....((.(.....((.....((.......................................................)).......)).........)...)..).........).)..)....)).....)..)


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sraB-rpmF-plsX-fabH-fabD-fabG-acpP-fabF-yceD



Position: 6313-6462, Conformation: #0







97% 90% 75% 50% Nucleotide present N N N Nucleotide identify E < 0.1 Base-pair covariation E < 0.05 Helix-level covariation 97% 90% 75%

R A R Y U G G G R G C R R U Y R U A R Y U C A C A A R U C A U G A C G G C A Y Y U R Y U G G Y G C G C G G Y G R U G A R C R U Y Y Y R U Y U R R C U R R A Y A R R Y R Y C C R C C R A C A U Y A A Y Y U G A R A Y C Y G R Y G R R G R U G Y G 5'