sraB-rpmF-plsX-fabH-fabD-fabG-acpP-fabF-yceD



Position: 5157-5331, Conformation: #1







DMS reactivity > 1.0 0.0 0.4 0.7 G/U/No data
Position: 0 (position.label in template: 0.5')5' Position: 1 (position.label in template: 1.C) Reactivity: nanC Position: 2 (position.label in template: 2.U) Reactivity: nanU Position: 3 (position.label in template: 3.U) Reactivity: nanU Position: 4 (position.label in template: 4.G) Reactivity: nanG Position: 5 (position.label in template: 5.A) Reactivity: nanA Position: 6 (position.label in template: 6.C) Reactivity: nanC Position: 7 (position.label in template: 7.A) Reactivity: nanA Position: 8 (position.label in template: 8.C) Reactivity: nanC Position: 9 (position.label in template: 9.C) Reactivity: nanC Position: 10 (position.label in template: 10.G) Reactivity: nanG Position: 11 (position.label in template: 11.U) Reactivity: nanU Position: 12 (position.label in template: 12.U) Reactivity: nanU Position: 13 (position.label in template: 13.G) Reactivity: nanG Position: 14 (position.label in template: 14.A) Reactivity: nanA Position: 15 (position.label in template: 15.G) Reactivity: nanG Position: 16 (position.label in template: 16.C) Reactivity: nanC Position: 17 (position.label in template: 17.U) Reactivity: nanU Position: 18 (position.label in template: 18.G) Reactivity: nanG Position: 19 (position.label in template: 19.G) Reactivity: nanG Position: 20 (position.label in template: 20.U) Reactivity: nanU Position: 21 (position.label in template: 21.A) Reactivity: nanA Position: 22 (position.label in template: 22.A) Reactivity: nanA Position: 23 (position.label in template: 23.U) Reactivity: nanU Position: 24 (position.label in template: 24.G) Reactivity: nanG Position: 25 (position.label in template: 25.G) Reactivity: nanG Position: 26 (position.label in template: 26.C) Reactivity: nanC Position: 27 (position.label in template: 27.U) Reactivity: nanU Position: 28 (position.label in template: 28.C) Reactivity: nanC Position: 29 (position.label in template: 29.U) Reactivity: nanU Position: 30 (position.label in template: 30.G) Reactivity: nanG Position: 31 (position.label in template: 31.G) Reactivity: nanG Position: 32 (position.label in template: 32.A) Reactivity: nanA Position: 33 (position.label in template: 33.A) Reactivity: nanA Position: 34 (position.label in template: 34.G) Reactivity: nanG Position: 35 (position.label in template: 35.A) Reactivity: nanA Position: 36 (position.label in template: 36.A) Reactivity: nanA Position: 37 (position.label in template: 37.G) Reactivity: nanG Position: 38 (position.label in template: 38.A) Reactivity: nanA Position: 39 (position.label in template: 39.G) Reactivity: nanG Position: 40 (position.label in template: 40.U) Reactivity: nanU Position: 41 (position.label in template: 41.U) Reactivity: nanU Position: 42 (position.label in template: 42.U) Reactivity: nanU Position: 43 (position.label in template: 43.G) Reactivity: nanG Position: 44 (position.label in template: 44.A) Reactivity: 1A Position: 45 (position.label in template: 45.U) Reactivity: nanU Position: 46 (position.label in template: 46.A) Reactivity: 1A Position: 47 (position.label in template: 47.C) Reactivity: 0C Position: 48 (position.label in template: 48.U) Reactivity: nanU Position: 49 (position.label in template: 49.G) Reactivity: nanG Position: 50 (position.label in template: 50.A) Reactivity: 1A Position: 51 (position.label in template: 51.G) Reactivity: nanG Position: 52 (position.label in template: 52.A) Reactivity: 0.5A Position: 53 (position.label in template: 53.U) Reactivity: nanU Position: 54 (position.label in template: 54.U) Reactivity: nanU Position: 55 (position.label in template: 55.C) Reactivity: 0.5C Position: 56 (position.label in template: 56.C) Reactivity: 0C Position: 57 (position.label in template: 57.G) Reactivity: nanG Position: 58 (position.label in template: 58.G) Reactivity: nanG Position: 59 (position.label in template: 59.A) Reactivity: 1A Position: 60 (position.label in template: 60.C) Reactivity: 0.5C Position: 61 (position.label in template: 61.G) Reactivity: nanG Position: 62 (position.label in template: 62.A) Reactivity: 0.5A Position: 63 (position.label in template: 63.A) Reactivity: 0.5A Position: 64 (position.label in template: 64.G) Reactivity: nanG Position: 65 (position.label in template: 65.A) Reactivity: 1A Position: 66 (position.label in template: 66.A) Reactivity: 0.5A Position: 67 (position.label in template: 67.G) Reactivity: nanG Position: 68 (position.label in template: 68.C) Reactivity: 0.5C Position: 69 (position.label in template: 69.U) Reactivity: nanU Position: 70 (position.label in template: 70.G) Reactivity: nanG Position: 71 (position.label in template: 71.A) Reactivity: 1A Position: 72 (position.label in template: 72.G) Reactivity: nanG Position: 73 (position.label in template: 73.A) Reactivity: 0A Position: 74 (position.label in template: 74.A) Reactivity: 0A Position: 75 (position.label in template: 75.A) Reactivity: 1A Position: 76 (position.label in template: 76.A) Reactivity: 1A Position: 77 (position.label in template: 77.U) Reactivity: nanU Position: 78 (position.label in template: 78.C) Reactivity: 0C Position: 79 (position.label in template: 79.A) Reactivity: 0A Position: 80 (position.label in template: 80.C) Reactivity: 0.5C Position: 81 (position.label in template: 81.C) Reactivity: 0.5C Position: 82 (position.label in template: 82.A) Reactivity: 1A Position: 83 (position.label in template: 83.C) Reactivity: 1C Position: 84 (position.label in template: 84.C) Reactivity: 0C Position: 85 (position.label in template: 85.G) Reactivity: nanG Position: 86 (position.label in template: 86.U) Reactivity: nanU Position: 87 (position.label in template: 87.U) Reactivity: nanU Position: 88 (position.label in template: 88.C) Reactivity: 0.5C Position: 89 (position.label in template: 89.A) Reactivity: 1A Position: 90 (position.label in template: 90.G) Reactivity: nanG Position: 91 (position.label in template: 91.G) Reactivity: nanG Position: 92 (position.label in template: 92.C) Reactivity: 0.5C Position: 93 (position.label in template: 93.U) Reactivity: nanU Position: 94 (position.label in template: 94.G) Reactivity: nanG Position: 95 (position.label in template: 95.C) Reactivity: 0C Position: 96 (position.label in template: 96.C) Reactivity: 0C Position: 97 (position.label in template: 97.A) Reactivity: 0.5A Position: 98 (position.label in template: 98.U) Reactivity: nanU Position: 99 (position.label in template: 99.U) Reactivity: nanU Position: 100 (position.label in template: 100.G) Reactivity: nanG Position: 101 (position.label in template: 101.A) Reactivity: 0.5A Position: 102 (position.label in template: 102.U) Reactivity: nanU Position: 103 (position.label in template: 103.U) Reactivity: nanU Position: 104 (position.label in template: 104.A) Reactivity: 0A Position: 105 (position.label in template: 105.C) Reactivity: 1C Position: 106 (position.label in template: 106.A) Reactivity: 1A Position: 107 (position.label in template: 107.U) Reactivity: nanU Position: 108 (position.label in template: 108.C) Reactivity: 0C Position: 109 (position.label in template: 109.A) Reactivity: 0A Position: 110 (position.label in template: 110.A) Reactivity: 0A Position: 111 (position.label in template: 111.C) Reactivity: 0.5C Position: 112 (position.label in template: 112.G) Reactivity: nanG Position: 113 (position.label in template: 113.G) Reactivity: nanG Position: 114 (position.label in template: 114.C) Reactivity: 0C Position: 115 (position.label in template: 115.C) Reactivity: 0C Position: 116 (position.label in template: 116.A) Reactivity: 1A Position: 117 (position.label in template: 117.C) Reactivity: 0C Position: 118 (position.label in template: 118.C) Reactivity: 0C Position: 119 (position.label in template: 119.A) Reactivity: 1A Position: 120 (position.label in template: 120.G) Reactivity: nanG Position: 121 (position.label in template: 121.G) Reactivity: nanG Position: 122 (position.label in template: 122.C) Reactivity: 0C Position: 123 (position.label in template: 123.G) Reactivity: nanG Position: 124 (position.label in template: 124.U) Reactivity: nanU Position: 125 (position.label in template: 125.A) Reactivity: 1A Position: 126 (position.label in template: 126.A) Reactivity: 0A Position: 127 (position.label in template: 127.G) Reactivity: nanG Position: 128 (position.label in template: 128.U) Reactivity: nanU Position: 129 (position.label in template: 129.G) Reactivity: nanG Position: 130 (position.label in template: 130.A) Reactivity: 0A Position: 131 (position.label in template: 131.A) Reactivity: 0.5A Position: 132 (position.label in template: 132.C) Reactivity: 1C Position: 133 (position.label in template: 133.A) Reactivity: 0.5A Position: 134 (position.label in template: 134.U) Reactivity: nanU Position: 135 (position.label in template: 135.C) Reactivity: 0C Position: 136 (position.label in template: 136.U) Reactivity: nanU Position: 137 (position.label in template: 137.C) Reactivity: 0C Position: 138 (position.label in template: 138.C) Reactivity: 0C Position: 139 (position.label in template: 139.A) Reactivity: 0A Position: 140 (position.label in template: 140.G) Reactivity: nanG Position: 141 (position.label in template: 141.G) Reactivity: nanG Position: 142 (position.label in template: 142.C) Reactivity: 0C Position: 143 (position.label in template: 143.G) Reactivity: nanG Position: 144 (position.label in template: 144.G) Reactivity: nanG Position: 145 (position.label in template: 145.U) Reactivity: nanU Position: 146 (position.label in template: 146.C) Reactivity: 0C Position: 147 (position.label in template: 147.G) Reactivity: nanG Position: 148 (position.label in template: 148.U) Reactivity: nanU Position: 149 (position.label in template: 149.U) Reactivity: nanU Position: 150 (position.label in template: 150.C) Reactivity: 0.5C Position: 151 (position.label in template: 151.G) Reactivity: nanG Position: 152 (position.label in template: 152.A) Reactivity: 0A Position: 153 (position.label in template: 153.C) Reactivity: 0C Position: 154 (position.label in template: 154.C) Reactivity: 0C Position: 155 (position.label in template: 155.G) Reactivity: nanG Position: 156 (position.label in template: 156.C) Reactivity: 0C Position: 157 (position.label in template: 157.C) Reactivity: 0C Position: 158 (position.label in template: 158.U) Reactivity: nanU Position: 159 (position.label in template: 159.G) Reactivity: nanG Position: 160 (position.label in template: 160.A) Reactivity: 0A Position: 161 (position.label in template: 161.G) Reactivity: nanG Position: 162 (position.label in template: 162.U) Reactivity: nanU Position: 163 (position.label in template: 163.U) Reactivity: nanU Position: 164 (position.label in template: 164.U) Reactivity: nanU Position: 165 (position.label in template: 165.U) Reactivity: nanU Position: 166 (position.label in template: 166.A) Reactivity: 0.5A Position: 167 (position.label in template: 167.U) Reactivity: nanU Position: 168 (position.label in template: 168.C) Reactivity: 0C Position: 169 (position.label in template: 169.U) Reactivity: nanU Position: 170 (position.label in template: 170.U) Reactivity: nanU Position: 171 (position.label in template: 171.U) Reactivity: nanU Position: 172 (position.label in template: 172.U) Reactivity: nanU Position: 173 (position.label in template: 173.U) Reactivity: nanU Position: 174 (position.label in template: 174.G) Reactivity: nanG Position: 175 (position.label in template: 175.U) Reactivity: nanU Position: 176 (position.label in template: 176.C) Reactivity: 0C Position: 177 (position.label in template: 177.C) Reactivity: 0C Position: 178 (position.label in template: 178.C) Reactivity: nanC Position: 179 (position.label in template: 179.A) Reactivity: nanA Position: 180 (position.label in template: 180.C) Reactivity: nanC Position: 181 (position.label in template: 181.U) Reactivity: nanU Position: 182 (position.label in template: 182.A) Reactivity: nanA Position: 183 (position.label in template: 183.G) Reactivity: nanG Position: 184 (position.label in template: 184.A) Reactivity: nanA Position: 185 (position.label in template: 185.A) Reactivity: nanA Position: 186 (position.label in template: 186.U) Reactivity: nanU Position: 187 (position.label in template: 187.C) Reactivity: nanC Position: 188 (position.label in template: 188.A) Reactivity: nanA Position: 189 (position.label in template: 189.U) Reactivity: nanU Position: 190 (position.label in template: 190.U) Reactivity: nanU Position: 191 (position.label in template: 191.U) Reactivity: nanU Position: 192 (position.label in template: 192.U) Reactivity: nanU Position: 193 (position.label in template: 193.U) Reactivity: nanU Position: 194 (position.label in template: 194.U) Reactivity: nanU Position: 195 (position.label in template: 195.C) Reactivity: nanC Position: 196 (position.label in template: 196.C) Reactivity: nanC Position: 197 (position.label in template: 197.C) Reactivity: nanC Position: 198 (position.label in template: 198.U) Reactivity: nanU Position: 199 (position.label in template: 199.C) Reactivity: nanC Position: 200 (position.label in template: 200.C) Reactivity: nanC Position: 201 (position.label in template: 201.C) Reactivity: nanC Position: 202 (position.label in template: 202.U) Reactivity: nanU Position: 203 (position.label in template: 203.G) Reactivity: nanG Position: 204 (position.label in template: 204.G) Reactivity: nanG Position: 205 (position.label in template: 205.A) Reactivity: nanA Position: 206 (position.label in template: 206.G) Reactivity: nanG Position: 207 (position.label in template: 207.G) Reactivity: nanG Position: 208 (position.label in template: 208.A) Reactivity: nanA Position: 209 (position.label in template: 209.C) Reactivity: nanC Position: 210 (position.label in template: 210.A) Reactivity: nanA Position: 211 (position.label in template: 211.A) Reactivity: nanA Position: 212 (position.label in template: 212.A) Reactivity: nanA Position: 213 (position.label in template: 213.C) Reactivity: nanC Position: 214 (position.label in template: 214.G) Reactivity: nanG Position: 215 (position.label in template: 215.U) Reactivity: nanU Position: 216 (position.label in template: 216.3')3' 10 20 30 50 100 150 200


sraB-rpmF-plsX-fabH-fabD-fabG-acpP-fabF-yceD



Position: 5157-5331, Conformation: #1







Retained alignments:


   NC_002570.2       UGUUGAGCUCG.UAA..UGG..AGCUAGAAGAUGAAUUCGAUCUUGAAAUUUCAGAUGAAGAAGCAGAAAAAAUUGCGAC.GGUU...G-.-.-...-..--...--.-.-.-.--.-----cugaugugguug.........................................................aauacauagaag..-..-.-...-..-.........-..--..-.-........-..-...-...........G.C.C..G..U....C.A.........G....U....A...A..........G......U...............U...............U...............A.......A..........C....AG.-..-..-...-.--.-.....-.-....-...-gucccauguguuuauaugggac..................................cuccuuuucuacaacaugcuuuu...----.--.-..C.UC.G....U.U.U..U...A.U........C...C....C....G...U..U...A......A.C..U....AgcguuA.......G.G....A....CU..U...U....C..A....U..U.U.U..........................................................A..A.G..G.CU.U...C.A.A.G............................................C.A.G.U..A.A.A..AA.AA
   NC_003910.7       UGUUGAAUUAG.UUA..UGG..CGUUAGAAGAAGAAUUUGAUACUGAAAUUCCUGACGAAGAAGCUGAAAAAAUCACAAC.AGUU...CA.A.G...C..AG...CA.A.U.C.GA.UUAC-guuacugcuaaccag...................................................uaauuguuaauaagu..U..C.G...A..U.........-..AU..U.A........U..C...G...........A.G.C..U..U....-.A.........G....U....A...A..........A......A...............U...............A...............A.......U..........A....AA.A..G..C...G.GU.-.....-.-....-...-auacuuaa..............................................................uuguaagug...-ACC.GC.U..U.U-.-....-.-.-..-...-.-........U...U....U....U...U..U...A......U.C..U....A.....U.......A.-....-....AG..A...U....G..A....C..G.A.U..........................................................A..U.U..A.UU.C...A.A.U.A............................................G.A.A.G..A.C.U..AU.CA
   NC_004347.2       UGUUGAGUUGG.UUA..UGG..CUCUGGAAGAAGAGUUUGAUACCGAGAUCCCUGAUGAAGAAGCUGAAAAGAUCACUAC.UGUU...CA.A.G...C..A-...--.-.-.-.--.-----gcgaucgauuacguuu.................................................cuaagaaucaguaauu..-..-.-...-..-.........-..--..-.-........C..U...G...........A.A.U..U..C....U.A.........G....A....G...A..........A......-...............-...............-...............-.......-..........-....CA.G..G..C...G.GC.A.....U.A....U...A..................................................................................UGCC.GC.C..U.G-.-....-.U.U..U...U.U........G...U....U....U...U..A...G......C.C..C....C.....G.......C.C....U....C-..-...-....-..A....U..U.C.U..........................................................-..-.G..C.AA.U...C.G.U.G............................................-.-.-.-..-.-.-..--.--
   NC_004603.1       UGUAGAACUAG.UUA..UGG..CUCUAGAAGAGGAAUUCGACACUGAGAUUCCUGAUGAAGAAGCUGAGAAGAUCACUAC.UGUU...CA.A.G...C..UG...CA.A.U.C.GA.CUACG...................................................................................U..A.A...A..C.........A..GC..-.G........C..U...C...........A.G.U..A..-....-.-.........A....U....U...A..........U......C...............U...............C...............U.......C..........C....CA.G..G..C...G.GU.C.....UcC....U...A..................................................................................GACC.GC.C..U.GU.G....U.U.C..U...U.Ucu...aacU...U....C....U...U..C..uA......U.C..C....U.....C.......U.C....A....UA..G...A....A..A....U..A.U.U..........................................................C..A.A..U.UC.C...C.-.-.-............................................G.G.A.G..A.A.U..UA.UA
   NC_004757.1       UGUUGAGCUGG.UCA..UGG..CGCUCGAAGAAGAGUUCGAAUGCGAAAUUCCUGAUGAGCAAGCUGAAAAAAUCAAUAC.GGUU...CA.G.G...A..AG...CG.A.U.C.GA.UU---...................................................................................U..C.G...U..-.........A..GC..A.G........C..C...Aac.......gcA.G.C..U..C....A.G.........U....-....A...A..........A......A...............A...............-...............-.......-..........-....--.-..-..C...-.--.-.....-.-....-...-aguuuu...................................................................uucaau...----.GA.U..U.CA.U....U.G.G..A...G.U........C...G....U....U...U..U...G......U.C..C....A.....A.......A.C....G....UA..A...A...gU..A....G..C.C.A..........................................................U..U.A..C.C-.-...-.-.-.G............................................-.-.G.G..U.U.A..GG.CA
   NC_005126.1       AGUUGAGCUGG.UAA..UGG..CUCUGGAAGAAGAGUUCGAUAUCGAAAUUCCAGAUGAAGAAGCAGAAAAGAUCACUAC.AGUU...CA.G.G...C..AG...CU.A.U.U.GA.UUACG...................................................................................U..C.C...A..G.........A..AC..C.A........-..-...A...........A.G.C..GaaU....A.A.........G....U....G...A..........A......C...............A...............C...............A.......C..........C....UA.G..G..C...G.GU.C.....A.U....U...C..................................................................................GACC.GC.C..U.A-.-....-.-.-..-...-.U........G...U....U....U...C..U...G......C.C..C....U.....A.......-.A....A....--..-...U....A..A....U..U.U.C..........................................................-..-.-..C.CU.C...C.U.U.G............................................G.A.G.G..A.U.A..AG.CG
   NC_006300.1       AGUUGAAUUAG.UAA..UGG..CUUUAGAAGAAGAAUUCGAUAUCGAAAUUCCUGAUGAAGAAGCUGAAAAAAUUACAAC.GGUU...CA.A.U...C..AG...CA.A.U.U.GA.UUACG..................................................................................uU..C.A...A..A.........-..A-..C.A........A..U...C...........A.A.-..-..U....A.A.........-....U....U...A..........A......U...............U...............C...............A.......U..........U....AA.G..G..C...G.GU.A.....-.A....U...-..................................................................................AACC.GC.C..U.UA.A....-.-.-..-...-.-........U...U....U....U...U..U...A......U.C..U....C.....A.......U.U....C....UC..C...C....C..C....C..C.U.U..........................................................U..C.A..U.CU.U...U.-.-.-............................................-.-.-.-..-.-.-..--.--
   NC_006526.2       CAUCGAAUUGG.UUA..UGG..CUUUCGAAGAAGAAUUCGGCGUUGAAAUUCCUGACGAUUCCGUAGAAAAAAUCGGUAC.GGUC...AA.A.G...A..UG...CC.G.U.C.AG.CUAUA...................................................................................U..C.G...A..C.........G..AG..C.A........C..A...A...........G.G.C..U..U....A.A.........U....U....A...A..........U......C...............C...............U...............A.......A..........A....AA.C..A..G...G.AU.C.....G.-....-...-gcguuu..................................................................auccucc...GAUC.CU.G..U.U-.-....-.U.U..U...A.U........C...U....Cu..gU...U..U...A......U.U..-....-.....-.......-.-....-....CU..A...U....U..A....U..C.U.U..........................................................U..U.G..-.--.-...-.-.-.-ccucuaccuucuau..............uaagaauaaaauug..-.-.-.-..-.-.-..--.--
   NC_007481.1       AGUUGAAUUAG.UAA..UGG..CUCUUGAAGAAGAGUUUGAUACUGAGAUCCCUGAUGAAGAAGCUGAAAAAAUCACUAC.AGUA...CA.A.U...C..UG...CU.A.U.C.GA.UUACG...................................................................................U..U.-...A..C.........A..GC..U.C........-..-...A...........C.G.C..U..-....G.A.........G....U....A...A..........UuaaucgC...............A...............U...............A.......U..........U....AA.G..G..G...C.AG.C.....A.U....U...C..................................................................................GCUG.CC.C..U.UA.-....-.-.-..-...A.U........C...U....C....U...A..U...A......U.C..C....A.....A.......A.-....-....--..-...-....-..-....-..-.-.-ccacuuc........................................aaaguau....-..-.-..-.--.-...-.-.-.-augauuc...........................aaagcaaa..-.-.-.-..G.C.U..AA.--
   NC_007498.2       UGUAGAACUGG.UGA..UGG..CUCUUGAAGAGGAAUUCGAUAUCGAAAUCUCCGACGAAGAUGCCGAAAAAAUCCAGAC.CGUU...CA.G.G...A..UG...CC.G.U.C.GA.UUACA...................................................................................U..U.U...-..C.........G..GC..U.Aa.....uuC..C...U...........G.A.U..U..U....G.A.........U....U....U...A..........G......C...............Agg...........uaU...............U.......C..........A....GG.G..G..A...G.G-.-.....-.-....-...-gagaugcgucu........................................................gcuuucgcguuu...--CC.UC.C..C.CU.U....U.U.U..U...G.A........U...U....G....U...U..U...U......G.C..A....A.....G.......U.-....-....--..-...-....-..-....-..-.-.-gaucggcugu.................................uggcaggguuu....-..-.-..U.CC.G...C.A.G.G............................................C.G.G.C..A.C.A..UA.AA
   NC_007517.1       CGUGGAACUGG.UGA..UGG..CCCUCGAGGAGGAGUUCGACAUCGAGAUCUCCGACGAAGACGCAGAGAAGAUCCAAAG.CGUA...CA.G.G...A..CG...CC.A.U.C.GA.CUACA...................................................................................U..C.A...C..C.........G.aGC.aU.A........C..Cu.a-a.........aC.A.C..G..A....G.G.........G....G....G...A..........A......-...............-...............-...............-.......-..........-....--.-..-..-...-.--.-.....-.-....-...-gg...........................................................................gg...----.--.-..-.--.A....A.C.C..U...U.C........C...C....C....C...U..U...U......U.C..A....C.....A.......C.A...gA....GC..G...G....C..A....C..U.G.C..........................................................C..G.C..U.AU.C...U.C.U.G............................................C.A.C.G..A.U.-..--.--
   NC_007575.1       AGUUGAAUUGG.UAA..UGG..CUCUUGAAGAGAAAUUUGAUAUCGAAAUUCCUGAUGAUGAAGCAGAAAAAAUUAGAAC.UGUU...AA.A.G...A..UG...UA.G.U.U.AA.CUAUA...................................................................................U..C.G...A..A.........A..GU..A.A........A..U...A...........A.U.U..-..-....A.U.........C....U....A...A..........G......A...............-...............-...............-.......U..........U....CU.A..C..C...G.AG.A.....A.U....A...U..................................................................................ACUC.GG.U..A.GA.A....A.U.A..C...U.U........U...U....UaaagU...U..U...A......G.C..A....A.....A.......C.U....A....A-..-...-....-..-....-..-.-.-..........................................................-..-.-..-.--.-...-.-.-.-............................................-.-.-.-..-.-.-..--.--
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   NZ_LT906449.1     CGUUGAAUUGA.UUA..UGG..AGUUUGAAAAAGAGUUUGAUAUUCAAAUCCCAGAUGACCAAGCAGAGAAUAUUGCGAC.UG-U...GG.G.U...C..AG...GCaA.U.C.AA.AUACA...................................................................................U..C.G...A..Ag......acG..CU..A.A........G..C...A...........A.U.A..A..U....U.G.........G....C....U...A..........A......A...............A...............-...............-.......-..........-....--.-..-..-...-.G-.-.....-.-....-...-guaguaggcuauaag................................................cuaagagauuggcuua...--U-.--.-..A.GC.U....U.A.G..U...A.C........C...U....U....U...U..U...G......A.U..U....U.....U.......U.-....-....--..-...-....-..-....-..-.-.-agaa.............................................gcaag....-..-.-..-.--.-...-.-.-.-aaccuaaa.........................ugcuaaacu..-.-.-.-..G.A.A..AA.CG
   NZ_LT906451.1     UGUUGAAUUGG.UGA..UGG..CUCUAGAAGAGGAAUUUGAAACAGAAAUCCCUGAUGAAAAAGCUGAGAAGAUCACCAC.CGUU...CA.A.G...A..AG...CG.A.U.C.GA.UUACA...................................................................................U..C.G...A..A.........-..GC..A.Aa......uC..U...U...........A.A.C..A..A....A.G.........A....A....G...A..........A......G...............C...............U...............-.......-..........-....--.-..-..-...-.--.-.....-.-....-...-uaaua....................................................................acuucg...----.--.-..-.-A.G....G.A.G..U...U.U........U...U....C....A...U..U...G......A.C..U....A.....A.......G.C....G....GC..G...U....-..-....-..-.-.-guuguuguuaccggcau...................ggggaugguuacaccagu....C..G.G..U.CU.A...A.A.U.G............................................U.A.G.A..A.C.A..AA.CC
   NZ_LT906463.1     AGUUGAAUUGG.UAA..UGG..CUUUAGAAGAAGAAUUCGAUAUCGAAAUUCCUGAUGAAGAAGCUGAAAAAAUCACAAC.UGUU...CA.A.U...C..UG...CG.A.U.U.GA.CUACG..................................................................................uU..C.A...A..A.........-..AC..-.A........A..U...C...........A.A.U..A.aU....U.U.........C....U....G...G..........-......-...............-...............-...............-.......-..........C....AA.G..G..C...G.GU.U.....U.U....A...A..................................................................................AACC.GC.C..U.UU.C....U.U.U..U...A.U........A...A....U....C...U..C...C......U.C..C....C.....U.......C.U....-....--..-...-....-..-....-..-.-.-u...................................................cc....-..-.-..-.--.-...-.-.-.-c........................................c..-.-.-.-..U.C.A..AA.CU
   NZ_LT906464.1     CGCAGAAUUAG.UGA..UGG..AAUUAGAAGAUGAAUUCGGUACAGAAAUUCCGGAUGAAGAAGCGGAAAAAAUCAAUAC.AGUA...GG.C.G...A..CG...CU.G.U.U.AA.UUUCA...................................................................................U..U.A...A..U.........A..CA..C.U........U..G...A...........A.A.A..A..U....A.A.........U....U....G...U..........U......U...............U...............C...............A.......U..........C....UG.A..G..C...C.GA.U.....U.U....G...U..................................................................................GUCG.GC.U..C.AG.A....U.U.U..U...U.U........A...C....U....A...U.aU...G......U.A..U....-.....U.......U.U....U....GA..A...U....C..A....U..G.C.A..........................................................U..U.-..-.--.-...-.-.-.-............................................-.-.-.-..-.-.-..--.--
   NZ_LT906479.1     CGUUGAGCUGG.UAA..UGG..CACUGGAAGAAGAAUUCGACACUGAGAUUCCAGACGAAGAAGCUGAGAAGAUCACUAC.UGUU...CA.G.G...C..AG...CU.A.U.U.GA.UUUCA...................................................................................U..C.A...A..C.........-..GC..U.A........G..C...C...........A.G.C..A.gU....A.A.........G....A....G...A..........A......C...............A...............U...............A.......U..........C....UA.G..G..C...G.GU.C.....A.C....U...C..................................................................................GACC.GC.C..U.AA.G....U.-.-..-...-.U........U...U....U....U...C..U...A......U.C..C....C.....-.......-.U....A....GU..G...U....C..A....U.aU.U.U..........................................................U..U.C..C.CU.C...C.U.U.G............................................G.A.G.G..A.C.A..AA.CG
   NZ_OU015521.1     GGUUGAGUUAG.UAA..UGG..CAUUAGAAGAGCAAUUCGAUACCGAAAUCCCCGAUGAAGAAGCAGAAAAGAUUACGAC.CGUU...CA.G.C...A..GG...CG.A.U.U.GA.UUACA...................................................................................U..U.A...A.aU.........C..GC..A.Uu.....cuG..C...A...........A.G.C..G..A....A.U.........C....U....A...C..........U......G...............A...............U...............U.......-..........-....--.-..-..-...-.--.-.....-.-....-...-aauuuuu.................................................................gauuaug...----.--.-..-.-C.C....G.U.U..U...U.U........C...U....G....C...U..A...A......U.C..U....C.....U.......-.-....-....--..-...-....-..-....-..-.-.-gaggaa..........................................ugcugc....-..-.-..-.--.-...-.-.-.-auug..................................aagg..-.-.-.-..A.A.C..GG.CG
   NZ_OU594967.1     UGUUGAGCUGG.UGA..UGG..CUCUGGAAGAAGAGUUUGAUACUGAGAUUCCAGAUGAAGAAGCUGAAAAAAUCACUAC.CGUU...CA.A.A...C..AG...CU.A.U.U.GA.UUACA...................................................................................U..U.C...-..U.........U..GC..U.A........-..-...-...........A.U.C..A..A....G.A.........C....U....A...A..........U......C...............U...............U...............C.......U..........A....AA.A..C..A...G.GC.A.....G.U....UugaC..................................................................................UGCC.UG.U..U.UU.G....A.U.C..U...C.A........C...U....C....U...U..U...A......U.U..U....C.....G.......U.A....U....UC..-...-....-..-....-..-.-.-..........................................................-..-.C..C.AU.U...U.C.U.G............................................G.A.G.G..-.C.U..AA.UC
   NZ_OU912926.1     GGUUGAGCUGG.UGA..UGG..CGCUGGAAGAAGAGUUCGAGUGUGAAAUUCCAGACGAAGACGCUGAAAAAAUAACUAC.GGUG...CA.A.C...A..GG...CA.A.U.C.GA.UUACG...................................................................................U..U.A...A..C.........G..--..-.A........U..C...A...........-.U.C..C..U....A.A.........G....U....A...A..........-......-...............-...............-...............-.......-..........-....--.-..-..-...-.--.-.....-.-....-...-uu...........................................................................ca...----.--.-..-.-U.C....U.U.U..U...C.G........C...U....U....U...U..C...C......-.C..C....U.....A.......A.A....A....UA..A...-....C..G....G..A.G.U..........................................................U..U.G..G.UU.U...G.G.C.A............................................A.A.A.C..G.C.A..GA.GU


   Structure         ((((((((((.......)))..))).(((.((((((................(((.........)))......((((....((((......(.(.......(...((...(.(.((.........................................................................................)..).)...)............)..)).............)..)...............).).)..)...................)....)....)...).........................................................................................((.(..(..(...(.((.(...................................................................................................)))).)).)..).).............................)...)....)....)...)..)..........).)..)..............................((..(..................................................................................)..).)..(.((.(......................................................).).).).........)).))


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sraB-rpmF-plsX-fabH-fabD-fabG-acpP-fabF-yceD



Position: 5157-5331, Conformation: #1







97% 90% 75% 50% Nucleotide present N N N Nucleotide identify E < 0.1 Base-pair covariation E < 0.05 Helix-level covariation 97% 90% 75%

G U Y G A R Y U R G U A U G G C Y U G A A G A R G A R U U Y G R Y R Y Y G A R A U Y C C G A Y G A R G A G C G A R A A R A U Y R Y A C G U R G Y R U Y R A U Y Y R Y Y Y Y Y Y Y 5'