sraB-rpmF-plsX-fabH-fabD-fabG-acpP-fabF-yceD



Position: 5157-5331, Conformation: #0







DMS reactivity > 1.0 0.0 0.4 0.7 G/U/No data
Position: 0 (position.label in template: 0.5')5' Position: 1 (position.label in template: 1.C) Reactivity: nanC Position: 2 (position.label in template: 2.U) Reactivity: nanU Position: 3 (position.label in template: 3.U) Reactivity: nanU Position: 4 (position.label in template: 4.G) Reactivity: nanG Position: 5 (position.label in template: 5.A) Reactivity: nanA Position: 6 (position.label in template: 6.C) Reactivity: nanC Position: 7 (position.label in template: 7.A) Reactivity: nanA Position: 8 (position.label in template: 8.C) Reactivity: nanC Position: 9 (position.label in template: 9.C) Reactivity: nanC Position: 10 (position.label in template: 10.G) Reactivity: nanG Position: 11 (position.label in template: 11.U) Reactivity: nanU Position: 12 (position.label in template: 12.U) Reactivity: nanU Position: 13 (position.label in template: 13.G) Reactivity: nanG Position: 14 (position.label in template: 14.A) Reactivity: nanA Position: 15 (position.label in template: 15.G) Reactivity: nanG Position: 16 (position.label in template: 16.C) Reactivity: nanC Position: 17 (position.label in template: 17.U) Reactivity: nanU Position: 18 (position.label in template: 18.G) Reactivity: nanG Position: 19 (position.label in template: 19.G) Reactivity: nanG Position: 20 (position.label in template: 20.U) Reactivity: nanU Position: 21 (position.label in template: 21.A) Reactivity: nanA Position: 22 (position.label in template: 22.A) Reactivity: nanA Position: 23 (position.label in template: 23.U) Reactivity: nanU Position: 24 (position.label in template: 24.G) Reactivity: nanG Position: 25 (position.label in template: 25.G) Reactivity: nanG Position: 26 (position.label in template: 26.C) Reactivity: nanC Position: 27 (position.label in template: 27.U) Reactivity: nanU Position: 28 (position.label in template: 28.C) Reactivity: nanC Position: 29 (position.label in template: 29.U) Reactivity: nanU Position: 30 (position.label in template: 30.G) Reactivity: nanG Position: 31 (position.label in template: 31.G) Reactivity: nanG Position: 32 (position.label in template: 32.A) Reactivity: nanA Position: 33 (position.label in template: 33.A) Reactivity: nanA Position: 34 (position.label in template: 34.G) Reactivity: nanG Position: 35 (position.label in template: 35.A) Reactivity: nanA Position: 36 (position.label in template: 36.A) Reactivity: nanA Position: 37 (position.label in template: 37.G) Reactivity: nanG Position: 38 (position.label in template: 38.A) Reactivity: nanA Position: 39 (position.label in template: 39.G) Reactivity: nanG Position: 40 (position.label in template: 40.U) Reactivity: nanU Position: 41 (position.label in template: 41.U) Reactivity: nanU Position: 42 (position.label in template: 42.U) Reactivity: nanU Position: 43 (position.label in template: 43.G) Reactivity: nanG Position: 44 (position.label in template: 44.A) Reactivity: 1A Position: 45 (position.label in template: 45.U) Reactivity: nanU Position: 46 (position.label in template: 46.A) Reactivity: 0A Position: 47 (position.label in template: 47.C) Reactivity: 0.5C Position: 48 (position.label in template: 48.U) Reactivity: nanU Position: 49 (position.label in template: 49.G) Reactivity: nanG Position: 50 (position.label in template: 50.A) Reactivity: 0A Position: 51 (position.label in template: 51.G) Reactivity: nanG Position: 52 (position.label in template: 52.A) Reactivity: 1A Position: 53 (position.label in template: 53.U) Reactivity: nanU Position: 54 (position.label in template: 54.U) Reactivity: nanU Position: 55 (position.label in template: 55.C) Reactivity: 0C Position: 56 (position.label in template: 56.C) Reactivity: 0C Position: 57 (position.label in template: 57.G) Reactivity: nanG Position: 58 (position.label in template: 58.G) Reactivity: nanG Position: 59 (position.label in template: 59.A) Reactivity: 0.5A Position: 60 (position.label in template: 60.C) Reactivity: 1C Position: 61 (position.label in template: 61.G) Reactivity: nanG Position: 62 (position.label in template: 62.A) Reactivity: 1A Position: 63 (position.label in template: 63.A) Reactivity: 0.5A Position: 64 (position.label in template: 64.G) Reactivity: nanG Position: 65 (position.label in template: 65.A) Reactivity: 0A Position: 66 (position.label in template: 66.A) Reactivity: 0.5A Position: 67 (position.label in template: 67.G) Reactivity: nanG Position: 68 (position.label in template: 68.C) Reactivity: 1C Position: 69 (position.label in template: 69.U) Reactivity: nanU Position: 70 (position.label in template: 70.G) Reactivity: nanG Position: 71 (position.label in template: 71.A) Reactivity: 0A Position: 72 (position.label in template: 72.G) Reactivity: nanG Position: 73 (position.label in template: 73.A) Reactivity: 1A Position: 74 (position.label in template: 74.A) Reactivity: 0.5A Position: 75 (position.label in template: 75.A) Reactivity: 0A Position: 76 (position.label in template: 76.A) Reactivity: 0A Position: 77 (position.label in template: 77.U) Reactivity: nanU Position: 78 (position.label in template: 78.C) Reactivity: 0.5C Position: 79 (position.label in template: 79.A) Reactivity: 1A Position: 80 (position.label in template: 80.C) Reactivity: 0.5C Position: 81 (position.label in template: 81.C) Reactivity: 0C Position: 82 (position.label in template: 82.A) Reactivity: 0A Position: 83 (position.label in template: 83.C) Reactivity: 1C Position: 84 (position.label in template: 84.C) Reactivity: 0C Position: 85 (position.label in template: 85.G) Reactivity: nanG Position: 86 (position.label in template: 86.U) Reactivity: nanU Position: 87 (position.label in template: 87.U) Reactivity: nanU Position: 88 (position.label in template: 88.C) Reactivity: 0.5C Position: 89 (position.label in template: 89.A) Reactivity: 0.5A Position: 90 (position.label in template: 90.G) Reactivity: nanG Position: 91 (position.label in template: 91.G) Reactivity: nanG Position: 92 (position.label in template: 92.C) Reactivity: 1C Position: 93 (position.label in template: 93.U) Reactivity: nanU Position: 94 (position.label in template: 94.G) Reactivity: nanG Position: 95 (position.label in template: 95.C) Reactivity: 0C Position: 96 (position.label in template: 96.C) Reactivity: 0C Position: 97 (position.label in template: 97.A) Reactivity: 0A Position: 98 (position.label in template: 98.U) Reactivity: nanU Position: 99 (position.label in template: 99.U) Reactivity: nanU Position: 100 (position.label in template: 100.G) Reactivity: nanG Position: 101 (position.label in template: 101.A) Reactivity: 0A Position: 102 (position.label in template: 102.U) Reactivity: nanU Position: 103 (position.label in template: 103.U) Reactivity: nanU Position: 104 (position.label in template: 104.A) Reactivity: 1A Position: 105 (position.label in template: 105.C) Reactivity: 0C Position: 106 (position.label in template: 106.A) Reactivity: 1A Position: 107 (position.label in template: 107.U) Reactivity: nanU Position: 108 (position.label in template: 108.C) Reactivity: 0C Position: 109 (position.label in template: 109.A) Reactivity: 0A Position: 110 (position.label in template: 110.A) Reactivity: 0A Position: 111 (position.label in template: 111.C) Reactivity: 0C Position: 112 (position.label in template: 112.G) Reactivity: nanG Position: 113 (position.label in template: 113.G) Reactivity: nanG Position: 114 (position.label in template: 114.C) Reactivity: 0C Position: 115 (position.label in template: 115.C) Reactivity: 0C Position: 116 (position.label in template: 116.A) Reactivity: 0.5A Position: 117 (position.label in template: 117.C) Reactivity: 0.5C Position: 118 (position.label in template: 118.C) Reactivity: 1C Position: 119 (position.label in template: 119.A) Reactivity: 0.5A Position: 120 (position.label in template: 120.G) Reactivity: nanG Position: 121 (position.label in template: 121.G) Reactivity: nanG Position: 122 (position.label in template: 122.C) Reactivity: 0.5C Position: 123 (position.label in template: 123.G) Reactivity: nanG Position: 124 (position.label in template: 124.U) Reactivity: nanU Position: 125 (position.label in template: 125.A) Reactivity: 0A Position: 126 (position.label in template: 126.A) Reactivity: 0.5A Position: 127 (position.label in template: 127.G) Reactivity: nanG Position: 128 (position.label in template: 128.U) Reactivity: nanU Position: 129 (position.label in template: 129.G) Reactivity: nanG Position: 130 (position.label in template: 130.A) Reactivity: 0.5A Position: 131 (position.label in template: 131.A) Reactivity: 1A Position: 132 (position.label in template: 132.C) Reactivity: 0.5C Position: 133 (position.label in template: 133.A) Reactivity: 0A Position: 134 (position.label in template: 134.U) Reactivity: nanU Position: 135 (position.label in template: 135.C) Reactivity: 0C Position: 136 (position.label in template: 136.U) Reactivity: nanU Position: 137 (position.label in template: 137.C) Reactivity: 0.5C Position: 138 (position.label in template: 138.C) Reactivity: 0C Position: 139 (position.label in template: 139.A) Reactivity: 0A Position: 140 (position.label in template: 140.G) Reactivity: nanG Position: 141 (position.label in template: 141.G) Reactivity: nanG Position: 142 (position.label in template: 142.C) Reactivity: 0C Position: 143 (position.label in template: 143.G) Reactivity: nanG Position: 144 (position.label in template: 144.G) Reactivity: nanG Position: 145 (position.label in template: 145.U) Reactivity: nanU Position: 146 (position.label in template: 146.C) Reactivity: 0C Position: 147 (position.label in template: 147.G) Reactivity: nanG Position: 148 (position.label in template: 148.U) Reactivity: nanU Position: 149 (position.label in template: 149.U) Reactivity: nanU Position: 150 (position.label in template: 150.C) Reactivity: 1C Position: 151 (position.label in template: 151.G) Reactivity: nanG Position: 152 (position.label in template: 152.A) Reactivity: 0A Position: 153 (position.label in template: 153.C) Reactivity: 0C Position: 154 (position.label in template: 154.C) Reactivity: 0C Position: 155 (position.label in template: 155.G) Reactivity: nanG Position: 156 (position.label in template: 156.C) Reactivity: 0C Position: 157 (position.label in template: 157.C) Reactivity: 0C Position: 158 (position.label in template: 158.U) Reactivity: nanU Position: 159 (position.label in template: 159.G) Reactivity: nanG Position: 160 (position.label in template: 160.A) Reactivity: 0A Position: 161 (position.label in template: 161.G) Reactivity: nanG Position: 162 (position.label in template: 162.U) Reactivity: nanU Position: 163 (position.label in template: 163.U) Reactivity: nanU Position: 164 (position.label in template: 164.U) Reactivity: nanU Position: 165 (position.label in template: 165.U) Reactivity: nanU Position: 166 (position.label in template: 166.A) Reactivity: 0.5A Position: 167 (position.label in template: 167.U) Reactivity: nanU Position: 168 (position.label in template: 168.C) Reactivity: 0C Position: 169 (position.label in template: 169.U) Reactivity: nanU Position: 170 (position.label in template: 170.U) Reactivity: nanU Position: 171 (position.label in template: 171.U) Reactivity: nanU Position: 172 (position.label in template: 172.U) Reactivity: nanU Position: 173 (position.label in template: 173.U) Reactivity: nanU Position: 174 (position.label in template: 174.G) Reactivity: nanG Position: 175 (position.label in template: 175.U) Reactivity: nanU Position: 176 (position.label in template: 176.C) Reactivity: 0.5C Position: 177 (position.label in template: 177.C) Reactivity: 0C Position: 178 (position.label in template: 178.C) Reactivity: nanC Position: 179 (position.label in template: 179.A) Reactivity: nanA Position: 180 (position.label in template: 180.C) Reactivity: nanC Position: 181 (position.label in template: 181.U) Reactivity: nanU Position: 182 (position.label in template: 182.A) Reactivity: nanA Position: 183 (position.label in template: 183.G) Reactivity: nanG Position: 184 (position.label in template: 184.A) Reactivity: nanA Position: 185 (position.label in template: 185.A) Reactivity: nanA Position: 186 (position.label in template: 186.U) Reactivity: nanU Position: 187 (position.label in template: 187.C) Reactivity: nanC Position: 188 (position.label in template: 188.A) Reactivity: nanA Position: 189 (position.label in template: 189.U) Reactivity: nanU Position: 190 (position.label in template: 190.U) Reactivity: nanU Position: 191 (position.label in template: 191.U) Reactivity: nanU Position: 192 (position.label in template: 192.U) Reactivity: nanU Position: 193 (position.label in template: 193.U) Reactivity: nanU Position: 194 (position.label in template: 194.U) Reactivity: nanU Position: 195 (position.label in template: 195.C) Reactivity: nanC Position: 196 (position.label in template: 196.C) Reactivity: nanC Position: 197 (position.label in template: 197.C) Reactivity: nanC Position: 198 (position.label in template: 198.U) Reactivity: nanU Position: 199 (position.label in template: 199.C) Reactivity: nanC Position: 200 (position.label in template: 200.C) Reactivity: nanC Position: 201 (position.label in template: 201.C) Reactivity: nanC Position: 202 (position.label in template: 202.U) Reactivity: nanU Position: 203 (position.label in template: 203.G) Reactivity: nanG Position: 204 (position.label in template: 204.G) Reactivity: nanG Position: 205 (position.label in template: 205.A) Reactivity: nanA Position: 206 (position.label in template: 206.G) Reactivity: nanG Position: 207 (position.label in template: 207.G) Reactivity: nanG Position: 208 (position.label in template: 208.A) Reactivity: nanA Position: 209 (position.label in template: 209.C) Reactivity: nanC Position: 210 (position.label in template: 210.A) Reactivity: nanA Position: 211 (position.label in template: 211.A) Reactivity: nanA Position: 212 (position.label in template: 212.A) Reactivity: nanA Position: 213 (position.label in template: 213.C) Reactivity: nanC Position: 214 (position.label in template: 214.G) Reactivity: nanG Position: 215 (position.label in template: 215.U) Reactivity: nanU Position: 216 (position.label in template: 216.3')3' 10 20 30 50 100 150 200


sraB-rpmF-plsX-fabH-fabD-fabG-acpP-fabF-yceD



Position: 5157-5331, Conformation: #0







Retained alignments:


   NC_002570.2       UUG.UU.GA..GC.UCG.UAA.U..G.G..A..GCUA..GAA.GAUGAAUUCGA.UCUU.GAAA.U.UU.CAGA.UGAAGAAGCAGAAAAAAUUGCG.A..CGGU...U...G.C...................................................UG.AU..G.UG.G..UUG.A..AUACA.........U..A.....G.A......A..G...G...C......C....G...U.........C....A....G....-...............-.....-...............U..........A....A......G.......U..........U....-.....-....U.....A......A...............C.....A..........G...G.U..C.C...C.A...U..G.U...G.U....U..U.....................................................AU.A.U..G..G..G.AC..C..U...C..C.....U....U......U......U......C.....U........A...C..A...A...CA......U..G.C.......U..-..-.UU....UC..U..C.....G....U.....U..U....U...A....U...CC.CG.UU......................................................AACU..A..G.C.-GU.U..-
   NC_002932.3       CGG.UC.GA..AC.UGA.UCA.U..G.G..A..GCUC..GAA.AACGAGUUCGG.CGUC.CAGA.U.UC.CUGA.UGAAGAUGCCGAGAAGAUCGGU.A..CCGU...G...C.A...................................................GC.AG..G.CC.A..UUG.A..CUACA.........U..C.....G.U......C..A...A...C......A....A...G.........A....A....A....G...............UaagcuA...............A..........A....A......G.......C..........A....U.....U....C.....U......C...............U.....U..........C...G.G..G.C...A.G...G..G.C...-.U....U..G.....................................................GC.C.C..U..G..C.CU..A..A...A..A.....C....C......A......A......C.....G........U...U..-...-...--......-..-.-.......-..-..-.--....--..-..-.....-....-.....-..-....-...-....-...--.--.--......................................................----..-..-.-.---.-..-
   NC_002939.5       CUG.UC.GA..GC.UGG.UGA.U..G.G..C..UCUC..GAG.GAAGAGUUUGA.UAUC.GAGA.U.UU.CCGA.CGAGGACGCCGAGAAAAUCCAA.A..ACGU...U...C.A...................................................GG.AU..G.CC.A..UCG.A..UUACA.........U..C.....A.C......C..G...A...G......C....A...C.........A....C....-....-...............-.....C...............U..........-....-......-.......A..........G....C.....A....C.....A......C...............A.....G..........G...A.G..G.G...G.A...A..G.G...A.G....A..G.....................................................CC.U.U..C..C..C.CU..U..U...U..U.....C....A......C......A......G.....C........A...C..G...C...GG......C..C.U.......-..-..-.--....--..-..-.....-....-.....-..-....-...-....-...--.--.--u.................................................cg..----..-..G.G.CCG.C..G
   NC_003361.3       ---.--.GA..GU.UGA.UCA.U..G.A..C..UUUG..GAG.GAAAAGUUCAA.CUUU.GAAA.U.UU.CAGA.GCAAGAUGCAGAGCAA-UUACGuA..CUGU...A...G.G...................................................CG.AC..G.UU.A..UCA.C..AUAUA.........U..U.....A.A......G..A...C...U......C....G...U.........C....A....G....Gg............uuA.....G...............U..........A....A......U.......A..........U....U.....A....C.....A......A...............A.....U..........U...U.U..A.G...G.G...U..G.C...G.U....U..U.....................................................GU.A.U..C..C..UuAG..U..G...C..A.....U....C......A......U......C.....U........U...U..U...C...AC......U..A.A.......A..A..U.AGc..gCA..C..C.....A....U.....U..U....C...U....U...CU.AU.UU......................................................UUUU..AcgU.U.---.-..-
   NC_003910.7       CUG.UU.GA..AU.UAG.UUA.U..G.G..C..GUUA..GAA.GAAGAAUUUGA.UACU.GAAA.U.UC.CUGA.CGAAGAAGCUGAAAAAAUCACA.A..CAGU...U...C.A...................................................AG.CA..G.CA.A..UCG.A..UUACG.........U..U.....-.A......C..U...G...C......U....A...A.........C....C....A....G...............U.....A...............A..........U....U......G.......U..........U....A.....A....U.....-......-...............-.....-..........-...A.A..G.U...U.C...G..A.U...A.U....U..-.....................................................AU.C.G..A..G..C.UU..A..G...U..A.....A....A......A......U......A.....A........U...A..A...A...--......-..-.-.......A..G..C.GG....UA..U..A.....C....U.....U..A....A...U....U...--.--.--guaa............................................guga..CCGC..U..U.U.UUU.-..-
   NC_004347.2       CUG.UU.GA..GU.UGG.UUA.U..G.G..C..UCUG..GAA.GAAGAGUUUGA.UACC.GAGA.U.CC.CUGA.UGAAGAAGCUGAAAAGAUCACU.A..CUGU...U...C.A...................................................AG.CA..G.CG.A..UCG.A..UUACG.........U..U.....U.C......U..A...A...G......A....A...U.........C....A....Gu.aaU...............U.....C...............U..........G....A......A.......U..........U....C.....U....A.....G......A...............G.....A..........A...C.A..G.G...C.G...G..C.A...U.A....U..A.....................................................UG.C.C..G..C..C.UG..U..U...U..-.....-....-......U......U......G.....U........U...U..U...A...GC......C..C.C.......G..C..C.UC....AU..U..C.....-....-.....-..-....-...-....U...GC.AA.UC......................................................GUG-..-..-.-.---.-..-
   NC_004603.1       CUG.UA.GA..AC.UAG.UUA.U..G.G..C..UCUA..GAA.GAGGAAUUCGA.CACU.GAGA.U.UC.CUGA.UGAAGAAGCUGAGAAGAUCACU.A..CUGU...U...C.A...................................................AG.CU..G.CA.A..UCG.A..CUACG.........U..A.....A.A......C..A...G...C......G....C...U.........C....A....G....U...............-.....-...............-..........-....A......A.......U..........U....A.....U....C.....U......C...............U.....C..........C...C.A..G.G...C.G...G..U.C...UcC....U..A.....................................................GA.C.C..G..C..C.UG..U..G...U..U.....C....U......U......U......C.....U........A...A..C...U...UC......U..U.C.......U..A..U.CC....UC..U..C.....A....U.....A..G....A...A....A...UA.UU.--......................................................----..-..-.-.---.-..-
   NC_004757.1       CUG.UU.GA..GC.UGG.UCA.U..G.G..C..GCUC..GAA.GAAGAGUUCGA.AUGC.GAAA.U.UC.CUGA.UGAGCAAGCUGAAAAAAUCAAU.A..CGGU...U...C.A...................................................GG.AA..G.CG.A..UCG.A..UUUCG.........U..-.....A.G......C..A...G...C......C....A...A.........C....G....C....A...............G.....C...............U..........C....A......G.......U..........A....A.....A....A.....A......C...............A....gU..........U...U.U..U.U...C.A...A..U.G...A.U....U..-.....................................................CA.U.U..G..G..A.GU..C..G...U..U.....U....U......G......U......C.....C........A...A..A...C...GU......A..-.-.......-..-..-.--....--..-..-.....-....-.....-..-....-...-....-...--.--.--......................................................----..-..-.-.---.-..-
   NC_005027.1       CUG.UU.GA..AU.UGG.UGA.U..G.G..A..GCUC..GAA.GAAGAGUUCGA.CAUC.AGCA.U.UC.CAGA.UGACUCCGCCGAAAAGAUCCAA.A..AGGU...C...G.G...................................................CG.AA..G.CA.A..UCG.A..UUUCA.........U..C....gA.A......A..A...G...G......A....A...A.........A....A....G....G...............C.....G...............A..........A....G......A.......C..........G....C.....C....U.....A......G...............U.....U..........U...-.-..-.-...-.-...-..-.-...-.-....U..C.....................................................--.-.-..-..-..-.--..G..G...U..G.....-....-......-......-......A.....A........C...C..U...G...UU......U..G.U.......U..G..G.AC....AA..A..-.....-....-.....-..-....-...U....U...CA.CU.UC......................................................GUCC..A..A.U.AGC.A..G
   NC_005042.1       CUG.UU.GA..GC.UUG.UUA.U..G.G..C..AUUA..GAA.GAAGCCUUCGA.UAUC.GAAA.U.UC.CUGA.CGAGGCUGCGGAAGGCAUAACC.A..CUGU...U...G.G...................................................AG.AU..G.CC.G..UUA.A..GUACA.........U..A.....G.A......A..G...A...C......A....A...G.........C....A....G....U...............C.....-...............-..........-....-......U.......U..........G....A.....G....G.....A......U...............C.....U..........A...A.U..G.A...U.G...G..A.G...A.A....-..A.....................................................CU.C.C..A..U..C.G-..A..G...U..U.....G....U......C......A......U.....U........A...C..U...G...GU......C..U.C.......G..G..C.GC....UA..U..U.....-....-.....-..-....-...-....-...--.--.--acgccuauu.................................ggcaauaccg..UCGC..A..-.-.---.-..-
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   NZ_LR778175.1     CUG.UA.GA..GC.UCG.UGA.U..G.G..C..ACUA..GAG.GAAGCUUUUGA.AUGC.GAAA.U.UC.CUGA.UGAGGAAGCAGAAAAAAUUUCU.A..CAGU...U...C.A...................................................GG.AA..G.CA.A..UUG.A..UUAUA.........U..U.....A.A......A..G...A...G......U....G...U.........C....A....A....G...............A.....U...............A..........A....A......U.......A..........A....A.....A....U.....A......U...............A.....G..........G...C.C..G.U...G.C...A..G.U...A.A....U..C.....................................................A-.-.G..U..G..C.GG..C..C...U..U.....U....U......U......U......C.....U........U...U..U...U...UU......A..G.U.......U..U..A.GU....AA..U..A.....U....U.....A..A....A...A....G...CC.AU.UG......................................................AUC-..A..A.U.AGA.A..G
   NZ_LS483343.1     UAA.UG.GA..AU.UUA.UUA.U..U.A..G..UCUG..GAA.GAUGAAUAUCA.UCUU.GAUA.U.UC.CAGA.CGAAGAGGUGGAAAACAUG---.-..----...-...-.-gagagu.....................................uuggguc.--.AG..A.UG.G..UCG.A..UUAUC.........U..C.....U.A......U..C...A...A......A....A...A.........C....U....C....G...............C.....C...............U..........A....A......A.......-..........-....-.....-....-.....-......-...............-.....-..........-...C.G..U.U...C.G...A..U.A...-.-....-..A.....................................................AA.U.C..G..A..A.CG..U..U...U..U.....U....U......U......G......C.....U........A...U..C...U...U-......-..-.-.......-..U..U.AA....CA..-..A.....A....G.....U..U....U...G....U...AA.AC.CG......................................................UUGA..A..U.U.UUA.G..A
   NZ_LS483422.1     CAG.UU.GA..GC.UAG.UUA.U..G.G..C..UCUG..GAA.GAAGAGUUCGA.UUGC.GAAA.U.CC.CUGA.CGAAGAAGCUGAAAAGAUCACG.A..CAGU...A...C.A...................................................GG.CU..G.CA.A..UUG.A..CUACG.........U..Cg..agA.A......C..-...G...C......A....U...C.........U....A....A....G...............U.....A...............A..........U....U......G.......U..........GauaaA.....U....C.....A......U...............G.....U..........C...U.A..G.G...C.G...A..U.C...A.C....U..C.....................................................GA.U.C..G..C..C.UA..U..G...U..U.....U....C......U......-......-.....-........-...-..-...-...--......-..-.-.......-..U..U.UG....UA..A..-.....-....-.....U..A....U...U....U...CC.CU.CC......................................................UAGG..A..G.G.AUA.U..G
   NZ_LS483429.1     CAG.UU.GA..AU.UAG.UAA.U..G.G..C..UUUA..GAA.GAAGAAUUUGA.UAUU.GAAA.U.UC.CUGA.UGAAGAAGCUGAAAAAAUUACC.A..CUGU...U...C.A...................................................AU.CU..G.CG.A..UUG.A..UUACG.........U.gCa...aA.A......C..A...A...U......C....A...A.........U....A....A....U...............U.....U...............U..........A....A......G.......U..........-....-.....-....-.....-......-...............-.....-..........-...U.G..G.G...C.G...A..CgU...U.U....U..A.....................................................AG.U.C..G..C..C.UA..A..U...U..U.....U....U......U......U......U.....C........U...A..A...U...AA......U..C.C.......U..C..U.UU....AA..A..A.....-....U.....U..A....-...-....-...-C.CG.CA......................................................----..-..-.-.---.-..-
   NZ_LS483443.1     CUG.UU.GA..AU.UAG.UUA.U..G.G..C..UUUA..GAA.GAAGAAUUCGA.UAUC.GAAA.U.UC.CAGA.UGAAGAAGCUGAAAAAAUCACA.A..CAGU...U...C.A...................................................AU.CA..G.CA.A..UUG.A..UUACG.........U..U.....C.A......A..A...A...C......A....A...U.........C....A....A....U...............A.....A...............U..........U....G......A.......U..........U....U.....U....C.....U......A...............A.....U..........U...U.A..G.G...C.G...G..U.U...U.U....U.aU.....................................................AA.C.C..G..C..C.UA..A..A...U..U.....U....U......A......U......C.....U........A...G..C...-...--......C..U.C.......A..-..-.--....--..-..-.....G....C.....G..U....A...U....U...CC.CU.CC......................................................AUAA..A..-.A.AAC.G..C
   NZ_LS483458.1     CAG.UU.GA..AU.UAG.UAA.U..G.G..C..UUUA..GAA.GAAGAAUUCGA.UAUC.GAAA.U.UC.CAGA.UGAAGAAGCUGAAAAAAUCACA.A..CUGU...U...C.A...................................................AU.CU..G.CG.A..UUG.A..CUACG.........U.gC.....A.A......-..-...-...-......A....A...C.........A....A....U....C...............A.....A...............U..........A....A......U.......U..........U....C.....A....A.....G......-...............-.....-..........U...U.G..G.G...C.G...A..C.U...U.U....U.uA.....................................................AG.U.C..G..C..C.UA..A..U...U..U.....U....U......U......U......C.....A........A..aA..A...U...UU......C..U.U.......U..C..U.AA....CA..U..C.....A....C.....C..G....C...A....-...--.--.--......................................................----..-..-.-.---.-..-
   NZ_LS483470.1     CUG.UU.GA..GC.UGG.UUA.U..G.G..C..UCUG..GAA.GAAGAGUUUGA.UACU.GAGA.U.UC.CAGA.CGAAGAAGCAGAGAAGAUUACC.A..CUGU...U...C.A...................................................AG.CG..G.CA.A..UUG.A..UUACA.........U..C.....A.-......C..G...G...C......U....G...C.........U....A...aC....G...............C.....G...............U..........A....A......U.......C..........A....G.....A....C.....A......Uau...........cuA.....U..........C...U.A..G.G...C.G...G..U.C...A.U....U..C.....................................................GA.C.C..G..C..C.UA..A..G...U..U.....U....U......C......U......C.....A........U...U..U...C...UA......A..U.A.......A..C..A.AG....--..-..-.....-....U.....C..A....U...U....C...CC.CC.CU......................................................CUGG..A.gG.A.UUC.A..A
   NZ_LS483476.1     UAG.UU.GA..AC.UUG.UUA.U..G.G..A..AUUA..GAA.GAUGAGUUUGA.UAUG.GAAAuU.UC.CGA-.UGAUGACGCUGAGAAAAUUGCU.A..CAGU...U...-.-ggcga.......................................cguugu.AA.AU..U.AC.A..UAA.A..AGAGA.........A..A.....A.A......C..U...A...G......U....C...G.........U....U....G....G...............A.....G...............U..........A....A......G.......A..........-....A.....A....C.....A......G...............G.....U..........C...C.C..G.U...U.G...G..U.-...-.-....-..-.....................................................AA.U.C..G..A..C.GG..G..G...C..U.....U....U......-......-......-.....U........C...U..A...U...GU......C..A.A.......A..U..A.AC....--..-..C.....A....U.....U..-....-...-....-...--.--.--uca..............................................agg..GUGG..A..U.A.ACA.C..A
   NZ_LS991421.1     UUG.UC.GA..AU.UUG.UUU.U..G.G..A..ACUC..GAA.GAUGCAUUCGG.CGCG.GAAA.U.UC.CAGA.UGACGAUGCGGAAAAGAUCCAA.A..CAGU...U...C.A...................................................AG.AU..G.CG.G..UUG.A..UUACA.........U..C.....A.A......A..G...C...A......C....A...U.........C....A....A....A...............A.....A...............U..........-....A......G.......U..........G....A.....A....U.....G......C...............G.....-..........U...G.A..G.C...U.G...C..C.A...G.U....G..A.....................................................UG.G.C..G..G..C.UU..-..-...U..U.....U....U......A......U......U.....U........G...U..G...A...GC......G..C.G.......-..-..-.--....--..-..-.....-....-.....-..-....-...-....-...--.--.--uuaugg........................................ugagcg..----..-..C.G.ACU.C..A
   NZ_LT615367.1     CUG.UU.GA..AC.UGG.UAA.U..G.G..C..AUUG..GAA.GAAGAAUUCGA.UACC.GAGA.U.CC.CAGA.CGAAGAAGCUGAAAAAAUCACA.A..CUGU...U...C.A...................................................GG.CA..G.CU.A..UUG.A..UUUCA.........U..U.....C.A......G..G...C...U......A....A...U.........C....A....G....C...............A.....G...............U..........A....A......U.......C..........G....G.....A....C.....A......U...............A.....U..........C...U.A..G.G...C.G...G..U.C...G.U....C..C.....................................................GA.C.C..G..C..C.UA..A..G...U..U.....U....-......-......-......-.....-........U...C..U...U...CU......A..C.C.......-..U..C.AG....AA..U..C.....A....U.....U..U....U...U....U...CC.CU.CC......................................................CUGG..A..G.G.AUA.A..G
   NZ_LT897836.1     CCG.UU.GA..GU.UAG.UAA.U..G.G..C..GCUG..GAA.GAAGAGUUCGA.UACC.GAAA.U.UC.CAGA.CGAAGAAGCUGAGAAAAUCACU.A..CUGU...G...C.A...................................................GG.CA..G.CA.A..UUG.A..UUUCA.........U..-.....-.A......C.aG...G...C......A....A..gU.........C....A....G....C...............A.....G...............U..........A....A......G.......U..........G....A.....A....C.....U......U...............U.....U..........C...U.A..G.G...C.G...G..U.C...U.U....A.gU.....................................................GA.C.C..G..C..C.UA..A..-...-..-.....-....-......-......-......-.....-........-...U..U...U...UU......A..G.U.......A..U..C.AU....GG..U..A.....A....A.....C..U....G...C....U...AC.CC.CC......................................................-UGG..A..G.G.AAA.A..A
   NZ_LT906447.1     UCG.CU.GA..AU.UAG.UGA.U..G.G..A..AUUA..GAA.GAUGAAUUCGG.UACU.GAAA.U.CC.CUGA.UGAAGAAGCUGAAAAAAUCAAU.A..CAGU...U...G.G...................................................UG.AC..G.CA.G..UUA.A..UUUCA.........U..C.....A.A......C..A...A...C......C....U...U.........G....A....U....A...............A.....A...............U..........A....A......U.......-..........G....A.....A....A.....A......U...............A.....Uua......ucU...G.A..G.U...C.G...U..C.U...C.U....U..U.....................................................CA.G.C..G..A..C.UC..A..G...A..U.....U....U......U......U......C.....U........U...U..U...G...UU......U..U.A.......A..-..-.--....-G..A..C.....A....A.....A..U....U...-....-...--.--.--cac.............................................guaa..---A..A..U.G.AGU.A..A
   NZ_LT906448.1     CAG.UU.GA..AU.UAG.UAA.U..G.G..C..UUUA..GAA.GAAGAAUUUGA.UAUU.GAAA.U.UC.CAGA.UGAAGAAGCUGAAAAAAUCACA.A..CAGU...U...C.A...................................................AU.CU..G.CG.A..UUG.A..UUACG........uU..C.....A.A......-..-...-...-......A....A...C.........A....A....U....C...............A.....A...............U..........A....A......U.......U..........-....-.....-....U.....U......U...............A.....U..........U...U.A..G.G...C.G...A..U.G...A.A....A..U.....................................................CA.U.C..G..C..C.UA..A..A...U..U.....U....U......U......U......C.....U........C...U..U...U...UU......G..-.-.......-..-..-.--....--..-..-.....-....-.....-..-....-...-....-...--.--.--......................................................----..-..-.-.---.-..-
   NZ_LT906460.1     UUG.CU.GA..AU.UAG.UAA.U..G.G..A..AUUA..GAA.GACGAGUUUGG.UACU.GAAA.U.UC.CUGA.UGAAGAAGCUGAAAAAAUCAAC.A..CUGU...U...G.G...................................................UG.AU..G.CU.G..UUA.A..UUUUA.........U..U.....A.A......C..A...G...U......C....U...U.........G....A....A....A...............A.....A...............U..........AauaaA......U.......U..........A....A.....A....C.....A......U...............C.....U..........-...G.G..G.U...C.G...A..U.A...G.A....A..U.....................................................UG.U.C..G..G..C.UC..A..G...U..U.....U....U......U......U......U.....C........U...U..U...-...--......-..-.-.......-..-..-.--....--..-..-.....-....-.....-..-....-...-....-...--.--.--......................................................----..-..-.-.---.-..-
   NZ_LT906462.1     UCG.CU.GA..AU.UAG.UUA.U..G.G..A..AUUA..GAA.GAUGAAUUUGA.UAUG.GAAA.U.CC.CUGA.UGAGGAAGCAGAAAAAAUCAAC.A..CUGU...U...-.-ggug.........................................acgcu.GU.--..U.AA.A..UAU.A..UUGAA.........U..C.....A.U......U.aG...A...A......A....A...A.........U....A....A....U...............U.....C...............U..........A....A......G.......U..........U....A.....C....A.....A......U...............C.....G..........-...C.C..C.A...U.A...G..A.C...A.U....A..G.....................................................GU.C.U..A..U..G.GG..A..U...U..U.....U....U......U......U......G.....C........U...U..U...U...AC......A..U.A.......A..C..A.UU....--..-..-.....-....-.....-..-....-...-....-...--.--.--......................................................----..-..-.-.---.-..-
   NZ_LT906463.1     CAG.UU.GA..AU.UGG.UAA.U..G.G..C..UUUA..GAA.GAAGAAUUCGA.UAUC.GAAA.U.UC.CUGA.UGAAGAAGCUGAAAAAAUCACA.A..CUGU...U...C.A...................................................AU.CU..G.CG.A..UUG.A..CUACG........uU..C.....A.A......-..A...A...C......A....A...U.........C....A....-....-...............-.....A...............U..........A....A......U.......U..........-....-.....-....U.....C......U...............G.....G..........C...A.A..G.G...C.G...G..U.U...U.U....A..A.....................................................AA.C.C..G..C..C.UU..U..C...U..U.....U....U......A......U......A.....A........U...C..U...C...CU......C..C.C.......U..C..U.UC....CC..C..U.....C....A.....A..A....C...U....U...C-.--.--......................................................----..-..-.-.---.-..-
   NZ_LT906464.1     UCG.CA.GA..AU.UAG.UGA.U..G.G..A..AUUA..GAA.GAUGAAUUCGG.UACA.GAAA.U.UC.CGGA.UGAAGAAGCGGAAAAAAUCAAU.A..CAGU...A...G.G...................................................CG.AC..G.CU.G..UUA.A..UUUCA.........U..U.....A.A......U..A...C...A......C....U...U.........G....A....A....A...............A.....A...............U..........A....A......U.......U..........G....U.....U....U.....U......C...............A.....U..........C...U.G..A.G...C.C...G..A.U...U.U....G..U.....................................................GU.C.G..G..C..U.CA..G..A...U..U.....U....U......U......U......A.....C........U...A..U...A...UG......U..A.U.......U..U..U.UG....AA..U..C.....A....U.....G..-....-...-....-...--.--.--......................................................----..-..-.-.---.-..-
   NZ_LT906479.1     CCG.UU.GA..GC.UGG.UAA.U..G.G..C..ACUG..GAA.GAAGAAUUCGA.CACU.GAGA.U.UC.CAGA.CGAAGAAGCUGAGAAGAUCACU.A..CUGU...U...C.A...................................................GG.CA..G.CU.A..UUG.A..UUUCA.........U..C.....A.A......C..G...C...U......A....G...C.........C....A....G....C...............A.....G...............U..........A....A......G.......A..........G....A.....A....C.....A......U...............A.....U..........C...U.A..G.G...C.G...G..U.C...A.C....U..C.....................................................GA.C.C..G..C..C.UA..A..G...U..U.....U....-......-......-......-.....-........-...U..U...U...CU......A..U.C.......C..C..U.AG....UG..U..C.....A....U....aU..U....U...U....U...CC.CU.CC......................................................UUGG..A..G.G.ACA.A..A
   NZ_LT906482.1     UGG.UU.GA..GC.UGG.UAA.U..G.G..C..UUUG..GAA.GAAGCUUUCGG.CUGC.GACA.U.CC.CCGA.UGAAGAAGCUGAAAAAAUCACU.A..CCGU...U...C.A...................................................AC.AA..G.CC.A..UUG.A..CUUCG.........U..U.....A.-......-..-...-...C......U....U...C.........C....C....G....C...............U.....C...............C..........A....A......C.......U..........A....A.....U....C.....G......G...............C.....A..........G...C.A..G.-...-.-...G..U.-...-.-....U..U.....................................................-A.A.C..A..G..C.AG..A..A...U..A.....U....C......A......G......C.....C........-...U..C...U...GC......C..C.C.......G..-..G.CG....--..-..-.....-....-.....C..A....U...U....U...CC.CG.CC......................................................---A..A..G.G.GCA.G..G
   NZ_OU594967.1     CUG.UU.GA..GC.UGG.UGA.U..G.G..C..UCUG..GAA.GAAGAGUUUGA.UACU.GAGA.U.UC.CAGA.UGAAGAAGCUGAAAAAAUCACU.A..CCGU...U...C.A...................................................AA.CA..G.CU.A..UUG.A..UUACA.........U..U.....C.U......U..G...C...U......A....A...U.........C....A....A....G...............A.....C...............U..........A....A......U.......C..........U....U.....-....C.....U......A...............A.....A..........A...C.A..G.G...C.A...G..U.U...-.-....-..U.....................................................GA.C.U..G..C..C.UG..U..-...U..U.....U....G......A......U......C.....U........C...-..-...-...-A......C..U.C.......-..U..U.UA....UU..U..C.....G....U.....A..U....U...C....C...CA.UU.UC......................................................UGGA..G..G.C.UAA.U..C


   Structure         (((.((.((.........(((.(..(.(..(..((((..(((.....(((......)))......).)).)))).....................((.....................................................................)).....).)).)..)))..................)..).....).)......)..)...)..............................................................................................................................................................................................(.(..(.(...(.(...(..(.(...................................................................)).).)..)..)..).))...............................................................(..(...(...((.........(.(..........(..(.((...............................................................................................................)))).....).).))).)..)


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sraB-rpmF-plsX-fabH-fabD-fabG-acpP-fabF-yceD



Position: 5157-5331, Conformation: #0







97% 90% 75% 50% Nucleotide present N N N Nucleotide identify E < 0.1 Base-pair covariation E < 0.05 Helix-level covariation 97% 90% 75%

Y G U Y G A R Y U R G U A U G G Y U G A A G A R G A R U U Y G R Y R Y G A R A U Y C C G A Y G A R G A G C G A R A A R A U Y R A C G U R G G C R U Y R A U A Y R U Y R A R R R R A 5'