sraB-rpmF-plsX-fabH-fabD-fabG-acpP-fabF-yceD



Position: 4437-4546, Conformation: #0







DMS reactivity > 1.0 0.0 0.4 0.7 G/U/No data
Position: 0 (position.label in template: 0.5')5' Position: 1 (position.label in template: 1.U) Reactivity: nanU Position: 2 (position.label in template: 2.C) Reactivity: nanC Position: 3 (position.label in template: 3.U) Reactivity: nanU Position: 4 (position.label in template: 4.G) Reactivity: nanG Position: 5 (position.label in template: 5.U) Reactivity: nanU Position: 6 (position.label in template: 6.U) Reactivity: nanU Position: 7 (position.label in template: 7.U) Reactivity: nanU Position: 8 (position.label in template: 8.U) Reactivity: nanU Position: 9 (position.label in template: 9.C) Reactivity: nanC Position: 10 (position.label in template: 10.C) Reactivity: nanC Position: 11 (position.label in template: 11.G) Reactivity: nanG Position: 12 (position.label in template: 12.U) Reactivity: nanU Position: 13 (position.label in template: 13.C) Reactivity: nanC Position: 14 (position.label in template: 14.U) Reactivity: nanU Position: 15 (position.label in template: 15.G) Reactivity: nanG Position: 16 (position.label in template: 16.U) Reactivity: nanU Position: 17 (position.label in template: 17.C) Reactivity: nanC Position: 18 (position.label in template: 18.A) Reactivity: nanA Position: 19 (position.label in template: 19.A) Reactivity: nanA Position: 20 (position.label in template: 20.A) Reactivity: nanA Position: 21 (position.label in template: 21.A) Reactivity: nanA Position: 22 (position.label in template: 22.G) Reactivity: nanG Position: 23 (position.label in template: 23.C) Reactivity: nanC Position: 24 (position.label in template: 24.G) Reactivity: nanG Position: 25 (position.label in template: 25.G) Reactivity: nanG Position: 26 (position.label in template: 26.U) Reactivity: nanU Position: 27 (position.label in template: 27.A) Reactivity: nanA Position: 28 (position.label in template: 28.A) Reactivity: nanA Position: 29 (position.label in template: 29.U) Reactivity: nanU Position: 30 (position.label in template: 30.G) Reactivity: nanG Position: 31 (position.label in template: 31.C) Reactivity: nanC Position: 32 (position.label in template: 32.G) Reactivity: nanG Position: 33 (position.label in template: 33.C) Reactivity: 1C Position: 34 (position.label in template: 34.G) Reactivity: nanG Position: 35 (position.label in template: 35.C) Reactivity: 0C Position: 36 (position.label in template: 36.U) Reactivity: nanU Position: 37 (position.label in template: 37.A) Reactivity: 0A Position: 38 (position.label in template: 38.U) Reactivity: nanU Position: 39 (position.label in template: 39.G) Reactivity: nanG Position: 40 (position.label in template: 40.A) Reactivity: 0A Position: 41 (position.label in template: 41.U) Reactivity: nanU Position: 42 (position.label in template: 42.G) Reactivity: nanG Position: 43 (position.label in template: 43.A) Reactivity: 0A Position: 44 (position.label in template: 44.A) Reactivity: 1A Position: 45 (position.label in template: 45.A) Reactivity: 0A Position: 46 (position.label in template: 46.A) Reactivity: 1A Position: 47 (position.label in template: 47.A) Reactivity: 0A Position: 48 (position.label in template: 48.G) Reactivity: nanG Position: 49 (position.label in template: 49.C) Reactivity: 0C Position: 50 (position.label in template: 50.G) Reactivity: nanG Position: 51 (position.label in template: 51.U) Reactivity: nanU Position: 52 (position.label in template: 52.C) Reactivity: 0C Position: 53 (position.label in template: 53.A) Reactivity: 0A Position: 54 (position.label in template: 54.U) Reactivity: nanU Position: 55 (position.label in template: 55.G) Reactivity: nanG Position: 56 (position.label in template: 56.G) Reactivity: nanG Position: 57 (position.label in template: 57.U) Reactivity: nanU Position: 58 (position.label in template: 58.C) Reactivity: 0C Position: 59 (position.label in template: 59.G) Reactivity: nanG Position: 60 (position.label in template: 60.U) Reactivity: nanU Position: 61 (position.label in template: 61.A) Reactivity: 0A Position: 62 (position.label in template: 62.U) Reactivity: nanU Position: 63 (position.label in template: 63.U) Reactivity: nanU Position: 64 (position.label in template: 64.A) Reactivity: 0A Position: 65 (position.label in template: 65.U) Reactivity: nanU Position: 66 (position.label in template: 66.C) Reactivity: 0C Position: 67 (position.label in template: 67.A) Reactivity: 0A Position: 68 (position.label in template: 68.C) Reactivity: 0C Position: 69 (position.label in template: 69.U) Reactivity: nanU Position: 70 (position.label in template: 70.A) Reactivity: 1A Position: 71 (position.label in template: 71.U) Reactivity: nanU Position: 72 (position.label in template: 72.C) Reactivity: 0C Position: 73 (position.label in template: 73.G) Reactivity: nanG Position: 74 (position.label in template: 74.G) Reactivity: nanG Position: 75 (position.label in template: 75.U) Reactivity: nanU Position: 76 (position.label in template: 76.U) Reactivity: nanU Position: 77 (position.label in template: 77.C) Reactivity: 0C Position: 78 (position.label in template: 78.U) Reactivity: nanU Position: 79 (position.label in template: 79.G) Reactivity: nanG Position: 80 (position.label in template: 80.U) Reactivity: nanU Position: 81 (position.label in template: 81.G) Reactivity: nanG Position: 82 (position.label in template: 82.G) Reactivity: nanG Position: 83 (position.label in template: 83.U) Reactivity: nanU Position: 84 (position.label in template: 84.U) Reactivity: nanU Position: 85 (position.label in template: 85.G) Reactivity: nanG Position: 86 (position.label in template: 86.G) Reactivity: nanG Position: 87 (position.label in template: 87.U) Reactivity: nanU Position: 88 (position.label in template: 88.A) Reactivity: 0A Position: 89 (position.label in template: 89.C) Reactivity: 0C Position: 90 (position.label in template: 90.C) Reactivity: 0C Position: 91 (position.label in template: 91.A) Reactivity: 0A Position: 92 (position.label in template: 92.U) Reactivity: nanU Position: 93 (position.label in template: 93.G) Reactivity: nanG Position: 94 (position.label in template: 94.G) Reactivity: nanG Position: 95 (position.label in template: 95.G) Reactivity: nanG Position: 96 (position.label in template: 96.A) Reactivity: 0A Position: 97 (position.label in template: 97.A) Reactivity: 0.5A Position: 98 (position.label in template: 98.A) Reactivity: 0.5A Position: 99 (position.label in template: 99.U) Reactivity: nanU Position: 100 (position.label in template: 100.G) Reactivity: nanG Position: 101 (position.label in template: 101.G) Reactivity: nanG Position: 102 (position.label in template: 102.C) Reactivity: 0C Position: 103 (position.label in template: 103.G) Reactivity: nanG Position: 104 (position.label in template: 104.G) Reactivity: nanG Position: 105 (position.label in template: 105.U) Reactivity: nanU Position: 106 (position.label in template: 106.C) Reactivity: 0C Position: 107 (position.label in template: 107.A) Reactivity: 0A Position: 108 (position.label in template: 108.G) Reactivity: nanG Position: 109 (position.label in template: 109.G) Reactivity: nanG Position: 110 (position.label in template: 110.C) Reactivity: 0C Position: 111 (position.label in template: 111.C) Reactivity: 0C Position: 112 (position.label in template: 112.A) Reactivity: 0.5A Position: 113 (position.label in template: 113.A) Reactivity: 0A Position: 114 (position.label in template: 114.C) Reactivity: 0C Position: 115 (position.label in template: 115.U) Reactivity: nanU Position: 116 (position.label in template: 116.A) Reactivity: 1A Position: 117 (position.label in template: 117.C) Reactivity: 0C Position: 118 (position.label in template: 118.G) Reactivity: nanG Position: 119 (position.label in template: 119.C) Reactivity: 0C Position: 120 (position.label in template: 120.U) Reactivity: nanU Position: 121 (position.label in template: 121.G) Reactivity: nanG Position: 122 (position.label in template: 122.C) Reactivity: nanC Position: 123 (position.label in template: 123.G) Reactivity: nanG Position: 124 (position.label in template: 124.G) Reactivity: nanG Position: 125 (position.label in template: 125.C) Reactivity: nanC Position: 126 (position.label in template: 126.G) Reactivity: nanG Position: 127 (position.label in template: 127.A) Reactivity: nanA Position: 128 (position.label in template: 128.A) Reactivity: nanA Position: 129 (position.label in template: 129.A) Reactivity: nanA Position: 130 (position.label in template: 130.G) Reactivity: nanG Position: 131 (position.label in template: 131.C) Reactivity: nanC Position: 132 (position.label in template: 132.G) Reactivity: nanG Position: 133 (position.label in template: 133.G) Reactivity: nanG Position: 134 (position.label in template: 134.G) Reactivity: nanG Position: 135 (position.label in template: 135.C) Reactivity: nanC Position: 136 (position.label in template: 136.U) Reactivity: nanU Position: 137 (position.label in template: 137.U) Reactivity: nanU Position: 138 (position.label in template: 138.G) Reactivity: nanG Position: 139 (position.label in template: 139.A) Reactivity: nanA Position: 140 (position.label in template: 140.U) Reactivity: nanU Position: 141 (position.label in template: 141.C) Reactivity: nanC Position: 142 (position.label in template: 142.G) Reactivity: nanG Position: 143 (position.label in template: 143.G) Reactivity: nanG Position: 144 (position.label in template: 144.C) Reactivity: nanC Position: 145 (position.label in template: 145.U) Reactivity: nanU Position: 146 (position.label in template: 146.U) Reactivity: nanU Position: 147 (position.label in template: 147.C) Reactivity: nanC Position: 148 (position.label in template: 148.A) Reactivity: nanA Position: 149 (position.label in template: 149.G) Reactivity: nanG Position: 150 (position.label in template: 150.U) Reactivity: nanU Position: 151 (position.label in template: 151.3')3' 10 20 30 50 100


sraB-rpmF-plsX-fabH-fabD-fabG-acpP-fabF-yceD



Position: 4437-4546, Conformation: #0







Retained alignments:


   NC_002570.2       CC.A...C.....U...G.....U.......U.......C..G............A............A.AG....C.U....G.UU..A.CA.C.G....A.C..C..G.A.U.G..A.UG.AA....G.C..A..G........................................................CG.G.UU...U...G.GG...CGA.A.U.CAU.uA.A...CG...UA....U...C...G....-UC...U..GUUGU.U...G.GU.................GC...C.A.U.U.GGG...AAU....GCU.G.G.A..C.AAGCG.A.....ACUA.U.GUUGCG.......................................GCC.AAAG.C.A........GG...U.GUCAUUG
   NC_002977.6       CC.G...U.....C...U.....A.......C.......C..G............C............A.-U....G.A....G.CA..A.GG.C.U....U.G..C..C.-.-.-..-.--.--....-.-..-..-ucaaaggcaugau...........................gaaggcccguacc...--.-.--...-...G.GC...CGC.A.U.UGU..C.A...AC...AU....C...A...C....UUC...G..GUCGU.G...G.GG.................UU...G.A.C.C.GGU...AAU....GCC.G.G.G..C.AGACC.A.....ACUA.U.GCGGCG.......................................GCC.AAGG.C.C........GG...U.AUCAUCG
   NC_003361.3       UU.A...C.....G...U.....G.......U.......G..U............U............C.GG....C.C....G.UA..A.UU.C.G....U.U..C..U.A.U.G..A.UU.AA....A.G..C..U........................................................CG.U.UC...U...G.GU...UCC.A.U.AAU..C.A...AC...AU....U...A...G....UUC...U..AUUGU.U...G.GU.................UU...A.A.U.G.GGU...AGU....CCA.G.G.A..C.AAACU.A.....ACUA.U.GCCGCU.......................................GCA.AAAG.C.U........GG...U.AUUAUAG
   NC_003910.7       UA.A...A.....G...U.....A.......A.......G..C............A............A.AG....C.U....G.CU..A.UU.C.G....U.C..C..U.A.U.G..A.UG.AA....G.A..A..A........................................................CG.U.AC...A...G.GC...CGU.A.U.CAU..C.A...AU...AU....U...G...G....CUC...U..GUUGU.A...G.GU.................AC...C.A.U.G.GGU...AAU....GCU.G.G.C..C.AAGUU.A.....ACUA.U.GCAACA.......................................GCU.AAAG.C.G........GG...U.UUAUUAG
   NC_004347.2       CA.G...A.....C...U.....A.......U.......C..A............A............A.AC....C.U....G.UG..A.UG.C.G....U.A..C..C.A.U.G..A.UG.AA....A.A..A..G........................................................CG.C.UU...U...G.GC...CGG.A.U.CAU..C.A...AU...AU....C...G...G....UUC...A..GUGGU.A...G.GC.................AC...U.A.U.G.GGC...AAU....GCA.G.G.U..C.AAGUU.A.....ACUA.C.UCGGCA.......................................GCA.AAGG.C.G........GG...U.UUGAUCG
   NC_004556.1       UC.G...U.....A...C.....C.......A.......G..C............A............G.GG....C.G....G.UG..G.UU.C.G....C.A..A..C.A.U.G..A.UG.AA....G.G..C..G........................................................CG.C.AA...G...G.GC...CGU.A.U.CAU..C.A...AC...AU....U...G...C....UUC...G..GUUGU.U...G.GC.................GU...G.A.C.U.GGU...AAU....GCC.G.G.U..C.AGGCA.A.....ACUA.U.GCUGCG.......................................GCC.AAAG.C.U........GG...U.GUGAUUG
   NC_004578.1       CC.G...U.....C...U.....U.......U.......C..C............A............A.GG....G.U....G.UU..C.UG.C.G....C.G..G..C.A.U.G..A.CC.AA....A.G..C..G........................................................CG.U.UG...G...G.GA...CGA.A.U.UAU..C.A...GC...AU....U...G...G....UUC...G..GUUGU.G...G.GU.................GC...C.A.U.G.GGC...AAC....GCC.G.G.U..C.AAGUA.A.....ACUA.U.GCUUCC.......................................GCG.AAGG.C.C........GG...G.CUGGAAG
   NC_004603.1       CC.G...U.....A...U.....G.......U.......C..U............A............A.AG....C.G....G.UU..C.UG.C.G....U.G..G..C.A.U.G..A.UG.AA....A.A..A..A........................................................CG.C.GC...G...G.GU...CGU.A.U.CAU..C.A...AC...GU....A...G...G....UUC...U..GUUGU.A...G.GC.................AC...U.A.U.G.GGU...AAU....GCG.G.G.U..C.AAACU.A.....ACUA.C.GCAGCA.......................................GCA.AAAG.C.G........GG...C.GUGAUUG
   NC_004757.1       CU.G...U.....C...U.....C.......A.......G..U............C............G.UG....C.C....G.UA..C.UG.C.G....C.A..C..C.A.U.G..A.UG.AA....A.G..C..A........................................................CG.C.AG...C...G.GU...CGG.A.U.CAU..C.A...AU...AU....C...U...C....AUC...A..GUAGU.G...G.GC.................GC...A.A.C.C.GGA...AAU....CCU.G.G.A..C.AAACC.A.....ACUA.U.GCAGCG.......................................GCC.AAGG.C.U........GG...G.AUGAUCG
   NC_005070.1       GU.G...C.....-...-.....-.......-.......-..A............G............C.CG....C.G....C.UG..U.CG.C.A....CgG..C..C.G.A.U..G.UU.--....-.-..-..-gaa..............................................gcag...AA.A.AG...C...G.GC...CGC.A.U.CAU..C.A...AC...AU....C...A...C....CUC...C..GUGGU.G...G.GG.................CU...G.A.U.G.GGG...AAU....GCC.G.G.U..C.AGGCC.A.....AUUA.C.GCCGCU.......................................GCC.AAGG.C.C........GG...U.GUGAUCG
   NC_005126.1       CC.G...U.....A...U.....G.......A.......C..A............A............A.AG....C.G....G.CA..A.UG.C.G....C.U..U..C.A.U.G..A.UA.AA....A.A..A..A........................................................CG.U.UA...U...G.GU...CGU.A.U.CAU..C.U...CU...AU....U...G...G....UUC...U..GUUGU.U...G.GA.................UC...G.A.U.G.GGG...AAC....GCU.G.G.G..C.AGGCA.A.....GCUA.U.GCAGCG.......................................GCG.AAAG.CaG........GG...C.UUG-UUG
   NC_006510.1       UC.U...U.....U...G.....U.......A.......C..G............A............A.GG....C.G....G.CA..A.CG.C.G....C.C..C..G.A.U.G..A.UG.AA....G.C..A..G........................................................CG.C.UA...U...G.GG...CGG.A.U.CGU..C.A...AC...AU....U...G...C....UUC...G..GUCGU.C...G.GC.................GU...G.A.U.C.GGC...AAU....CCG.G.G.G..C.AGGCG.A.....ACUA.U.GUCGCC.......................................GCC.AAGG.C.C........GG...C.GUCAUCG
   NC_006512.1       AA.G...U.....U...U.....G.......U.......-..-............A............A.GG....C.G....G.UU..G.UA.C.G....C.G..G..C.A.U.G..A.UG.AA....G.C..G..G........................................................CG.U.AA...U...G.GC...CGU.A.U.UAU..U.A...AU...AU....C...A...G....UUC...A..GUUGU.U...G.GC.................AC...A.A.C.A.GGA...AAC....CCG.G.G.G..C.AGGUU.A.....ACUA.U.UGUGCG.......................................GCG.AAAG.C.C........GG...A.CUGGUUG
   NC_006513.1       CC.G...U.....A...U.....G.......U.......C..A............C............G.CC....U.G....G.UC..A.UG.C.G....C.-..-..-.-.-.-..-.--.--....-.-..-..-gggaugaugaag.............................gcgcgcggcggg...--.-.--...-...-.--...CGC.A.U.CAU..C.A...AC...AU....C...A...C....UUC...G..GUGGU.C...G.GC.................AG...C.G.C.C.GGC...AAU....CCG.G.G.A..C.AGGCA.A.....ACUA.U.GCGGCA.......................................GCA.AAGG.C.C........GG...A.GUGGCCG
   NC_006526.2       CC.G...U.....C...U.....U.......A.......G..C............C............G.UG....C.C....G.UC..A.UC.A.G....A.C..C..G.A.U.G..A.UG.AA....G.A..C..C........................................................CG.-.CU...U...U.GG...CCGcA.U.UAU..C.A...AU...AU....C...A...G....UUC...A..GUCGU.C...G.GC.................CA...G.A.C.C.GGU...AAU....GCC.G.G.A..C.AAGCC.A.....AUUA.U.GCUGCG.......................................GCA.AAGG.C.A........GG...C.AUGAUCG
   NC_007292.1       CC.G...U.....A...U.....G.......U.......C..C............A............A.AG....C.G....G.UA..A.UA.A.A....A.U..C..G.A.U.G..A.UA.AA....A.A..A..A........................................................CA.U.UA...U...G.GU...AGA.G.U.UAU..U.A...AU...AU....U...G...G....UUC...U..GUAGU.U...G.GU.................GU...U.G.U.G.GGU...AAU....CCC.G.G.G..C.AAUCA.A.....AUUA.U.UCGGCU.......................................GCU.AAAU.C.A........GG...A.UUGAUUG
   NC_007481.1       CC.G...U.....U...U.....A.......U.......C..U............A............A.GG....C.G....G.UA..U.UA.C.G....C.C..C..A.A.U.G..A.UG.AA....G.A..A..A........................................................AA.G.AA...C...G.GU...CGU.A.U.CAU..C.A...AU...AU....U...G...G....CUC...A..GUAGU.G...G.GC.................AC...U.A.U.G.GGU...AAU....GCU.G.G.G..C.AAGCU.A.....ACUA.U.GCAGCG.......................................GCU.AAAG.C.C........GG...U.GUUAUUG
   NC_007484.1       UC.G...U.....C...U.....C.......U.......C..A............A............A.AG....G.A....U.GU..C.UU.C.G....A.G..G..U.A.U.G..A.UG.AA....A.A..C..C........................................................CG.U.UG...G...G.GA...CGC.A.U.UAU..U.A...AC...AU....U...A...C....UUC...G..GUGAC.C...G.GU.................GU...A.A.U.G.GGA...AAU....GCC.G.G.A..C.AGACC.A.....AUUA.U.GCUGCC.......................................GCA.AAAG.C.G........GG...C.AUGAUAG
   NC_007510.1       GC.A...G.....CcgcU.....G.......C.......U..G............U............U.GC....C.G....A.UG..A.UC.C.G....C.A..C..-.-.-.-..-.--.--....-.-..-..-gcgg.............................................cgcg...--.-.--...-...-.GA...CGG.A.U.CGU..C.A...AC...AU....C...G...C....GUC...G..GUGGC.C...G.GC.................GU...G.A.C.C.GGC...AAU....CGC.G.G.G..C.AGGUC.A.....ACUA.C.GCGGCC.......................................GCG.AAGG.C.G........GG...G.CUGAUCG
   NC_007530.2       AU.G...U.....A...-.....-.......-.......C..G............A............A.GG....C.A....G.UA..U.CU.C.G....U.U..U..U.A.U.G..A.UG.CG....U.C..A..A........................................................CG.U.CA...U...G.GG...CGU.A.U.UGU..U.A...AU...AU....C...G...C....CUC...U..GUUGU.U...G.GA.................GU...A.A.C.G.GGU...AAU....CCA.G.G.A..C.AAGCA.A.....ACUA.U.GUUGCU.......................................GCU.AAAG.C.A........GG...U.GUAAUUG
   NC_007712.1       CC.G...C.....A...U.....G.......U.......C..G............A............A.AG....C.G....G.UA..A.UG.C.G....G.G..C..C.A.U.G..A.UG.AA....A.A..A..G........................................................CG.C.UA...U...G.GC...AGA.A.U.AAU..U.A...CC...AU....C...G...G....UUC...U..GUUGU.G...G.GC.................GC...C.A.U.U.GGU...AAU....GCC.G.G.G..C.AGGCA.A.....AUUA.U.GCUGCC.......................................GCC.AAGG.C.G........GG...C.CUGGUAG
   NC_007908.1       UC.G...C.....A...U.....G.......A......gC..C............G............U.GC....C.-....G.UC..A.UG.C.G....C.A..C..C.A.U.G..A.UG.AA....G.C..A..G........................................................CG.U.UA...U...G.GC...CGC.A.U.CAU..C.A...GC...AU....C...A...C....CUC...C..GUGGU.G...G.GU.................GC...C.U.C.A.GGC...AAC....CCG.G.G.G..C.AGGCC.A.....ACUA.C.GCCGCC.......................................GCC.AAGG.C.G........GG...C.GUGGCCG
   NC_007947.1       CC.G...G.....A...U.....G.......U.......C..G............C............A.AG....C.G....G.UG..C.UG.C.G....C.C..C..G.A.U.-..-.--.--....-.-..-..-gaugaag.......................................gcaagaa...--.-.-G...U...G.GC...CGU.A.U.CAU..C.A...AU...AU....C...U...C....UUC...G..GUGGU.A...G.GC.................CA...U.A.U.G.GGC...AAC....CCC.G.G.C..C.AGGCC.A.....ACUA.U.GCUGCG.......................................GCC.AAGG.C.C........GG...C.AUGGCAG
   NC_007951.1       CC.A...U.....C...C.....G.......U.......U..G............Ac..........cA.UG...cC.G....A.UG..G.UG.C.G....G.G..C..C.-.-.-..-.--.--....-.-..-..-cgcc............................................agggc...--.-.--...-...G.GC...CGU.A.U.CGU..C.A...CG...AU....C...G...C....UUC...G..GUGUC.C...G.GC.................GU...A.A.U.G.GGC...AAU....CGC.G.G.G..C.AGGUG.A.....ACUA.C.AGCGCG.......................................GCG.AAAG.C.C........GG...C.CUGAUCG
   NC_007954.1       CA.A...G.....C...U.....G.......U.......C..U............A............A.GC....C.U....G.UG..A.UG.C.G....A.A..C..C.A.U.G..A.UG.AA....A.A..A..G........................................................CG.U.UU...U...G.GC...CGG.A.U.CAU..C.A...GU...AU....C...G...G....UUC...U..GUCGU.G...G.GC.................AC...C.A.U.G.GGC...AAC....GCU.G.G.C..C.AAGUU.A.....AUUA.C.UCGGCG.......................................GCU.AAGG.C.U........GG...A.UUAAUUG
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   NZ_LT906463.1     CC.A...U.....C...U.....U.......U.......C..U............A............A.AG....C.A....A.UG..U.UA.C.G....U.U..C..C.A.U.G..A.UG.AA....A.A..A..A........................................................CG.U.UU...U...G.GC...CGU.A.U.CAU..C.A...CC...AU....U...G...G....UUC...C..GUCGU.C...G.GC.................UC...A.A.U.G.GGU...AAC....CCA.G.G.U..C.AAUCU.A.....ACUA.C.UGUGCC.......................................GCU.AAAG.C.C........GG...U.UUGAUUG
   NZ_LT906479.1     CC.G...U.....C...U.....G.......U.......C..A............A............A.AG....C.G....G.UA..A.UG.C.G....C.G..C..U.A.U.G..A.UG.AA....A.A..A..G........................................................CG.G.UU...U...G.GC...CGU.A.U.CAU..C.A...CC...AU....C...G...G....UUC...C..GUUGU.C...G.GC.................AC...C.A.U.G.GGU...AAC....GCA.G.G.G..C.AGGCU.A.....ACUA.C.GCGGCG.......................................GCU.AAAG.C.C........GG...U.CUGAUUG
   NZ_LT906482.1     GC.G...C.....C...A.....G.......-.......C..A............A............A.GC....C.G....-.UG..U.UG.C.G....C.G..G..C.A.U.G..A.UG.AA....G.C..A..G........................................................CG.C.AG...C...G.GC...CGC.A.U.UAU..C.A...GC...AU....C...A...C....CUC...C..GUGGU.G...G.GC.................AC...U.A.U.G.GGC...AAU....GCC.G.G.G..C.AGAGU.A.....ACUA.C.GCCGCC.......................................GCC.AAAG.C.C........GG...C.CUGAUCG
   NZ_LT907988.1     CC.G...C.....C...U.....G.......U.......C..G............C............G.CG....C.U....G.UG..C.UG.C.G....C.A..A..C.A.U.G..A.UG.AA....G.G..C..G........................................................CG.C.UG...G...G.GC...CGU.A.U.CAU..C.A...AC...AU....U...A...C....CUC...G..GUGGU.G...G.GC.................GC...C.A.G.C.GGC...AAC....GCU.G.G.C..C.AGGCC.A.....ACUA.C.GCCGCC.......................................GCC.AAGG.C.G........GG...C.GUGGCAG
   NZ_LT960614.1     CC.G...C.....C...U.....C.......U.......C..G............C............G.GG....C.G....G.CG..A.UC.C.G....G.G..G..C.A.U.G..A.UG.AA....G.C..G..C........................................................CG.C.UA...U...G.GC...CGC.A.U.CAU..C.G...GC...AU....C...A...C....CUC...G..AUCGU.C...G.GC.................GU...C.A.C.C.GGC...AAC....GCC.G.G.C..C.AGGCC.A.....ACUA.C.GCCGCC.......................................GCC.AAGG.C.C........GG...C.AUGAUCG
   NZ_OU015430.1     CC.G...C.....A...C.....G.......U.......C..C............A............A.GG....C.G....G.UC..A.UG.C.G....C.U..C..G.A.U.G..A.UG.AA....G.G..C..G........................................................CG.C.AA...G...G.GC...CGC.A.U.CAU..C.A...AC...AU....C...G...C....CUC...G..GUCAU.C...G.GC.................GU...C.A.C.C.GGC...AAC....GCG.G.G.C..C.AGGCC.A.....ACUA.U.GCCGCG.......................................GCG.AAGG.C.C........GG...G.AUCAUCG
   NZ_OU342399.1     UA.A...C.....A...U.....G.......A.......C..U............A............A.AG....C.G....G.UU..C.AA.C.G....U.A..C..U.U.U.C..U.UA.AA....A.C..A..G........................................................CG.C.AA...A...G.GA...UCU.A.U.AAU..C.C...AC...AU....G...A...G....UUC...U..GUUGU.G...G.GU.................GU...U.A.A.A.GGA...AAU....GCU.G.G.U..C.AAGCU.A.....AUUA.U.GCAGCU.......................................UCA.AAAG.C.U........GG...U.AUUAUUG
   NZ_OU343031.1     UU.A...C.....C...U.....G.......U.......C..A............C............G.CG....C.U....G.UG..C.UA.C.G....G.C..C..G.A.U.G..A.UU.AA....A.G..C..G........................................................CG.U.AG...C...G.GG...CGU.A.U.UAU..U.A...AU...AU....A...A...C....AUC...G..GUUGU.U...G.GC.................UC...A.G.U.A.GGU...AAU....UCG.G.G.U..C.AGGUU.A.....ACUA.U.GCAGCG.......................................GCU.AAAG.C.A........GG...A.GUAGCUG
   NZ_OU594967.1     UA.A...A.....U...U.....A.......U.......C..G............A............A.AA....C.C....G.UU..U.UA.C.G....A.G..C..U.A.U.G..A.UG.AA....G.A..A..A........................................................CG.G.UC...C...G.GU...CGC.G.U.AAU..U.A...AU...AU....C...G...G....UUC...A..GUUGU.C...G.GU.................UC...U.A.U.G.GGU...AAU....GCU.G.G.A..C.AAACU.A.....AUUA.U.UCAGCA.......................................GCC.AAAG.C.C........GG...G.UUAUUAG
   NZ_OU907312.1     UC.U...U.....U...U.....A.......U.......C..A............A............A.AG....C.G....G.UG..C.UA.G.G....G.C..U..U.A.U.G..G.UU.AA....A.A..A..G........................................................CG.C.UA...U...G.GG...CGU.A.U.UAU..U.A...AC...GU....G...G...G....AUC...A..GUGGU.G...G.GU.................AG...U.A.C.C.GGC...AAU....AGU.G.G.C..C.AGACU.A.....AUUA.U.ACGGCU.......................................GCU.AAGG.C.U........GG...G.CUGAUAG
   NZ_OU912926.1     GA.A...U.....G...A.....G.......U.......C..G............C............G.--....C.C....G.UA..C.UA.C.G....A.G..C..C.A.U.G..A.UG.AA....G.G..C..A........................................................CG.C.CA...U...G.GC...CGC.A.U.UAU..C.A...AU...AU....U...U...C....AUC...G..GUGAU.A...G.GC.................AG...U.A.U.G.GGC...AAC....GCG.G.G.A..C.AAGCU.A.....AUUA.C.GCGGCC.......................................UCC.AAGG.C.U........GG...C.AUCAUCG
   NZ_OX336425.1     UA.A...U.....A...U.....G.......A.......C..A............A............A.AG....C.A....A.UU..C.AA.A.A....A.A..C..C.U.U.U..U.UG.AA....A.C..A..A........................................................CG.U.UC...G...G.GU...UCU.A.U.UAU..C.A...AU...AU....U...A...G....UUC...A..GUAGU.A...G.GG.................GU...U.U.C.A.GGA...AAU....GCA.G.G.A..C.AAACA.A.....ACUA.U.GCAGCU.......................................UCA.AAAG.C.A........GG...U.GCAAUUG


   Structure         ((.(..................................................................((......(....(.((..(.((.(.(......(..(..(.(.(.(..(.((........................................................................)).).))...)...).))...))).).).)))..).....)).........)...)...)....(((...(..(((((..........................))...).).).).)))............(.(.(.(..(.(((((........((..(.((...........................................)))...))............))...).)))))))


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sraB-rpmF-plsX-fabH-fabD-fabG-acpP-fabF-yceD



Position: 4437-4546, Conformation: #0







97% 90% 75% 50% Nucleotide present N N N Nucleotide identify E < 0.1 Base-pair covariation E < 0.05 Helix-level covariation 97% 90% 75%

R Y Y R R C R U U C G A U G R Y A A R G G G C G A U Y A U Y A Y A U Y R U C G U G U G G Y A Y G G Y A A Y C G G C A R R C A A Y U A Y G C G C G C A A R G C G G Y U R U Y G 5'