serS



Position: 941-1055, Conformation: #1







DMS reactivity > 1.0 0.0 0.4 0.7 G/U/No data
Position: 0 (position.label in template: 0.5')5' Position: 1 (position.label in template: 1.U) Reactivity: nanU Position: 2 (position.label in template: 2.C) Reactivity: nanC Position: 3 (position.label in template: 3.G) Reactivity: nanG Position: 4 (position.label in template: 4.A) Reactivity: nanA Position: 5 (position.label in template: 5.C) Reactivity: nanC Position: 6 (position.label in template: 6.A) Reactivity: nanA Position: 7 (position.label in template: 7.A) Reactivity: nanA Position: 8 (position.label in template: 8.A) Reactivity: nanA Position: 9 (position.label in template: 9.G) Reactivity: nanG Position: 10 (position.label in template: 10.U) Reactivity: nanU Position: 11 (position.label in template: 11.U) Reactivity: nanU Position: 12 (position.label in template: 12.G) Reactivity: nanG Position: 13 (position.label in template: 13.A) Reactivity: nanA Position: 14 (position.label in template: 14.A) Reactivity: nanA Position: 15 (position.label in template: 15.A) Reactivity: nanA Position: 16 (position.label in template: 16.U) Reactivity: nanU Position: 17 (position.label in template: 17.G) Reactivity: nanG Position: 18 (position.label in template: 18.G) Reactivity: nanG Position: 19 (position.label in template: 19.U) Reactivity: nanU Position: 20 (position.label in template: 20.G) Reactivity: nanG Position: 21 (position.label in template: 21.C) Reactivity: nanC Position: 22 (position.label in template: 22.A) Reactivity: nanA Position: 23 (position.label in template: 23.G) Reactivity: nanG Position: 24 (position.label in template: 24.A) Reactivity: nanA Position: 25 (position.label in template: 25.U) Reactivity: nanU Position: 26 (position.label in template: 26.C) Reactivity: nanC Position: 27 (position.label in template: 27.G) Reactivity: nanG Position: 28 (position.label in template: 28.U) Reactivity: nanU Position: 29 (position.label in template: 29.G) Reactivity: nanG Position: 30 (position.label in template: 30.C) Reactivity: nanC Position: 31 (position.label in template: 31.G) Reactivity: nanG Position: 32 (position.label in template: 32.C) Reactivity: nanC Position: 33 (position.label in template: 33.C) Reactivity: 0C Position: 34 (position.label in template: 34.C) Reactivity: 0.5C Position: 35 (position.label in template: 35.A) Reactivity: 0.5A Position: 36 (position.label in template: 36.G) Reactivity: nanG Position: 37 (position.label in template: 37.A) Reactivity: 1A Position: 38 (position.label in template: 38.A) Reactivity: 1A Position: 39 (position.label in template: 39.G) Reactivity: nanG Position: 40 (position.label in template: 40.A) Reactivity: 0.5A Position: 41 (position.label in template: 41.C) Reactivity: 0C Position: 42 (position.label in template: 42.U) Reactivity: nanU Position: 43 (position.label in template: 43.C) Reactivity: 0.5C Position: 44 (position.label in template: 44.A) Reactivity: 1A Position: 45 (position.label in template: 45.A) Reactivity: 0A Position: 46 (position.label in template: 46.U) Reactivity: nanU Position: 47 (position.label in template: 47.G) Reactivity: nanG Position: 48 (position.label in template: 48.G) Reactivity: nanG Position: 49 (position.label in template: 49.C) Reactivity: 0C Position: 50 (position.label in template: 50.G) Reactivity: nanG Position: 51 (position.label in template: 51.G) Reactivity: nanG Position: 52 (position.label in template: 52.C) Reactivity: 1C Position: 53 (position.label in template: 53.G) Reactivity: nanG Position: 54 (position.label in template: 54.C) Reactivity: 0C Position: 55 (position.label in template: 55.U) Reactivity: nanU Position: 56 (position.label in template: 56.G) Reactivity: nanG Position: 57 (position.label in template: 57.G) Reactivity: nanG Position: 58 (position.label in template: 58.A) Reactivity: 0A Position: 59 (position.label in template: 59.A) Reactivity: 0.5A Position: 60 (position.label in template: 60.G) Reactivity: nanG Position: 61 (position.label in template: 61.A) Reactivity: 0A Position: 62 (position.label in template: 62.G) Reactivity: nanG Position: 63 (position.label in template: 63.A) Reactivity: 0.5A Position: 64 (position.label in template: 64.U) Reactivity: nanU Position: 65 (position.label in template: 65.G) Reactivity: nanG Position: 66 (position.label in template: 66.A) Reactivity: 0.5A Position: 67 (position.label in template: 67.C) Reactivity: 0C Position: 68 (position.label in template: 68.U) Reactivity: nanU Position: 69 (position.label in template: 69.G) Reactivity: nanG Position: 70 (position.label in template: 70.G) Reactivity: nanG Position: 71 (position.label in template: 71.U) Reactivity: nanU Position: 72 (position.label in template: 72.C) Reactivity: 0.5C Position: 73 (position.label in template: 73.A) Reactivity: 0A Position: 74 (position.label in template: 74.U) Reactivity: nanU Position: 75 (position.label in template: 75.G) Reactivity: nanG Position: 76 (position.label in template: 76.C) Reactivity: 0C Position: 77 (position.label in template: 77.A) Reactivity: 0.5A Position: 78 (position.label in template: 78.G) Reactivity: nanG Position: 79 (position.label in template: 79.A) Reactivity: 0A Position: 80 (position.label in template: 80.A) Reactivity: 0A Position: 81 (position.label in template: 81.A) Reactivity: 0.5A Position: 82 (position.label in template: 82.A) Reactivity: 1A Position: 83 (position.label in template: 83.A) Reactivity: 0A Position: 84 (position.label in template: 84.G) Reactivity: nanG Position: 85 (position.label in template: 85.U) Reactivity: nanU Position: 86 (position.label in template: 86.C) Reactivity: 0C Position: 87 (position.label in template: 87.C) Reactivity: 0C Position: 88 (position.label in template: 88.U) Reactivity: nanU Position: 89 (position.label in template: 89.G) Reactivity: nanG Position: 90 (position.label in template: 90.C) Reactivity: 0.5C Position: 91 (position.label in template: 91.A) Reactivity: 0A Position: 92 (position.label in template: 92.G) Reactivity: nanG Position: 93 (position.label in template: 93.U) Reactivity: nanU Position: 94 (position.label in template: 94.U) Reactivity: nanU Position: 95 (position.label in template: 95.G) Reactivity: nanG Position: 96 (position.label in template: 96.C) Reactivity: 0.5C Position: 97 (position.label in template: 97.U) Reactivity: nanU Position: 98 (position.label in template: 98.G) Reactivity: nanG Position: 99 (position.label in template: 99.G) Reactivity: nanG Position: 100 (position.label in template: 100.G) Reactivity: nanG Position: 101 (position.label in template: 101.C) Reactivity: 0C Position: 102 (position.label in template: 102.C) Reactivity: 0C Position: 103 (position.label in template: 103.U) Reactivity: nanU Position: 104 (position.label in template: 104.G) Reactivity: nanG Position: 105 (position.label in template: 105.C) Reactivity: 0C Position: 106 (position.label in template: 106.C) Reactivity: 0.5C Position: 107 (position.label in template: 107.G) Reactivity: nanG Position: 108 (position.label in template: 108.U) Reactivity: nanU Position: 109 (position.label in template: 109.A) Reactivity: 0.5A Position: 110 (position.label in template: 110.C) Reactivity: 0.5C Position: 111 (position.label in template: 111.C) Reactivity: 0.5C Position: 112 (position.label in template: 112.G) Reactivity: nanG Position: 113 (position.label in template: 113.U) Reactivity: nanU Position: 114 (position.label in template: 114.A) Reactivity: 0.5A Position: 115 (position.label in template: 115.A) Reactivity: 0A Position: 116 (position.label in template: 116.A) Reactivity: 0A Position: 117 (position.label in template: 117.A) Reactivity: 1A Position: 118 (position.label in template: 118.U) Reactivity: nanU Position: 119 (position.label in template: 119.C) Reactivity: 1C Position: 120 (position.label in template: 120.A) Reactivity: 0.5A Position: 121 (position.label in template: 121.U) Reactivity: nanU Position: 122 (position.label in template: 122.C) Reactivity: 0C Position: 123 (position.label in template: 123.C) Reactivity: 1C Position: 124 (position.label in template: 124.U) Reactivity: nanU Position: 125 (position.label in template: 125.U) Reactivity: nanU Position: 126 (position.label in template: 126.U) Reactivity: nanU Position: 127 (position.label in template: 127.G) Reactivity: nanG Position: 128 (position.label in template: 128.C) Reactivity: nanC Position: 129 (position.label in template: 129.A) Reactivity: nanA Position: 130 (position.label in template: 130.C) Reactivity: nanC Position: 131 (position.label in template: 131.U) Reactivity: nanU Position: 132 (position.label in template: 132.G) Reactivity: nanG Position: 133 (position.label in template: 133.G) Reactivity: nanG Position: 134 (position.label in template: 134.C) Reactivity: nanC Position: 135 (position.label in template: 135.G) Reactivity: nanG Position: 136 (position.label in template: 136.A) Reactivity: nanA Position: 137 (position.label in template: 137.C) Reactivity: nanC Position: 138 (position.label in template: 138.A) Reactivity: nanA Position: 139 (position.label in template: 139.U) Reactivity: nanU Position: 140 (position.label in template: 140.G) Reactivity: nanG Position: 141 (position.label in template: 141.G) Reactivity: nanG Position: 142 (position.label in template: 142.G) Reactivity: nanG Position: 143 (position.label in template: 143.C) Reactivity: nanC Position: 144 (position.label in template: 144.U) Reactivity: nanU Position: 145 (position.label in template: 145.U) Reactivity: nanU Position: 146 (position.label in template: 146.U) Reactivity: nanU Position: 147 (position.label in template: 147.G) Reactivity: nanG Position: 148 (position.label in template: 148.G) Reactivity: nanG Position: 149 (position.label in template: 149.C) Reactivity: nanC Position: 150 (position.label in template: 150.G) Reactivity: nanG Position: 151 (position.label in template: 151.C) Reactivity: nanC Position: 152 (position.label in template: 152.U) Reactivity: nanU Position: 153 (position.label in template: 153.U) Reactivity: nanU Position: 154 (position.label in template: 154.G) Reactivity: nanG Position: 155 (position.label in template: 155.C) Reactivity: nanC Position: 156 (position.label in template: 156.3')3' 10 20 30 50 100 150


serS



Position: 941-1055, Conformation: #1







Retained alignments:


   NC_003869.1       UCGAC.AAGGUAGAGCU.GGUUAA...A...U.U.C..A............................C..A..G..A..A..C....C...G....G....A..C...A.A.A.U..C...U.U....A...C..G.A.G....G.AAUUG...G..A......AA.A....A...A.UGA............................C.A.AGA....G.A....UG...C..AG.A...A...G...A..A..G.U.U...C..U...GC........AGG...C..U.C..U.U..G.GC..CUU.....CCUUACAGAGUGGUUGCUAUAU...............................................GC..AC..AG.G.G..G.A.U.U.U...AG.G..A..U..U...U...A...C...U.G.C.A
   NC_003910.7       UCGAU.AAAGUUGAAAU.GGUACA...A...A.U.U..G............................U..U..A..A..G..C....C...U....G....A..A...A.C.C.U..C...A.A....U...G..A.C.U....G.CGCUU...G..A......UG.A....A...U.UAA............................C.U.CGU....C.A....CG...C..UG.A...A...A...U.cA..U.U.C...U..U...GAgaaacuugAAU...U..A.-..-.-..-.CC..UUA.....CCGUACUGUACAAUUAUGUAGU...............................................G-..--..--.G.U..G.A.U.G.U...UG.G..U..U..U...U...A...G...U.G.C.C
   NC_003911.12      UCGAA.AAGGUCGAAAU.GGUCUC...G...G.U.C..A............................C..C..C..A..U..C....C...C....G....A..U...C.A.U.U..C...C.G....A...C..G.C.C....G.AGCAG...A..A......AC.G....C...A.UGU............................U.G.CGC....U.G....CG...C..CG.A...G...G...G..C..A.U.U...C..U...CG........AGG...C..G.C..U.G..G.GG..AUC.....CCCUAUCGCACCAUCGUUCUGU...............................................GC..AC..CG.G.C..G.A.C.A.U...GG.G..G..U..U...C...G...G...C.G.C.G
   NC_004347.2       UUGAU.AAAGUGGAAUU.AGUACA...G...U.U.G..G............................U..U..A..A..G..C....C...A....G....A..A...G.A.U.U..C...A.A....U...G..G.C.U....G.CACUC...G..A......AG.U....G...U.UGA............................C.G.GGU....C.A....UG...C..UG.A...A...A...C..A..G.U.A...C..U...GC........AAC...G..C.U..U.A..G.GU..UUA.....CCUUAUCGCACCGUCGUGCUUU...............................................GC..AC..UG.G.U..G.A.C.A.U...GG.G..C..U..U...U...G...G...C.U.C.A
   NC_004578.1       UCGAC.AAGGUCGAGAU.GGUCCA...G...A.U.C..G............................U..U..G..C..A..C....C...G....G....A..C...G.A.U.U..C...C.A....U...G..G.C.G....G.CCCUU...G..A......AU.C....G...C.UGA............................C.C.GGU....A.A....CG...C..CG.A...A...C...G..C..G.U.U...C..U...GC........AAC...U..G.C..U.G..G.AG..CUG.....CCGUAUCGCACGCUCGCGCUGU...............................................GC..AC..CG.G.C..G.A.C.A.U...GG.G..U..U..U...C...A...G...C.G.C.C
   NC_004603.1       UCGAC.AAAGUUGAGCU.AGUACA...A...A.U.C..A............................C..G..A..A..G..C....C...A....G....A..A...G.A.U.U..C...A.A....U...G..A.C.C....G.CGCUA...G..A......AG.A....G...C.UAA............................C.A.GGU....C.A....CG...C..UG.A...G...A...A..A..G.U.U...C..U...AC........AAC...U..U.C..U.U..G.AA..CUU.....CCUUACCGUAAAGUCGUUCUAU...............................................GU..AC..AG.G.C..G.A.C.A.U...GG.G..C..U..U...C...G...G...C.G.C.U
   NC_004757.1       UUGAU.AAGGUCGAGCU.CGUACA...A...A.U.C..A............................C..U..C..A..U..C....C...G....G....A..A...A.A.A.U..C...C.C....A...U..G.A.A....G.CGUUG...G..A......AU.C....A...C.UGG............................U.A.GGC....C.A....UG...C..CG.A...A...A...A..G..A.U.U...C..U...CC........AGA...A..G.C..U.G..G.AG..CUG.....CCUUACCGUGUCAUGCUGCUGU...............................................GU..AC..CG.G.U..G.A.C.A.U...GG.G..A..U..U...C...U...C...U.G.C.U
   NC_005126.1       UUGAU.AAAGUUGAACU.GGUUCA...G...A.U.U..G............................U..U..C..A..U..C....C...U....G....A..U...G.A.A.U..C...A.A....U...G..G.A.U....G.CAUUG...G..A......AG.C....A...U.UGA............................C.A.GGG....C.A....UG...C..AG.A...G...A...A..A..G.U.G...C..U...GC........AAU...U..A.C..U.G..A.AU..CUG.....CCAUAUCGUAAAGUUUUAUUGU...............................................GU..AC..CG.G.U..G.A.U.A.U...GG.G..U..U..U...U...A...G...C.G.C.G
   NC_005966.1       UUGAU.AAAGUUGAAAU.GGUGCA...G...A.U.C..G............................U..U..A..A..A..C....C...U....G....A..A...G.A.U.U..C...U.A....U...G..C.A.G....G.CGCUU...G..A......AG.A....G...C.UGA............................C.A.GGA....C.A....UG...C..GG.A...A...G...G..U..A.U.U...C..U...GC........AGG...C..A.C..U.G..G.GA..UUG.....CCGUAUCGCAAAAUUCUACUUU...............................................GU..GG..CG.G.U..G.A.U.A.U...GG.G..C..U..U...U...G...G...U.U.C.A
   NC_006138.1       UUAAC.AAGGUAGAGCU.GGUGAA...G...U.U.C..A............................C..-..C..A..C..C...cC...G....G....A..A...C.G.G.U..C...A.A....C...G..G.A.U....G.AACUG...G..A......AA.G....C...C.UGC............................U.U.GGC....G.A....UG...C..CG.A...A...G...A..G..G.U.U...C..U...UC........AGC...U..U.C..U.U..G.GC..UUG.....CACUACCGGGUAGUUAAACUCU...............................................GU..AC..CG.G.U..G.A.U.C.U...UG.G..U..U..U...C...U...C...C.U.C.C
   NC_006512.1       UUGAU.AAAGUGGAACU.GGUCUG...G...U.U.G..G............................U..U..A..A..A..C....C...U....G....A..A...C.A.G.U..C...G.A....U...G..G.A.U....G.CGCUG...G..A......GC.A....A...U.UAA............................C.A.GGC....C.A....CG...C..CG.A...A...A...C..U..G.U.G...C..U...GC........AAA...A..G.C..U.U..G.AG..CUG.....CCGUAUCGAAAAGUACUGCUGU...............................................GU..AC..UG.G.G..G.A.U.A.U...GG.G..C..U..U...U...G...G...G.G.C.A
   NC_006513.1       UCGAC.AAGGUGGAACU.GGUGCG...G...A.U.C..G............................A..A..C..A..U..C....C...G....G....A..U...G.C.G.U..C...A.U....G...G..G.C.G....G.CGCUC...G..A......GG.A....A...C.UGA............................C.C.GGU....C.A....CG...C..CG.A...G...G...C..G..A.U.C...C..U...CC........GCA...A..G.C..U.C..G.AG..UUG.....CCGUAUCGCAAAGUCGUGCUGU...............................................GC..AC..CG.G.C..G.A.C.A.U...GG.G..G..U..U...U...U...C...C.G.C.C
   NC_007204.1       UUGAA.AAAGUCGAGAU.GGUCAA...U...A.U.U..-g......................cc...-..-..-..A..C..C...gC...U....G....A..G...C.A.G.U..C...A.G....A...U..G.A.G....U.UGCUU...G..A......AG.C....G...A.UGA............................C.U.GGA....C.A....AG...C..AG.A...A...U...U..U..A.U.U...U..U...AC........AGC...A..G.C..U.U..A.AU..UUG.....CCGUAUCGUACUGUCAAAUUGU...............................................GU..AC..GG.G.C..G.A.U.A.U...GG.G..U..U..U...U...G...C...C.G.C.G
   NC_007205.1       UUUAC.AAAGUUGAAAU.GGUGAG...U...A.U.U..G............................U..U..G..A..A..A....U...U....G....A..U...A.A.G.U..G...C.U....U...A..C.C.A....G.AACUU...G..A......UA.G....A...A.UGA............................C.U.GAU....U.G....UG...C..AA.C...U...A...A..A..A.U.U...U..U...AG........AUU...U..A.C..U.A..A.AA..CUU.....CCAUACCGAAAAAUUGUUUUAU...............................................GU..AC..UG.G.U..G.A.U.A.U...GG.G..U..U..U...U...A...G...U.G.C.U
   NC_007292.1       UUGAU.AAAGUUGAAAU.GGUUCA...A...G.U.A..G............................U..A..C..A..U..C....C...A....G....A..U...A.A.A.U..C...C.A....U...G..C.A.G....A.UCUUA...G..A......AG.A....A...A.UAA............................C.U.AGU....C.A....CG...C..GG.A...A...C...A..A..G.U.A...U..U...GC........AAC...U..A.C..U.U..A.AA..UUA.....CCAUAUAGGAAAAUAUUAUUAU...............................................GC..AC..AG.G.A..A.A.U.A.U...UG.G..A..U..U...U...U...C...U.U.C.U
   NC_007481.1       UUGAU.AAAGUAGAACU.UGUACA...G...C.U.G..G............................U..A..A..A..A..C....C...A....G....A..A...G.A.C.U..C...A.A....U...G..G.C.A....A.CGCUU...G..A......AG.A....G...U.UAA............................C.A.GGU....C.A....UG...C..AG.A...G...C...A..A..A.U.A...C..U...AC........AAG...A..G.C..U.U..G.AA..CUA.....CCGUACCGUAAAGUAAUUUUAU...............................................GC..AU..GG.G.C..G.A.C.A.U...GG.G..C..U..U...U...G...GcucA.G.C.U
   NC_007503.1       UUAAU.AAAGUAGAGUU.AGUUAA...G...U.U.U..G............................U..C..A..A..A..C....C...G....G....A..A...A.A.C.U..C...G.U....A...U..G.A.G....G.AGCUG...G..A......AA.A....A...C.UCA............................C.C.CGG....G.A....UG...C..GG.A...A...A...G..G..G.U.C...C..U...GC........AAC...U..U.U..U.G..G.GA..CUA.....CCUUACCGGGUGGUGGUGCUUU...............................................GC..AC..CG.G.G..G.A.C.C.U...GG.G..C..U..U...U...A...G...U.G.C.U
   NC_007510.1       UCGAC.AAGGUCGAGAU.GGUGCA...G...G.U.U..G............................U.cG..C..A..C..C....-...G....G....A..A...G.C.G.U..C...G.U....A...C..G.C.G....G.CGCUC...G..A......CG.A....G...A.UGG............................U.C.GGC....C.A....UG...C..GG.A...A...G...C..G..A.U.C...C..U...GC........AGA...A..G.C..U.C..G.GC..CUG.....CCGUACCGCGUGAUCACGCUGU...............................................GC..AC..GG.G.C..G.A.C.A.U...GG.GcuU..C..U...C...G...G...C.GgC.G
   NC_007519.1       UCACC.AAAGUGGAAAU.GGUGCG...G...U.U.U..G............................C..C..C..A..C..C....C...U....G....A..A...A.A.A.U..C...G.U....U...U..G.A.A....G.AGCUG...G..A......AA.A....A...C.UGC............................G.C.AGU....C.A....CG...C..CG.A...A...G...U..G..C.U.G...U..U...GC........AGA...A..G.C..U.G..G.GC..CUG.....CAUUACAGGGUUGUCACCCUGU...............................................GC..AG..CG.G.G..G.A.U.A.U...GG.G..C..U..U...U...U...C...U.G.C.G
   NC_007614.1       UCGAG.AAGGUGGAACU.GGUGCA...A...A.U.U..G............................U..C..C..A..U..C....C...U....G....C..A...C.A.C.U..C...C.U....A...U..A.A.A....G.CGCUG...G..A......AG.A....G...C.UGA............................C.A.GGC....C.A....UG...C..CG.A...A...G...C..A..A.U.U...C..U...UC........AGA...A..G.C..U.G..A.AA..CUG.....CCUUACCGGGUGAUGGCGUUAU...............................................G-..CA..CG.G.C.cG.A.C.A.U...GG.G..G..U..U...U...G...C...-.-.-.-
   NC_007626.1       UCCAC.AAGGUGGAGAU.GGUCUC...C...A.U.C..G............................C..C..C..A..U..C....C...C....G....A..U...G.C.C.U..C...C.G....G...C..G.C.C....G.AGCAC...G..A......GC.G....C...A.UGA............................C.C.CAA....U.G....CG...C..CG.A...G...A...C..G..G.U.G...C..U...GC........AGC...G..C.C..U.G..G.GG..CUG.....GCCUAUCGCGUCAUCGUGCUGU...............................................GC..AC..CG.G.C..G.A.C.A.U...GG.G..C..U..U...U...U...C...G.G.C.G
   NC_007645.1       UUGAG.AAAGUGGAGCU.GAUUCA...U...G.U.G..G............................U..G..G..C..G..C....C...G....G....A..G...C.A.G.U..C...U.G....A...U..G.C.A....G.CUCUG...G..A......AG.A....G...C.UGA............................C.C.GGC....A.A....UG...C..GG.A...A...C...G..A..A.U.C...C..U...GC........AGU...U..A.U..U.A..A.AC..CUG.....CCGUAUCGUGUUGUGGCGCUGU...............................................GC..GG..AG.G.C..G.A.U.C.U...GG.G..C..U..U...C...U...C...U.G.C.G
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   NC_013961.1       UCGAU.AAGGUUGAAAU.GGUGCA...U...A.U.C..A............................C..G..C..G..A..C....C...G....G....A..A...G.A.C.U..C...A.A....U...G..G.A.U....G.CGCUG...G..A......AG.A....A...U.UGG............................U.C.GGG....C.A....CG...C..UG.A...A...A...A..A..G.U.U...U..U...GC........AGC...U..U.C..U.U..A.AU..CUG.....CCGUACCGCAAGGUGCUGUUGU...............................................GC..AC..CG.G.A..G.A.U.A.U...GG.G..G..U..U...C...G...G...-.-.-.-
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   NC_014722.1       UCGAC.AAGGUCGAGAU.GGUGCA...G...A.U.C..A............................C..G.uC..G..C..C....-...G....G....A..C...A.G.C.U..C...A.U....A...C..C.A.G....G.CGCUG...G..A......GG.A....A...A.UGG............................U.G.GGG....C.A....UG...C..CG.A...A...A...C..G..A.U.C...C..U...GC........AGC...G..G.C..U.G..G.AG..UUG.....CCGUACCGCGUGAUUACGCUGU...............................................GU..AC..CG.G.C..G.A.C.A.U...GG.G..G..U..-...U...C...U...C.A.G.C
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   NC_014761.1       UCGAC.AAGGUCGAGAU.GGUGGU...C...U.U.C..A............................G..C..C..A..C..C....C...C....G....A..C...G.A.G.A..G...C.U....A...C..G.A.C....U.GGCUG...G..A......GC.G....G...C.UGA............................C.C.CGC....C.A....GG...C..CG.A...G...G...A..G..C.U.G...C..U...CG........AGC...G..G.C..U.G..G.GC..CUC.....CCCUACCGGCGGCUCCUCAUGU...............................................GC..AC..CG.C.C..G.A.C.A.U...G-.G..G..C..U...U...C...A...C.C.C.A
   NC_014828.1       UCAAC.AAGGUGGAACU.GGUCAA...G...U.U.U..G............................U..G..C..G..G..C....C...G....G....A..A...G.A.C.U..C...G.U....A...U..G.A.A....G.AACUG...G..A......AA.A....A...C.UGA............................C.A.GGC....G.A....CG...C..CG.A...A...C...G..U..G.U.U...C..U...GC........AAG...G..A.C..U.G..G.GC..CUG.....CCGUACCAUGUGGUCACGCUGU...............................................GC..GC..GG.G.C..G.A.U.C.U...UG.G..C..U..U...-...-...-...U.U.C.G
   NC_014831.1       UCGAC.AAGGUGGAGCU.GGUCAA...G...U.U.C..G............................U..C..C..A..C..C....C...C....G....A..C...C.G.U.U..C...C.G....C...C..G.A.G....G.AGCAC...G..A......GA.A....G...C.UGG............................U.G.GCC....G.A....CG...C..CG.A...G...G...C..C..G.U.G...C..U...GC........AGC...G..G.C..U.G..G.GC..CUG.....CCGUACCGGCUGGUGCUGAUCU...............................................GC..AC..CG.G.C..G.A.U.A.U...GG.G..C..-..U...U...C...G...C.C.C.A
   NC_014844.1       UCCAC.AAGGUGGAGAU.GGUCAA...C...U.U.C..G............................C..C..C..A..C..C....C...G....G....A..C...A.C.A.U..C...C.U....A...C..G.A.G....G.CCCUG...G..A......GG.C....C...A.UGA............................C.C.GCA....G.C....AG...C..GG.A...A...A...A..G..A.U.A...U..U...GC........AGU...U..G.C..U.C..G.GC..AUC.....CACUACCGGGUCAUCGAGCUGU...............................................GU..AC..CG.G.C..G.A.C.A.U...GG.G..C..U..U...U...G...G...C.G.C.G
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   NC_014910.1       UCGAC.AAGGUCGAGAU.GGUGCA...G...A.U.C..G............................U..G..C..A..U..C....C...C....G....A..C...A.A.G.A..G...C.U....A...C..G.A.G....G.CGCUU...G..A......AG.A....G...A.UGA............................C.G.CGC....C.A....UG...C..CG.A...G...G...C..C..G.U.C...C..U...GC........AGA...A..G.C..U.G..G.GC..CUG.....CCCUACCGCGUGGUGUGCCUGU...............................................GC..AC..CG.G.C..G.A.C.A.U...GG.G..C..U..U...C...G...G...C.AgC.G
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   NC_014972.1       UCGAA.AAGGUCGAGCU.GGUCAA...A...U.U.C..A............................C..C..G..C..C..C....C...G....G....A..A...A.C.C.U..C...C.U....G...G..G.A.G....G.AGUUG...G..A......A-.A....G...C.UUG............................C.U.GGC....CgA....UG...C..CG.A...G...G...C..G..G.C.G...C..U...GC........AAC...U..G.C..U.G..G.AG..CUG.....CCCUACCGGGUGAUCACCCUUU...............................................GU..AC..CG.G.C..G.A.C.C.U...GG.G..C..U..U...-...-...-...C.U.C.C
   NC_015064.1       UCCAG.AAGGUGGAGCU.CGUCAA...G...U.U.C..A............................C..U..C..G..C..C....C...C....C....A..G...G.A.C.U..C...A.G....A...G..G.C.C....G.AGCAC...G..A......GA.A....C...C.UGA............................C.C.CGC....A.A....CG...C..CG.A...G...A...C..C..A.U.C...C..U...CG........AGC...A..G.C..U.C..G.GC..CUG.....CCCUACCGCCGCAUGCUCCUCU...............................................GC..AC..CG.G.C..G.A.C.A.U...GG.G..C..U..U...C...U...C...C.U.C.U
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   NC_015161.1       UCCGC.AAGGUGGAGCA.GUACGU...G...A.U.U..U............................G..C..C..G..G..C....C...C....G....A..A...G.A.C.G..G...C.A....U...G..G.C.C....U.GGUUC...G..A......GA.A....A...C.UGC............................U.G.GCC....A.A....CG...C..CG.A...G...G...G..U..A.U.C...U..U...GC........AGG...C..G.C..U.G..G.AG..UUG.....CCCUACCGGGUGGUGCAGAACU...............................................CU..AC..CG.G.C..G.A.C.A.U...GG.G..-..-..C...C...U...G...G.G.C.A
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   NC_015389.1       UCACC.AAGGUCGAGAU.GGUGAA...G...U.U.C..G............................C..G..C..G..G..C....C...C....G....A..G...G.A.G.U..C...A.G....A...C..G.A.C....G.AGCUG...G..A......GU.C....C...A.UGA............................C.C.GCC....G.A....GG...C..CG.A...G...C...U..G..C.U.C...C..U...GC........AGC...A..G.C..U.U..G.AG..CUG.....CCGUAUCGCGUGAUCAGCCUGU...............................................GC..AC..GG.G.A..G.A.U.C.U...GG.G..C..U..U...C...U...C...G.G.C.G
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   NC_015554.1       UCGAC.AAAGUUGAGCU.UGUACA...G...C.U.A..G............................U..G..A..A..G..C....C...U....G....A..A...G.A.U.A..G...U.U....U...C..G.A.U....G.CAUUA...G..A......GG.A....A...C.UUA............................C.U.CAG....C.A....CG...C..CG.A...A...A...C..U..A.U.U...U..U...AC........AGA...A..G.C..U.U..G.AA..UUG.....CCAUACCGUAAAGUGUUGCUUU...............................................GU..AC..UG.G.U..G.A.C.A.U...GG.G..C..U..U...C...G...G...C.G.C.A
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   NC_015567.1       UCGAC.AAGGUCGAGAU.GGUACA...G...A.U.C..G............................U..U..C..G..C..C....C...G....G....A..A...G.A.U.U..C...C.A....U...G..G.C.G....G.CGUUG...G..A......AG.A....A...C.UGA............................C.C.GGC....C.A....UG...C..CG.A...G...A...A..A..G.U.G...C..U...GC........AAC...U..G.C..U.G..A.AC..CUG.....CCGUACCGUAAAGUCUUGCUGU...............................................GU..AC..CG.G.U..G.A.C.A.U...GG.G..C..U..U...C...G...G...C.G.C.U
   NC_015589.1       UUAAU.AAAGUGGAAUU.GGUUAA...A...U.-.-..-............................U..C..A..G..C..Cg.ggC...G....G....A..A...G.A.A.U..C...C.U....U...U..G.A.C....G.AACUG...G..A......AA.A....A...U.UAA............................C.G.GAA....A.A....CG...C..UG.A...A...A...A..G..G.U.G...C..U...UC........AAG...C..G.C..U.G..G.GC..CUU.....CCUUACAGGGUGAUCCUGCUCU...............................................GU..AC..CG.G.G..G.A.C.A.U...GG.G..C..U..U...U...G...C...U.U.C.G
   NC_015675.1       UCUAC.AAGGUCGAGCU.GGUCUC...G...A.U.C..A............................C..C..G..A..U..C....A...G....G....A..A...U.C.G.U..C...G.C....U...C..G.C.C....G.AGCAU...G..A......GC.G....G...A.UGA............................C.-.-GC....A.A....UGc.gC..CG.A...G...G...A..A..G.U.G...C..U...GA........AGC...G..G.C..U.C..G.GC..CUG.....CCGUUCCGGACCAUGGUGCUGU...............................................GC..AC..CG.G.C..G.A.C.A.U...GG.G..U..U..U...U...G...G...C.G.C.G
   NC_015677.1       UCGAC.AAGGUGGAGAU.GGUGCA...G...A.U.C..G............................U..G..C..A..C..C....C...C....G....A..G...C.G.C.A..G...C.C....A...C..G.A.G....G.CGCUG...G..A......AG.A....G...A.UGA............................C.C.GGC....C.A....UG...C..CG.A...G...G...C..C..G.U.G...C..U...GC........AGC...A..G.C..U.G..G.GC..UUG.....CCGUACCGCGUGAUGCUGCUGU...............................................GC..AC..CG.G.C..G.A.C.A.U...GG.G..C..U..U...C...G...G...C.G.C.G
   NC_015681.1       UCAAU.AAAGUCGAAUU.AGUUAA...G...U.U.C..G............................C..C..C..A..C..C....C...U....G....A..A...A.C.U.U..C...U.U....A...C..G.A.C....G.AACUG...G..A......AA.G....C...U.UAA............................C.C.CUU....G.A....UG...C..CG.A...A...G...A..A..G.U.C...C..U...CC........AAA...A..A.C..U.U..G.GC..CUU.....CCUUAUAGAGUGGUAAUCCUUU...............................................GC..AC..AG.G.G..G.A.C.C.U...UG.G..C..U..U...U...G...C...C.-.-.-
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   NZ_CP029347.1     UCGAC.AAGGUGGAGUU.GGUGCA...A...U.U.G..G............................U..U..A..A..G..C....C...C....G....A..A...C.A.G.U..C...U.U....U...C..G.A.G....G.CUUUA...G..A......GC.A....G...U.UGA............................C.C.GGU....C.A....UG...C..AG.A...G...A...A..G..G.U.A...U..U...AC........AGC...U..G.C..U.G..G.AA..CUG.....CCUUAUCGCAAGAUGUUGCUGU...............................................GC..AC..CG.G.C..G.A.U.A.U...GG.G..C..U..U...U...G...G...U.G.C.C
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   NZ_CP029373.1     UCGAC.AAGGUCGAGAU.GGUGCA...G...A.U.C..A............................C..C..C..A..C..C....C...G....G....A..C...C.G.C.A..G...C.U....A...C..G.A.G....G.CCCUG...G..A......AG.A....G...A.UGA............................C.C.GGC....C.A....UG...C..CG.A...A...G...C..C..G.U.G...C..U...GC........AGA...A..G.C..U.C..G.GC..CUG.....CCGUACCGCGUCAUGUCGCUCU...............................................GC..AC..GG.G.C..G.A.C.A.U...GG.G..C..U..U...C...G...G...C.G.C.C
   NZ_CP029397.2     UCGAC.AAAGUUGAAAU.GGUACA...A...A.U.C..G............................U..U..A..A..A..C....C...U....G....A..A...G.A.U.U..C...U.A....-...U..G.C.A...aG.CUUUG...G..A......AG.A....C...U.UAA............................C.A.GGU....C.A....UG...C..UG.A...A...G...G..C..A.U.C...U..U...AC........AAG...C..U.C..U.G..G.GU..UUG.....CCAUACCGUAAAAUCGUAUUGU...............................................GU..GG..UG.G.U..G.A.C.A.U...GG.G..C..U..U...U...G...G...C.G.C.A
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   NZ_CP029491.1     UCCAC.AAGGUUGAAAU.GGUCAA...G...U.U.C..G............................C..A..A..A..A..C....C...U....G....A.gA...C.C.U.C..C...U.A....U...G..A.C.G....A.-AUUG...G..A......GA.A....A...A.UGA............................C.U.GCC....A.A....UG...C..CG.A...A...A...A..U..A.U.C...C..U...GC........AAA...A..A.C..U.A..G.GC..CUG.....CCCUACCGCGUUAUUACCCUCU...............................................GU..AC..CG.G.C..G.A.U.A.U...GG.G..C..U..U...C...U...C...U.G.C.U
   NZ_CP029495.1     UCGAC.AAGGUGGAAAU.GG----...-...-.-.-..-ugcgcg............uggaaaa...-..-..-..-..A..C....C...G....G....A..A...A.A.C.U..C...C.U....A...C..G.C.C....G.CGCUG...G..A......AG.A....A...A.UGG............................U.A.GGC....C.A....CG...C..CG.A...A...A...A..C..A.U.C...C..U...GA........AGG...C..G.C..U.G..G.AG..CUG.....CCCUAUCGCGUGAUCACGCUGU...............................................GC..AC..CG.G.C..G.A.C.A.U...GG.G..U..U..U...C...G...G...C.U.C.G
   NZ_CP029556.1     UCGAG.AAGGUGGAGCU.GGUCAG...C...A.U.C..G............................C..G..C..G..G..C....C...G....G....A..G...G.A.A.U..C...C.G....A...U..G.C.C....G.AGCAC...G..A......AC.G....C...A.UGA............................C.C.CGC....U.G....CG...C..CG.A...A...G...U..G..G.U.G...C..U...GG........AAA...A..G.C..U.C..G.GG..CUG.....CCGUACCGCCGCAUGCUGCUGU...............................................GC..AC..CG.G.C..G.A.C.A.U...GG.G..C..U..U...U...U...C...G.G.C.C
   NZ_CP029608.1     UCGAC.AAGGUCGAGAU.GGUGCA...G...A.U.C..G............................U.cG..A..G..C..C....G...U....C....G..A...-.C.G.U..C...G.A....U...G..G.A.C....G.CGCUG...G..A......AA.G....C...C.UGA............................C.C.GCC....A.A....CG...C..CG.A...G...A...A..A..G.U.C...C..U...GC........AAC...U..G.C..U.G..G.GU..CUG.....CCUUACCGUACCCUGGCGCUGU...............................................GC..AC..CG.G.C..G.A.C.A.U...GG.G..C..U..U...C...A...G...U.G.C.G
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   NZ_LT906447.1     UCGAC.AAAGUUGAGUU.GGUACG...U...U.U.U..G............................A..A..A..A..A..C....C...U....G....A..A...G.A.U.U..C...U.U....G...G..G.A.U....G.CAUUA...G..A......AC.A....G...U.UAA............................C.A.AGC....A.A....CG...C..AG.A...A...G...C.uA..U.C.U...U..A...GA........AG-...A..A.C..U.A..G.AA..CUA.....CCAUAUCGUCGUGUAAUUCUUU...............................................GU..AC..UG.G.C..G.A.C.C.U...UG.G..A..U..U...C...A...G...U.U.-.-
   NZ_LT906448.1     UUGAU.AAAGUGGAAUU.AGUACA...A...A.U.U..G............................U..-..U..G..C..U....C..cA....G....A..A...A.C.U.U..C...U.A....U...G..G.A.A....G.CGCUA...G..A......GG.A....A...U.UAA............................C.A.GGU....C.A....GG...C..UG.A...G...A...A..G..G.U.C...U..U...AC........AAU...U..A.U..U.A..G.AA..UUA.....CCAUACCGUAAGGUUUUAUUAU...............................................GU..AC..UG.G.U..G.A.U.A.U...GG.G..A..U..U...U...G...G...U.U.C.U
   NZ_LT906460.1     UUGAU.AAAGUUGAAAU.GGUGCG...C...U.U.C..G............................A..A..A..A..A..C....C...A....G....A..A...G.A.U.U..C...U.Ug.ggA...U..G.C.A....U.U---A...G..A......AG.A....A...A.UGA............................C.U.UUA....A.A....UG...C..UG.A...A...G...C..A..A.U.C...U..U...AG........AAG...A..G.U..U.A..C.AA..UUA.....CCAUACCGUCGUGUCAUACUAU...............................................GU..AC..UG.G.U..G.A.U.A.U...UG.G..C..U..U...U...A...G...U.G.C.A
   NZ_LT906462.1     UUAAU.AAAGUAGAAAU.GGUUAG...A...U.A.U..G............................A..G..C..G..C..C....C...A....G....A..A...G.A.U.U..C...A.U....U...U..A.A.U....G.CACUU...G..A......AG.A....A...U.UAA............................C.U.UUG....C.A....UG...C..CG.A...A...A...A..A..A.U.U...C..U...UC........AAG...C..U.C..U.A..G.AA..UUA.....CCAUACCGUACUGUUAAUCUAU...............................................GU..AC..AG.G.A..G.A.C.A.U...UG.G..U..U..U...U...G...G...-.-.-.U
   NZ_LT906463.1     UUGAU.AAAGUUGAGAU.GGUACA...A...A.U.C..G............................U..U..G..A..C..C....C...A....G....A..U...A.A.A.U..C...C.A....U...G..G.A.A....G.CCUUG...G..A......AG.A....A...U.UGA............................C.C.GGC....C.A....UG...C..GG.A...A...A...A..A..G.U.A...U..U...GC........AAU...U..A.U..U.G..A.AC..UUG.....CCAUAUCGUAAAGUGUUGCUUU...............................................GC..AC..CG.G.U..G.A.U.A.U...GG.G..C..U..U...U...G...G...U.U.C.U
   NZ_LT906464.1     UCGAA.AAAGUUGAAAU.GGUACG...C...A.U.U..G............................A..A..A..A..A..C....C...U....G....A..A...G.A.U.U..C...U.U....G...G..A.A.-...uG.CAUUA...G..A......AG.A....A...A.UGA............................C.U.GGU....A.A....CG...C..AG.A...A...G...C.gA..U.U.C...U..U...GA........AGA...A..-.U..U.A..G.GC..UUA.....CCAUACCGUCGUGUGAUUUUAU...............................................GU..AC..UG.G.A..G.A.C.A.U...CG.G..A..U..U...C...G...G...U.U.C.A
   NZ_LT906479.1     UCGAC.AAGGUUGAAAU.GGUGCA...G...A.U.C..G............................U..U..C..G..C..C....C...G....G....A..A...G.A.U.U..C...C.A....U...G..G.C.G....G.CGCUG...G..A......AG.A....A...C.UGA............................C.C.GGC....C.A....CG...C..GG.A...A...A...A..A..G.U.G...C..U...GC........AGU...U..G.C..U.G..GcG-..CUG.....CCUUACCGCAAAGUGCUGCUGU...............................................GC..AC..CG.G.C..G.A.C.A.U...GG.G..C..U..U...C...G...G...C.G.C.U
   NZ_LT906482.1     UUGAU.AAGGUAGAAAU.GGUGCA...A...A.U.U..G............................C..U..C..A..C..C....C...C....G....A..C...C.A.C.U..C..cU.A....C...G..A.C.G....-.CACUG...G..A......AG.A....A...A.UGG............................U.C.GGC....C.A....CG...C..CG.A...G...C...G..C..A.U.C...U..U...GC........AAC...U..G.C..U.C..G.AA..CUG.....CCUUACCGCGUUAUUACUCUGU...............................................GU..AC..CG.G.C..G.A.U.A.U...GG.G..C..U..U...C...G...G...C.G.C.C
   NZ_LT907975.1     UCUAC.AAGGUGGAGAU.GGUCAA...C...U.U.U..G............................C..C..C..A..C..C....C...A....G....A..G...A.A.G.U..C...C.U....A...C..G.A.G....G.CACUG...G..A......AG.A....U...A.UGA............................C.G.GCA....G.C....GG...C..AG.A...A...A...A..A..A.U.U...C..U...GC........AGA...U..A.C..U.C..A.AU..CUG.....CCGUACCGCGUCAUCGAGCUGU...............................................GC..AG..CG.G.C..G.A.U.A.U...CG.G..G..U..U...C...A...G...C.G.C.G
   NZ_LT907988.1     UCGAG.AAGGUCGAGAU.GGUGCA...G...A.U.C..G............................U.cG..C..G..C..C....C...-....G....A..C...A.C.U.U..C...G.U....U...C..C.A.G....G.CGCUG...G..A......AG.A....C...A.UGG............................U.C.GGC....C.A....CG...C..GG.A...G...C...G..C..G.U.C...C..U...GC........AAU...U..G.C..U.G..G.AA..CUG.....CCGUACCGCGUCAUGCUGCUGU...............................................GC..AC..CG.G.U..G.A.C.A.U...GG.G..C..U..U...U...G...G...C.-.G.C
   NZ_LT960614.1     CUCGA.AGGUCGAGCUU.GUCUCG...-...A.U.C..A............................C..G..G..C..A..C....C...G....G....A..-...-.-.G.A..C...A.U....C...G..C.U.G....G.AGGAG...C..A......CG.A....AcgcA.UGC............................U.C.UCC....U.G....CG...C..CG.A...G...G...A..G..G.U.C...U..U...GA........AGC...G..C.C..U.C..G.GC..CUC.....CACUACCGCGUCGUGACGCUCU...............................................GC..AC..CG.G.C..G.A.C.A.U...GG.G..C..U..U...C...G...G...C.A.G.C
   NZ_OU343031.1     UUGAU.AAAAUUGAAAU.GGUGCA...A...A.U.-..-ua....................cau...U..G.cC..G..A..C....C...A....G....A..U...C.A.U.A..C...C.A....A...G..C.-.-....-.-AUUA...G..A......GG.A....A...A.UGG............................U.A.AGA....C.A....CG...C..UG.A...A...G...C..U..A.U.U...U..U...GC........AAC...A..G.C..U.A..G.AG..UUA.....CCGUACCGAGUAAUCACGCUGU...............................................GU..AC..UG.G.U..G.A.C.A.U...GG.G..G..U..U...U...U...-...C.A.G.C
   NZ_OU912926.1     UUGAC.AAGGUGGAGUU.GGUACA...G...A.U.U..G............................U..G..C..A..U..C....C...U....G....A..G...C.A.A.U..C..cU.A....U...G..A.C.-....G.CGCUG...G..A......AC.A....A...U.UG-............................U.U.AGC...aC.A....UG...C..CG.A...A...A...C..G..A.U.U...U..U...GC........AAA...A..A.C..U.G..G.CU..UUG.....CCAUACCGGGUAAUGAAACUGU...............................................GC..AC..CG.G.U..G.A.U.A.U...GG.G..U..U..U...U...U...C...U.G.C.-


   Structure         (((((....)))))....((((((...........................................)..)..)..)..)..).................................................(..(.(.(.......((((...(......................................................).).))).....................................(..(.(.(...(.................((...(..(.(..(.(..(.((...............................................................................))...)..)).).)..).).).......)).)..)..)..................).).).)


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serS



Position: 941-1055, Conformation: #1







97% 90% 75% 50% Nucleotide present N N N Nucleotide identify E < 0.1 Base-pair covariation E < 0.05 Helix-level covariation 97% 90% 75%

U Y R A Y A A R G U G A R U G G U R R U R Y R C C G A R R A U C R G R Y U G A R R R R U R R C R R A Y G C G A R R R U Y U R A R R Y U G R Y U R C C U A Y C G R R U Y Y U U G Y A C G G Y G A Y A U G G G Y U U Y Y 5'