sdhC-sdhD-sdhA-sdhB-sucA-sucB-sucC-sucD-sdhX



Position: 7157-7276, Conformation: #1







DMS reactivity > 1.0 0.0 0.4 0.7 G/U/No data
Position: 0 (position.label in template: 0.5')5' Position: 1 (position.label in template: 1.U) Reactivity: nanU Position: 2 (position.label in template: 2.G) Reactivity: nanG Position: 3 (position.label in template: 3.C) Reactivity: nanC Position: 4 (position.label in template: 4.U) Reactivity: nanU Position: 5 (position.label in template: 5.G) Reactivity: nanG Position: 6 (position.label in template: 6.G) Reactivity: nanG Position: 7 (position.label in template: 7.A) Reactivity: nanA Position: 8 (position.label in template: 8.A) Reactivity: nanA Position: 9 (position.label in template: 9.G) Reactivity: nanG Position: 10 (position.label in template: 10.C) Reactivity: nanC Position: 11 (position.label in template: 11.G) Reactivity: nanG Position: 12 (position.label in template: 12.A) Reactivity: nanA Position: 13 (position.label in template: 13.A) Reactivity: nanA Position: 14 (position.label in template: 14.A) Reactivity: nanA Position: 15 (position.label in template: 15.A) Reactivity: nanA Position: 16 (position.label in template: 16.A) Reactivity: nanA Position: 17 (position.label in template: 17.C) Reactivity: nanC Position: 18 (position.label in template: 18.U) Reactivity: nanU Position: 19 (position.label in template: 19.C) Reactivity: nanC Position: 20 (position.label in template: 20.C) Reactivity: nanC Position: 21 (position.label in template: 21.A) Reactivity: nanA Position: 22 (position.label in template: 22.C) Reactivity: nanC Position: 23 (position.label in template: 23.C) Reactivity: nanC Position: 24 (position.label in template: 24.G) Reactivity: nanG Position: 25 (position.label in template: 25.C) Reactivity: nanC Position: 26 (position.label in template: 26.C) Reactivity: nanC Position: 27 (position.label in template: 27.A) Reactivity: nanA Position: 28 (position.label in template: 28.U) Reactivity: nanU Position: 29 (position.label in template: 29.G) Reactivity: nanG Position: 30 (position.label in template: 30.C) Reactivity: nanC Position: 31 (position.label in template: 31.U) Reactivity: nanU Position: 32 (position.label in template: 32.G) Reactivity: nanG Position: 33 (position.label in template: 33.A) Reactivity: 1A Position: 34 (position.label in template: 34.C) Reactivity: 0.5C Position: 35 (position.label in template: 35.C) Reactivity: 0C Position: 36 (position.label in template: 36.A) Reactivity: 0A Position: 37 (position.label in template: 37.C) Reactivity: 0C Position: 38 (position.label in template: 38.G) Reactivity: nanG Position: 39 (position.label in template: 39.U) Reactivity: nanU Position: 40 (position.label in template: 40.U) Reactivity: nanU Position: 41 (position.label in template: 41.C) Reactivity: 1C Position: 42 (position.label in template: 42.A) Reactivity: 0.5A Position: 43 (position.label in template: 43.A) Reactivity: 1A Position: 44 (position.label in template: 44.C) Reactivity: 1C Position: 45 (position.label in template: 45.G) Reactivity: nanG Position: 46 (position.label in template: 46.A) Reactivity: 0A Position: 47 (position.label in template: 47.A) Reactivity: 0A Position: 48 (position.label in template: 48.G) Reactivity: nanG Position: 49 (position.label in template: 49.U) Reactivity: nanU Position: 50 (position.label in template: 50.C) Reactivity: 0.5C Position: 51 (position.label in template: 51.A) Reactivity: 1A Position: 52 (position.label in template: 52.A) Reactivity: 0A Position: 53 (position.label in template: 53.C) Reactivity: 0C Position: 54 (position.label in template: 54.A) Reactivity: 0A Position: 55 (position.label in template: 55.U) Reactivity: nanU Position: 56 (position.label in template: 56.G) Reactivity: nanG Position: 57 (position.label in template: 57.A) Reactivity: 0A Position: 58 (position.label in template: 58.A) Reactivity: 0.5A Position: 59 (position.label in template: 59.G) Reactivity: nanG Position: 60 (position.label in template: 60.C) Reactivity: 0C Position: 61 (position.label in template: 61.C) Reactivity: 0C Position: 62 (position.label in template: 62.G) Reactivity: nanG Position: 63 (position.label in template: 63.A) Reactivity: 1A Position: 64 (position.label in template: 64.U) Reactivity: nanU Position: 65 (position.label in template: 65.U) Reactivity: nanU Position: 66 (position.label in template: 66.A) Reactivity: 0.5A Position: 67 (position.label in template: 67.U) Reactivity: nanU Position: 68 (position.label in template: 68.G) Reactivity: nanG Position: 69 (position.label in template: 69.G) Reactivity: nanG Position: 70 (position.label in template: 70.A) Reactivity: 0A Position: 71 (position.label in template: 71.U) Reactivity: nanU Position: 72 (position.label in template: 72.C) Reactivity: 0C Position: 73 (position.label in template: 73.U) Reactivity: nanU Position: 74 (position.label in template: 74.G) Reactivity: nanG Position: 75 (position.label in template: 75.C) Reactivity: 0C Position: 76 (position.label in template: 76.G) Reactivity: nanG Position: 77 (position.label in template: 77.U) Reactivity: nanU Position: 78 (position.label in template: 78.A) Reactivity: 1A Position: 79 (position.label in template: 79.A) Reactivity: 0.5A Position: 80 (position.label in template: 80.G) Reactivity: nanG Position: 81 (position.label in template: 81.C) Reactivity: 0C Position: 82 (position.label in template: 82.A) Reactivity: 0A Position: 83 (position.label in template: 83.G) Reactivity: nanG Position: 84 (position.label in template: 84.U) Reactivity: nanU Position: 85 (position.label in template: 85.A) Reactivity: 0.5A Position: 86 (position.label in template: 86.C) Reactivity: 1C Position: 87 (position.label in template: 87.G) Reactivity: nanG Position: 88 (position.label in template: 88.G) Reactivity: nanG Position: 89 (position.label in template: 89.U) Reactivity: nanU Position: 90 (position.label in template: 90.G) Reactivity: nanG Position: 91 (position.label in template: 91.A) Reactivity: 1A Position: 92 (position.label in template: 92.A) Reactivity: 1A Position: 93 (position.label in template: 93.G) Reactivity: nanG Position: 94 (position.label in template: 94.C) Reactivity: 0C Position: 95 (position.label in template: 95.G) Reactivity: nanG Position: 96 (position.label in template: 96.U) Reactivity: nanU Position: 97 (position.label in template: 97.U) Reactivity: nanU Position: 98 (position.label in template: 98.U) Reactivity: nanU Position: 99 (position.label in template: 99.G) Reactivity: nanG Position: 100 (position.label in template: 100.A) Reactivity: 0A Position: 101 (position.label in template: 101.A) Reactivity: 1A Position: 102 (position.label in template: 102.A) Reactivity: 1A Position: 103 (position.label in template: 103.A) Reactivity: 1A Position: 104 (position.label in template: 104.A) Reactivity: 0A Position: 105 (position.label in template: 105.C) Reactivity: 0C Position: 106 (position.label in template: 106.G) Reactivity: nanG Position: 107 (position.label in template: 107.C) Reactivity: 0C Position: 108 (position.label in template: 108.C) Reactivity: 0C Position: 109 (position.label in template: 109.A) Reactivity: 0.5A Position: 110 (position.label in template: 110.C) Reactivity: 0C Position: 111 (position.label in template: 111.G) Reactivity: nanG Position: 112 (position.label in template: 112.G) Reactivity: nanG Position: 113 (position.label in template: 113.C) Reactivity: 1C Position: 114 (position.label in template: 114.A) Reactivity: 0A Position: 115 (position.label in template: 115.U) Reactivity: nanU Position: 116 (position.label in template: 116.C) Reactivity: 0C Position: 117 (position.label in template: 117.C) Reactivity: 0C Position: 118 (position.label in template: 118.G) Reactivity: nanG Position: 119 (position.label in template: 119.U) Reactivity: nanU Position: 120 (position.label in template: 120.C) Reactivity: 1C Position: 121 (position.label in template: 121.U) Reactivity: nanU Position: 122 (position.label in template: 122.G) Reactivity: nanG Position: 123 (position.label in template: 123.G) Reactivity: nanG Position: 124 (position.label in template: 124.G) Reactivity: nanG Position: 125 (position.label in template: 125.C) Reactivity: 0C Position: 126 (position.label in template: 126.U) Reactivity: nanU Position: 127 (position.label in template: 127.U) Reactivity: nanU Position: 128 (position.label in template: 128.U) Reactivity: nanU Position: 129 (position.label in template: 129.A) Reactivity: nanA Position: 130 (position.label in template: 130.U) Reactivity: nanU Position: 131 (position.label in template: 131.G) Reactivity: nanG Position: 132 (position.label in template: 132.U) Reactivity: nanU Position: 133 (position.label in template: 133.C) Reactivity: nanC Position: 134 (position.label in template: 134.C) Reactivity: nanC Position: 135 (position.label in template: 135.U) Reactivity: nanU Position: 136 (position.label in template: 136.U) Reactivity: nanU Position: 137 (position.label in template: 137.C) Reactivity: nanC Position: 138 (position.label in template: 138.U) Reactivity: nanU Position: 139 (position.label in template: 139.A) Reactivity: nanA Position: 140 (position.label in template: 140.C) Reactivity: nanC Position: 141 (position.label in template: 141.G) Reactivity: nanG Position: 142 (position.label in template: 142.U) Reactivity: nanU Position: 143 (position.label in template: 143.G) Reactivity: nanG Position: 144 (position.label in template: 144.A) Reactivity: nanA Position: 145 (position.label in template: 145.A) Reactivity: nanA Position: 146 (position.label in template: 146.A) Reactivity: nanA Position: 147 (position.label in template: 147.G) Reactivity: nanG Position: 148 (position.label in template: 148.C) Reactivity: nanC Position: 149 (position.label in template: 149.G) Reactivity: nanG Position: 150 (position.label in template: 150.G) Reactivity: nanG Position: 151 (position.label in template: 151.U) Reactivity: nanU Position: 152 (position.label in template: 152.G) Reactivity: nanG Position: 153 (position.label in template: 153.G) Reactivity: nanG Position: 154 (position.label in template: 154.U) Reactivity: nanU Position: 155 (position.label in template: 155.U) Reactivity: nanU Position: 156 (position.label in template: 156.G) Reactivity: nanG Position: 157 (position.label in template: 157.A) Reactivity: nanA Position: 158 (position.label in template: 158.A) Reactivity: nanA Position: 159 (position.label in template: 159.G) Reactivity: nanG Position: 160 (position.label in template: 160.C) Reactivity: nanC Position: 161 (position.label in template: 161.3')3' 10 20 30 50 100 150


sdhC-sdhD-sdhA-sdhB-sucA-sucB-sucC-sucD-sdhX



Position: 7157-7276, Conformation: #1







Retained alignments:


   NC_002620.2       ----....U...C...A........................A.GC...U...U...U..GC.AU..GA....UUCGG.CA.AUGUUAACUACGU...UUAACGAAGU....AUGUAUG.G....G.G.CC....G...A..U..U...A.U.U..G..C....U.U.U.G.C...-...-...G...A.....................................A.A...A...G....A...A...A...A..A.C..Aa.gA..AG..CUU....U..U...G...-...-...-.-uu................................................................ucc...A...A.G-..UA.....UG...G.UG....U.U...AA..G.CUU.....GG.UU.UUAUGUC..CUUU...U....UUGUUAA.AGC...A.G...U..A.G.U.A...G.A
   NC_003910.7       UAUU....A...G...A........................A.GC...U...A...A..AA.AU..UC....UACUG.CG.AUGUUAACUACGU...UUAACGAAGU....UAACAUG.A....A.G.CC....A...A..U..U...A.U.G..G..A....U.U.U.A.C...G...U...A...A.....................................G.C...A...A....U...A...U...A..A.A..G...A..CU..UGU....U..U...G...A...A...A.A........................................................................A...A.CU..CA.....UG...A.CA....C.U...CG..U.CUU.....GG.UU.UUAUGUC..UUUU...U....ACGUGAA.AGC...G.G...U..A.A.C.U...G.A
   NC_004193.1       UUGU....A...G...A........................A.GU...A...C...A..GC.AU..AA....UACGG.CA.AUGCUAACUACUU...UUAACGAAGU....AGAUAUG.A....C.A.GC....G...G..U..U...A.U.G..G..A....A.U.U.A.C...G...A...A...-aac............................aac...G.U...-...-....A...A...A...G..A.U..A...A..AU..UCU....U..A...G...A...C...A.A........................................................................A...-.--..AA.....UG...G.CG....U.U...AA..G.UUA.....GG.AU.UCAUGUC..CUUC...U....UUACAAA.AGC...G.G...U..U.G.U.A...G.G
   NC_004347.2       UGUU....A...G...A........................A.GC...G...A...A..AA.AC..UC....UACCG.CA.AUGCUCACGACCU...UCAACGAAGU....GAACAUG.A....A.G.CC....A...A..U..C...A.U.G..G..A....U.A.U.C.C...G...U...A...A.....................................G.C...A...G....U...A...C...C..A.A..G...A..UA..UCU....U..U...G...A...A...A.A........................................................................G...C.GC..CA.....CG...G.UA....U.C...CG..U.UUA.....GG.UU.UCAUGUC..UUUC...U....AUGUGAA.AGC...A.G...U..A.A.C.U...G.A
   NC_004556.1       UCAU....G...C...A........................G.UC...G...A...A..GA.AC..UC....CACUG.CG.AUGCUGACCACCU...UUAAUGAAAU....CAACCUG.-....-.G.CC....A...A..A..G...U.C.U..C..A....A.A.C.-.-...-...-...-...-auacg.......................caaaga...-.-...G...C....U...A...C...A..G.-..G...A..AG..AAU....U..C...C...A...G...A.A........................................................................A...G.CC..CA.....CG...G.UA....U.C...AA..A.UUG.....GG.CU.UCAUGAG..CUUU...U....UCGUGAA.AGC...C.G...C..C.G.C.C...A.A
   NC_004578.1       GGUC....G...A...A........................G.CC...C...A...G..UC.GA..AC....-AUGG.CG.AUGCUGACCACGU...UCAACGAAGU....CGACAUG.A....-.-.CC....G...AagU..C...A.U.G..G..C....G.C.U.G.C...G...U...U...C.....................................G.A...A...G....U...A...C...A..A.G..G...A..CC..UGU....U..C...G...A...G...A.A........................................................................G...U.CG..CA.....CA...A.UG....G.CguaCG..U.CUG.....GG.CU.UCAUGUC..CUUC...U....UCGUAAA.AGC...G.G...C..C.A.C.C...G.A
   NC_004603.1       UGCU....G...G...A........................A.GC...G...A...A..AA.AC..AG....CACCG.CA.AUGCUAACGACGU...UUAACGAAGU....GAACAUG.A....A.G.CC....A...A..U..C...A.U.G..G..A....U.C.U.U.C...G...U...A...A.....................................G.C...A...A....U...A...C...A..A.A..G...A..CC..AGU....U..C...G...A...A...G.A........................................................................G...C.GU..CA.....CG...G.UA....U.U...CG..U.CUU.....GG.CU.UCAUGUC..UUUC...U....AUGUGAA.AGC...A.G...U..G.A.C.A...G.A
   NC_004757.1       UGGU....A...C...A........................G.UC...C...C...A..AU.CU..AC....AGCAG.CC.AUUCUGACUACGU...UCAACGAAGU....CAACAUG.C....A.G.GC....A...A..U..C...A.U.G..G..A....U.U.U.G.C...G...C...G...C.....................................C.C...G...U....U...A...C...A..A.G..G...A..CA..GCU....U..U...G...A...G...A.A........................................................................A...G.AA..CA.....UG...G.UA....U.C...AA..A.CUC.....GG.CU.UUACUUC..AUUU...U....UUGUCAA.AGC...U.G...U..G.G.U.U...G.C
   NC_005126.1       UGCU....G...G...A........................A.GC...G...A...A..AA.AC..AA....CACCG.CG.AUGUUGACAACAU...UUAAUGAAGU....UAACAUG.A....A.G.CC....A...A..U..C..cA.A.G..A..A....-.A.U.G.C...G...U...A...A.....................................A.C...A...G....U...A...C...G..G.C..G...A..GG..CGU....U..U...G...A...A...A.A........................................................................A...C.GC..CA.....CG...G.UG....U.G...CG..U.CUG.....GG.CU.UUAUGUC..UUUC...U....AUGUGAA.AGC...C.G...U..G.G.U.U...G.A
   NC_005966.1       ---C....U...G...C........................C.AC...U...C...A..AG.AA..AC....A---G.CA.AUGUUGACAACGU...UUAACGAAGU....CAACAUG.A....A.A.CC....A...A..U..C...A.U.G..G..A....A.A.U.G.C...G...U...G...C.....................................A.C...A...G....U...A...U...A..A.A..G...A..UG..CAU....U..U...G...A...A...A.A........................................................................A...C.GU..CA.....UG...G.UG....C.G...CG..U.CUU.....GG.CU.UUAUGUC..UUUC...U....UUGUUAA.AGC...A.G...C..A.A.C.U...G.A
   NC_006300.1       UGCU....G...G...A........................A.GU...G...A...A..AA.AC..AG....UACCG.CA.AUGUUAACCACUU...UCAACGAAGU....GGAUAUG.C....A.A.CC....U...A..U..U...A.U.G..C..A....G.U.U.A.C...G...C...A...A.....................................A.A...A...A....U...A...U...G..C.U..G...A..AA..AAU....U..U...G...A...A...A.A........................................................................G...C.AG..CA.....UG...A.CA....C.C...CG..A.UUA.....GG.UU.UUAUGUC..CUUU...U....AUGUGAA.AGC...G.G...U..U.G.U.G...G.A
   NC_006510.1       UGCU....U...G...A........................A.GU...G...A...C..AC.AA..AC....GACCG.CG.AUGUUGACGACGU...UCAACGAAAU....UGACAUG.U....C.G.GC....G...G..U..C...A.U.C..G..A....U.C.U.G.C...G...C...A...A.....................................G.C...G...G....A...AaaaA...G..A.U..A...A..AU..UUU....U..C...G...A...-...-.-........................................................................A...G.AG..CA.....UG...A.CG....U.C...CG..C.CUC.....GG.CU.UUAUGUC..AUUU...U....UCGUCAA.AGC...G.G...C..U.G.U.C...G.C
   NC_006512.1       UGUU....G...C...A........................A.GC...U...A...A..GA.AC..GA....CACCG.CG.AUGUUGACCACGU...UUAACGAAAU....CAACAUG.A....A.G.CC....A...A..U..U...A.U.G..G..A....C.U.U.G.C...G...U...A...A.....................................G.A...A...G....U...A...C...A..A.A..G...A..CG..UGU....U..U...G...A...A...G.A........................................................................A...A.CU..CA.....CG...G.CA....C.G...CG..U.CUU.....GG.UU.UCAUGGG..CUUC...U....ACGUCAA.AGC...U.G...U..A.A.C.U...G.A
   NC_006513.1       UGAU....C...C...A........................G.UC...G...A...A..GA.AC..GA....AAACG.CG.AUCCUGACGACGU...UCAACGAAGU....CAACAUG.G....C.G.CC....G...G..U..G...A.U.G..G..C....G.C.U.G.C...G...C...A...A.....................................G.C...A...G....U...A...C...G..G.C..G...A..GA..AGU....U..C...G...A...G...A.A........................................................................G...G.CG..CA.....CG...G.CG....U.G...CG..C.CUG.....GG.CU.UCAUGGG..UUUC...U....UCGUCAA.GGC...C.G...C..G.G.U.C...G.C
   NC_007204.1       ----....-...-...C........................U.UC...U...C...A..AG.AA..AC....G---G.CA.AUGCUAACGACGU...UCAACGAAGU....CAACAUG.A....A.A.CC....G...U..U..G...A.U.G..G..A....C.A.U.G.C...G...UacuA...A.....................................G.U...A...U....A...A...A...G..A.U..-...-..-C..AGU....U..U...G...A...A...A.A........................................................................G...C.GU..CA.....UG...G.CA....C.A...CG..U.UUA.....GG.CU.UUAUGUC..GUUA...U....UCGUAAA.AGC...G.G...C..G.A.C.U...G.A
   NC_007292.1       UAUU....A...G...C........................U.GU...U...A...C..UA.AA..AC....UACAG.CU.AUGUUAACUACUU...UUAAUGAAGU....AAACAUG.C....A.A.CC....C...A..U..C...A.U.A..A..A....A.C.U.G.C...G...A...A...A.....................................A.A...A...A....U...A...U...G..G.A..G...A..AU..UAU....U..U...G...A...A...A.A........................................................................A...C.GU..UA.....UG...G.AA....U.U...AC..A.UUA.....GG.AA.UCAUGUC..UUUU...U....AUGUAAA.AGC...A.G...U..U.U.U.A...G.A
   NC_007498.2       GGCG....G...C...A........................C.GC...C...A...G..CA.GA..--....--CCG.CC.AUGGCUACGACCA...UCAACGAAGC....CGACCUG.U....C.A.CG....G...A..U..C...A.U.G..G..A....G.C.U.G.C...G...C...A...G.....................................C.C...A...G....U...A...U...G..G.C..G...A..G-..CGU....U..U...U...A..uG...G.A........................................................................A...C.GG..AA.....CG...G.CA....U.C...AA..A.CUC.....GG.AC.UGAUGUC..UUUC...U....UCGUCAAaGCC...U.G...C..G.U.G.-...G.A
   NC_007510.1       UGCU....C...G...A........................G.UC...G...C...A..GC.AG..AC....CAACG.CG.AUCCUGACGACGU...UCAACGAAGU....GAACAUG.G....C.U.CC....G...G..U..C...A.U.G..G..A....A.C.U.G.C...G...U...A...A.....................................C.A...A...G....U...A...CaagG..A.C..A...A..GU..U--....-..C...G...A...G...A.A........................................................................G...G.AA..CA.....UG...G.CG....U.G...AA..G.CUC.....GG.CU.UCAUGUC..GUUC...U....UCGUGAA.GGC...A.G...C..-.-.-.U...G.U
   NC_007517.1       CUGG...uG...G...C........................C.CG...G...C...A..GC.AG..AC....CGC--.-C.AUGCUCACCACGU...UCAACGAGGC....GGAUCUG.G....G.C.CG....G...G..U..G...A.U.G..G..A....A.C.U.G.C...G...G...A...A.....................................G.A...A...G....U...A...C...A..A.G..G...A..GC..AUU....U..C...C...A...G...A.A........................................................................G...A.AG..CA.....CG...G.CG....U.C...UC..C.CUC.....GG.UU.UCAUGUC..GUUC...U....UCGUGAA.GGC...G.U...G..C.G.U.G...G.A
   NC_007614.1       UGGU....G...C...A........................G.UC...G...C...A..AU.CC..AC....CGCCG.CC.AUCCUUACCACAU...UCAACGAAGU....CAACAUG.C....A.G.GC....G...A..U..C...A.U.G..G..A....U.U.U.G.C...G...C...-...-gc..............................cc...G.C...U...A....C...A...A...G..GaC..A...A..A-..--U....U..U...G...A...A...A.A........................................................................G...G.AG..CA.....UG...G.CG....U.C...AA..A.CUC.....GG.UC.UCACCUC..AUUC...U....UUGUCAA.AGC...G.G...C..G.G.U.G...G.C
   NC_007626.1       CGCCugaaG...G...A........................G.GC...C...C...A..GA.AC..AC....CGCCG.CC.AUGCUGACCACCU...UCAACGAGGU....GGACAUG.A....C.G.GC....G...C..U..G...U.U.C..GacG....U.C.A.G.G...-...-...A...A.....................................C.C...A...G....U...A...C...A..A.G..G...A..CC..AGU....U..C...G...A...G...A.A........................................................................G...C.GC..CA.....CG...G.CA....C.C...AA..G.CUG.....GG.CU.UCAUGUC..CUUC...U....UCGUGAA.GGC...-.-...C..U.G.C.-...G.U
   NC_007645.1       UGCU....G...G...A........................A.GC...U...CagcA..UA.AC..UC....U---G.CA.AUGCUGACUACCU...UCAACGAAGU....CAACAUG.A....A.G.CC....G...A..U..C...A.U.G..G..A....U.C.U.G.C...G...U...A...A.....................................G.C...A...A....U...A...C...A..A.A..G...A..UC..UGU....U..C...G...A...G...A.A........................................................................G...C.GU..CAu..aaUG...G.CG....U.G...AA..A.CUG.....GG.CU.UCAUGUC..CUUC...U....UCGUUAA.AGC...G.G...C..U.U.G.C...G.A
   NC_007712.1       UGCU....G...G...A........................A.GC...G...A...A..AA.AC..AG....CACCG.CC.AUGUUGACCACCU...UCAAUGAGGU....GAACAUG.C....A.G.CC....G...G..U..G...A.U.G..G..A....U.U.U.G.C...G...C...A...A.....................................G.C...A...G....U...A...C...G..G.C..G...A..CG..CGU....U..U...G...A...A...A.A........................................................................G...C.GC..CA.....CG...G.UA....U.C...CG..C.CUG.....GG.CU.UCAUGUC..CUUC...U....AUAUCAA.AGC...G.-...-..-.G.U.A...C.U
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   NZ_LS999205.1     GGUU....G...A...A........................G.CC...C...A...G..UC.GA..A-....CAUGG.CG.AUGCUGACCACCU...UCAACGAAGU....CGACAUG.A....-.-.CU....G...AagU..C...A.U.G..G..C....C.C.U.G.C...G...U...U...C.....................................G.A...A...G....U...A...C...A..A.G..G...A..UC..UGU....U..C...G...A...G...A.A........................................................................G...U.CC..CA.....CA...A.UG....G.CguaCG..C.CUG.....GG.CU.UCAUGUC..GUUC...U....UCGUCAA.GGC...C.G...C..C.A.C.C...G.A
   NZ_LS999839.1     UGUU....A...A...A........................A.AU...G...A...G..A-.--..-C....A---G.CC.AUGCUGACCACCU...UUAACGAGGU....AAACAUG.A....A.G.CC....A...A..U..U...A.U.G..G..A....C.C.U.G.C...-...-...-...-.....................................G.C...G...G....A...A...A...-..-.-..-...-..--..---....-..-...-...-...-...-.-auauaaagauca............................................guuuaaagaaaaa...-...-.--..UA.....UG...G.UG....U.A...GG..U.UUG.....GG.UU.UCAUGAG..UUUC...U....UUACCAA.AGC...G.G...U..A.U.G.U...G.A
   NZ_LT605205.1     UAUC....G...G...U........................G.AA...G...A...A..CG.AG..AC....AGC--.-C.AUGCUGACCACUU...UUAAUGAGGU....AGACAUG.A....A.G.CC....U...A..U..U...A.U.G..G..A....U.U.U.G.C...G...G...A...A.....................................G.A...A...A....U...A...Cc.aG..A.C..C...C..AG..UUU....G..U...G...G...A...G.-........................................................................A...A.AC..A-.....UG...G.UA....U.C...AA..G.CUG.....GG.UA.UCAUGUC..UUUU...U....UCCUGAA.AGC...C.U...G..C.U.C.A...G.U
   NZ_LT608328.1     ---U....U...G...C........................U.GU...A...A...A..GA.AC..GA....GACGG.CC.AUGCUGACCACCU...UCAACGAGGU....AAACAUG.A....A.G.CC....G...A..U..C...A.U.G..G..A....U.C.U.-.-...-...-...-...-gcggaaaaaa..............uaccaggaca...-.-...A...G....U...U...C...G..U.C..G...A..A-..---....-..-...-...-...-...-.-a..................................................................ga...-...-.--..CA.....CG...G.AA....U.C...AA..A.CUG.....GG.CA.UGAUGUC..GUUC...U....UCAUGAA.GGC...-.-...C..U.G.U.G...C.C
   NZ_LT615367.1     UACU....G...G...A........................A.GC...G...A...A..GA.AU..AG....UACCG.CC.AUGCUGACGACGU...UCAAUGAAGU....CAACAUG.C....A.G.CC....U...A..U..C...A.U.G..G..A....U.U.U.G.C...G...C...A...A.....................................G.C...A...A....U...A...U...G..G.U..G...A..AG..CCU....U..C...G...A...G...A.A........................................................................G...C.GU..CA.....UG...G.CG....U.C...CG..U.CUG.....GG.CU.UUAUGUC..UUUC...U....AUAUCAA.AGC...C.G...U..U.G.U.G...G.A
   NZ_LT853882.1     UGAU....G...C...A........................G.UC...G...A...A..GA.AC..UC....GACUG.CA.AUGCUGACCACCU...UCAACGAGGU....CAACCU-.-....U.G.CC....A...A..G..G...U.U.U..C..A....G.C.U.G.C...G...-...-...-cgcaa.......................ggaacu...G.C...A...G....G...-...-...-..A.C..G...A..G-..--U....U..C...C...A...G...A.A........................................................................G...A.CG..CA.....CG...G.CA....U.C...AA..G.CUC.....GG.CU.UCAUGAG..CUUU...U....UCGUCAA.GGC...U.G...C..U.G.C.C...A.A
   NZ_LT855380.1     GGUU....G...A...A........................G.CC...C...A...G..UC.GA..A-....CAUGG.CC.AUGCUGACCACGU...UCAACGAAGU....GGACAUG.A....-.-.CU....G...AagU..C...A.U.G..G..C....G.C.U.G.C...G...U...U...C.....................................G.A...A...G....U...A...C...A..A.G..G...A..CC..UGU....U..C...G...A...G...A.A........................................................................G...U.CG..CA.....CA...A.CG....G.CguaCG..U.CUG.....GG.CU.UCAUGUC..GUUC...U....UUGUCAA.GGC...G.G...C..U.A.C.C...G.A
   NZ_LT897836.1     UGCU....A...G...A........................A.GC...A...A...A..AA.AU..AA....UAUUG.CU.AUGUUGACCACUU...UUAAUGAGGU....GAACAUG.C....A.A.GC....G...A..U..U...A.U.A..G..A....U.C.U.G.C...G...U...A...A.....................................A.C...A...G....U...A...C...G..G.C..A...A..AG..CGU....U..U...G...A...A...A.A........................................................................A...C.GC..CA.....CG...G.UA....U.C...CG..U.UUA.....GG.AU.UCAUGUC..UUUU...U....AUAUUAA.CGC...G.G...U..A.U.U.A...A.U
   NZ_LT899436.1     ---U....U...U...C........................U.GU...A...A...A..GA.AU..GA....AACAG.CU.AUGUUAACUACGU...UUAACGAAGU....UAAUAUG.A....A.G.CC....A...A..U..U...U.U.C..G..A....U.U.U.A.C...G...U...A...A.....................................C.G...A...A....U...A...U...A..A.A..G...A..GG..CUU....U..U...A...A...A...G.C.......................................................................gA...A.GC..-A.....CG...G.AG....U.A...GG..U.UUA.....GG.AU.UCAUGAG..UUUC...U....UUACAUU.AGC...-.-...U..U.G.U.G...U.G
   NZ_LT906434.1     UGUU....G...G...C........................U.UC...U...C...A..AC.AA..GA....AAACG.CG.AUUUUGACUACGU...UUAACGAAGU....CAACAUG.A....A.G.CC....G...G..U..U...A.U.G..G..A....U.U.U.G.C...G...U...G...C.....................................C.A...A...A....U...A...C...A..A.A..G...A..AA..AAU....U..C...G...A...A...A.A........................................................................A...G.AG..CA.....CG...G.CG....U.G...AA..G.CUG.....GG.CU.UUAUGUC..GUUC...U....UUGUCAA.AGC...U.G...C..U.G.U.U...G.C
   NZ_LT906435.1     UGCU....G...C...A........................A.UC...G...C...A..AC.AG..AC....CAACG.CC.AUUCUGACCACGU...UCAACGAAGU....GGACAUG.A....A.G.CC....G...G..U..G...A.U.G..G..A....C.C.U.G.C...G...C...A...A.....................................C.A...A...G....U...A...C...A..A.G..G...A..CA..AGU....U..C...G...A...G...A.A........................................................................G...G.AA..CA.....CG...G.CG....U.G...AA..G.CUG.....GG.UU.UCAUGUC..GUUC...U....UCGUCAA.GGC...C.G...C..-.-.-.U...G.U
   NZ_LT906448.1     UAUU....A...G...A........................G.GC...A...A...A..AA.AC..AG....CACUG.CA.AUGCUAACUACUU...UUAAUGAAGU....AGAUAUG.G....C.A.CC....A...A..U..U...A.U.G..A..A....A.U.U.G.C...G...U...A...A.....................................A.G...U...U....U...A...C...G..G.A..G...A..GA..AAU....U..U...G...A...A...A.A........................................................................A...C.AA..CA.....UG...G.UA....C.U...CG..U.UUA.....GG.CU.UUAUGUC..AUUU...U....AUAUCAA.AGC...A.G...U..A.G.U.U...G.A
   NZ_LT906462.1     UAUU....A...G...A........................A.GU...A...U...C..UA.AU..AA....UACAG.CA.AUGCUAACUACAU...UUAAUGAAGU....UGAUAUG.A....C.U.AA....U...G..U..U...A.U.G..G..A....A.C.U.U.C...G...U...A...A..................................acgU.A...A...A....A...A...A...G..A.C..A...A..AU..UCC....A..A...G...A...A...G.A........................................................................U...C.AU..AA.....UG...G.AA....C.A...CG..U.CUA.....GG.AU.UUAUGUC..AUUC...U....UCACAAA.AGC...U.G...C..U.G.U.A...G.C
   NZ_LT906463.1     UGUU....A...G...A........................A.GC...U...A...A..AA.AU..AG....UACGG.CG.AUGUUAACAACCU...UCAAUGAAGU....UGAUAUG.C....A.G.CC....U...A..U..U...A.U.G.aC..A....U.-.U.A.C...G...U...A...A.....................................A.A...C...C....U...A...U...G..G.U..G...A..AA..AAU....U..U...G...A...A...A.A........................................................................A...C.AA..CA.....UG...G.UG....U.G...CG..U.UUG.....GG.UU.UUAUGUC..UUUU...U....AUAUUAA.AGC...C.G...U..U.G.U.G...G.A
   NZ_LT906479.1     UGUU....G...G...A........................A.GC...G...A...A..GA.AC..AG....CACCG.CG.AUGCUGACCACCU...UCAACGAAAU....CAACAUG.C....A.G.CC....G...A..U..C...A.U.G..G..A....C.C.U.G.C...G...C...A...A.....................................G.C...A...G....U...A...C...G..G.C..G...A..AG..CCU....U..C...G...A...G...A.A........................................................................G...C.GC..CA.....CG...G.CG....U.G...CG..U.CUG.....GG.CU.UCAUGUC..CUUC...U....ACAUCAA.GGC...G.G...U..G.G.U.G...G.A
   NZ_LT906482.1     UGCU....G...C...A........................A.UC...U...C...A..GU.CG..CA....AAACG.CC.AUCCUCACCACGU...UCAACGAGGU....GAACAUG.A....A.G.CC....G...A..U..U...A.U.G..G..A....U.U.U.G.C...G...C...G...C.....................................C.A...A...A....U...A...C...A..A.A..G...A..GA..AGU....U..C...G...A...A...A.A........................................................................A...C.AG..UA.....UG...G.CG....U.G...AA..A.CUG.....GG.CU.UCAUGUC..CUUC...U....UCGUGAA.AGC...C.G...C..C.G.U.G...-.-
   NZ_LT907988.1     UGCU....G...C...A........................A.UC...G...C...A..AC.AG..GA....AAACG.CC.AUCCUGACGACCU...UCAACGAGGU....CAACAUG.C....A.G.GC....U...G..U..-...C.A.U..C..A....A.C.C.U.G..cG...C...A...A.....................................C.A...A...G....U...A...C...A..A.G..G...A..AA..AGU....U..C...G...A...G...A.A........................................................................G...G.AU..CA.....CG...G.CG....U.G...AA..G.CUG.....GG.CU.UCAUGUC..CUUC...U....UCGUGAA.GGC...U.G...C..U.G.U.U...G.C
   NZ_OU015430.1     UGAU....G...C...U........................G.UC...C...A...A..GA.AU..UC....GACCG.CG.AUGCUGACCUCCU...CCAACGAGGU....CAACAUG.A....A.G.GC....C...G..U..C...A.U.G..G..A....C.A.U.G.C...G...C...A...A.....................................G.G...C...G....C...A...G...G..G.C..G...A..GG..CGU....U..C...-...A...A...G.A........................................................................A...C.GC.cUA.....CG...G.CA....U.C...AA..G.CUC.....GG.CU.UCAUGAG..CUUC...U....UCGUCAA.GGC...G.G...C..C.G.C.A...A.A
   NZ_OU015521.1     ---C....C...A...A........................G.UAc.aG...C...A..AG.AA..UC....CGC--.-G.UUGUUAUCUACCU...UUAAUGAAAU....UAAUAUG.A....A.A.CC....A...G..U..A...A.U.G..G..A....C.U.U.A.C...G...A...A...A.....................................A.A...A...A....U...A...C...C..G.U..G...A..UG..CAU....U..U...G...A...G...A.A........................................................................A...A.AA..CA.....UA...A.AG....U.U...CG..U.UUA.....GG.GU.UUAUGUC..GUUU...U....UUACAAA.AGU...U.U...C..A.G.U.U...G.A
   NZ_OU015584.1     UUUC....G...G...U........................U.AA...G...A...A..CG.AA..AC....G---G.CA.AUGCUCACUACGU...UUAACGAAGU....AGACAUG.A....A.G.CC....G...A..U..C...A.U.G..G..A....C.U.U.G.A...G...A...A...A.....................................U.A...A...G....U...A...U...A..A.A..G...C..GC..AGU....U..C...A...A...A...G.A........................................................................A...A.CG..CA.....UG...G.UG....U.U...AG..U.UUG.....GG.AU.UCAUGUC..UUUC...U....UUACGAA.AGC...G.G...U..G.A.C.A...G.A
   NZ_OU343031.1     UACU....G...G...A........................G.UC...G...C...A..AC.AG..AC....UAAUG.CA.AUUCUGACUACAU...UCAAUGAAGU....CAAUAUG.G....C.G.CC....G...G..U..U...A.U.U..A..A....U.C.U.G.C...G...G...A...-.....................................G.U...A...G...gU...A...U...C..A.G..G...A..UU..GCU....U..U...A...U...A...A.A........................................................................A...G.AA..CA.....CG...A.AG....U.A...AA..A.CUG.....GG.CU.UUAUGUC..CUUU...U....UCGUGAA.AGC...A.G...-..-.-.U.C...G.U
   NZ_OU594967.1     UAUU....G...G...A........................A.GC...U...A...A..AA.AU..AA....CACGG.CC.AUGUUAACGACGU...UUAACGAAGU....UAAUAUG.A....A.G.CC....A...A..U..C...A.U.G..G..A....A.C.U.G.C...G...U...A...A.....................................A.A...A...A....U...A...U...C..G.U..G...A..UG..CUU....U..U...G...A...A...G.A........................................................................A...C.GA..CA.....CG...G.UG....U.U...CG..U.UUA.....GG.GU.UUAUGUC..UUUC...U....AUGUCAA.AGC...U.G...U..U.G.U.U...G.A
   NZ_OU907312.1     UACU....A...G...A........................A.GC...A...A...A..AC.AG..AG....CACCG.CC.AUGUUAACUACCU...UUAACGAAGU....UAAUAUG.C....A.G.CC....A...A..U..G...A.U.G..C..A....A.C.U.U.C...G...-...-...-ccgcga......................acuggg...G.G...A...G....A...C...C...U..U.U..G...A..--..---....-..-...-...-...G...A.A........................................................................G...C.AG..CA.....CG...G.UG....U.G...CG..G.UUG.....GG.CU.UUAUGUC..CUUC...U....UUGUUAA.AGC...A.G...U..C.G.U.U...U.U
   NZ_OW370493.1     UGAA....A...C...A........................A.UC...G...C...A..AA.AU..AC....CGCAG.CU.AUUUUAACAACUU...UUAAUGAAAU....UGAUAUG.U....U.G.AA....A...G..U..U...A.U.U..A..A....U.U.U.G.C...G...U...A...U.....................................G.C...A...G....U...A...U...C..G.U..G...A..AG..AGU....U..C...G...A...G...A.A........................................................................G...A.AG..CA.....UG...G.UG....U.U...AA..G.CUG.....GG.GU.UUAUGUC..AUUC...U....---UUGU.AAA...A.G...C..U.A.C.U...A.U
   NZ_OX336425.1     AGUA....G...-...C........................U.GC...U...A...A..AA.AC..GA....AACAG.CA.AUGUUAACGACUU...UCAAUGAAGU....UAACAUG.A....C.G.CC....A...A..U.cA...A.C.C..A..A....A.U.U.C.G...-...U...A...A.....................................C.G...A...A....U...A...C...A..A.-..-...A..GA..UGC....U..U...U...C...A...A.A........................................................................G...C.AA..AAcauggUG...G.UC....U.U...GG..U.UUA.....GG.AU.UCAUGUC..AUUC...U....---UUAC.AAA...A.G...C..A.G.U.U...A.C
   NZ_OX366324.1     UGAA....A...G...C........................A.UC...G...C...A..AA.AU..AC....UGCUG.CA.AUACUGACCACGU...UCAAUGAAAU....UGACAUG.A....A.A.AA....U...G..U..C...A.U.G..G..A....U.C.U.G.A...G...G...G...C.....................................A.A...A...G....U...A...U...A..A.A..G...A..AA..CUU....U..U...G...A...A...A.A........................................................................G...A.AA..UA.....UG...G.AA....U.A...AA..A.CUG.....GG.UU.UCAUGUC..GUUU...U....UUAUAAA.GGC...A.G...C..A.G.U.G...C.A
   NZ_OX366331.1     UGAA....A...G...C........................A.UC...G...C...A..AA.AU..AC....UGCUG.CA.AUACUGACCACGU...UCAAUGAAAU....UGACAUG.A....A.A.AA....C...G..U..C...A.U.G..G..A....U.C.U.G.A...G...G...G...C.....................................A.A...A...G....U...A...U...A..A.A..G...A..AA..CUU....U..U...G...A...A...A.A........................................................................G...A.AA..UA.....UG...G.AA....U.A...AA..A.CUG.....GG.UU.UCAUGUC..GUUU...U....UUAUAAA.GGC...A.G...C..A.G.U.G...C.A
   NZ_OX366335.1     UGAA....A...G...C........................G.UC...G...C...A..AA.AU..AC....UGCUG.CA.AUACUGACCACGU...UCAAUGAAAU....UGACAUG.A....A.A.AA....U...G..U..C...A.U.G..G..A....U.C.U.A.A...G...A...G...C.....................................A.A...A...A....U...A...U...A..A.G..G...A..AA..UUU....U..U...G...A...A...A.A........................................................................G...A.AA..UA.....CG...G.AA....U.A...AA..A.CUA.....GG.UU.UCAUGUC..GUUU...U....UUAUAAA.GGC...A.G...C..A.G.U.G...C.A
   NZ_OX366390.1     UGAA....A...G...C........................A.UC...G...C...A..AA.AU..AC....UGCUG.CA.AUACUGACCACGU...UCAAUGAAAU....UGACAUG.A....A.A.AA....C...G..U..C...A.U.G..G..A....U.C.U.G.A...G...G...G...C.....................................A.A...A...G....U...A...U...A..A.A..G...A..AG..CUU....U..U...G...A...A...A.A........................................................................G...A.AA..UA.....CG...G.AA....U.A...AA..A.CUG.....GG.UU.UCAUGUC..GUUU...U....UUAUAAA.GGC...A.G...C..A.G.U.G...C.A
   NZ_OX366391.1     UGAA....A...G...C........................A.UC...G...C...A..AA.AU..AC....UGCUG.CA.AUACUGACCACGU...UCAAUGAAAU....UGACAUG.A....A.A.AA....U...G..U..C...A.U.G..G..A....U.C.U.A.A...G...A...G...C.....................................A.A...A...A....U...A...U...A..A.G..G...A..AA..UUU....U..U...G...A...A...A.A........................................................................G...A.AA..UA.....CG...G.AA....U.A...AA..A.CUA.....GG.UU.UCAUGUC..GUUU...U....UUAUAAA.GGC...A.G...C..A.G.U.G...C.A


   Structure         ((((.....................................).))...).................((.....((((.((...(((...(((((........((((.......(((((.(....(.(.((..................(.(.(..(..(......(.(.(.(.....................................................).)...)...).....................(..(.......(..(((..................................................................................................)...).)).........))...........).)...))..).........)).)).))))))...))))........)))))...)))...).)...)..).).).....).)


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sdhC-sdhD-sdhA-sdhB-sucA-sucB-sucC-sucD-sdhX



Position: 7157-7276, Conformation: #1







97% 90% 75% 50% Nucleotide present N N N Nucleotide identify E < 0.1 Base-pair covariation E < 0.05 Helix-level covariation 97% 90% 75%

Y R Y A R R C A R A R R Y G C A U G Y U R A C A C U U Y A A Y G A R G U R A Y A U G R C C R U A U R G A Y U C G Y R R R Y A Y R R G A U U Y R A R R A R R C A Y G G Y R U R Y U G G Y U U Y A U G U C U U C U Y R Y A A R G C G Y R Y G 5'