sdhC-sdhD-sdhA-sdhB-sucA-sucB-sucC-sucD-sdhX



Position: 6557-6716, Conformation: #1







DMS reactivity > 1.0 0.0 0.4 0.7 G/U/No data
Position: 0 (position.label in template: 0.5')5' Position: 1 (position.label in template: 1.A) Reactivity: nanA Position: 2 (position.label in template: 2.A) Reactivity: nanA Position: 3 (position.label in template: 3.C) Reactivity: nanC Position: 4 (position.label in template: 4.G) Reactivity: nanG Position: 5 (position.label in template: 5.U) Reactivity: nanU Position: 6 (position.label in template: 6.C) Reactivity: nanC Position: 7 (position.label in template: 7.G) Reactivity: nanG Position: 8 (position.label in template: 8.A) Reactivity: nanA Position: 9 (position.label in template: 9.A) Reactivity: nanA Position: 10 (position.label in template: 10.U) Reactivity: nanU Position: 11 (position.label in template: 11.A) Reactivity: nanA Position: 12 (position.label in template: 12.A) Reactivity: nanA Position: 13 (position.label in template: 13.A) Reactivity: nanA Position: 14 (position.label in template: 14.U) Reactivity: nanU Position: 15 (position.label in template: 15.A) Reactivity: nanA Position: 16 (position.label in template: 16.A) Reactivity: nanA Position: 17 (position.label in template: 17.A) Reactivity: nanA Position: 18 (position.label in template: 18.G) Reactivity: nanG Position: 19 (position.label in template: 19.G) Reactivity: nanG Position: 20 (position.label in template: 20.A) Reactivity: nanA Position: 21 (position.label in template: 21.U) Reactivity: nanU Position: 22 (position.label in template: 22.A) Reactivity: nanA Position: 23 (position.label in template: 23.C) Reactivity: nanC Position: 24 (position.label in template: 24.A) Reactivity: nanA Position: 25 (position.label in template: 25.C) Reactivity: nanC Position: 26 (position.label in template: 26.A) Reactivity: nanA Position: 27 (position.label in template: 27.A) Reactivity: nanA Position: 28 (position.label in template: 28.U) Reactivity: nanU Position: 29 (position.label in template: 29.G) Reactivity: nanG Position: 30 (position.label in template: 30.A) Reactivity: nanA Position: 31 (position.label in template: 31.G) Reactivity: nanG Position: 32 (position.label in template: 32.U) Reactivity: nanU Position: 33 (position.label in template: 33.A) Reactivity: nanA Position: 34 (position.label in template: 34.G) Reactivity: nanG Position: 35 (position.label in template: 35.C) Reactivity: nanC Position: 36 (position.label in template: 36.G) Reactivity: nanG Position: 37 (position.label in template: 37.U) Reactivity: nanU Position: 38 (position.label in template: 38.A) Reactivity: 1A Position: 39 (position.label in template: 39.G) Reactivity: nanG Position: 40 (position.label in template: 40.A) Reactivity: 0A Position: 41 (position.label in template: 41.U) Reactivity: nanU Position: 42 (position.label in template: 42.A) Reactivity: 1A Position: 43 (position.label in template: 43.U) Reactivity: nanU Position: 44 (position.label in template: 44.U) Reactivity: nanU Position: 45 (position.label in template: 45.C) Reactivity: 0C Position: 46 (position.label in template: 46.U) Reactivity: nanU Position: 47 (position.label in template: 47.G) Reactivity: nanG Position: 48 (position.label in template: 48.G) Reactivity: nanG Position: 49 (position.label in template: 49.U) Reactivity: nanU Position: 50 (position.label in template: 50.C) Reactivity: 0.5C Position: 51 (position.label in template: 51.C) Reactivity: 1C Position: 52 (position.label in template: 52.C) Reactivity: 0C Position: 53 (position.label in template: 53.U) Reactivity: nanU Position: 54 (position.label in template: 54.G) Reactivity: nanG Position: 55 (position.label in template: 55.A) Reactivity: 0.5A Position: 56 (position.label in template: 56.C) Reactivity: 0C Position: 57 (position.label in template: 57.C) Reactivity: 0C Position: 58 (position.label in template: 58.U) Reactivity: nanU Position: 59 (position.label in template: 59.G) Reactivity: nanG Position: 60 (position.label in template: 60.C) Reactivity: 0.5C Position: 61 (position.label in template: 61.C) Reactivity: 0C Position: 62 (position.label in template: 62.U) Reactivity: nanU Position: 63 (position.label in template: 63.G) Reactivity: nanG Position: 64 (position.label in template: 64.A) Reactivity: 1A Position: 65 (position.label in template: 65.A) Reactivity: 0A Position: 66 (position.label in template: 66.U) Reactivity: nanU Position: 67 (position.label in template: 67.C) Reactivity: 0C Position: 68 (position.label in template: 68.C) Reactivity: 0C Position: 69 (position.label in template: 69.G) Reactivity: nanG Position: 70 (position.label in template: 70.U) Reactivity: nanU Position: 71 (position.label in template: 71.A) Reactivity: 0A Position: 72 (position.label in template: 72.G) Reactivity: nanG Position: 73 (position.label in template: 73.C) Reactivity: 1C Position: 74 (position.label in template: 74.C) Reactivity: 0C Position: 75 (position.label in template: 75.G) Reactivity: nanG Position: 76 (position.label in template: 76.A) Reactivity: 0.5A Position: 77 (position.label in template: 77.U) Reactivity: nanU Position: 78 (position.label in template: 78.G) Reactivity: nanG Position: 79 (position.label in template: 79.C) Reactivity: 0.5C Position: 80 (position.label in template: 80.C) Reactivity: 0C Position: 81 (position.label in template: 81.A) Reactivity: 0.5A Position: 82 (position.label in template: 82.C) Reactivity: 1C Position: 83 (position.label in template: 83.C) Reactivity: 0C Position: 84 (position.label in template: 84.G) Reactivity: nanG Position: 85 (position.label in template: 85.U) Reactivity: nanU Position: 86 (position.label in template: 86.C) Reactivity: 0C Position: 87 (position.label in template: 87.G) Reactivity: nanG Position: 88 (position.label in template: 88.C) Reactivity: 0C Position: 89 (position.label in template: 89.A) Reactivity: 0.5A Position: 90 (position.label in template: 90.A) Reactivity: 1A Position: 91 (position.label in template: 91.C) Reactivity: 0.5C Position: 92 (position.label in template: 92.C) Reactivity: 0C Position: 93 (position.label in template: 93.U) Reactivity: nanU Position: 94 (position.label in template: 94.G) Reactivity: nanG Position: 95 (position.label in template: 95.G) Reactivity: nanG Position: 96 (position.label in template: 96.C) Reactivity: 0C Position: 97 (position.label in template: 97.A) Reactivity: 0.5A Position: 98 (position.label in template: 98.U) Reactivity: nanU Position: 99 (position.label in template: 99.A) Reactivity: 0A Position: 100 (position.label in template: 100.A) Reactivity: 0A Position: 101 (position.label in template: 101.A) Reactivity: 1A Position: 102 (position.label in template: 102.A) Reactivity: 0.5A Position: 103 (position.label in template: 103.A) Reactivity: 1A Position: 104 (position.label in template: 104.A) Reactivity: 0A Position: 105 (position.label in template: 105.C) Reactivity: 0C Position: 106 (position.label in template: 106.C) Reactivity: 0C Position: 107 (position.label in template: 107.C) Reactivity: 0.5C Position: 108 (position.label in template: 108.G) Reactivity: nanG Position: 109 (position.label in template: 109.G) Reactivity: nanG Position: 110 (position.label in template: 110.C) Reactivity: 0C Position: 111 (position.label in template: 111.G) Reactivity: nanG Position: 112 (position.label in template: 112.A) Reactivity: 0A Position: 113 (position.label in template: 113.C) Reactivity: 0C Position: 114 (position.label in template: 114.G) Reactivity: nanG Position: 115 (position.label in template: 115.C) Reactivity: 0C Position: 116 (position.label in template: 116.A) Reactivity: 1A Position: 117 (position.label in template: 117.G) Reactivity: nanG Position: 118 (position.label in template: 118.U) Reactivity: nanU Position: 119 (position.label in template: 119.C) Reactivity: 0C Position: 120 (position.label in template: 120.G) Reactivity: nanG Position: 121 (position.label in template: 121.U) Reactivity: nanU Position: 122 (position.label in template: 122.A) Reactivity: 0.5A Position: 123 (position.label in template: 123.C) Reactivity: 0C Position: 124 (position.label in template: 124.G) Reactivity: nanG Position: 125 (position.label in template: 125.U) Reactivity: nanU Position: 126 (position.label in template: 126.G) Reactivity: nanG Position: 127 (position.label in template: 127.A) Reactivity: 0A Position: 128 (position.label in template: 128.U) Reactivity: nanU Position: 129 (position.label in template: 129.G) Reactivity: nanG Position: 130 (position.label in template: 130.A) Reactivity: 1A Position: 131 (position.label in template: 131.A) Reactivity: 0A Position: 132 (position.label in template: 132.G) Reactivity: nanG Position: 133 (position.label in template: 133.U) Reactivity: nanU Position: 134 (position.label in template: 134.G) Reactivity: nanG Position: 135 (position.label in template: 135.C) Reactivity: 0C Position: 136 (position.label in template: 136.U) Reactivity: nanU Position: 137 (position.label in template: 137.G) Reactivity: nanG Position: 138 (position.label in template: 138.G) Reactivity: nanG Position: 139 (position.label in template: 139.U) Reactivity: nanU Position: 140 (position.label in template: 140.A) Reactivity: 1A Position: 141 (position.label in template: 141.G) Reactivity: nanG Position: 142 (position.label in template: 142.A) Reactivity: 0A Position: 143 (position.label in template: 143.A) Reactivity: 0.5A Position: 144 (position.label in template: 144.A) Reactivity: 0.5A Position: 145 (position.label in template: 145.U) Reactivity: nanU Position: 146 (position.label in template: 146.C) Reactivity: 0C Position: 147 (position.label in template: 147.G) Reactivity: nanG Position: 148 (position.label in template: 148.A) Reactivity: 1A Position: 149 (position.label in template: 149.A) Reactivity: 1A Position: 150 (position.label in template: 150.A) Reactivity: 0A Position: 151 (position.label in template: 151.C) Reactivity: 0C Position: 152 (position.label in template: 152.U) Reactivity: nanU Position: 153 (position.label in template: 153.G) Reactivity: nanG Position: 154 (position.label in template: 154.A) Reactivity: 1A Position: 155 (position.label in template: 155.C) Reactivity: 0C Position: 156 (position.label in template: 156.A) Reactivity: 0.5A Position: 157 (position.label in template: 157.A) Reactivity: 0A Position: 158 (position.label in template: 158.A) Reactivity: 1A Position: 159 (position.label in template: 159.G) Reactivity: nanG Position: 160 (position.label in template: 160.U) Reactivity: nanU Position: 161 (position.label in template: 161.G) Reactivity: nanG Position: 162 (position.label in template: 162.G) Reactivity: nanG Position: 163 (position.label in template: 163.U) Reactivity: nanU Position: 164 (position.label in template: 164.A) Reactivity: 0.5A Position: 165 (position.label in template: 165.C) Reactivity: nanC Position: 166 (position.label in template: 166.U) Reactivity: nanU Position: 167 (position.label in template: 167.G) Reactivity: nanG Position: 168 (position.label in template: 168.G) Reactivity: nanG Position: 169 (position.label in template: 169.A) Reactivity: nanA Position: 170 (position.label in template: 170.A) Reactivity: nanA Position: 171 (position.label in template: 171.G) Reactivity: nanG Position: 172 (position.label in template: 172.U) Reactivity: nanU Position: 173 (position.label in template: 173.A) Reactivity: nanA Position: 174 (position.label in template: 174.C) Reactivity: nanC Position: 175 (position.label in template: 175.C) Reactivity: nanC Position: 176 (position.label in template: 176.G) Reactivity: nanG Position: 177 (position.label in template: 177.G) Reactivity: nanG Position: 178 (position.label in template: 178.C) Reactivity: nanC Position: 179 (position.label in template: 179.A) Reactivity: nanA Position: 180 (position.label in template: 180.U) Reactivity: nanU Position: 181 (position.label in template: 181.C) Reactivity: nanC Position: 182 (position.label in template: 182.A) Reactivity: nanA Position: 183 (position.label in template: 183.G) Reactivity: nanG Position: 184 (position.label in template: 184.C) Reactivity: nanC Position: 185 (position.label in template: 185.A) Reactivity: nanA Position: 186 (position.label in template: 186.G) Reactivity: nanG Position: 187 (position.label in template: 187.A) Reactivity: nanA Position: 188 (position.label in template: 188.C) Reactivity: nanC Position: 189 (position.label in template: 189.G) Reactivity: nanG Position: 190 (position.label in template: 190.G) Reactivity: nanG Position: 191 (position.label in template: 191.C) Reactivity: nanC Position: 192 (position.label in template: 192.A) Reactivity: nanA Position: 193 (position.label in template: 193.U) Reactivity: nanU Position: 194 (position.label in template: 194.U) Reactivity: nanU Position: 195 (position.label in template: 195.C) Reactivity: nanC Position: 196 (position.label in template: 196.U) Reactivity: nanU Position: 197 (position.label in template: 197.G) Reactivity: nanG Position: 198 (position.label in template: 198.G) Reactivity: nanG Position: 199 (position.label in template: 199.A) Reactivity: nanA Position: 200 (position.label in template: 200.U) Reactivity: nanU Position: 201 (position.label in template: 201.3')3' 10 20 30 50 100 150


sdhC-sdhD-sdhA-sdhB-sucA-sucB-sucC-sucD-sdhX



Position: 6557-6716, Conformation: #1







Retained alignments:


   NC_002977.6       G..C.G..C....A....U..C...G...A....A......A...U.......C..........A......G.U.G.U..G.--...-.C.C....U.C....C.U.C.U..G.C.CU.....G.......A..GUC..CGU.....CA.......G..CG.A..C.G..C..CA..A...-..G..U..UGC.UgGA.C.UGGCACAAGAACGU...C.G..............G.C.G.A...G.A.C.C.....G.U..G..GgC.....A..AG..-.G.G...C.GA...AA..A...C...C...U...GGU...CGAC..CUCGAAACCGACAAG...GU.GG.UGU..U..G..GA.............................A.G.U.U.CC...GG...C....UC.C..GG..A..G..G...A.C..G..GG....G.U..G.G
   NC_003103.1       U..A.U..G....A....G..A...G...U....U......A...A.......A..........A......U.U.AuA..G.UA...C.C.G....U.C....G.C.U.U..G.-.GG.....G.......A..GUC..CAU.....AA.......C..AG.A..A.G..C..AA..C...U..A..U..UGC.C.AA.A.UGGUAUAAGAAACA...A.G..............G.C.G.A...U.U.C.G.....G.U..U..A.A.....A..AC..C.G.A...U.GA...AU..U...A...C...U...GUU...AGAA..AUCGAAACCGAAAAA...GU.--.GAC..UuuA..GA.............................A.G.U.U.AA...UG...C....UC.C..UU..G..C..A...A.U..G..GU....A.C..U.A
   NC_003910.7       U..G.A..C....A....A..C...C...G....A......A...A.......U..........-......C.A.A.A..G.UU...C.C.G....G.U....A.U.U.-..A.C.CU.....G.......A..AUC..AGU.....UG.......C..UG.A..U.G..C..AA..C...A..G..U..AGC.A.AC.U.UGGCAUGUACAAGU...U.G..............G.U.G.A...A.A.A.A.....U.U..U..A.C.....U..CG..U.G.A...U.CA...AG..U...A...C...U...UGU...AGAU..AUUGAAACGGACAAA...GU.AG.UAU..U..A..GA.............................A.G.U.U.CC...UG...C....AA.C..UU..G..C..G...A.C..G..GU....G.U..U.A
   NC_003911.12      -..-.-..-....-....-..C...G...A....A......G...-.......-..........-......U.U.C.G..U.GU...C.C.C....C.A....C.G.C.U..U.G.GC.....G.......A..AUC..CGU.....GA.......C..CG.A..G.G..C..CA..C...C..G..U..GGC.C.AC.C.UGGUUCAAGAAACC...C.G..............G.C.G.A...C.G.C.Cguggc-.-..C..G.Uc...gA..CG..A.G.A...U.--...GC..U...C...-...U...GUG...AG--..CUGGAAACCGACAAG...GU.G-.-AC..C..GucGA.............................G.G.U.C.CC...CG...C....CC.C..UG..C..C..G...C.C..G..GU....G.U..G.A
   NC_004347.2       C..A.U..G....A....G..U...A...U....C......G...A.......A..........A......U.C.A.A..G.GU...A.C.C....C.G....U.A.C.U..G.C.CA.....G.......A..AUC..UGU.....UG.......C..CG.A..U.G..C..GA..C...U..A..U..CGC.C.AC.U.UGGCAUGUAAAAGU...G.G..............G.A.C.A...A.C.A.A.....G.U..U..U.C.....U..CG..U.G.A...U.CA...AA..A...U...C...U...GGU...UGAU..AUUGAAACUGACAAA...GU.UG.UAC..U..A..GA.............................A.G.U.G.GU...UG...C....AC.C..AG..A..A..G...A.U..G..GU....C.A..U.A
   NC_004556.1       G..A.G..C....A....C..C...G...A....A......G...U.......U..........Aa....aG.U.C.C..C.GG...U.A.-....U.U....A.C.C.U..-.-.--.....G.......A..AUC..CGU.....UU.......C..AG.A..C.G..C..CA..C...C..A..U..UGC.C.AG.C.UGGCACAAAAAAGC...C.G..............G.U.G.A...G.A.U.U.....G.U..C..A.A.....A..CG..C.G.A...U.GA...GA..A...C...A...U...CGU...CGAC..CUGGAGACCGACAAA...GU.UG.UAU..U..G..GA.............................A.G.U.C.CC...CU...C....CC.C..UG..U..C..G...A.C..G..GC....G.U..C.U
   NC_004578.1       U..A.A..U....G....G..C..uA...U....C......G...A.......U..........A......U.-.C.A..A.AG...C.C.C....C.C....U.C.U.U..U.C.CC....gG.......A..AUC..CGU.....UG.......C..CG.A..U.G..G..CA..C...C..A..U..UUC.C.AA.G.UGGUACAAAAAAGA...G.G..............G.U.G.A...U.G.C.G.....G.U..A..A.A.....G..CG..C.G.A...C.GA...GA..U...G...C...U...GGU...UGAC..AUCGAGACUGACAAG...GU.UG.UCC..U..G..GA.............................A.G.U.A.CU...GG...C....CG.A..AG..C..U..G...A.U..G..GC....G.U..G.A
   NC_004603.1       U..G.A..C....A....A..U...U...G....-......-...A.......A..........A......U.U.C.U..G.GU...U.C.C....A.G....A.U.U.U..A.C.CU.....G.......A..AUC..AGU.....UG.......C..UG.A..U.G..C..AA..C...C..G..U..GGC.G.AC.A.UGGCACAAACAACC...A.G..............G.C.G.A...C.A.C.C.....G.U..A..G.A.....G..CG..U.G.A...U.GA...AG..U...U...C...U...GGU...UGAU..AUUGAAACUGACAAA...GU.UG.UAC..U..A..GA.............................A.G.U.G.CC...AG...C....UC.C..AG..A..A..G...C.C..G..GC....G.U..U.U
   NC_004757.1       G..C.U..G....A....U..C...G...A....A......G...U.......C..........A......A.A.G.U..C.CC..cG.C.A....U.U....A.U.C.A..G.A.--.....-.......-..AUC..GGU.....AG.......C..GG.A..A.G..C..CA..C...A..U..U..GAU.C.AA.C.UGGCAUAAACAGCC...A.G..............G.C.G.A...G.U.A.U.....G.U..U..G.A.....A..CG..G.G.G...U.GA...GA..A...C...C...U...GAU...CGAC..AUCGAAACUGAUAAG...GU.CG.UAC..U..G..GA.............................A.C.U.C.CC...UG...C....-U.C..CG..C..A..G...UcC..G..GA....A.U..C.C
   NC_005126.1       G..A.G..U....A....G..C...G...U....A......G...A.......U..........A......U.U.C.U..G.GU...U.C.C....G.G....A.U.C.U..G.C.CU.....G.......A..GUC..UGU.....UG.......C..UG.A..U.G..C..CA..C...U..G..U..GGC.A.GU.C.UGGCACAAAAAACA...G.G..............G.U.G.A...C.C.G.U.....G.U..U..G.A.....A..CG..U.G.A...U.GA...AG..U...G...C...U...GGU...UGAA..AUCGAAACAGAUAAA...GU.UG.UGC..U..G..GA.............................A.G.U.G.CC...GG...C....--.C..AG.uG..A..G...G.C..G.gGU....G.U..U.U
   NC_005966.1       G..G.C..A....A....C..C...G...A....A......A...U.......U..........-......-.A.A.A..G.CA...-.C.C....G.G....U.A.U.U..C.C.CA.....G.......A..GUC..AGU.....UG.......C..AG.A..U.G..G..AA..C...C..A..U..UGC.A.AC.A.UGGCAUAAGAAAGU...U.G..............G.G.G.A...A.G.C.A.....G.U..A..U.C.....A..CG..U.G.A...U.GA...AG..U...C...A...U...UUG...UGAU..AUUGAAACUGAUAAA...GU.UG.UUU..U..A..GA.............................A.G.-.-.-U...GG...U....UG.C..UC..C..A..G...C.U..G..AU....G.G..U.C
   NC_006300.1       G..A.G..U....A....A..C...U...U....U......G...A.......U..........A......U.U.A.U..C.AC...C.C.C....U.G....A.U.U.U..A.C.CG.....G.......A..AUC..CGU.....GG.......C..GG.A..U.G..C..AA..C...C..G..U..UGU.A.AA.A.UGGCAUAAAGCGGU...U.G..............G.C.G.A...U.A.A.A.....G.U..A..C.G.....G..CG..C.G.A...C.GA...AG..U...A...U...U...GGU...UGAA..AUUGAAACGGAUAAA...GU.UG.UAC..U..G..GA.............................A.G.U.A.CC...GG...C....GC.U..AA..A..U..G...A.C..G..GU....A.U..U.A
   NC_006512.1       G..G.C..G....A....U..U...G...A....U......A...U.......U..........A......A.A.G.U..U.CC...U.C.A...aU.U....A.C.C.C..G.A.--.....-.......-..GUC..UGU.....UG.......C..AG.A..U.G..C..AA..C...A..A..U..UGC.A.AC.A.UGGCACGUAAAACC...U.G..............G.C.G.A...U.A.A.A.....G.U..G..U.C.....U..CG..C.G.A...C.CA...GA..A...U...C...U...GGU...UGAC..AUCGAAACCGACAAG...GU.AG.UGC..U..G..GA.............................A.G.U.G.GU...UG...C....GG.A..AG..C..A..G...A.C..G..GU....G.U..U.U
   NC_007292.1       G..A.G..U....A....G..U...A...U....U......G...A.......C..........A......U.U.G.U..G.GU...U.C.C....G.A....A.U.U.U..A.C.CA.....G.......A..AUC..GGU.....UG.......C..AG.A..C.G..C..UA..C...U..G..U..UGC.U.GU.U.UGGCAUAAAAAAUC...A.G..............G.A.G.A...U.A.C.A.....G.U..U..A.A.....A..CA..A.G.A...U.GA...UA..U...U...U...U...ACU...GGAA..AUAGAAACAGACAAA...AU.UA.UGU..U..A..GA.............................A.A.U.U.CC...CG...C....UC.C..AA..-..A..C...A.C..A.gGA....A.U..U.U
   NC_007626.1       G..A.C..C....A....C..C...G...A....A......A...U.......C..........A......A.G.G.U..G.CC...C.-.-....-.A....C.C.C.U..G.G.GC.....G.......A..GUC..CGU.....GA.......C..CG.A..A.G..C..CA..C...C..A..U..CGC.C.AA.G.UGGUUCAAGAAUGU...G.G..............G.C.G.A...U.G.C.C.....G.U.cC..G.C.....G..C-..C.G.A...U.GA...GC..C...C...C...U...GGU...CGAA..CUGGAAACCGACAAG...GU.C-.-AC..C..GucGA.............................G.G.U.C.A-...-A...C....-G.C..GC..C..C..G...C.C..G..CC....G.G..-.C
   NC_007645.1       U..G.G..C...gA....U..C...G...A....A......A...-.......-..........-......U.U.A.A..A.GC...U.C.C....U.-....A.C.U.U..U.C.CC....aG.......A..GUC..CGU.....CG.......C..GG.A..C.G..G..CG..U...A..G..U..GGC.G.AC.U.UGGCAUAAAAAACC...U.G..............G.G.G.A...A.U.C.C.....G.U..G..G.C.....U..AG..G.G.A...C.GA...GC..U...A...C...U...GGU...CGAU..AUCGAGACGGAUAAA...GU.GG.UGU..U..G..GA.............................G.G.U.U.GU...AG...C....GC.C..UG..C..U..G...C.C..G..GC....G.U..C.A
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   NZ_LT906479.1     G..A.G..U....A....G..C...G...U....A......G...A.......U..........A......U.U.C.U..G.GU...U.C.C....U.G....A.C.C.U..U.C.CU.....G.......A..AUC..GGU.....UG.......C..CG.A..U.G..C..GA..C...C..G..U..GGC.C.AC.C.UGGCACAAAAAGCC...G.G..............G.C.G.A...C.A.G.C.....G.U..U..C.A.....G..CG..C.G.A...C.GA...AG..U...U...C...U...GGU...CGAA..AUCGAAACCGACAAA...GU.GG.UGC..U..G..GA.............................A.G.U.U.CC...A-...-....GC.C..AG..C.gA..A...G.C..G.gGC....A.U..U.C
   NZ_OU015430.1     G..A.G..C....A....C..C...GagaU....C......A...A.......A..........G......U.U.C.C..G.GU...-.-.-....-.-....-.C.C.U..G.C.CC.....G.......A..AUC..CGU.....UU.......C..CG.A..C.G..C..CA..C...C..A..U..CGC.C.AC.G.UGGCACAAGAAGCC...C.G..............G.C.G.A...C.G.C.G.....G.U..C..A.G.....C..CG..G.G.A...C.GA...GA..A...C...C...U...GGU...CGAC..CUCGAAACCGACAAG...GU.CG.UGC..U..C..GA.............................G.G.U.G.CC...CU...C....GC.C..GG..U..C..G...A.C..G..GC....G.U..G.C
   NZ_OU015521.1     A..U.G..Ac..uA....U..A...A...U....U......G...A.......A..........A......U.U.A.A..A.GU...U.C.C....UaC....G.C.U.C..-.-.--c..cgG.......A..AUC..UGU.....UA.......C..CG.A..U.G..C..UA..C...A..G..U..GGU.A.AA.A.UGGUAUAAAAAAGA...G.G..............G.U.G.A...C.U.U.U.....A.U..U..U.U.....U..CG..G.G.A...U.GA...GA..A...C...U...U...AAU...CGAC..UUAGAAACUGAUAAA...GU.AA.UGU..U..A..GA.............................A.A.U.U.CC...AG...C....AC.C..AA..A..A..G...A.U..G..GC...aU.U..A.U
   NZ_OU343031.1     C..U.A..U....U....A..U...U...G....A......G...A.......U..........-......-.U.A.A..A.GU...U.C.C....G.A....G.G.C.U..U.U.CG.....G.......A..AUC..AGU.....AU.......C..UG.A..A.G..C..UA..C...G..A..U.gCUC.-.GG.C.UGGAAGAAACAACC...A.G..............G.A.G.A...A.G.C.A.....G.U..U..G.U.....A..CA..A.G.A...U.GA...GA..U...A...C...U...GAU...UGAA..AUUGAAACAGAUAAA...GU.UG.UGC..U..U..GA.............................A.G.U.A.CC...UG...C....UC.C..AG..C..C..U...C.G..G..GC....A.U..A.-
   NZ_OU594967.1     G..A.C..C....A....U..C...G...A....A......A...U.......U..........A......-.-.-.A..G.GU...A.C.C....U.G....A.U.C.U..U.C.CC.....G.......A..AUC..GGU.....CG.......C..UG.A..U.G..C..AA..C...U..A..U..UGC.A.AC.C.UGGAAUAAACAGGU...A.G..............G.C.G.A...U.U.C.A.....G.U..U..G.A.....A..AG..A.G.A...C.GA...AG..U...C...A...U...UGU...UGAG..AUUGAAACAGAUAAA...GU.UG.UCC..U..U..GA.............................A.A.U.C.CC...AG...C....UC.U..GG..A..A..G...C.C..G..GU....G.U..U.U
   NZ_OU907312.1     G..A.A..A....A....A..A...A...U....U......G...A.......A..........A......U.U.A.U..G.GU...U.C.C....U.G....A.U.U.U..A.C.CA.....G.......A..AUC..AGU.....GG.......C..GG.A..U.G..C..CA..C...C..G..U..AGC.G.AC.C.UGGCAUAAACAGCC...A.G..............G.A.G.A...U.G.C.G.....G.U..A..C.A.....G..UG..U.G.A...U.GA...AG..U...G...U...U...GGU...UGAA..AUUGAAACUGAUAAA...GU.UG.UUC..U..A..GA.............................G.G.U.U.CC...CG...CcaccAC.C..GC..C..G..G...A.G..U..-A....U.U..A.C
   NZ_OW370493.1     G..A.C..U....A....U..U...G...A....A......A...U.......U..........A......-.-.C.A..G.UU...C.C.A....U.C....C.C.U.U..G.-.GA.....G.......A..GUC..AGU.....AU.......C..AG.A..G.G..C..UA..C...U..A..U..UGC.C.AA.G.UGGCAUAAAAAACA...A.G..............G.A.G.A...U.G.U.G.....G.U..U..A.A.....A..GU..G.G.A...U.GA...GC..U...A...C...U...UUU...AGAG..CUUGAAACAGAAAAA...GU.UA.CGU..U..G..GA.............................A.G.U.A.AA...UG...C....AG.U..UU..C..A..-...U.C..U..GG....G.G..U.A


   Structure         (..(.(..(............(...(...(.............................................(.(..(.((.....(.(...........(.(.(....(.(.((................(((..(((.................((.(..(...............(..(..(..(((..........................................).).).)...).).........).)..)..).......)..))....).)...)......))......)...).......)))..............................((.(((..(....................................).).).).))...))........)).)..))............).)..)........).)..).)


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sdhC-sdhD-sdhA-sdhB-sucA-sucB-sucC-sucD-sdhX



Position: 6557-6716, Conformation: #1







97% 90% 75% 50% Nucleotide present N N N Nucleotide identify E < 0.1 Base-pair covariation E < 0.05 Helix-level covariation 97% 90% 75%

R R Y R R R R Y C C Y U Y Y G A R U C G U R C G A G A C R U G C R U G G Y A Y A A R A R Y G G Y G A R G U R C R G A Y G A R Y Y U R U Y G A U Y G A A A C Y G A Y A A R G U G U Y U G A A G U Y Y G C Y C G Y G G Y R Y 5'