sdhC-sdhD-sdhA-sdhB-sucA-sucB-sucC-sucD-sdhX



Position: 6557-6716, Conformation: #0







DMS reactivity > 1.0 0.0 0.4 0.7 G/U/No data
Position: 0 (position.label in template: 0.5')5' Position: 1 (position.label in template: 1.A) Reactivity: nanA Position: 2 (position.label in template: 2.A) Reactivity: nanA Position: 3 (position.label in template: 3.C) Reactivity: nanC Position: 4 (position.label in template: 4.G) Reactivity: nanG Position: 5 (position.label in template: 5.U) Reactivity: nanU Position: 6 (position.label in template: 6.C) Reactivity: nanC Position: 7 (position.label in template: 7.G) Reactivity: nanG Position: 8 (position.label in template: 8.A) Reactivity: nanA Position: 9 (position.label in template: 9.A) Reactivity: nanA Position: 10 (position.label in template: 10.U) Reactivity: nanU Position: 11 (position.label in template: 11.A) Reactivity: nanA Position: 12 (position.label in template: 12.A) Reactivity: nanA Position: 13 (position.label in template: 13.A) Reactivity: nanA Position: 14 (position.label in template: 14.U) Reactivity: nanU Position: 15 (position.label in template: 15.A) Reactivity: nanA Position: 16 (position.label in template: 16.A) Reactivity: nanA Position: 17 (position.label in template: 17.A) Reactivity: nanA Position: 18 (position.label in template: 18.G) Reactivity: nanG Position: 19 (position.label in template: 19.G) Reactivity: nanG Position: 20 (position.label in template: 20.A) Reactivity: nanA Position: 21 (position.label in template: 21.U) Reactivity: nanU Position: 22 (position.label in template: 22.A) Reactivity: nanA Position: 23 (position.label in template: 23.C) Reactivity: nanC Position: 24 (position.label in template: 24.A) Reactivity: nanA Position: 25 (position.label in template: 25.C) Reactivity: nanC Position: 26 (position.label in template: 26.A) Reactivity: nanA Position: 27 (position.label in template: 27.A) Reactivity: nanA Position: 28 (position.label in template: 28.U) Reactivity: nanU Position: 29 (position.label in template: 29.G) Reactivity: nanG Position: 30 (position.label in template: 30.A) Reactivity: nanA Position: 31 (position.label in template: 31.G) Reactivity: nanG Position: 32 (position.label in template: 32.U) Reactivity: nanU Position: 33 (position.label in template: 33.A) Reactivity: nanA Position: 34 (position.label in template: 34.G) Reactivity: nanG Position: 35 (position.label in template: 35.C) Reactivity: nanC Position: 36 (position.label in template: 36.G) Reactivity: nanG Position: 37 (position.label in template: 37.U) Reactivity: nanU Position: 38 (position.label in template: 38.A) Reactivity: 0.5A Position: 39 (position.label in template: 39.G) Reactivity: nanG Position: 40 (position.label in template: 40.A) Reactivity: 1A Position: 41 (position.label in template: 41.U) Reactivity: nanU Position: 42 (position.label in template: 42.A) Reactivity: 0A Position: 43 (position.label in template: 43.U) Reactivity: nanU Position: 44 (position.label in template: 44.U) Reactivity: nanU Position: 45 (position.label in template: 45.C) Reactivity: 1C Position: 46 (position.label in template: 46.U) Reactivity: nanU Position: 47 (position.label in template: 47.G) Reactivity: nanG Position: 48 (position.label in template: 48.G) Reactivity: nanG Position: 49 (position.label in template: 49.U) Reactivity: nanU Position: 50 (position.label in template: 50.C) Reactivity: 0C Position: 51 (position.label in template: 51.C) Reactivity: 0.5C Position: 52 (position.label in template: 52.C) Reactivity: 0.5C Position: 53 (position.label in template: 53.U) Reactivity: nanU Position: 54 (position.label in template: 54.G) Reactivity: nanG Position: 55 (position.label in template: 55.A) Reactivity: 0A Position: 56 (position.label in template: 56.C) Reactivity: 0C Position: 57 (position.label in template: 57.C) Reactivity: 0C Position: 58 (position.label in template: 58.U) Reactivity: nanU Position: 59 (position.label in template: 59.G) Reactivity: nanG Position: 60 (position.label in template: 60.C) Reactivity: 0.5C Position: 61 (position.label in template: 61.C) Reactivity: 0C Position: 62 (position.label in template: 62.U) Reactivity: nanU Position: 63 (position.label in template: 63.G) Reactivity: nanG Position: 64 (position.label in template: 64.A) Reactivity: 0.5A Position: 65 (position.label in template: 65.A) Reactivity: 0.5A Position: 66 (position.label in template: 66.U) Reactivity: nanU Position: 67 (position.label in template: 67.C) Reactivity: 0.5C Position: 68 (position.label in template: 68.C) Reactivity: 0C Position: 69 (position.label in template: 69.G) Reactivity: nanG Position: 70 (position.label in template: 70.U) Reactivity: nanU Position: 71 (position.label in template: 71.A) Reactivity: 1A Position: 72 (position.label in template: 72.G) Reactivity: nanG Position: 73 (position.label in template: 73.C) Reactivity: 0.5C Position: 74 (position.label in template: 74.C) Reactivity: 0C Position: 75 (position.label in template: 75.G) Reactivity: nanG Position: 76 (position.label in template: 76.A) Reactivity: 0.5A Position: 77 (position.label in template: 77.U) Reactivity: nanU Position: 78 (position.label in template: 78.G) Reactivity: nanG Position: 79 (position.label in template: 79.C) Reactivity: 0.5C Position: 80 (position.label in template: 80.C) Reactivity: 0C Position: 81 (position.label in template: 81.A) Reactivity: 0.5A Position: 82 (position.label in template: 82.C) Reactivity: 0.5C Position: 83 (position.label in template: 83.C) Reactivity: 0C Position: 84 (position.label in template: 84.G) Reactivity: nanG Position: 85 (position.label in template: 85.U) Reactivity: nanU Position: 86 (position.label in template: 86.C) Reactivity: 0.5C Position: 87 (position.label in template: 87.G) Reactivity: nanG Position: 88 (position.label in template: 88.C) Reactivity: 0.5C Position: 89 (position.label in template: 89.A) Reactivity: 0.5A Position: 90 (position.label in template: 90.A) Reactivity: 1A Position: 91 (position.label in template: 91.C) Reactivity: 0.5C Position: 92 (position.label in template: 92.C) Reactivity: 0C Position: 93 (position.label in template: 93.U) Reactivity: nanU Position: 94 (position.label in template: 94.G) Reactivity: nanG Position: 95 (position.label in template: 95.G) Reactivity: nanG Position: 96 (position.label in template: 96.C) Reactivity: 0.5C Position: 97 (position.label in template: 97.A) Reactivity: 0A Position: 98 (position.label in template: 98.U) Reactivity: nanU Position: 99 (position.label in template: 99.A) Reactivity: 0A Position: 100 (position.label in template: 100.A) Reactivity: 0A Position: 101 (position.label in template: 101.A) Reactivity: 0.5A Position: 102 (position.label in template: 102.A) Reactivity: 0A Position: 103 (position.label in template: 103.A) Reactivity: 0A Position: 104 (position.label in template: 104.A) Reactivity: 0.5A Position: 105 (position.label in template: 105.C) Reactivity: 1C Position: 106 (position.label in template: 106.C) Reactivity: 0.5C Position: 107 (position.label in template: 107.C) Reactivity: 0C Position: 108 (position.label in template: 108.G) Reactivity: nanG Position: 109 (position.label in template: 109.G) Reactivity: nanG Position: 110 (position.label in template: 110.C) Reactivity: 0C Position: 111 (position.label in template: 111.G) Reactivity: nanG Position: 112 (position.label in template: 112.A) Reactivity: 0A Position: 113 (position.label in template: 113.C) Reactivity: 0C Position: 114 (position.label in template: 114.G) Reactivity: nanG Position: 115 (position.label in template: 115.C) Reactivity: 1C Position: 116 (position.label in template: 116.A) Reactivity: 0A Position: 117 (position.label in template: 117.G) Reactivity: nanG Position: 118 (position.label in template: 118.U) Reactivity: nanU Position: 119 (position.label in template: 119.C) Reactivity: 1C Position: 120 (position.label in template: 120.G) Reactivity: nanG Position: 121 (position.label in template: 121.U) Reactivity: nanU Position: 122 (position.label in template: 122.A) Reactivity: 0A Position: 123 (position.label in template: 123.C) Reactivity: 1C Position: 124 (position.label in template: 124.G) Reactivity: nanG Position: 125 (position.label in template: 125.U) Reactivity: nanU Position: 126 (position.label in template: 126.G) Reactivity: nanG Position: 127 (position.label in template: 127.A) Reactivity: 1A Position: 128 (position.label in template: 128.U) Reactivity: nanU Position: 129 (position.label in template: 129.G) Reactivity: nanG Position: 130 (position.label in template: 130.A) Reactivity: 0.5A Position: 131 (position.label in template: 131.A) Reactivity: 1A Position: 132 (position.label in template: 132.G) Reactivity: nanG Position: 133 (position.label in template: 133.U) Reactivity: nanU Position: 134 (position.label in template: 134.G) Reactivity: nanG Position: 135 (position.label in template: 135.C) Reactivity: 0.5C Position: 136 (position.label in template: 136.U) Reactivity: nanU Position: 137 (position.label in template: 137.G) Reactivity: nanG Position: 138 (position.label in template: 138.G) Reactivity: nanG Position: 139 (position.label in template: 139.U) Reactivity: nanU Position: 140 (position.label in template: 140.A) Reactivity: 0.5A Position: 141 (position.label in template: 141.G) Reactivity: nanG Position: 142 (position.label in template: 142.A) Reactivity: 0.5A Position: 143 (position.label in template: 143.A) Reactivity: 0.5A Position: 144 (position.label in template: 144.A) Reactivity: 0A Position: 145 (position.label in template: 145.U) Reactivity: nanU Position: 146 (position.label in template: 146.C) Reactivity: 1C Position: 147 (position.label in template: 147.G) Reactivity: nanG Position: 148 (position.label in template: 148.A) Reactivity: 0A Position: 149 (position.label in template: 149.A) Reactivity: 0A Position: 150 (position.label in template: 150.A) Reactivity: 1A Position: 151 (position.label in template: 151.C) Reactivity: 1C Position: 152 (position.label in template: 152.U) Reactivity: nanU Position: 153 (position.label in template: 153.G) Reactivity: nanG Position: 154 (position.label in template: 154.A) Reactivity: 0A Position: 155 (position.label in template: 155.C) Reactivity: 1C Position: 156 (position.label in template: 156.A) Reactivity: 0A Position: 157 (position.label in template: 157.A) Reactivity: 1A Position: 158 (position.label in template: 158.A) Reactivity: 0A Position: 159 (position.label in template: 159.G) Reactivity: nanG Position: 160 (position.label in template: 160.U) Reactivity: nanU Position: 161 (position.label in template: 161.G) Reactivity: nanG Position: 162 (position.label in template: 162.G) Reactivity: nanG Position: 163 (position.label in template: 163.U) Reactivity: nanU Position: 164 (position.label in template: 164.A) Reactivity: 0A Position: 165 (position.label in template: 165.C) Reactivity: nanC Position: 166 (position.label in template: 166.U) Reactivity: nanU Position: 167 (position.label in template: 167.G) Reactivity: nanG Position: 168 (position.label in template: 168.G) Reactivity: nanG Position: 169 (position.label in template: 169.A) Reactivity: nanA Position: 170 (position.label in template: 170.A) Reactivity: nanA Position: 171 (position.label in template: 171.G) Reactivity: nanG Position: 172 (position.label in template: 172.U) Reactivity: nanU Position: 173 (position.label in template: 173.A) Reactivity: nanA Position: 174 (position.label in template: 174.C) Reactivity: nanC Position: 175 (position.label in template: 175.C) Reactivity: nanC Position: 176 (position.label in template: 176.G) Reactivity: nanG Position: 177 (position.label in template: 177.G) Reactivity: nanG Position: 178 (position.label in template: 178.C) Reactivity: nanC Position: 179 (position.label in template: 179.A) Reactivity: nanA Position: 180 (position.label in template: 180.U) Reactivity: nanU Position: 181 (position.label in template: 181.C) Reactivity: nanC Position: 182 (position.label in template: 182.A) Reactivity: nanA Position: 183 (position.label in template: 183.G) Reactivity: nanG Position: 184 (position.label in template: 184.C) Reactivity: nanC Position: 185 (position.label in template: 185.A) Reactivity: nanA Position: 186 (position.label in template: 186.G) Reactivity: nanG Position: 187 (position.label in template: 187.A) Reactivity: nanA Position: 188 (position.label in template: 188.C) Reactivity: nanC Position: 189 (position.label in template: 189.G) Reactivity: nanG Position: 190 (position.label in template: 190.G) Reactivity: nanG Position: 191 (position.label in template: 191.C) Reactivity: nanC Position: 192 (position.label in template: 192.A) Reactivity: nanA Position: 193 (position.label in template: 193.U) Reactivity: nanU Position: 194 (position.label in template: 194.U) Reactivity: nanU Position: 195 (position.label in template: 195.C) Reactivity: nanC Position: 196 (position.label in template: 196.U) Reactivity: nanU Position: 197 (position.label in template: 197.G) Reactivity: nanG Position: 198 (position.label in template: 198.G) Reactivity: nanG Position: 199 (position.label in template: 199.A) Reactivity: nanA Position: 200 (position.label in template: 200.U) Reactivity: nanU Position: 201 (position.label in template: 201.3')3' 10 20 30 50 100 150


sdhC-sdhD-sdhA-sdhB-sucA-sucB-sucC-sucD-sdhX



Position: 6557-6716, Conformation: #0







Retained alignments:


   NC_003103.1       U.G.C..U...A....U....A...C....A..A.....A.....U.....A.....U......A......G..G.......-...A.G...U.....A...A.....A....A...U.A..A..........................................................A..U..U.A..U.GagagU....U...A...A...A....A.U-.-.-.-.--.-...-.-.-uauaguacc..........................................................gucgcuuggg.-.--.-.-----GAGUC...CA.U.A.A.C..A..G..A.A..G...C..A..A..C..U..A..U..UG.C.C.AA.A.UGGUAUAAGAAACA...AG....................................................G.CGA...UUCG.G..U..U..A.AAA....C.C.G.AUGA..A.........................UUA.C.UGUUAGAAAUCGAAACCGAAAAAGU.-..-.GAC..UuuA...GA........................................A.G.U.U...A.A...U..G...C...U...C...C.U.....uG.C...-...A.A..U..G
   NC_003361.3       U.A.U..C...G....A....A...A....A..A.....A.....U.....C.....Au....gA......G..G.......U...A.A...A.....U...U.....U....G...U.G..A..........................................................U..U..U.C..U.C....U....A...U...U...A....A.--.-.A.G.AU.G...C.C.U..............................................................................A.AA.C.UCUCCCCAAC...UA.U.G.G.A..A..G..U.U..G...G..A..A..C..A..A..U..CG.U.A.AA.G.UGGCAUAAAAGCAA...UG....................................................G.UGA...UAAG.A..U..A..G.AGU....U.U.G.GGGA..U.........................GUC.C.UCAUUGAAAUAUCAACCGACAAGGC.U..G.UGU..U..A...--........................................-.G.A.G...C.A...U..A...C...A...G...C.A......U.C...U...G.A..-..A
   NC_003910.7       -.-.-..-...G....A....A...A....G..U.....U.....U.....G.....A......A......A..G.......-...G.A...U.....U...A.....A....A...A.A..A..........................................................A..U..G.A..C.A....A...cC...G...A...A....A.UC.A.A.A.GU.U...C.C.G..............................................................................G.UA.U.UACCUGAAUC...AG.U.U.G.C..U..G..A.U..G...C..A..A..C..A..G..U..AG.C.A.AC.U.UGGCAUGUACAAGU...UG....................................................G.UGA...AAAA.U..U..U..A.CUC....G.U.G.AUCA..A.........................GUA.C.UUGUAGAUAUUGAAACGGACAAAGU.A..G.UAU..U..A...GA........................................A.G.U.U...C.C...U..G...C...A...A...CuU......G.C...-...G.A..C..G
   NC_003911.12      -.-.-..-...G....A....G...C....-..A.....U.....C.....G.....A......A......G..G.......A...A.A...A.....U...A.....A....G...C.G..-..........................................................A..U..G.A..C.G....A....U...C...G...A....A.GU.U.C.G.UG.U...C.C.-c...........................................................................c.A.CG.C.UUGGCGAAUC...CG.U.G.A.C..C..G..A.G..G...C..C..A..C..C..G..U..GG.C.C.AC.C.UGGUUCAAGAAACC...CG....................................................G.CGA...CGCC.G..U..G..G.CCG....U.C.G.ACGA..G.........................AUG.C.UCUGUGAGCUGGAAACCGACAAGGU.G..-.-AC..C..Gu.cGA........................................G.G.U.C...C.C...C..G...C...C...C...C.U......G.C...C...G.C..C..G
   NC_004347.2       C.A.U..U...U....U....A...U....A..A.....A.....-.....A.....A......A......G..G.......A...U.C...G.....U...U.....U....U...U.C..A..........................................................U..G..A.G..U.A....U....C...G...A...A....A.UC.A.AgG.UA.C...C.C.-..............................................................................G.UA.C.UGCCAGAAUC...UG.U.U.G.C..C..G..A.U..G...C..G..A..C..U..A..U..CG.C.C.AC.U.UGGCAUGUAAAAGU...GG....................................................G.ACA...ACAA.G..U..U..U.CUC....G.U.G.AUCA..A.........................AAU.C.UGGUUGAUAUUGAAACUGACAAAGU.U..G.UAC..U..A...GA........................................A.G.U.G...G.U...U..G...C...A...C...C.A......G.A...A...G.A..U..G
   NC_004551.1       U.G.G..U...U....A....U...A....A..U.....C.....C.....U.....G......G......A..G.......A...C.U...U.....U...G.....A....A...U.G..A..........................................................G..U..G.A..G.G....A....C...U...U...U....A.UC.C.U.-.-G.C...C.C.-..............................................................................G.CA.U.UGGGUGAAAG...CG.U.A.A.G..U..G..A.G..U...G..C..G..U..C..A..U..AA.C.U.CG.C.UGGCUCAAAGAAGC...UG....................................................G.GGA...UCGG.G..U..U..G.AAG....U.U.G.AUGA..A.........................CCA.C.UGGUUGAAGUCUCAACGGAUAAAGU.U..G.AUA..C..C...GA........................................G.C.U.U...C.C...G..U...C...C...A...C.U......U.U...A...A.C..U..G
   NC_004578.1       A.A.C..C...G....A....A...U....U..A.....A.....G.....G.....A......A......U..U.......A...C.A...G.....A...U.....A....A...U.G..G..........................................................C..U..A.U..C.G....-....-...-...A...U....A.UC.A.A.A.GC.C...C.C.C..............................................................................U.CU.U.UCCCGGAAUC...CG.U.U.G.C..C..G..A.U..G...G..C..A..C..C..A..U..UU.C.C.AA.G.UGGUACAAAAAAGA...GG....................................................G.UGA...UGCG.G..U..A..A.AGC....G.C.G.ACGA..G.........................AUG.C.UGGUUGACAUCGAGACUGACAAGGU.U..G.UCC..U..G...GA........................................A.G.U.A...C.U...G..G...C...C...G...A.A......G.C...U...G.A..U..G
   NC_004603.1       -.G.A.aC...U....A....G...A....A..G.....U.....U.....A.....A......A......G..G.......A...A.G...A.....A...-.....A....C...A.G..A.........................................................uA..U..G.A..C.A...aU....U...G...A...A....A.UU.C.U.G.GU.U...C.C.A..............................................................................G.AU.U.UACCUGAAUC...AG.U.U.G.C..U..G..A.U..G...C..A..A..C..C..G..U..GG.C.G.AC.A.UGGCACAAACAACC...AG....................................................G.CGA...CACC.G..U..A..G.AGC....G.U.G.AUGA..A.........................GUU.C.UGGUUGAUAUUGAAACUGACAAAGU.U..G.UAC..U..A...GA........................................A.G.U.G...C.C...A..G...C...U...C...C.A......G.A...A...G.C..C..G
   NC_004757.1       CuG.A..C...A....A....A...A....U..C.....A.....U.....G.....G......A......G..A.......G...U.U...C.....A...U.....C....A...U.G..C..........................................................U..G..A.U..C.G....A....A...G...U...C....A.AA.G.U.-.--.C...C.C.C..............................................................................G.CA.U.UAUCAGAAUC...GG.U.A.G.C..G..G..A.A..G...C..C..A..C..A..U..U..GA.U.C.AA.C.UGGCAUAAACAGCC...AG....................................................G.CGA...GUAU.G..U..U..G.AAC....G.G.G.GUGA..G.........................AAC.C.UGAUCGACAUCGAAACUGAUAAGGU.C..G.UAC..U..G...GA........................................A.C.U.C...C.C...U..G...C...-...U...C.C......G.C...A...G.U..C.cG
   NC_005126.1       C.G.U..U...G....A....A...U....A..A.....A.....U.....A.....A......A......G..G.......A...U.A...U.....A...A.....A....A...U.G..A..........................................................G..U..A.G..C.G....U....A...G...A...U....A.UU.C.U.G.GU.U...C.C.G..............................................................................G.AU.C.UGCCUGAGUC...UG.U.U.G.C..U..G..A.U..G...C..C..A..C..U..G..U..GG.C.A.GU.C.UGGCACAAAAAACA...GG....................................................G.UGA...CCGU.G..U..U..G.AAC....G.U.G.AUGA..A.........................GUG.C.UGGUUGAAAUCGAAACAGAUAAAGU.U..G.UGC..U..G...GA........................................A.G.U.G...C.C...G..G...C...-...-...C.A......G.U..gA...G.G..C..G
   NC_005966.1       -.-.-..-...G....A....A...C....A..A.....U.....C.....A.....G......G......A..G.......A...G.A...C.....A...A.....A....A...U.A..A..........................................................-..U..G.G..C.A....A....C..cG...A...A....A.UU.A.-.A.AG.C..aC.C.G..............................................................................G.UA.U.UCCCAGAGUC...AG.U.U.G.C..A..G..A.U..G...G..A..A..C..C..A..U..UG.C.A.AC.A.UGGCAUAAGAAAGU...UG....................................................G.GGA...AGCA.G..U..A..U.CAC....G.U.G.AUGA..A.........................GUC.A.UUUGUGAUAUUGAAACUGAUAAAGU.U..G.UUU..U..A...GA........................................A.G.U.G...G.U...U..G...C...U...C...C.A......G.C...U...G.A..U..G
   NC_006300.1       -.-.-..-...G....A....A...U....A..C.....A.....U.....A.....A......AugaaagG..A.......A...U.A...U.....A...A.....A....A...U.G..A..........................................................G..U..A.A..C.U....U....U...G...A...U....A.UU.A.U.C.AC.C...C.C.U..............................................................................G.AU.U.UACCGGAAUC...CG.U.G.G.C..G..G..A.U..G...C..A..A..C..C..G..U..UG.U.A.AA.A.UGGCAUAAAGCGGU...UG....................................................G.CGA...UAAA.G..U..A..C.GGC....G.C.G.ACGA..A.........................GUA.U.UGGUUGAAAUUGAAACGGAUAAAGU.U..G.UAC..U..G...GA........................................A.G.U.A...C.C...G..G...C...G...C...U.A......A.A...U...G.A..C..G
   NC_006512.1       -.-.-..-...-....A....A...C....C..A.....U.....U.....A.....A......A......U..A.......G...G.U...G.....A...A.....G....A...U.G..A..........................................................A..C..C.A..U.GgcgaU....U...G...A...U....A.UU.A.A.A.GU.U...C.C.U..............................................................................C.AA.U.UACCCGAGUC...UG.U.U.G.C..A..G..A.U..G...C..A..A..C..A..A..U..UG.C.A.AC.A.UGGCACGUAAAACC...UG....................................................G.CGA...UAAA.G..U..G..U.CUC....G.C.G.ACCA..G.........................AAU.C.UGGUUGACAUCGAAACCGACAAGGU.A..G.UGC..U..G...GA........................................A.G.U.G...G.U...U..G...C...G...G...A.A......G.C...A...G.A..C..G
   NC_007204.1       -.-.-..-...-....-....-...-....-..-.....-.....-.....-.....-......-......U..A.......A...U.A...U.....C...C.....A....A...-.-..-aucuaagg......................................aguauaucg...A..U..G.G..C.U....-....-...G...A...A....A.UU.A.A.A.GC.C...C.C.C..............................................................................G.UU.U.UUCCAGAAUC...GG.U.U.G.C..C..G..A.U..G...G..U..A..C..A..A..U..CG.U.U.GA.A.UGGCAUGU------...--cacuga...................................agguca.....G.CAA...GUAA.A..C..C..-.---....G.U.G.AUGA..C.........................CUA.U.UAGCUGAAAUCGAAACUGACAAAGU.U..G.UAU..U..G...GA........................................A.G.U.G...G.U...C..G...C...G...C...C.U......G.A...U...A.A..C..G
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   NZ_OU015430.1     -.-.-..-...-....-....-...-....-..-.....-.....G.....G.....A......U......G..U.......C...A.G...C.....C...C.....C....A...U.G..A..........................................................G..C..A.C..C.G....-....-...-...A...G....A.UC.A.A.A.GU.U...C.C.G..............................................................................G.UC.C.UGCCCGAAUC...CG.U.U.U.C..C..G..A.C..G...C..C..A..C..C..A..U..CG.C.C.AC.G.UGGCACAAGAAGCC...CG....................................................G.CGA...CGCG.G..U..C..A.GCC....G.G.G.ACGA..G.........................AAC.C.UGGUCGACCUCGAAACCGACAAGGU.C..G.UGC..U..C...GA........................................G.G.U.G...C.C...C..U...C...G...C...C.G......G.U...C...G.A..C..G
   NZ_OU015584.1     -.-.-..-...U....A....A...U....A..U.....A.....G.....A.....A......A......-..U.......A...U.A...C.....G...C.....A....A...U.A..A..........................................................G..A..A.A..U.G...gC....U...G...A...U....A.UU.G.A.-.--.-...-.-.-gguauuau............................................................uaccaaaaa.-.--.-.UGGGAGAAAG...UG.U.U.G.C..A..G..A.A..G...C..A..A..C..C..A..U..UA.C.A.AG.U.UGGUUAAAAGGUGU...UG....................................................G.GGA...UACA.A..U..U..G.AAG....A.G.G.AUGA..A.........................CCA.A.UAGUAGAGAUAGCAACGGAUAAAGU.G..G.AUU..C..U...GA........................................G.G.U.G...C.C...U..U...C...U...C...C.G......G.C...A...U.C..U..G
   NZ_OU342399.1     U.A.C..C...C....A....U...U....U..A.....U.....U.....A.....A......A......-..C.......A...U.A...A.....A...U.....U....A...A.G..-..........................................................U..U..A.A..U.A....U....G...G...C...U....G.AA.A.U.-.--.-...-.-.-aauaaaca............................................................ugccucguu.-.--.-.UAAGCGAUAC...UA.U.G.G.A..A..G..A.A..G...G..U..A..C..U..G..U..CG.C.A.AC.U.UGGUUUAAAAAAGU...AG....................................................G.AGA...UACA.A..U..U..A.ACG....A.A.G.GUGA..U.........................AUU.U.UAGCUGAAAUUGAAACCGAUAAAGC.U..A.CUA..U..G...GA........................................A.U.UcG...A.A...G..C...C...U...U...C.Ua....uG.C...A...G.G..U..G
   NZ_OU343031.1     C.C.U..U...A....U....A...C....G..U.....A.....U.....U.....C......A......G..G.......A...U.A...Au...aA...C.....A....A...U.G..G..........................................................C..U..A.U..U.A....U....U...G...A...G....A.UU.A.A.A.GU.U...C.C.G..............................................................................A.GG.C.UUUCGGAAUC...AG.U.A.U.C..U..G..A.A..G...C..U..A..C..G..A..U.gCU.C.G.-G.C.UGGAAGAAACAACC...AG....................................................G.AGA...AGCA.G..U..U..G.UAC....A.A.G.AUGA..G.........................AUA.C.UGAUUGAAAUUGAAACAGAUAAAGU.U..G.UGC..U..U...GA........................................A.G.U.A...C.C...U..G...C...U...C...C.A......G.C...C...U.C..G..G
   NZ_OU594967.1     -.-.-..-...A....A....A...C....G..A.....A.....U.....G.....A......A......U..A.......G...U.A...U.....A...G.....G....A...-.-..-auua...............................................ugga...A..U..G.A..C.C...aU....C...G...A...A....A.UU.A.A.G.GU.A...C.C.U..............................................................................G.AU.C.UUCCCGAAUC...GG.U.C.G.C..U..G..A.U..G...C..A..A..C..U..A..U..UG.C.A.AC.C.UGGAAUAAACAGGU...AG....................................................G.CGA...UUCA.G..U..U..G.AAA....G.A.G.ACGA..A.........................GUC.A.UUGUUGAGAUUGAAACAGAUAAAGU.U..G.UCC..U..U...GA........................................A.A.U.C...C.C...A..G...C...U...C...U.G......G.A...A...G.C..C..G
   NZ_OW370493.1     U.G.G..A...G....A....A...U....A..A.....A.....A.....U.....A......A......U..A.......U...-.G...A.....C...U.....A....U...U.G..A..........................................................-..-..-.-..A.A....U....U...A...C...A....G.UU.C.C.A.UC.C...C.U.U..............................................................................G.GA.G.AGUCAGUAUC...--.-.A.G.A..G..-..-.-..G...C..U..A..C..U..A..U..UG.C.C.AA.G.UGGCAUAAAAAACA...AG....................................................G.AGA...UGUG.G..U..U..A.AAG....U.G.G.AUGA..G.........................CUA.C.UUUUAGAGCUUGAAACAGAAAAAGU.U..A.CGU..U..G...GA........................................A.G.U.A...A.A...U..G...C...A...G...U.U......U.C...A...U.C..U..G
   NZ_OX336425.1     C.A.C..C...U....C....A...U....A..A.....A.....C.....-.....-......-......-..-.......-...U.A...U.....-...A.....A....A...U.C..A..........................................................A..U..G.G..C.A...aC....A...A...U...U....A.UU.A.C.A.AU.G...C.C.U..............................................................................C.GU.U.UGAGCGAUAC...UA.U.G.A.C..G..G..A.A..G...G..A..A..C..G..G..U..AG.C.G.AC.U.UGGCUUAAAAAAGU...AG....................................................G.CGA...UAAA.A..U..U..A.GCG....A.A.G.GAGA..U.........................AUC.U.UAGCUGAAAUUGAAACAGACAAAGC.A..A.CAA..U..G...GA........................................A.UuU.G...A.G...U..C...U...U...U...C.A......A.C...-...G.A..A..G


   Structure         (.(.(..(..............................................................................(.(...(........................................................................................)..)..).(..(.(...................................(.((.(......................................................................................).)).)..............)).)...(.(.....(..(.(..(...(..(........(..(..(..((.(...............................................................................).)))...))............(.(((..........................................))).)...........................(..(.(((..(................................................).).).)...).)...)..)...)...)...)...)........).).......).)..)..)


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sdhC-sdhD-sdhA-sdhB-sucA-sucB-sucC-sucD-sdhX



Position: 6557-6716, Conformation: #0







97% 90% 75% 50% Nucleotide present N N N Nucleotide identify E < 0.1 Base-pair covariation E < 0.05 Helix-level covariation 97% 90% 75%

R R R R Y R R R Y Y C C Y U G A R U C G U R C G A G A C R U G Y R U G G Y Y A A R R A R Y G G Y G A R G U R G A Y G A R Y Y U R U Y G A U G A A A C G A Y A A R G U R Y U G A R G U Y C Y C R G Y G 5'