sdhC-sdhD-sdhA-sdhB-sucA-sucB-sucC-sucD-sdhX



Position: 5542-5681, Conformation: #0







DMS reactivity > 1.0 0.0 0.4 0.7 G/U/No data
Position: 0 (position.label in template: 0.5')5' Position: 1 (position.label in template: 1.C) Reactivity: nanC Position: 2 (position.label in template: 2.U) Reactivity: nanU Position: 3 (position.label in template: 3.G) Reactivity: nanG Position: 4 (position.label in template: 4.G) Reactivity: nanG Position: 5 (position.label in template: 5.G) Reactivity: nanG Position: 6 (position.label in template: 6.G) Reactivity: nanG Position: 7 (position.label in template: 7.C) Reactivity: nanC Position: 8 (position.label in template: 8.G) Reactivity: nanG Position: 9 (position.label in template: 9.G) Reactivity: nanG Position: 10 (position.label in template: 10.U) Reactivity: nanU Position: 11 (position.label in template: 11.G) Reactivity: nanG Position: 12 (position.label in template: 12.C) Reactivity: nanC Position: 13 (position.label in template: 13.G) Reactivity: nanG Position: 14 (position.label in template: 14.G) Reactivity: nanG Position: 15 (position.label in template: 15.A) Reactivity: nanA Position: 16 (position.label in template: 16.A) Reactivity: nanA Position: 17 (position.label in template: 17.A) Reactivity: nanA Position: 18 (position.label in template: 18.A) Reactivity: nanA Position: 19 (position.label in template: 19.C) Reactivity: nanC Position: 20 (position.label in template: 20.C) Reactivity: nanC Position: 21 (position.label in template: 21.U) Reactivity: nanU Position: 22 (position.label in template: 22.C) Reactivity: nanC Position: 23 (position.label in template: 23.G) Reactivity: nanG Position: 24 (position.label in template: 24.C) Reactivity: nanC Position: 25 (position.label in template: 25.U) Reactivity: nanU Position: 26 (position.label in template: 26.U) Reactivity: nanU Position: 27 (position.label in template: 27.A) Reactivity: nanA Position: 28 (position.label in template: 28.C) Reactivity: nanC Position: 29 (position.label in template: 29.G) Reactivity: nanG Position: 30 (position.label in template: 30.C) Reactivity: nanC Position: 31 (position.label in template: 31.C) Reactivity: nanC Position: 32 (position.label in template: 32.A) Reactivity: nanA Position: 33 (position.label in template: 33.C) Reactivity: nanC Position: 34 (position.label in template: 34.G) Reactivity: nanG Position: 35 (position.label in template: 35.C) Reactivity: 1C Position: 36 (position.label in template: 36.U) Reactivity: nanU Position: 37 (position.label in template: 37.G) Reactivity: nanG Position: 38 (position.label in template: 38.G) Reactivity: nanG Position: 39 (position.label in template: 39.U) Reactivity: nanU Position: 40 (position.label in template: 40.U) Reactivity: nanU Position: 41 (position.label in template: 41.G) Reactivity: nanG Position: 42 (position.label in template: 42.A) Reactivity: 0A Position: 43 (position.label in template: 43.U) Reactivity: nanU Position: 44 (position.label in template: 44.G) Reactivity: nanG Position: 45 (position.label in template: 45.A) Reactivity: 0.5A Position: 46 (position.label in template: 46.A) Reactivity: 0A Position: 47 (position.label in template: 47.G) Reactivity: nanG Position: 48 (position.label in template: 48.G) Reactivity: nanG Position: 49 (position.label in template: 49.C) Reactivity: 0.5C Position: 50 (position.label in template: 50.A) Reactivity: 1A Position: 51 (position.label in template: 51.U) Reactivity: nanU Position: 52 (position.label in template: 52.U) Reactivity: nanU Position: 53 (position.label in template: 53.C) Reactivity: 0C Position: 54 (position.label in template: 54.C) Reactivity: 0C Position: 55 (position.label in template: 55.G) Reactivity: nanG Position: 56 (position.label in template: 56.G) Reactivity: nanG Position: 57 (position.label in template: 57.U) Reactivity: nanU Position: 58 (position.label in template: 58.U) Reactivity: nanU Position: 59 (position.label in template: 59.C) Reactivity: 0.5C Position: 60 (position.label in template: 60.G) Reactivity: nanG Position: 61 (position.label in template: 61.C) Reactivity: 0C Position: 62 (position.label in template: 62.C) Reactivity: 0C Position: 63 (position.label in template: 63.U) Reactivity: nanU Position: 64 (position.label in template: 64.G) Reactivity: nanG Position: 65 (position.label in template: 65.U) Reactivity: nanU Position: 66 (position.label in template: 66.C) Reactivity: 1C Position: 67 (position.label in template: 67.G) Reactivity: nanG Position: 68 (position.label in template: 68.G) Reactivity: nanG Position: 69 (position.label in template: 69.G) Reactivity: nanG Position: 70 (position.label in template: 70.U) Reactivity: nanU Position: 71 (position.label in template: 71.G) Reactivity: nanG Position: 72 (position.label in template: 72.A) Reactivity: 1A Position: 73 (position.label in template: 73.A) Reactivity: 1A Position: 74 (position.label in template: 74.G) Reactivity: nanG Position: 75 (position.label in template: 75.A) Reactivity: 1A Position: 76 (position.label in template: 76.C) Reactivity: 0.5C Position: 77 (position.label in template: 77.U) Reactivity: nanU Position: 78 (position.label in template: 78.C) Reactivity: 0C Position: 79 (position.label in template: 79.C) Reactivity: 0C Position: 80 (position.label in template: 80.G) Reactivity: nanG Position: 81 (position.label in template: 81.G) Reactivity: nanG Position: 82 (position.label in template: 82.U) Reactivity: nanU Position: 83 (position.label in template: 83.C) Reactivity: 1C Position: 84 (position.label in template: 84.G) Reactivity: nanG Position: 85 (position.label in template: 85.C) Reactivity: 0C Position: 86 (position.label in template: 86.G) Reactivity: nanG Position: 87 (position.label in template: 87.G) Reactivity: nanG Position: 88 (position.label in template: 88.U) Reactivity: nanU Position: 89 (position.label in template: 89.A) Reactivity: 0.5A Position: 90 (position.label in template: 90.C) Reactivity: 0.5C Position: 91 (position.label in template: 91.C) Reactivity: 0C Position: 92 (position.label in template: 92.U) Reactivity: nanU Position: 93 (position.label in template: 93.U) Reactivity: nanU Position: 94 (position.label in template: 94.C) Reactivity: 0C Position: 95 (position.label in template: 95.U) Reactivity: nanU Position: 96 (position.label in template: 96.U) Reactivity: nanU Position: 97 (position.label in template: 97.C) Reactivity: 0C Position: 98 (position.label in template: 98.C) Reactivity: 0.5C Position: 99 (position.label in template: 99.A) Reactivity: 0A Position: 100 (position.label in template: 100.C) Reactivity: 0C Position: 101 (position.label in template: 101.C) Reactivity: 0C Position: 102 (position.label in template: 102.G) Reactivity: nanG Position: 103 (position.label in template: 103.C) Reactivity: 0C Position: 104 (position.label in template: 104.C) Reactivity: 1C Position: 105 (position.label in template: 105.A) Reactivity: 0.5A Position: 106 (position.label in template: 106.C) Reactivity: 0.5C Position: 107 (position.label in template: 107.G) Reactivity: nanG Position: 108 (position.label in template: 108.C) Reactivity: 0C Position: 109 (position.label in template: 109.G) Reactivity: nanG Position: 110 (position.label in template: 110.G) Reactivity: nanG Position: 111 (position.label in template: 111.U) Reactivity: nanU Position: 112 (position.label in template: 112.G) Reactivity: nanG Position: 113 (position.label in template: 113.A) Reactivity: 1A Position: 114 (position.label in template: 114.U) Reactivity: nanU Position: 115 (position.label in template: 115.C) Reactivity: 0C Position: 116 (position.label in template: 116.C) Reactivity: 0C Position: 117 (position.label in template: 117.A) Reactivity: 1A Position: 118 (position.label in template: 118.C) Reactivity: 1C Position: 119 (position.label in template: 119.A) Reactivity: 1A Position: 120 (position.label in template: 120.A) Reactivity: 1A Position: 121 (position.label in template: 121.C) Reactivity: 0C Position: 122 (position.label in template: 122.C) Reactivity: 0C Position: 123 (position.label in template: 123.A) Reactivity: 1A Position: 124 (position.label in template: 124.G) Reactivity: nanG Position: 125 (position.label in template: 125.U) Reactivity: nanU Position: 126 (position.label in template: 126.C) Reactivity: 0C Position: 127 (position.label in template: 127.U) Reactivity: nanU Position: 128 (position.label in template: 128.A) Reactivity: 1A Position: 129 (position.label in template: 129.A) Reactivity: 1A Position: 130 (position.label in template: 130.C) Reactivity: 0C Position: 131 (position.label in template: 131.G) Reactivity: nanG Position: 132 (position.label in template: 132.G) Reactivity: nanG Position: 133 (position.label in template: 133.U) Reactivity: nanU Position: 134 (position.label in template: 134.U) Reactivity: nanU Position: 135 (position.label in template: 135.C) Reactivity: 0.5C Position: 136 (position.label in template: 136.C) Reactivity: 0.5C Position: 137 (position.label in template: 137.A) Reactivity: 0.5A Position: 138 (position.label in template: 138.C) Reactivity: 1C Position: 139 (position.label in template: 139.U) Reactivity: nanU Position: 140 (position.label in template: 140.U) Reactivity: nanU Position: 141 (position.label in template: 141.A) Reactivity: 0.5A Position: 142 (position.label in template: 142.C) Reactivity: 0C Position: 143 (position.label in template: 143.A) Reactivity: 1A Position: 144 (position.label in template: 144.C) Reactivity: 0.5C Position: 145 (position.label in template: 145.G) Reactivity: nanG Position: 146 (position.label in template: 146.C) Reactivity: 0C Position: 147 (position.label in template: 147.C) Reactivity: nanC Position: 148 (position.label in template: 148.G) Reactivity: nanG Position: 149 (position.label in template: 149.C) Reactivity: nanC Position: 150 (position.label in template: 150.U) Reactivity: nanU Position: 151 (position.label in template: 151.G) Reactivity: nanG Position: 152 (position.label in template: 152.C) Reactivity: nanC Position: 153 (position.label in template: 153.A) Reactivity: nanA Position: 154 (position.label in template: 154.A) Reactivity: nanA Position: 155 (position.label in template: 155.C) Reactivity: nanC Position: 156 (position.label in template: 156.A) Reactivity: nanA Position: 157 (position.label in template: 157.U) Reactivity: nanU Position: 158 (position.label in template: 158.A) Reactivity: nanA Position: 159 (position.label in template: 159.U) Reactivity: nanU Position: 160 (position.label in template: 160.C) Reactivity: nanC Position: 161 (position.label in template: 161.C) Reactivity: nanC Position: 162 (position.label in template: 162.A) Reactivity: nanA Position: 163 (position.label in template: 163.U) Reactivity: nanU Position: 164 (position.label in template: 164.A) Reactivity: nanA Position: 165 (position.label in template: 165.A) Reactivity: nanA Position: 166 (position.label in template: 166.C) Reactivity: nanC Position: 167 (position.label in template: 167.G) Reactivity: nanG Position: 168 (position.label in template: 168.G) Reactivity: nanG Position: 169 (position.label in template: 169.G) Reactivity: nanG Position: 170 (position.label in template: 170.C) Reactivity: nanC Position: 171 (position.label in template: 171.A) Reactivity: nanA Position: 172 (position.label in template: 172.G) Reactivity: nanG Position: 173 (position.label in template: 173.G) Reactivity: nanG Position: 174 (position.label in template: 174.G) Reactivity: nanG Position: 175 (position.label in template: 175.C) Reactivity: nanC Position: 176 (position.label in template: 176.G) Reactivity: nanG Position: 177 (position.label in template: 177.C) Reactivity: nanC Position: 178 (position.label in template: 178.G) Reactivity: nanG Position: 179 (position.label in template: 179.U) Reactivity: nanU Position: 180 (position.label in template: 180.U) Reactivity: nanU Position: 181 (position.label in template: 181.3')3' 10 20 30 50 100 150


sdhC-sdhD-sdhA-sdhB-sucA-sucB-sucC-sucD-sdhX



Position: 5542-5681, Conformation: #0







Retained alignments:


   NC_002939.5       UG...G.G..G..C...A..A...U..G..C..C..G..AG...A...C...C..C...U..G...G...C.CUA...CGGGA..C...GC................................................UU..-C.......U..G..G......C...C.G...A..G.G...G.Aa....cC.U..C.C.-..A..U.C..C.G.C..C.U...G..U.C.................................CG..G..GG..A..GGAUUCCC.GGCG.............CGGCACCUUCGGC.CACCGCCAU........................................GCA...GUGCUCCA.CGACAU...-------gaacaccga.......................................agcauuccac...-.G...U.G.CC.-CCUGG.A...C.G..G..CGC..U..G.....CU...A.....C..-...-....--.......-...-....-.-.-.--C...G..G..C....G..G..U....................G.C.G....G.UC.-
   NC_002977.6       UG...G.G..G..C...U..U...C..G..G..C..G..AA...A...C...C..C...U..C...G...C.UUA...CGCCU..C...CC................................................UG..CU.......G..U..G......G...G.A...A..G.G...C.C......G.C..A.A.C..G..U.C..C.G.A..C.U...G..A.C.................................GG..G..CC..A..GGACGUCG.GACG.............CGGCACUUUUUUC.CACCGCCAU........................................GCC...AUCGUCCA.UGACCA...GCGGACU.............................................................G.G...A.G.AG.GUUUGC.G...C.C..C..CGC..U..C.....CA...G.....C..A...C....CU.......-...C....A.G.G.GCG...G..G..C...cA..G..G....................G.C.A....G.GU.U
   NC_003910.7       UG...G.G..G..U...A..U...G..G..C..U..G..AA...A...A...C..U...U..A...G...C.UUA...UGCAU..C...CA................................................UU..GU.......U..G..A......U...C.G...U..G.G...U.G......A.U..C.G.U..G..U.A..C.G.U..A.U...C..A.C.................................AG..G..UC..A..AGAUUCUG.GUCG.............UGGUACUUUCUUC.CAUCGCCAU........................................GCU...GUAUUGCA.UAAUCA...AGAAGAC.............................................................G.G...U.A.GU.ACCUAU.U...U.A..C..CAC..U..G.....CA...A.....A..A...U....AU.......C...A....G.A.G.AAG...G..C..C....A..A..G....................G.C.C....C.AU.U
   NC_004347.2       UG...G.G..G..C...U..U...U..G..C..U..G..AA...A...C...C..U...U..A...G...C.UUA...CGCAA..C...GA................................................UU..CU.......U..G..A......A...GaU...A..A.G...C.A......-.A..C.G.U..G..U.U..C.G.C..A.U...U..A.C.................................UG..G..UC..A..AGACUCUG.GCCG.............CGGGACUUUCUUC.CACCGUCAU........................................GCG...GUUCUGCA.UAACCA...AAACGAU.............................................................G.C...G.A.CU.ACGUAU.U...U.A..C..CAC..U..G.....CG...U.....A..A...U....AU.......U...A....G.C.G.AUG...G..U..C....A..A..G....................G.U.C....C.AA.U
   NC_004556.1       UG...G.G..G..C...U..U...U..G..C..C..G..AA...A...A...U..C...U..G...G...C.CUA...UGCCA..C...GU................................................U-..GC.......U..G..G......C...UgA...A..G.G...C.C......A.C..A.A.G..C..U.A..C.G.C..U.U...G..G.U.................................CG..G..CC..A..AGACGCCG.GACG.............CGGCACCUUUUUC.CACCGCCAC........................................GCC...AUCCUGCA.CGAUCA...AAAAACC.............................................................G.A...C.A.GC.UAUUAU.C...U.G..C..CGC..U..G.....CA...C.....C..A...A....CU.......G...G....U.C.A.GC-...-..-..-....-..-..-aacc........cggac...-.-.G....A.--.-
   NC_004578.1       UG...G.G..G..C...U..A...C..G..C..C..G..AA...A...C...C..A...U..G...G...C.AUA...CGCCA..C...GC................................................UG..GC.......G..U..U......C...G.A...A..G.G...C.C......A.C..C.C.G..A..U.C..C.G.C..A.U...G..A.C.................................AG..G..CC..A..GGACAUCG.GUCG.............CGGUACGUUCUCG.CACCGUCAC........................................GCU...GUGCUGCA.CAACCA...GAAAGAC.............................................................G.C...C.G.GG.ACUUAC.A...U.U..C..CGC..U..A.....CA...G.....A..A...U....CU.......G...U....A.C.G.CCG...-..G..U....C..A..G....................C.C.G....C.GU.U
   NC_004603.1       AC...U.G..G..-...G..G...U..A..U..G..G..CUg.aA...A...C..A...U..U...G..gC.UUA...CGCGA..C...AU................................................UG..GU.......A..G..A......C...G.A...U..G.G...U.A......A.G..C.G.U..A..U.C..C.G.U..A.U...U..U.C.................................UG..G..UC..A..GGACUCAG.GUCG.............UGGUACUUUCUUC.CAUCGUCAC........................................UCA...GUUCUUCA.CAACCA...AUCAGAU.............................................................G.C...A.A.GC.ACUUAC.A...U.C..C..CGC..U..A.....GC...G.....A..A...U....AU.......C...C....A.U.G.ACA...A..G..C....A..G..G...................gG.C.C....U.UU.C
   NC_005126.1       UG...G.G..G..U...G..C...C..G..C..G..G..AA...A...C...A..U...U..G...A...C.CUA...UGCAA..C...UU................................................UA..GU.......G..G..A......U...G.A...A..G.G...G.G......U.U..C.C.G..G..U.A..C.G.U..U.U...G..U.C.................................UG..G..UG..A..AGAUGCCG.GUCG.............UGGUACUUUCUUC.CAUCGUCAU........................................GCG...GUUAUCCA.UAAUCA...GGCUAAC.............................................................G.G...U.U.CU.GUUUAU.G...U.U..C..CUC..U..G....gCG...A.....-..A...C....GU.......U...C....A.U.A.ACG...G..U..C....A..G..G....................G.A.G....C.AU.U
   NC_005966.1       UG...G.G..G..U...G..C...U..G..C..U..G..AG...A...C...G..C...U..G...G...C.CUA...CGCGA..C...AC................................................UU..AU.......U..G..A......U...G.A...A..G.G...U.U......A.U..U.U.G..G..U.U..C.G.U..A.U...U..A.C.................................GG..G..UG..A..AGAUGUAG.GUCG.............UGGUACGUUCUCA.CAUCGUCAU........................................GCC...AAGUUACA.CAAUCA...AGUAGAU.............................................................G.G...U.U.CG.ACCUAU.A...U.U..C..CAC..U..G.....UG...U.....C..A...U....GU.......G...A....A.G.G.AAA...A..C..C....-..-..-....................-.-.-....-.--.-
   NC_006512.1       UG...G.G..G..U...U..U...C..G..C..U..G..AA...A...C...U..U...U..G...G...C.UUA...UGCCA..C...CU................................................UA..GU.......U..A..A......C...G.A...C..G.G...U.A......C.U..C.A.U..A..U.U..C.G.U..U.U...G..A.C.................................CG..G..UC..A..GGACAGCG.GCCG.............UGGUACCUUCUUC.CACCGCCAC........................................GCG...GUAUUGCA.UAACCA...AAAAGAU.............................................................G.G...U.U.CU.ACCUAU.A...U.G..C..CAC..U..Ga...aCA...A.....C..U...U....AG.......G...U....U.C.A.G--...A..G..C....A..G..G...................gG.C.A....A.AU.-
   NC_006513.1       -U...G.G..G..G...G..A...U..G..G..G..C..GA..gA...A...C..C...U..C...G...C.CUA...CGC-G..A...GC................................................CU..GC.......U..C..G......C...GcA...A..G.G...G.U......U.C..G.G.C..G..U.G..C.G.C..A.U...C..U.C.................................CG..G..CG..A..GGACGUCG.GCCG.............CGGCACGUUCUUC.CACCGCCAC........................................GCA...GUGCUGCA.CGACCA...G------aagcgcgagc.....................................gcugggaccag...G.G...-.-.-C.ACCUAC.G...U.G..C..CGC..U..G.....AA...G.....C..A...U....AU.......C...C....A.G.G.ACG...G..C..C....A..G..G....................C.C.G....C.GC.U
   NC_007292.1       UG...G.G..G..A...G..C...G..G..C..A..G..AA...A...U...G..C...U..A...G...C.GUA...CGCUA..C...UU................................................UA..UU.......A..G..A......U...C.A...A..G.G...A.A......U.U..U.C.U..A..U.U..C.G.U..U.U...A..U.C.................................UG..G..AG..A..AGACGCUG.CUCG.............AGGAACUUUUUUU.CAUAGACAU........................................GCU...GUAAUACA.UGAUCA...AAAUAAU.............................................................G.G...U.A.CG.AAAUAU.A...U.C..C..CUU..U..Aa..ugCA...C.....C..U...U....AU.......U...A....A.U.A.C--...-..-..-....-..-..-....................-.-.-....-.--.-
   NC_007481.1       UG...G.G..G..C...A..U...G..G..C..A..-..-G...A...A...A..C...A..C...U...C.GCUu.aUGCAA..C...UA................................................UU..GC.......A..G..C......A...G.A...A..G.G...C.A......C.A..-.-.G..A..U.A..U.U.C..G.U...U..U.U.................................ACugG..AC..A..AGAUUCUG.GUCG.............UGGUACUUUCUUC.CAUCGCCAU........................................GCG...GUAGUACA.UAGUCA...AGCCGAU.............................................................G.G...U.G.CG.ACUUAC.A...C.U..C..CAC..U..U.....GA...G.....C..A...U....GU.......U...G....G.U.A.AAG...A..U..C....A..A..G....................G.U.A....C.UU.U
   NC_007510.1       UG...G.G..G..C...A.uG...G..G..C..G..A..AC...A...-...C..C...U..C...G...C.GUU...CGCGU..C...GC................................................UC..GU.......C..G..C......A...U.C...G..G.G...C.U......A.C..U.C.G..G..U.G..C.G.C..C.U...G..A.C.................................CG..G..CC..A..GGACUCGG.GCCG.............CGGCACGUUCACG.CACCGUCAC........................................GCG...GUGCUGCA.CGACCA...GA-----accgcgagcg......................................cuggaacgac...G.G...-.-.-C.ACGUAC.G...U.G..C..CGC..U..G.....CA...G.....A..A...C....AU.......C...G....C.A.G.AA-...G..G..C....C..A..G....................G.C.G...aA.GU.U
   NC_007712.1       UG...G.G..G..C...G..G...C..G..C..C..G..AG...A...C...G..C...U..G...G...C.UUA...CGCCA..C...GC................................................UG..GU.......G..G..A......U...G.A...G..G.G...G.A......U.C..C.C.C..A..U.C..C.G.C..C.U...G..U.C.................................GG..G..AG..A..GGACACCG.CCCG.............CGGCACGUUCUUC.CAUCGCCAC........................................GCG...GUGGUGCA.UAACCA...GAAGAAU.............................................................G.G...C.U.CC.AGCUAC.A...C.U..C..CGU..U..Gg...cC-...-.....A..A...U....GU.......C...C....A.C.A.ACG...G..U..C....A..G..G....................G.C.A....G.CU.U
   NC_007908.1       UG...G.G..G..C...A.uG...G..G..C..G..A..GC...-...A...C..A...U..G...G...C.CUU...UGCCU..C...GC................................................UG..GU.......-..G..G......C...C.A...G..C.G..gC.U......A.C..C.C.G..G..U.G..C.G.C..C.U...G..A.G.................................CG..G..CG..A..AGACUGCG.GUCG.............CGGCACCUUUACC.CACCGGCAU........................................UCG...GUGAUUCA.CGACCA...A------aaccgugaaa.....................................agugggaugug...G.G...-.-.-C.ACCUAU.A...U.C..C..CGC..U..G.....CA...A.....A..A...C....GU.......G...A....C.C.G.ACA...A..C..C....A..G..G....................C.U.C....C.GU.U
   NC_007951.1       UG...G.G..G..CaugG..G...C..G..-..-..-..AA...C...A...C..C...U..G...G...C.AUU...CGCGU..C...GC................................................UG..GU.......C..G..C......C...U.C...G..G.G...C.U......A.U..G.C.A..G..U.U..C.G.C..C.U...G..A.C.................................CG..G..CC..A..GGACUCGG.GCCG.............CGGCACGUUCACG.CACCGUCAC........................................GCG...GUGCUGCA.CGAUCA...GA-----accgcgaa.........................................cgcuggaac...G.A...C.G.GC.ACGUAC.G...U.G..C..CGC..U..G.....CA...A.....A..A...-....--.......-...C....A.U.C.GCC...-..G..A....A..G..G....................U.C.A....G.GC.G
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   NZ_LT906479.1     UG...G.G..G..C...G..C...G..G..C..C..G..AA...A...C...G..C...U..G...G...C.UUA...CGCCA..C...CA................................................UG..GU.......G..G..A......U...G.A...A..G.G...C.A......U.C..C.C.G..A..U.C..C.G.C..C.U...C..U.C.................................CG..G..CG..A..AGAUGCCG.GCCG.............CGGCACCUUCUUC.CACCGCCAU........................................GCG...GUGGUGCA.CAACCA...GAAAAAC.............................................................G.G...U.U.CG.GUCUAC.G...U.G..C..CGC..U..G.....GC...G.....A..A...U....GU.......G...C....A.C.A.GCG...G..C..C....A..G..G....................G.C.G....A.AU.U
   NZ_LT906482.1     UG...G.G..G..U...A..U...-..G..G..C..C..GA...A...A...C..C...A.uC...G...C.CUA...CGCCA..G...CC................................................UG..CU.......C..G..A......A...G.C...C..G.G...C.C......A.C..G.A.C..A..U.C..C.G.C..A.U...U..U.C.................................CG..G..CG..A..AGACUCCG.GCCG.............CGGCACCUUCUCA.CACCGCCAC........................................GCC...GUGCUGCA.CGACCA...A------aaccgugcc........................................gaacgcacc...G.G...C.G.GC.GUGUAU.A...U.C..C..CGC..U..G.....CA...A.....C..A...C....AU.......C...A....G.C.G.AAA...A..A..C....A..A..G....................G.CcG....C.UU.C
   NZ_LT907988.1     UG...G.G..G..C...-..-...-..A..U..G..G..GU...GaacA...C..C...U..G...G...C.CUU...CGCCA..C...GC................................................UG..GU.......U..G..C......C...U.C...G..G.G...C.U......A.C..C.C.G..A..U.C..C.G.C..A.U...C..A.C.................................CG..G..CC..A..GGAUUCGG.GCCG.............CGGCACGUUCACG.CACCGCCAC........................................GCC...GUGCUGCA.CGACCA...GA-----accgcgaacg......................................cuggaacgac...G.G...-.-.-C.ACCUAC.A...U.U..C..CGC..U..G.....CA...G.....A..A...C....GU.......C...U....C.C.G.ACG...C..G..C....A..G..-....................G.C.G....C.CU.U
   NZ_OU015430.1     UG...G.G..G..C...U..U...C..G..C..C..G..AG...A...A...C..C...U..G...G...C.GUA...CGCCA..C...GC................................................UG..CU.......C..A..G......C...G.A...A..G.G...C.U......A.C..A.A.G..U..U.G..C.G.C..C.U...G..G.U.................................GG..G..CC..A..GGACAGCG.GCCG.............CGGCACCUUCUUC.CACCGCCAC........................................GCG...AUCCUGCA.CGACCA...GGCAACC.............................................................G.A...C.G.AU.UACCAC.C...U.G..C..CGC..U..G.....CG...C.....C..AgcuG....GU.......C...A....A.G.A.AC-...-..-..-....-..-..-....................-.-.-....-.--.-
   NZ_OU594967.1     UU...G.G..G..-...G..G...U..U..U..G..C..AGa.aA...A...U..C...U..A...G...C.UUA...UGCCA..C...AU................................................UA..CU.......C..G..A......U...A.U...G..G.G...C.G......C.C..G.G.A..A..U.A..C.G.C..U.U...G..A.C.................................UG..G..GC..A..GGAUUCUG.GUCG.............UGGCACGUUUUUC.CAUCGUCAU........................................GCG...GUAUUACA.UAGUCA...AGAUGAU.............................................................G.G...U.U.CU.GUCUAU.A...U.G..C..CGC..U..U.....AA...G.....C..A...U....AU.......U...A....G.U.G.AUA...A..G..C....A..A..G....................G.U.A....U.GU.U
   NZ_OU907312.1     UG...G.G..G..G...G..G...G..G..C..C..G..AA...A...C...C..C...U..G...G...C.UUA...UGCCA..C...CC................................................UG..-U.......U..G..G......C..gC.A...A..G.G...U.A......U.U..G.A.U..G..U.G..C.G.A..C.U...A..U.C.................................UG..G..UC..A..GGAUAGUG.GCCG.............UGGUACCUUUUUC.CAUCGCCAU........................................GUG...GUGCUACA.UCAUCA...ACAAGAA.............................................................G.A...U.C.GC.UGUUAU.A...U.A..C..CGC..U..Ug..ccCA...C.....C.uA...C....AG.......C...C....A.C.A.ACA...G..G..G....-..-..-....................C.C.G....C.UU.U
   NZ_OU912926.1     UG...G.G..G..C...A..U...G..G..C..G..G..AA...A...A...C..A...U..G...G...C.AUA...UGCCA..G...CU................................................UG..GU.......A..G..C......U...G.A...G..G.G...U.A......U.U..C.C.G..G..U.U..C.G.U..U.U...A..U.C.................................UG..G..GG..A..GGACAGCG.CGCG.............CGGUACCUUUUUC.CAUCGUCAU........................................GCC...GUGCUGCA.CGACCA...A------aaucgagugc.....................................agugggacaag...G.G..cU.A.UC.ACAUUC.C...C.-..-..--U..U..G.....CA...A.....A..A...U....AU.......U...G....C.G.C.CGG...A..U..C....A..G..G....................-.-.C....C.--.-


   Structure         ((.....(..(..(...(..(...(..(..(..(..(..((...........(..(...(..(...(.....(((....((((........................................................))..)).......)..)..)......)...).....)..).)............).)..).).)..........(.(.(..(.(..........................................))..)..))..........(((..................)))...........((((((...........................................)))...))).........((........................................................................).).....................).)..)..)))..)........))...........................................(.(((......(..(...............................).)......).)).)


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sdhC-sdhD-sdhA-sdhB-sucA-sucB-sucC-sucD-sdhX



Position: 5542-5681, Conformation: #0







97% 90% 75% 50% Nucleotide present N N N Nucleotide identify E < 0.1 Base-pair covariation E < 0.05 Helix-level covariation 97% 90% 75%

U G G G G Y G G R R R Y Y U G C U Y G C C Y U Y R Y R R G G Y Y R U C G Y U C G G Y A R G A Y Y G G C G Y G G Y A C U U C Y C A Y C G Y C A Y G C G U U C A Y R A Y C A R R R G R R U A Y R Y C C R C U R R A Y U R R R R C R 5'