ptsH-ptsI-crr



Position: 1787-1941, Conformation: #1







DMS reactivity > 1.0 0.0 0.4 0.7 G/U/No data
Position: 0 (position.label in template: 0.5')5' Position: 1 (position.label in template: 1.G) Reactivity: nanG Position: 2 (position.label in template: 2.C) Reactivity: nanC Position: 3 (position.label in template: 3.A) Reactivity: nanA Position: 4 (position.label in template: 4.C) Reactivity: nanC Position: 5 (position.label in template: 5.U) Reactivity: nanU Position: 6 (position.label in template: 6.G) Reactivity: nanG Position: 7 (position.label in template: 7.C) Reactivity: nanC Position: 8 (position.label in template: 8.G) Reactivity: nanG Position: 9 (position.label in template: 9.C) Reactivity: nanC Position: 10 (position.label in template: 10.A) Reactivity: nanA Position: 11 (position.label in template: 11.A) Reactivity: nanA Position: 12 (position.label in template: 12.A) Reactivity: nanA Position: 13 (position.label in template: 13.G) Reactivity: nanG Position: 14 (position.label in template: 14.A) Reactivity: nanA Position: 15 (position.label in template: 15.G) Reactivity: nanG Position: 16 (position.label in template: 16.A) Reactivity: nanA Position: 17 (position.label in template: 17.U) Reactivity: nanU Position: 18 (position.label in template: 18.C) Reactivity: nanC Position: 19 (position.label in template: 19.G) Reactivity: nanG Position: 20 (position.label in template: 20.A) Reactivity: nanA Position: 21 (position.label in template: 21.A) Reactivity: nanA Position: 22 (position.label in template: 22.A) Reactivity: nanA Position: 23 (position.label in template: 23.U) Reactivity: nanU Position: 24 (position.label in template: 24.C) Reactivity: nanC Position: 25 (position.label in template: 25.U) Reactivity: nanU Position: 26 (position.label in template: 26.A) Reactivity: nanA Position: 27 (position.label in template: 27.C) Reactivity: nanC Position: 28 (position.label in template: 28.A) Reactivity: nanA Position: 29 (position.label in template: 29.A) Reactivity: nanA Position: 30 (position.label in template: 30.A) Reactivity: nanA Position: 31 (position.label in template: 31.C) Reactivity: nanC Position: 32 (position.label in template: 32.A) Reactivity: nanA Position: 33 (position.label in template: 33.G) Reactivity: nanG Position: 34 (position.label in template: 34.G) Reactivity: nanG Position: 35 (position.label in template: 35.A) Reactivity: nanA Position: 36 (position.label in template: 36.A) Reactivity: nanA Position: 37 (position.label in template: 37.C) Reactivity: 0C Position: 38 (position.label in template: 38.U) Reactivity: nanU Position: 39 (position.label in template: 39.G) Reactivity: nanG Position: 40 (position.label in template: 40.C) Reactivity: 0C Position: 41 (position.label in template: 41.G) Reactivity: nanG Position: 42 (position.label in template: 42.C) Reactivity: 0C Position: 43 (position.label in template: 43.G) Reactivity: nanG Position: 44 (position.label in template: 44.A) Reactivity: 0A Position: 45 (position.label in template: 45.C) Reactivity: 0.5C Position: 46 (position.label in template: 46.G) Reactivity: nanG Position: 47 (position.label in template: 47.A) Reactivity: 0.5A Position: 48 (position.label in template: 48.A) Reactivity: 0.5A Position: 49 (position.label in template: 49.G) Reactivity: nanG Position: 50 (position.label in template: 50.G) Reactivity: nanG Position: 51 (position.label in template: 51.U) Reactivity: nanU Position: 52 (position.label in template: 52.A) Reactivity: 0.5A Position: 53 (position.label in template: 53.A) Reactivity: 1A Position: 54 (position.label in template: 54.A) Reactivity: 0.5A Position: 55 (position.label in template: 55.G) Reactivity: nanG Position: 56 (position.label in template: 56.C) Reactivity: 0C Position: 57 (position.label in template: 57.G) Reactivity: nanG Position: 58 (position.label in template: 58.U) Reactivity: nanU Position: 59 (position.label in template: 59.U) Reactivity: nanU Position: 60 (position.label in template: 60.U) Reactivity: nanU Position: 61 (position.label in template: 61.G) Reactivity: nanG Position: 62 (position.label in template: 62.A) Reactivity: 0A Position: 63 (position.label in template: 63.C) Reactivity: 0C Position: 64 (position.label in template: 64.G) Reactivity: nanG Position: 65 (position.label in template: 65.A) Reactivity: 1A Position: 66 (position.label in template: 66.G) Reactivity: nanG Position: 67 (position.label in template: 67.U) Reactivity: nanU Position: 68 (position.label in template: 68.C) Reactivity: 0C Position: 69 (position.label in template: 69.A) Reactivity: 0A Position: 70 (position.label in template: 70.A) Reactivity: 0A Position: 71 (position.label in template: 71.U) Reactivity: nanU Position: 72 (position.label in template: 72.U) Reactivity: nanU Position: 73 (position.label in template: 73.G) Reactivity: nanG Position: 74 (position.label in template: 74.A) Reactivity: 0A Position: 75 (position.label in template: 75.A) Reactivity: 1A Position: 76 (position.label in template: 76.A) Reactivity: 1A Position: 77 (position.label in template: 77.U) Reactivity: nanU Position: 78 (position.label in template: 78.C) Reactivity: 0C Position: 79 (position.label in template: 79.G) Reactivity: nanG Position: 80 (position.label in template: 80.G) Reactivity: nanG Position: 81 (position.label in template: 81.C) Reactivity: 0C Position: 82 (position.label in template: 82.G) Reactivity: nanG Position: 83 (position.label in template: 83.U) Reactivity: nanU Position: 84 (position.label in template: 84.A) Reactivity: 1A Position: 85 (position.label in template: 85.A) Reactivity: 0.5A Position: 86 (position.label in template: 86.U) Reactivity: nanU Position: 87 (position.label in template: 87.G) Reactivity: nanG Position: 88 (position.label in template: 88.G) Reactivity: nanG Position: 89 (position.label in template: 89.U) Reactivity: nanU Position: 90 (position.label in template: 90.G) Reactivity: nanG Position: 91 (position.label in template: 91.G) Reactivity: nanG Position: 92 (position.label in template: 92.A) Reactivity: 0A Position: 93 (position.label in template: 93.A) Reactivity: 0.5A Position: 94 (position.label in template: 94.A) Reactivity: 1A Position: 95 (position.label in template: 95.C) Reactivity: 0C Position: 96 (position.label in template: 96.A) Reactivity: 0A Position: 97 (position.label in template: 97.C) Reactivity: 0C Position: 98 (position.label in template: 98.C) Reactivity: 0C Position: 99 (position.label in template: 99.G) Reactivity: nanG Position: 100 (position.label in template: 100.G) Reactivity: nanG Position: 101 (position.label in template: 101.C) Reactivity: 1C Position: 102 (position.label in template: 102.U) Reactivity: nanU Position: 103 (position.label in template: 103.G) Reactivity: nanG Position: 104 (position.label in template: 104.C) Reactivity: 0C Position: 105 (position.label in template: 105.C) Reactivity: 0C Position: 106 (position.label in template: 106.G) Reactivity: nanG Position: 107 (position.label in template: 107.C) Reactivity: 1C Position: 108 (position.label in template: 108.A) Reactivity: 1A Position: 109 (position.label in template: 109.A) Reactivity: 1A Position: 110 (position.label in template: 110.C) Reactivity: 0C Position: 111 (position.label in template: 111.A) Reactivity: 0A Position: 112 (position.label in template: 112.A) Reactivity: 0A Position: 113 (position.label in template: 113.U) Reactivity: nanU Position: 114 (position.label in template: 114.U) Reactivity: nanU Position: 115 (position.label in template: 115.G) Reactivity: nanG Position: 116 (position.label in template: 116.C) Reactivity: 0C Position: 117 (position.label in template: 117.A) Reactivity: 1A Position: 118 (position.label in template: 118.C) Reactivity: 0C Position: 119 (position.label in template: 119.G) Reactivity: nanG Position: 120 (position.label in template: 120.U) Reactivity: nanU Position: 121 (position.label in template: 121.C) Reactivity: 0C Position: 122 (position.label in template: 122.A) Reactivity: 0.5A Position: 123 (position.label in template: 123.U) Reactivity: nanU Position: 124 (position.label in template: 124.U) Reactivity: nanU Position: 125 (position.label in template: 125.U) Reactivity: nanU Position: 126 (position.label in template: 126.A) Reactivity: 1A Position: 127 (position.label in template: 127.G) Reactivity: nanG Position: 128 (position.label in template: 128.C) Reactivity: 0C Position: 129 (position.label in template: 129.C) Reactivity: 0.5C Position: 130 (position.label in template: 130.A) Reactivity: 0.5A Position: 131 (position.label in template: 131.A) Reactivity: 0.5A Position: 132 (position.label in template: 132.A) Reactivity: 0.5A Position: 133 (position.label in template: 133.G) Reactivity: nanG Position: 134 (position.label in template: 134.A) Reactivity: 0.5A Position: 135 (position.label in template: 135.A) Reactivity: 0.5A Position: 136 (position.label in template: 136.G) Reactivity: nanG Position: 137 (position.label in template: 137.U) Reactivity: nanU Position: 138 (position.label in template: 138.U) Reactivity: nanU Position: 139 (position.label in template: 139.G) Reactivity: nanG Position: 140 (position.label in template: 140.A) Reactivity: 0.5A Position: 141 (position.label in template: 141.U) Reactivity: nanU Position: 142 (position.label in template: 142.U) Reactivity: nanU Position: 143 (position.label in template: 143.U) Reactivity: nanU Position: 144 (position.label in template: 144.C) Reactivity: 0.5C Position: 145 (position.label in template: 145.U) Reactivity: nanU Position: 146 (position.label in template: 146.U) Reactivity: nanU Position: 147 (position.label in template: 147.U) Reactivity: nanU Position: 148 (position.label in template: 148.A) Reactivity: 0.5A Position: 149 (position.label in template: 149.G) Reactivity: nanG Position: 150 (position.label in template: 150.U) Reactivity: nanU Position: 151 (position.label in template: 151.A) Reactivity: 0.5A Position: 152 (position.label in template: 152.U) Reactivity: nanU Position: 153 (position.label in template: 153.C) Reactivity: 0.5C Position: 154 (position.label in template: 154.G) Reactivity: nanG Position: 155 (position.label in template: 155.G) Reactivity: nanG Position: 156 (position.label in template: 156.C) Reactivity: 0C Position: 157 (position.label in template: 157.A) Reactivity: 0.5A Position: 158 (position.label in template: 158.C) Reactivity: 0C Position: 159 (position.label in template: 159.C) Reactivity: 0C Position: 160 (position.label in template: 160.A) Reactivity: nanA Position: 161 (position.label in template: 161.A) Reactivity: nanA Position: 162 (position.label in template: 162.U) Reactivity: nanU Position: 163 (position.label in template: 163.G) Reactivity: nanG Position: 164 (position.label in template: 164.A) Reactivity: nanA Position: 165 (position.label in template: 165.U) Reactivity: nanU Position: 166 (position.label in template: 166.U) Reactivity: nanU Position: 167 (position.label in template: 167.U) Reactivity: nanU Position: 168 (position.label in template: 168.A) Reactivity: nanA Position: 169 (position.label in template: 169.A) Reactivity: nanA Position: 170 (position.label in template: 170.C) Reactivity: nanC Position: 171 (position.label in template: 171.G) Reactivity: nanG Position: 172 (position.label in template: 172.C) Reactivity: nanC Position: 173 (position.label in template: 173.A) Reactivity: nanA Position: 174 (position.label in template: 174.G) Reactivity: nanG Position: 175 (position.label in template: 175.U) Reactivity: nanU Position: 176 (position.label in template: 176.A) Reactivity: nanA Position: 177 (position.label in template: 177.C) Reactivity: nanC Position: 178 (position.label in template: 178.A) Reactivity: nanA Position: 179 (position.label in template: 179.C) Reactivity: nanC Position: 180 (position.label in template: 180.U) Reactivity: nanU Position: 181 (position.label in template: 181.C) Reactivity: nanC Position: 182 (position.label in template: 182.U) Reactivity: nanU Position: 183 (position.label in template: 183.G) Reactivity: nanG Position: 184 (position.label in template: 184.G) Reactivity: nanG Position: 185 (position.label in template: 185.C) Reactivity: nanC Position: 186 (position.label in template: 186.A) Reactivity: nanA Position: 187 (position.label in template: 187.G) Reactivity: nanG Position: 188 (position.label in template: 188.U) Reactivity: nanU Position: 189 (position.label in template: 189.U) Reactivity: nanU Position: 190 (position.label in template: 190.G) Reactivity: nanG Position: 191 (position.label in template: 191.A) Reactivity: nanA Position: 192 (position.label in template: 192.C) Reactivity: nanC Position: 193 (position.label in template: 193.C) Reactivity: nanC Position: 194 (position.label in template: 194.G) Reactivity: nanG Position: 195 (position.label in template: 195.U) Reactivity: nanU Position: 196 (position.label in template: 196.3')3' 10 20 30 50 100 150


ptsH-ptsI-crr



Position: 1787-1941, Conformation: #1







Retained alignments:


   NC_003551.1       GC.C.G.C...G...C......U...A......A....G...cG.G..A...U.C....G....C...C......A.---....-...-...-..-...-...-...-aggaaguagg........................gcucaaaccg...--.-...-.-....-..--..--....-..-.....-.....--...-...-...-...-.--.-...............................................................-.-.-C......A..U.C....GU..C....A..G...G..U..-..-..-..C..G.....A...G...U........UC.G.G..AA....U......G......AUG.GUGGAAA...........................................................CACC..U...GC.....CGC..C.G..C...GG......UAC...U.A...A.U..C.....G.A....C..G..A.......A.....U.....UC..AU.C....G.A....A.......G...U...AGg.ccUC.GA.CUUCGUGAGCCUC....GGUACCAACGACCUCACCCAG.UACACGUUGGCGGUCGA.CAG
   NC_004557.1       --.-.-.-...-...-......-...-......-....U....A.U..A...U.U...aG....A...A......G.AGU....G...C...A..A...A...G...A...............................................AG.A...A.C....U..AA..GA....A..A.....A.....GA...A...A...G...U.AU.A...............................................................G.C.UU......U..U.A....AU..G....A..A...A..A..U..A..U..A..A.....A...A...G........UA.G.G..AA....U......A......AUG.GUUGAAA...........................................................UUCC..A...UC.....AGC..A.G..C...UA......UUA...U.G...U.C..A.....G.A....U..G..U.......A.....U.....UA..GC.U....A.A....A.......G...A...AG....UA.GA.CUUUUUUAGUAUA....GGUACAAAUGAUUUAAUUCAA.UAUACUAUAGCAGUGGA.UAG
   NC_004603.1       GC.U.U.A...A...G......A...A......C....G....C.A..A...U.C....G....A...A......G.AGU....A...C...A..A...A...G...C...............................................AG.A...G.C....U..AC..GU....G..C.....U.....GA...A...G...G...U.CU.U...............................................................G.C.AU......U..C.G....AC..G....A..A...A..A..C..A..U..C..G.....A...A...A........UC.G.G..UG....U......A......AUG.GUUGAAA...........................................................CACC..U...GC.....AGC..A.G..C...AG......CGA...U.C...G.C..A.....C.A....C..C..A.......C.....C.....UA..GC.G....A.A....G.......G...A...AG....UA.UC.UUUCUUCUCUAUC....GGUACCAACGACCUUACUCAG.UACACUCUAGCGGUAGA.CCG
   NC_004757.1       GC.U.G.C...A...-......-...-......A....A....U.G..A...U.C....G....A...A......U.UUG....C...C...A..A...A...C...A...............................................GA.G...C.C....U..GC..GC....G..A.....U.....GA...A...A...A...C.AA.G...............................................................C.C.UU......U..C.G....AC..G....A..A...A..A..C..G..U..C..A.....G...G...A........UA.G.G..UU....G......C......AUG.GUGGAGA...........................................................UUCC..G...GC.....AAC..G.G..C...AC......UGA...-.-...-.-..G.....C.C....U..C..G.......A.....A.....CU..GU.U....C.A....U.......GcgcA...AG....CUgGA.UUUUUUAUCCAUC....GGCACCAAUGAUCUCAUCCAG.UACACGCUUGCAAUCGA.CCG
   NC_005126.1       GC.U.G.A...A...A......G...U......A....G....A.A..C...U.U....G....A...A......U.UGC....U...G...A..A...A...G...G...............................................CC.A...G.C....U..UC..GC....G..A.....A.....GA...A...G...G...U.AA.A...............................................................A.A.AU......U..C.G....AU..G....A..A...G..C..A..A..U..C..G.....A...A...G........UG.G.G..AG....U......G......AUG.AUAGAAA...........................................................CACC..A...GC.....UUC..A.G..C...AG......UUA...U.U...G.C..U.....C.A....U..C..A.......C.....C.....UG..GC.A....A.A....A.......G...A...AG....UU.GA.CUUUUUCAGUAUU....GGGACAAACGAUCUAACUCAG.UAUACUCUAGCUGUAGA.CCG
   NC_006300.1       AU.U.G.A...A...A......U...C......C....G....U.U..A...U.C....G....A...A......A.CUU....U...A...A..A...A...C...A...............................................AG.A...A.U....U..AC..GC....A..C.....C.....GA...A...G...G...U.AA.A...............................................................G.C.CU......U..U.G....AU..G....A..A...A..A..U..A..U..U..C.....A...A...A........UC.G.G..UG....U......A......AUGuGUG-AAA...........................................................CGCC..G...UC.....AGC..U.G..C...AG......UAA...A.U...G.C..A.....A.A....A..U..U.......C.....U.....UA..GC.A....A.A....A.......G...A...AG....UG.GA.CUUCUUCAGUAUC....GGUACCAAUGAUUUAACUCAA.UAUACUUUAGCGGUUGA.CCG
   NC_007292.1       --.-.-.-...-...-......U...A......C....A....G.A..A...U.U....A....A...A......U.UUU....U...U...A..A...A...A...A..............................................cAC.A...A.U....U..AC..GU....C..A.....A.....GA...A...G...G...A.AA.A...............................................................A.A.AU......U..U.G....AC..G....A..A...A..A..U..A..U..U..A.....A...A...G........UA.G.G..UG....U......C......AUG.AUCGAAA...........................................................CUCC..U...GC.....UUC..U.G..C...AA......UUA...U.C...G.C..U.....C.A....U..C..A.......U.....U.....UA..GU.U....A.A....A.......G...A...AG....UG.GA.UUUUUUCAGUAUU....GGAACUAACGAUUUAACUCAA.UAUACACUUGCAGUAGA.UCG
   NC_007530.2       --.-.-.-...-...-......-...-......-....-....-.-..-...-.-....-....-...-......-.CUU....A...U...U..A...G...-...-...............................................AA.G...A.A....A..AA..GC....G..A.....A.....--...-...-...-...-.--.-acuuguagaag.....................................uggguacaacu....G.U.UU......C..U.G....AU..U....-..-...-..C..U..A..U..U..G.....A...A...G........UU.G.G..UA....U......G......AUG.GUUGAAA...........................................................UCCC..A...GC.....UUC..A.G..C...AG......UAU...U.A...G.C..A.....G.A....U..C..A.......A.....U.....UC..GC.A....A.A....A.......G...A...AG....UU.GA.UUUCUUCUCUAUC....GGAACAAAUGACUUAAUUCAA.UACACAAUGGCUGCAGA.CCG
   NC_007614.1       GC.U.G.C...A...U......-...-......-....U....U.G..A...U.C....C....A...A......A.GCG....C...C...A..A...A...C...A...............................................AA.G...C.C....U..GC..GU....A..A.....C.....GA...A...A...A...G.AU.U...............................................................C.C.UU......U..U.G....AC..G....A..A...A..A..A..G..U..G..C.....A...G...G........UG.G.G..AG....G......A......AUG.AUAGAAA...........................................................UUCC..A...GC.....CGC..U.G..CgcuGA......G-U...C.U...U.G..A.....C.A....U..U..U.......U.....C.....AU..GC.G....C.A....A.......G...-...-C....UC.GA.UUUCCUGUCAAUC....GGCACCAAUGAUCUCAUCCAG.UAUACGCUGGCGAUAGA.CCG
   NC_007954.1       GC.U.G.A...U...C......G...G......C....C....A.A..A...U.U....G....A...G......C.UAU....G...U...A..A...A...G...C...............................................GC.A...A.U....U..AA..UC....G..A.....G.....CA...A...G...A...A.AA.A...............................................................G.G.AU......U..U.G....GU..G....-..-...-..A..A..C..U..C..A.....G...C...C........UU.G.G..CA....U......A......GUC.AUAGAAA...........................................................CACC..G...GC.....UGC..A.G..U...AU......UAA...A.U...U.U..A.....C.C....C..A..Gu.....uU.....A.....UU..GC.C....C.U....-.......-...U...AU....UG.GA.CUUUGUCAGCAUA....GGCAGUAACGAUCUAAGCCAG.UAUACUCAAGCAGUAGA.CAG
   NC_008344.1       AC.U.G.C...A...-......-...-......A....A....U.G..A...U.C....G....A...A......U.UUG....C...C...A..A...G...C...A...............................................AA.G...U.U....U..AC..GA....G..A.....U.....GA...A...A...A...C.AA.G...............................................................C.C.UU......U..C.A....AU..G....A..A...A..C..U..A..U..U..A.....A...A...A........UC.G.G..CU....G......C......AUG.GUGGAAA...........................................................UCCC..G...GC.....AAC..U.G..C...GC......UGA...-.-...-.-..G.....C.C....U..U..G.......-.....-.....-A..GC.U....A.U....UcaugcgcA...A...AC....UG.GA.UUUUUUAUCCAUC....GGCACCAAUGAUCUCAUUCAG.UACACACUGGCAAUUGA.CCG
   NC_008345.1       GU.U.G.G...C...C......A...A......A....C....A.A..G...U.C....G....U...U......A.AAG....A...A...G..A...A...G...C...............................................CG.A...A.A....A..--..--....-..-.....-.....--...-...-...-...-.--.-acugg.................................................cuauc....-.-.--......G..A.U....AU..U....A..G...U..G..G..G.aU..C..C.....A...A...A........UU.G.G..CA....U......C......AUG.AUUGAA-gu...................................................gc....CAUC..G...GC.....AGC..C.G..U...AA......---...U.G...G.C..A.....G.A....U..G..U.......G.....U.....UG..GC.C....G.A....A.......C...A...UG....UC.GA.CUUUUUCUCCAUU....GGUACUAAUGAUUUGACUCAA.UAUACCUUAGCGAUUGA.UCG
   NC_008525.1       --.-.-.A...U...C......U...A......U....G....A.U..G...A.C....G....A...A......C.GUC....A...A...A..A...-...-...-...............................................GA.U...-.-....-..GG..UC....G..A.....U.....GC...U...G...G...A.CA.A...............................................................G.A.AG......U..U.G....GU..G....-..-...-..A..A..A..U..C..C.....A...A...G........UC.G.G..UA....U......G......AUG.AUGGAAA...........................................................UCCC..A...GC.....UGC..U.G..C...UA......UGA...U.U...G.C..U.....G.A....U..A..A.......G.....U.....UG..GC.U....A.G....G.......U...A...UG....UA.GA.CUUCUUUAGUAUU....GGAACAAACGAUUUGAUUCAA.UACUCAUUCGCUGCUGA.UCG
   NC_008700.1       --.-.-.-...-...-......-...-......U....C....U.G..C...U.G....G....A...A......A.CCU....G...U...C..G...C...C...G...............................................UG.A...A.C....U..GG..AC....G..A.....U.....GA...A...G...A...A.AA.A...............................................................G.G.GU......U..U.G....GC..G....A.uA...U..C..A..G..-..-..-.....-...C...C........UC.G.G..CA....U......A......GUG.GUGGAAA...........................................................CCCC..G...GC.....AGC..C.G..U...GCu....cAAU...C.U...G.C..C.....A.G....C..C..A.......U.....G.....UU..AC.C....C.A....U.......G...C...--....UG.GA.CUUUGUCAGCAUA....GGCACCAACGACCUCACCCAA.UAUGCCAUGGCUGCCGA.CAG
   NC_008709.1       --.-.-.-...-...-......-...-......-....-....-.-..U...U.C....G....U...C......G.ACU....A...A...A..A...-...-...-gagauuuugga.....................ugaacugaaaga...GG.A...A.C....U..UA..CU....G..C.....A.....GA...A...G...G...U.GU.C...............................................................G.A.UU......U..U.G....AU..A....A..A...G..A..A..A..U..C..G.....A...A...A........UC.G.G..UG....U......U......AUG.AUCGAAA...........................................................CACC..G...GC.....AGC..G.G..C...AG......CUA...U.U...G.C..G.....C.A....U..C..A.......C.....U.....UG..AU.U....A.A....A.......G...A...AG....UU.GA.UUUUUUCAGUAUU....GGCACAAAUGAUUUAACCCAA.UACACCCUUGCUGUAGA.CCG
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   NZ_OU907312.1     CC.U.A.C...A...A......G...A......G....C....A.G..C...U.A....G....C...A......C.GGU....U...G...A..A...G...C...A...............................................GC.A...G.U....U..AC..AC....G..C.....U.....GA...A...A...A...A.CA.G...............................................................C.C.GU......U..U.G....AU..C....C..G...C..A..G..A..U..C..A.....G...C...G........UC.G.G..GA....U......U......AUG.GUUGAGA...........................................................CCCC..G...GCa..gcAGC..C.G..U...GA......UGG...C.C...U.C..C.....-.-....-..C..A.......U.....U.....UA..GC.U....C.A....A.......A...U...CG....UC.GA.CUUUUUAAGCAUU....GGGACCAAUGAUCUCACGCAG.UACACCUUAGCGGUGGA.CCG
   NZ_OW711693.1     --.-.-.-...-...G......G...A......A....A....U.G..G...U.A....G....A...A......A.AGG....C...U...A..A...A...A...A...............................................GC.A...A.U....U..GC..UU....G..A.....G.....GA...A...G...G...UcAU.A...............................................................A.A.GU......U..U.C....-U..G....A..A...C..A..C..G..U..U..G.....A...U...A........UA.G.G..GA....U......A......AUG.AUAGAGA...........................................................---C..G...CC.....UGC..U.G..C...AG......UUA...U.G...C.U..Ua...gC.G....A..U..G.......U.....U.....UU..GG.C....A.G....A.......G..cA...UG....UG.GA.CUUUUUCAGCAUC....GGCUCCAAUGACCUUAUCCAA.UAUACAACGGCAACAGA.CCG


   Structure         ((.(.(.(...(...............................(.(..(...(.(......................(((...........................................................................)).).............((..((.........................................................................................................).).)).........(.(....((..(..............(..(..(..(..(..(.......................(.(.(..((...................((.(((...............................................................))))..)..........)))..).)..............)))...).)...)..........).)....)..)..).......................((.(........................................................)))......)))))..))))).)......(((........)))


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ptsH-ptsI-crr



Position: 1787-1941, Conformation: #1







97% 90% 75% 50% Nucleotide present N N N Nucleotide identify E < 0.1 Base-pair covariation E < 0.05 Helix-level covariation 97% 90% 75%

R R R R R R Y Y R Y R R U A R R U G G Y R U A U G R U G A R A Y C C C G C G C R Y Y G C R Y Y U G C A A R G A R G U G A Y U U Y U U Y Y A U Y G G A C A A Y G A Y Y U R A Y Y C A R U A Y A C U R G C G Y G A Y C G 5'