ptsH-ptsI-crr



Position: 1602-1771, Conformation: #1







DMS reactivity > 1.0 0.0 0.4 0.7 G/U/No data
Position: 0 (position.label in template: 0.5')5' Position: 1 (position.label in template: 1.A) Reactivity: nanA Position: 2 (position.label in template: 2.C) Reactivity: nanC Position: 3 (position.label in template: 3.A) Reactivity: nanA Position: 4 (position.label in template: 4.A) Reactivity: nanA Position: 5 (position.label in template: 5.A) Reactivity: nanA Position: 6 (position.label in template: 6.G) Reactivity: nanG Position: 7 (position.label in template: 7.A) Reactivity: nanA Position: 8 (position.label in template: 8.G) Reactivity: nanG Position: 9 (position.label in template: 9.C) Reactivity: nanC Position: 10 (position.label in template: 10.U) Reactivity: nanU Position: 11 (position.label in template: 11.G) Reactivity: nanG Position: 12 (position.label in template: 12.C) Reactivity: nanC Position: 13 (position.label in template: 13.C) Reactivity: nanC Position: 14 (position.label in template: 14.A) Reactivity: nanA Position: 15 (position.label in template: 15.U) Reactivity: nanU Position: 16 (position.label in template: 16.A) Reactivity: nanA Position: 17 (position.label in template: 17.C) Reactivity: nanC Position: 18 (position.label in template: 18.A) Reactivity: nanA Position: 19 (position.label in template: 19.U) Reactivity: nanU Position: 20 (position.label in template: 20.G) Reactivity: nanG Position: 21 (position.label in template: 21.A) Reactivity: nanA Position: 22 (position.label in template: 22.A) Reactivity: nanA Position: 23 (position.label in template: 23.C) Reactivity: nanC Position: 24 (position.label in template: 24.U) Reactivity: nanU Position: 25 (position.label in template: 25.U) Reactivity: nanU Position: 26 (position.label in template: 26.C) Reactivity: nanC Position: 27 (position.label in template: 27.C) Reactivity: nanC Position: 28 (position.label in template: 28.C) Reactivity: nanC Position: 29 (position.label in template: 29.G) Reactivity: nanG Position: 30 (position.label in template: 30.A) Reactivity: nanA Position: 31 (position.label in template: 31.A) Reactivity: nanA Position: 32 (position.label in template: 32.A) Reactivity: nanA Position: 33 (position.label in template: 33.G) Reactivity: nanG Position: 34 (position.label in template: 34.A) Reactivity: nanA Position: 35 (position.label in template: 35.A) Reactivity: nanA Position: 36 (position.label in template: 36.G) Reactivity: nanG Position: 37 (position.label in template: 37.A) Reactivity: nanA Position: 38 (position.label in template: 38.G) Reactivity: nanG Position: 39 (position.label in template: 39.A) Reactivity: 1A Position: 40 (position.label in template: 40.A) Reactivity: 0.5A Position: 41 (position.label in template: 41.C) Reactivity: 0.5C Position: 42 (position.label in template: 42.C) Reactivity: 0C Position: 43 (position.label in template: 43.C) Reactivity: 0C Position: 44 (position.label in template: 44.G) Reactivity: nanG Position: 45 (position.label in template: 45.U) Reactivity: nanU Position: 46 (position.label in template: 46.U) Reactivity: nanU Position: 47 (position.label in template: 47.C) Reactivity: 1C Position: 48 (position.label in template: 48.C) Reactivity: 1C Position: 49 (position.label in template: 49.U) Reactivity: nanU Position: 50 (position.label in template: 50.C) Reactivity: 1C Position: 51 (position.label in template: 51.G) Reactivity: nanG Position: 52 (position.label in template: 52.G) Reactivity: nanG Position: 53 (position.label in template: 53.C) Reactivity: 0.5C Position: 54 (position.label in template: 54.U) Reactivity: nanU Position: 55 (position.label in template: 55.G) Reactivity: nanG Position: 56 (position.label in template: 56.G) Reactivity: nanG Position: 57 (position.label in template: 57.C) Reactivity: 0C Position: 58 (position.label in template: 58.G) Reactivity: nanG Position: 59 (position.label in template: 59.C) Reactivity: 0C Position: 60 (position.label in template: 60.G) Reactivity: nanG Position: 61 (position.label in template: 61.C) Reactivity: 1C Position: 62 (position.label in template: 62.U) Reactivity: nanU Position: 63 (position.label in template: 63.A) Reactivity: 1A Position: 64 (position.label in template: 64.U) Reactivity: nanU Position: 65 (position.label in template: 65.C) Reactivity: 0.5C Position: 66 (position.label in template: 66.C) Reactivity: 0C Position: 67 (position.label in template: 67.G) Reactivity: nanG Position: 68 (position.label in template: 68.U) Reactivity: nanU Position: 69 (position.label in template: 69.A) Reactivity: 0A Position: 70 (position.label in template: 70.U) Reactivity: nanU Position: 71 (position.label in template: 71.C) Reactivity: 0C Position: 72 (position.label in template: 72.G) Reactivity: nanG Position: 73 (position.label in template: 73.C) Reactivity: 0C Position: 74 (position.label in template: 74.G) Reactivity: nanG Position: 75 (position.label in template: 75.A) Reactivity: 1A Position: 76 (position.label in template: 76.U) Reactivity: nanU Position: 77 (position.label in template: 77.G) Reactivity: nanG Position: 78 (position.label in template: 78.G) Reactivity: nanG Position: 79 (position.label in template: 79.A) Reactivity: 0A Position: 80 (position.label in template: 80.U) Reactivity: nanU Position: 81 (position.label in template: 81.C) Reactivity: 0C Position: 82 (position.label in template: 82.G) Reactivity: nanG Position: 83 (position.label in template: 83.U) Reactivity: nanU Position: 84 (position.label in template: 84.A) Reactivity: 1A Position: 85 (position.label in template: 85.G) Reactivity: nanG Position: 86 (position.label in template: 86.A) Reactivity: 1A Position: 87 (position.label in template: 87.G) Reactivity: nanG Position: 88 (position.label in template: 88.A) Reactivity: 1A Position: 89 (position.label in template: 89.G) Reactivity: nanG Position: 90 (position.label in template: 90.A) Reactivity: 0A Position: 91 (position.label in template: 91.U) Reactivity: nanU Position: 92 (position.label in template: 92.C) Reactivity: 0C Position: 93 (position.label in template: 93.C) Reactivity: 0C Position: 94 (position.label in template: 94.U) Reactivity: nanU Position: 95 (position.label in template: 95.G) Reactivity: nanG Position: 96 (position.label in template: 96.C) Reactivity: 0C Position: 97 (position.label in template: 97.G) Reactivity: nanG Position: 98 (position.label in template: 98.C) Reactivity: 0C Position: 99 (position.label in template: 99.G) Reactivity: nanG Position: 100 (position.label in template: 100.A) Reactivity: 0A Position: 101 (position.label in template: 101.U) Reactivity: nanU Position: 102 (position.label in template: 102.C) Reactivity: 0C Position: 103 (position.label in template: 103.A) Reactivity: 0.5A Position: 104 (position.label in template: 104.G) Reactivity: nanG Position: 105 (position.label in template: 105.C) Reactivity: 0C Position: 106 (position.label in template: 106.U) Reactivity: nanU Position: 107 (position.label in template: 107.C) Reactivity: 1C Position: 108 (position.label in template: 108.C) Reactivity: 0C Position: 109 (position.label in template: 109.G) Reactivity: nanG Position: 110 (position.label in template: 110.C) Reactivity: 0C Position: 111 (position.label in template: 111.G) Reactivity: nanG Position: 112 (position.label in template: 112.C) Reactivity: 0C Position: 113 (position.label in template: 113.U) Reactivity: nanU Position: 114 (position.label in template: 114.A) Reactivity: 0.5A Position: 115 (position.label in template: 115.U) Reactivity: nanU Position: 116 (position.label in template: 116.C) Reactivity: 0C Position: 117 (position.label in template: 117.C) Reactivity: 0C Position: 118 (position.label in template: 118.U) Reactivity: nanU Position: 119 (position.label in template: 119.G) Reactivity: nanG Position: 120 (position.label in template: 120.C) Reactivity: 0.5C Position: 121 (position.label in template: 121.G) Reactivity: nanG Position: 122 (position.label in template: 122.U) Reactivity: nanU Position: 123 (position.label in template: 123.G) Reactivity: nanG Position: 124 (position.label in template: 124.C) Reactivity: 1C Position: 125 (position.label in template: 125.C) Reactivity: 0C Position: 126 (position.label in template: 126.U) Reactivity: nanU Position: 127 (position.label in template: 127.C) Reactivity: 0C Position: 128 (position.label in template: 128.G) Reactivity: nanG Position: 129 (position.label in template: 129.G) Reactivity: nanG Position: 130 (position.label in template: 130.C) Reactivity: 0C Position: 131 (position.label in template: 131.U) Reactivity: nanU Position: 132 (position.label in template: 132.U) Reactivity: nanU Position: 133 (position.label in template: 133.U) Reactivity: nanU Position: 134 (position.label in template: 134.C) Reactivity: 0C Position: 135 (position.label in template: 135.G) Reactivity: nanG Position: 136 (position.label in template: 136.G) Reactivity: nanG Position: 137 (position.label in template: 137.U) Reactivity: nanU Position: 138 (position.label in template: 138.A) Reactivity: 0A Position: 139 (position.label in template: 139.A) Reactivity: 1A Position: 140 (position.label in template: 140.A) Reactivity: 1A Position: 141 (position.label in template: 141.U) Reactivity: nanU Position: 142 (position.label in template: 142.U) Reactivity: nanU Position: 143 (position.label in template: 143.G) Reactivity: nanG Position: 144 (position.label in template: 144.C) Reactivity: 0C Position: 145 (position.label in template: 145.G) Reactivity: nanG Position: 146 (position.label in template: 146.C) Reactivity: 0C Position: 147 (position.label in template: 147.A) Reactivity: 1A Position: 148 (position.label in template: 148.U) Reactivity: nanU Position: 149 (position.label in template: 149.U) Reactivity: nanU Position: 150 (position.label in template: 150.A) Reactivity: 1A Position: 151 (position.label in template: 151.U) Reactivity: nanU Position: 152 (position.label in template: 152.G) Reactivity: nanG Position: 153 (position.label in template: 153.U) Reactivity: nanU Position: 154 (position.label in template: 154.U) Reactivity: nanU Position: 155 (position.label in template: 155.C) Reactivity: 0C Position: 156 (position.label in template: 156.C) Reactivity: 0C Position: 157 (position.label in template: 157.C) Reactivity: 0C Position: 158 (position.label in template: 158.G) Reactivity: nanG Position: 159 (position.label in template: 159.A) Reactivity: 0.5A Position: 160 (position.label in template: 160.U) Reactivity: nanU Position: 161 (position.label in template: 161.G) Reactivity: nanG Position: 162 (position.label in template: 162.A) Reactivity: 1A Position: 163 (position.label in template: 163.U) Reactivity: nanU Position: 164 (position.label in template: 164.C) Reactivity: 0C Position: 165 (position.label in template: 165.A) Reactivity: 0A Position: 166 (position.label in template: 166.U) Reactivity: nanU Position: 167 (position.label in template: 167.C) Reactivity: 0C Position: 168 (position.label in template: 168.U) Reactivity: nanU Position: 169 (position.label in template: 169.C) Reactivity: 0C Position: 170 (position.label in template: 170.U) Reactivity: nanU Position: 171 (position.label in template: 171.G) Reactivity: nanG Position: 172 (position.label in template: 172.U) Reactivity: nanU Position: 173 (position.label in template: 173.U) Reactivity: nanU Position: 174 (position.label in template: 174.G) Reactivity: nanG Position: 175 (position.label in template: 175.A) Reactivity: nanA Position: 176 (position.label in template: 176.A) Reactivity: nanA Position: 177 (position.label in template: 177.G) Reactivity: nanG Position: 178 (position.label in template: 178.A) Reactivity: nanA Position: 179 (position.label in template: 179.A) Reactivity: nanA Position: 180 (position.label in template: 180.G) Reactivity: nanG Position: 181 (position.label in template: 181.U) Reactivity: nanU Position: 182 (position.label in template: 182.G) Reactivity: nanG Position: 183 (position.label in template: 183.C) Reactivity: nanC Position: 184 (position.label in template: 184.G) Reactivity: nanG Position: 185 (position.label in template: 185.U) Reactivity: nanU Position: 186 (position.label in template: 186.G) Reactivity: nanG Position: 187 (position.label in template: 187.C) Reactivity: nanC Position: 188 (position.label in template: 188.A) Reactivity: nanA Position: 189 (position.label in template: 189.C) Reactivity: nanC Position: 190 (position.label in template: 190.U) Reactivity: nanU Position: 191 (position.label in template: 191.G) Reactivity: nanG Position: 192 (position.label in template: 192.C) Reactivity: nanC Position: 193 (position.label in template: 193.G) Reactivity: nanG Position: 194 (position.label in template: 194.C) Reactivity: nanC Position: 195 (position.label in template: 195.A) Reactivity: nanA Position: 196 (position.label in template: 196.A) Reactivity: nanA Position: 197 (position.label in template: 197.A) Reactivity: nanA Position: 198 (position.label in template: 198.G) Reactivity: nanG Position: 199 (position.label in template: 199.A) Reactivity: nanA Position: 200 (position.label in template: 200.G) Reactivity: nanG Position: 201 (position.label in template: 201.A) Reactivity: nanA Position: 202 (position.label in template: 202.U) Reactivity: nanU Position: 203 (position.label in template: 203.C) Reactivity: nanC Position: 204 (position.label in template: 204.G) Reactivity: nanG Position: 205 (position.label in template: 205.A) Reactivity: nanA Position: 206 (position.label in template: 206.A) Reactivity: nanA Position: 207 (position.label in template: 207.A) Reactivity: nanA Position: 208 (position.label in template: 208.U) Reactivity: nanU Position: 209 (position.label in template: 209.C) Reactivity: nanC Position: 210 (position.label in template: 210.U) Reactivity: nanU Position: 211 (position.label in template: 211.3')3' 10 20 30 50 100 150 200


ptsH-ptsI-crr



Position: 1602-1771, Conformation: #1







Retained alignments:


   NC_002570.2       GA.A.C.U..U...U.C.C...U.A....C.C....U.....A.C.A.G...CUA..C..CG...A...AA.............................GAGC...U...U...AA.....UCCGUUCC....UUGG.....UUUCCGGGC..GAUUC..G....U....C..U.GuG.CC....U.U.GAA.AA.AcA.A..G.A.UA....................................................................UU....U.U.C...CG.....G.A..CC.-.-...CAAC.U..C...C..G..U.G.C..CUUg.....cuU.C.......G..cG..C.....A..A..G...C...A..C.......A...-...-...-...-.....U....A..C..G...GU.....A...A........C.UU.A.AAG........G......UGAUGUUUCCAAUG...AU..C......G..C...C..ACC...C...U...U...G...A.......................................................AGA.G.C.U.U..C..G..C..C.............................................A.A.G..C.....-..-..-..A.A..A....A...G...C.G.....A..U.C.A..U
   NC_003910.7       UC.A.U.U..A...C.C.C...U.A....-.-....-.....-.-.-.U...UUC..C..CUauuA...AC.............................GAAG...A...A...AA.....UCCUUUUC....UUGG.....UUGGCGCGG..CAUAC..G....A....A..U.C.A.CC....U.U.AGA.UC.A.-.-..-.-.--cccu.........................................................gaaa...UA....U.U.U...CU.....G.G..UA.-.-...CAAG.U..A...C..G..U.G.C..CAU........G.U.......U...A..C.....G..G..G...C...AaaU.......C...A...A...G...G.....A....U..U..A..aAU.....A...A........C.UU.A.GAG........A......UCAUGUUGCCUAUG...AU..C......U..C...G..GGU...G...U...U...G...A.......................................................AGA.A.A.U.U..G..A..U..G.............................................A.A.G..C.....-..-..-..-.G..A....A...U...A.G.....A..U.U.A..A
   NC_004578.1       UC.G.C.U..G...U.C.C...U.A....-.-....-.....-.-.-.C...UUC..C..CG...AucaAG.............................GAAG...A...C...AA.....CCCGUUUC....UCGG.....CUGGCGCGG..UAUUC..G....C....G..U.C.-.--....-.-.---.--.-.-.-..-.-.--acccucgaccacc......................................cggaaaucuuucug...--....-.-.-...--.....-.-..-G.U.U...CAGA.C..C...C..G..C.G.C..CAU........G.C.......U...C..A.....A..G..G...C...-..-.......C...A...G...C...G.....A....A..G..Gc.cUGa..acA...A........C.CU.G.CGC........A......UUCUGUUGCCGAUG...AU..U......-..-...-..---...-...-...-...-...-uccagc.......................................acccaug...---.-.-.-.-..-..-..-..-aagug...............................gaagag...-.-.-..-.....G..C..G..C.U..G....-...-...-.-.....C..A.C.C..U
   NC_004603.1       GA.U.C.U..A...C.C.G...U.A....C.A....U.....G.G.A.U...CUA..C..CU...C...AA.............................GAGA...U...G...AA.....CCCGUUCC....UAGG.....UUGGCGUGC..AGUAC..G....U....A..U.C.A.GC....U.U.GGA.UC.G.U.C..G.U.GA....................................................................AA....U.C.C...UU.....C.G..UG.A.U...CAAC.U..A...C..G..U.G.G..CAU........C.C.......U...A..C.....G..U..G...C...G..U.......C...U...G...C...A.....C....A..C..G...GU.....A...A........G.CU.A.CGU........A......UCAUGUUCCCAAUG...AU..C......A..U...C..UCU...G...U...U...G...A.......................................................AGA.A.A.U.C..C..G..C..G.............................................A.-.-..-.....G..C..U..U.-..-....-...A...A.G.....A..A.C.G..C
   NC_004757.1       AA.C.C.-..-...-.U.G...C.G....C.A....G.....C.G.C.C...UAC..C..GC...A...CA.............................GCAC...C...C...AA.....CCCGGCAC....UCGG.....GCUGCGCGC..GAUCC..G....C....C..-.-.-.--....-.-.---.--.-.-.-..-.-.--ugagucuggccgaac..................................ccggcauguuucuggu...--....-.-.-...--.....-.-..--.-.G...CAAU.U..G...C..G..U.G.C..GAU........C.C.......U...G..C.....G..C..G...C...U..U.......C...C...G...U...U.....C....U..G..G...GC.....A...A........A.AC.C.CGG........A......UUCUGAUUCCGAUG...C-..-......-..-...-..---...-...-...-...-...-ugu..............................................gca...---.-.-.-.-..-..-..-..-gc......................................ag...-.-.-..-.....C..C..G..G.G..A....A...G...U.C.....G..A.C.C..A
   NC_005126.1       AA.U.C.U..G...C.C.C...U.A....U.A....U.....G.A.A.U...CUA..C..CG...A...AA.............................GAAG...A...G...AA.....UCCAUUCC....UUGG.....UUGGCGUGC..AAUUC..G....U....A..U.U.-.UG...cC.U.UGA.UC.G.A.A..A.A.GA....................................................................GA....U.C.U...UA.....C.A..UU.C.U...CAGU.U..A...C..G..U.G.C..UAU........C.U.......U...A..C.....G..U..G...C...A..U.......C...U...G...C...U.....U....U..C..G...GU.....A...A........A.UU.A.CGU........A......UUAUGUUUCCAAUG...AU..U......A..U...U..UCU...G...U...A...G...A.......................................................AGA.A.G.U.A..C..A..A..G.............................................A.G.C..U.....G..A..A..A.G..U....A...G...A.A.....C..U.U.G..A
   NC_006055.1       AA.A.U.U..A...U.C.A...U.A....C.U....U.....U.G.A.A...UUC..C..CA...C...AU.............................GAAA...U...G...AA.....CCCAUUCU....UAGG.....AUAUAGAGC..UGUUC..G....U....U..U.U.A.CA....U.U.AGA.CA.G.A.A..A.A.GA....................................................................UA....U.U.U...UU.....A.A..AG.A.U...CAAU.U..Aa.gA..G..C.U.U..UAU........U.A.......A...G..A.....-..-..G...C...U..A.......G...U...G...C...U.....C....A..U..G...GU.....G...A........A.UU.A.GGA........A......UUAUGUUCCCAAUG...AU..U......G..C...A..ACU...G...U...U...G...A.......................................................UGA.A.U.U.-..C..-..-..-aa......................................gc...-.-.-..G.....U..G..C..U.A..A....A...G...C.A.....A..U.C.G..U
   NC_006300.1       GA.A.U.U..A...C.C.U...U.A....U.A....U.....G.A.A.U...CUG..C..CA...A...AA.............................GAAA...U...G...AA.....UCCGUUCU....UAGG.....CUGGCGUGC..GGUUC..G....U....A..U.C.G.CA....U.U.GGA.UC.G.U.C..G.C.GA....................................................................AA....U.C.U...UA.....A.A..UG.C.U...CAAU.U..G...C..G..U.G.C..GGU........A.U.......U...A..C.....G..U..G...C...U..U.......C...C...G...C...A.....U....U..C..G...GU.....A...A........A.UU.A.GCG........G......UAAUGUUCCCGAUG...AU..U......A..U...U..UCC...G...U...U...G...A.......................................................AGA.A.A.U.U..C..G..C..G.............................................A.A.U..U.....G..-..-..-.A..A....AuccG...U.U.....A..U.C.G..A
   NC_007645.1       AA.C.C.U..G...C.C.U...U.A....U.U....U.....C.A.G.C...UUU..A..CG...-...--.............................GAAG...A...A...AA.....CCCGUUUC....UGGG.....GUGGCGGGG..GAUAC..G....C....U..U.U.A.CG....C.U.GGA.UA.A.C.A..C.C.GG....................................................................UA....U.U.U...UC.....A.U..CA.G.C...CAGA.U..U...C..G..C.G.C..CAU........G.C.......U...G..A.....A..A..G...C...-..-.......C...G...G...-...-.....-....U..C..G...CU.....A...C........C.UC.-.---........-......--------------...--..-......-..-...-..---...-...-...-...-...-.......................................................---.-.-.-.-..-..-..-..-ggcaaccucaaaauacugu...ugcccauggucagccgucug...-.-.-..-.....-..-..-..-.G..A....U...G...A.A.....A..U.C.G..A
   NC_007712.1       GA.U.U.U..A...C.C.C...U.A....U.A....U.....G.A.A.U...UUG..C..CA...A...AA.............................GAGG...A...C...AA.....UCCGUUCC....UCGG.....CUGGCGCGC..CAUCC..G....C....A..U.C.G.GG....C.U.GGA.CC.G.U.A..A.A.GA....................................................................AA....U.G.C...UG.....C.A..CG.C.U...CAGC.U..A...C..G..C.G.C..CAU........C.C.......U...G..C.....G..C..G...C...C..U.......C...G...G...C...G.....U....U..C..G...GC.....A...A........A.CU.G.CGC........A......UUAUGUAUCCGAUG...AU..U......A..U...U..UCG...G...U...A...G...A.......................................................AGA.A.G.U.G..C..G..U..A.............................................C.C.C..U.....G.aA..G..C.A..G...gA...A...C.U.....G..U.C.G..C
   NC_007912.1       UC.U.U.U..A...C.C.C...U.A....C.U....U.....-.-.C.C...CUA..U..CG...A...A-.............................GAGG...A...A...AA.....CCCUUUCU....UGGG.....GUGGCGCGG..UAUUC..G....C....G..U.A.A.CC....C.U.CGA.UC.A.C.C..C.A.GA....................................................................GA....U.U.U...UU.....C.U..AG.G.C...CAAG.U..G...C..G..C.G.C..CAU........G.Cuu...aaA...G..C.....G..A..G...U...-..G.......U...G...G...G...G.....U....U..A..G...AU.....A...A........C.CU.G.CGC........A......UUAUGCUGCCAAUG...AU..U......A..C...C..AAU...A...U...U...-...-gccgaa........................................gucgaa...-AU.A.G.C.-..-..-..-..-.............................................-.-.-..-.....-..-..-..-.-..-....-...-...-.-.....-..-.-.-..-
   NC_007963.1       CC.C.C.U..G...C.C.G...U.A....C.U....G.....GcC.A.C...UGC..C..CC...A...-G.............................GAAG...A...C...AA.....UCCGUUCC....UCGG.....CUUGCGCGG..CAUUC..G....U....C..-.-.-.--....-.-.---.--.-.-.-..-.-.--uggccuugacgcguc..................................ccgaggugcucgagac...--....-.-.-...--.....-.-..--.-.G...CAGC.U..G...C..G..C.G.C..CCU........G.C.......U...G..A.....C..C..G...C...C..G......cC...G...G...C...G.....A....U..C..G...GC.....C...G........-.CU.G.CGC........A......UCAUGUUCCCGAUG...GU..C......A..-...-..---...-...-...-...-...-aggacaucgcc.............................gaguuccgcgcc...---.-.-.-.-..-..-..-..-gcucgcgaga.....................ucuucgaccgc...-.-.-..-.....G..U..G..C.A..G....-...-...-.-.....G..C.C.G..A
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   NZ_LT906462.1     GA.A.U.U..A...U.C.U...U.A....C.U....U.....G.A.A.C...UUA..C..CU...A...AA.............................GAGA...U...G...AA.....CCCAUUCU....UAGG.....GUAUAGAGC..GAUAC..G....U....U..U.A.U.GU....U.U.AGA.UC.A.A.C..A.A.GA....................................................................UA....U.C.U...UUa..gaA.C..AC.A.A..uUAAG.A..G...C..A..C.U.-..---........U.U.......U...A..C.....G..U..G...C...U..U.......C...U...G...A...G.....C....A..U..G...GU.....A...G........G.CU.G.AAC........A......UCAUGUUCCCAAUG...AU..C......-..-...-..---...-...-...-...-...-gcu.............................................acga...---.-.-.-.-..-..-..-..-uuc...................................aaga...-.-.-..-.....G..U..U..C.A..G....A...G...A.U.....G..C.U.A..-
   NZ_LT906463.1     GA.A.U.U..A...C.C.G...U.A....U.U....U.....G.A.A.C...UUG..C..CG...A...AA.............................GAAA...U...G...AA.....CCCAUUCC....UAGG.....UUGGCGCGC..AGUAC..G....U....A..U.U.G.CA....U.U.AGA.UC.G.U.C..G.U.GA....................................................................AA....U.U.C...UG.....C.A..UG.C.C...CAAC.U..G...C..G..U.G.C..AGU........A.U.......U...G..C.....G..C..G...C...U..U.......C...C...G...C...A.....U....U..U..G...GU.....A...A........A.UU.G.GCG........G......UGAUGUUCCCGAUG...AU..U......A..U...U..UCC...G...U...G...G...A.......................................................AGA.A.A.U.U..C..G..C..G.............................................A.A.U..U.....G..A..A..A.U..C....A...G...U.G.....A..U.C.G..A
   NZ_LT906479.1     GA.C.C.U..G...C.C.U...U.A....C.A....U.....G.A.A.C...CUG..C..CG...A...AG.............................GAAG...A...G...AA.....CCCGUUCC....UCGG.....CUGGCGCGC..CAUCC..G....C....A..U.C.G.CG....A.U.GGA.CC.G.C.C..G.U.GA....................................................................AA....U.U.C...UG.....C.A..CG.C.C...CAGC.U..G...C..G..C.G.C..CAU........C.C.......U...G..C.....G..C..G...C...C..U.......C...G...G...C...A.....U....U..C..G...GC.....A...A........A.CU.G.CGC........A......UCAUGUUCCCGAUG...AU..U......A..U...U..UCC...G...U...G...G...A.......................................................AGA.A.-.-.-..-..-..-..G.............................................-.-.-..U.....G..C..G..C.G..A....U...U...U.Ga..aaG..G.C.G..A
   NZ_OU594967.1     GA.C.C.U..C...C.C.U...U.A....U.U....U.....G.A.A.C...CUU..C..CU...A...AA.............................GAGA...U...G...AA.....UCCAUUCU....UGGG.....CUGGCGUGC..UGUAC..G....U....A..U.C.U.UC....U.U.UGA.CC.G.U.C..C.A.GA....................................................................AA....U.C.A...UG.....C.A..UA.C.U...CAGU.U..A...C..G..U.G.C..GCU........A.C.......U...U..C.....G..G..G...C...C..U.......C...A...G...C...A.....U....U..C..G...GU.....A...A........A.AU.C.CGG........A......UUAUGUUCCCGAUG...AU..U......A..U...U..GCU...G...U...A...G...A.......................................................AGA.G.A.U.U..C..G..C..U.............................................U.U.U..U.....A..A..A..A.G..A....A...G...A.A.....A..U.U.G..A
   NZ_OU907312.1     CC.G.C.U..G...C.C.C...U.A....C.C....U.....G.A.A.U...CUA..C..CC...A...CU.............................GAGA...G...C...AA.....CCCUUUCU....UAGG.....CUGCCGCGG..CGUUC..G....U....-..-.-.-.--....-.-.---.--.-.-.-..-.-.--cucuaucagcagcacc................................cugaacuacuccagauc...--....-.-.-...--.....-.-..--.-.-...CAAC.U..G...C..G..G.G.C..CAU........U.U.......U...A..C.....G..A..G...C...U..U.......C...A...G...C...G.....U....U..U..G...GC.....A...A........A.CU.C.UGC........A......UACUCUUUCCGAUG...AU..U......A..G...-..UCU..cG...U...U...G...A.......................................................AGA.A.G.U.U..C..A..C..G.............................................C.C.C..U.....A..C..A..-.A..G....A...G...C.A.....G..C.U.A..G


   Structure         ((.(.(.(..(.....(.(...(......(.(................(...(((.............................................))))................................((......(((((((....................(..(.(.(.((........(((.((..................................................................................))....).).)..........).)..)).).)...............)..)..).).)..)).........).).......)...)........)..)..)..................)...)...)...)...).....)....(..(..(...((....................((.(.(((.....................................................(((...........................................................................))).(.(.(.(.........................................................).).)..).....)..)..)..).)..)....................)..).).)..)


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ptsH-ptsI-crr



Position: 1602-1771, Conformation: #1







97% 90% 75% 50% Nucleotide present N N N Nucleotide identify E < 0.1 Base-pair covariation E < 0.05 Helix-level covariation 97% 90% 75%

Y U Y C U A Y U Y Y U C C R R G A R R R A A Y C C U U Y Y U G G Y U C G Y G A U Y C G C A R U C G Y G C U Y U R Y G G C Y R Y Y G G R A Y U R A U Y A U G U U Y C C R A U G R U Y R Y Y Y G R 5'