ptsH-ptsI-crr



Position: 1602-1771, Conformation: #0







DMS reactivity > 1.0 0.0 0.4 0.7 G/U/No data
Position: 0 (position.label in template: 0.5')5' Position: 1 (position.label in template: 1.A) Reactivity: nanA Position: 2 (position.label in template: 2.C) Reactivity: nanC Position: 3 (position.label in template: 3.A) Reactivity: nanA Position: 4 (position.label in template: 4.A) Reactivity: nanA Position: 5 (position.label in template: 5.A) Reactivity: nanA Position: 6 (position.label in template: 6.G) Reactivity: nanG Position: 7 (position.label in template: 7.A) Reactivity: nanA Position: 8 (position.label in template: 8.G) Reactivity: nanG Position: 9 (position.label in template: 9.C) Reactivity: nanC Position: 10 (position.label in template: 10.U) Reactivity: nanU Position: 11 (position.label in template: 11.G) Reactivity: nanG Position: 12 (position.label in template: 12.C) Reactivity: nanC Position: 13 (position.label in template: 13.C) Reactivity: nanC Position: 14 (position.label in template: 14.A) Reactivity: nanA Position: 15 (position.label in template: 15.U) Reactivity: nanU Position: 16 (position.label in template: 16.A) Reactivity: nanA Position: 17 (position.label in template: 17.C) Reactivity: nanC Position: 18 (position.label in template: 18.A) Reactivity: nanA Position: 19 (position.label in template: 19.U) Reactivity: nanU Position: 20 (position.label in template: 20.G) Reactivity: nanG Position: 21 (position.label in template: 21.A) Reactivity: nanA Position: 22 (position.label in template: 22.A) Reactivity: nanA Position: 23 (position.label in template: 23.C) Reactivity: nanC Position: 24 (position.label in template: 24.U) Reactivity: nanU Position: 25 (position.label in template: 25.U) Reactivity: nanU Position: 26 (position.label in template: 26.C) Reactivity: nanC Position: 27 (position.label in template: 27.C) Reactivity: nanC Position: 28 (position.label in template: 28.C) Reactivity: nanC Position: 29 (position.label in template: 29.G) Reactivity: nanG Position: 30 (position.label in template: 30.A) Reactivity: nanA Position: 31 (position.label in template: 31.A) Reactivity: nanA Position: 32 (position.label in template: 32.A) Reactivity: nanA Position: 33 (position.label in template: 33.G) Reactivity: nanG Position: 34 (position.label in template: 34.A) Reactivity: nanA Position: 35 (position.label in template: 35.A) Reactivity: nanA Position: 36 (position.label in template: 36.G) Reactivity: nanG Position: 37 (position.label in template: 37.A) Reactivity: nanA Position: 38 (position.label in template: 38.G) Reactivity: nanG Position: 39 (position.label in template: 39.A) Reactivity: 1A Position: 40 (position.label in template: 40.A) Reactivity: 1A Position: 41 (position.label in template: 41.C) Reactivity: 1C Position: 42 (position.label in template: 42.C) Reactivity: 1C Position: 43 (position.label in template: 43.C) Reactivity: 0.5C Position: 44 (position.label in template: 44.G) Reactivity: nanG Position: 45 (position.label in template: 45.U) Reactivity: nanU Position: 46 (position.label in template: 46.U) Reactivity: nanU Position: 47 (position.label in template: 47.C) Reactivity: 1C Position: 48 (position.label in template: 48.C) Reactivity: 0.5C Position: 49 (position.label in template: 49.U) Reactivity: nanU Position: 50 (position.label in template: 50.C) Reactivity: 1C Position: 51 (position.label in template: 51.G) Reactivity: nanG Position: 52 (position.label in template: 52.G) Reactivity: nanG Position: 53 (position.label in template: 53.C) Reactivity: 1C Position: 54 (position.label in template: 54.U) Reactivity: nanU Position: 55 (position.label in template: 55.G) Reactivity: nanG Position: 56 (position.label in template: 56.G) Reactivity: nanG Position: 57 (position.label in template: 57.C) Reactivity: 0C Position: 58 (position.label in template: 58.G) Reactivity: nanG Position: 59 (position.label in template: 59.C) Reactivity: 0C Position: 60 (position.label in template: 60.G) Reactivity: nanG Position: 61 (position.label in template: 61.C) Reactivity: 0C Position: 62 (position.label in template: 62.U) Reactivity: nanU Position: 63 (position.label in template: 63.A) Reactivity: 1A Position: 64 (position.label in template: 64.U) Reactivity: nanU Position: 65 (position.label in template: 65.C) Reactivity: 0.5C Position: 66 (position.label in template: 66.C) Reactivity: 1C Position: 67 (position.label in template: 67.G) Reactivity: nanG Position: 68 (position.label in template: 68.U) Reactivity: nanU Position: 69 (position.label in template: 69.A) Reactivity: 0.5A Position: 70 (position.label in template: 70.U) Reactivity: nanU Position: 71 (position.label in template: 71.C) Reactivity: 0C Position: 72 (position.label in template: 72.G) Reactivity: nanG Position: 73 (position.label in template: 73.C) Reactivity: 0C Position: 74 (position.label in template: 74.G) Reactivity: nanG Position: 75 (position.label in template: 75.A) Reactivity: 0.5A Position: 76 (position.label in template: 76.U) Reactivity: nanU Position: 77 (position.label in template: 77.G) Reactivity: nanG Position: 78 (position.label in template: 78.G) Reactivity: nanG Position: 79 (position.label in template: 79.A) Reactivity: 0.5A Position: 80 (position.label in template: 80.U) Reactivity: nanU Position: 81 (position.label in template: 81.C) Reactivity: 0C Position: 82 (position.label in template: 82.G) Reactivity: nanG Position: 83 (position.label in template: 83.U) Reactivity: nanU Position: 84 (position.label in template: 84.A) Reactivity: 0.5A Position: 85 (position.label in template: 85.G) Reactivity: nanG Position: 86 (position.label in template: 86.A) Reactivity: 1A Position: 87 (position.label in template: 87.G) Reactivity: nanG Position: 88 (position.label in template: 88.A) Reactivity: 1A Position: 89 (position.label in template: 89.G) Reactivity: nanG Position: 90 (position.label in template: 90.A) Reactivity: 1A Position: 91 (position.label in template: 91.U) Reactivity: nanU Position: 92 (position.label in template: 92.C) Reactivity: 0C Position: 93 (position.label in template: 93.C) Reactivity: 0C Position: 94 (position.label in template: 94.U) Reactivity: nanU Position: 95 (position.label in template: 95.G) Reactivity: nanG Position: 96 (position.label in template: 96.C) Reactivity: 0.5C Position: 97 (position.label in template: 97.G) Reactivity: nanG Position: 98 (position.label in template: 98.C) Reactivity: 0C Position: 99 (position.label in template: 99.G) Reactivity: nanG Position: 100 (position.label in template: 100.A) Reactivity: 0A Position: 101 (position.label in template: 101.U) Reactivity: nanU Position: 102 (position.label in template: 102.C) Reactivity: 0C Position: 103 (position.label in template: 103.A) Reactivity: 0A Position: 104 (position.label in template: 104.G) Reactivity: nanG Position: 105 (position.label in template: 105.C) Reactivity: 1C Position: 106 (position.label in template: 106.U) Reactivity: nanU Position: 107 (position.label in template: 107.C) Reactivity: 0.5C Position: 108 (position.label in template: 108.C) Reactivity: 0C Position: 109 (position.label in template: 109.G) Reactivity: nanG Position: 110 (position.label in template: 110.C) Reactivity: 0C Position: 111 (position.label in template: 111.G) Reactivity: nanG Position: 112 (position.label in template: 112.C) Reactivity: 0.5C Position: 113 (position.label in template: 113.U) Reactivity: nanU Position: 114 (position.label in template: 114.A) Reactivity: 0A Position: 115 (position.label in template: 115.U) Reactivity: nanU Position: 116 (position.label in template: 116.C) Reactivity: 1C Position: 117 (position.label in template: 117.C) Reactivity: 0.5C Position: 118 (position.label in template: 118.U) Reactivity: nanU Position: 119 (position.label in template: 119.G) Reactivity: nanG Position: 120 (position.label in template: 120.C) Reactivity: 1C Position: 121 (position.label in template: 121.G) Reactivity: nanG Position: 122 (position.label in template: 122.U) Reactivity: nanU Position: 123 (position.label in template: 123.G) Reactivity: nanG Position: 124 (position.label in template: 124.C) Reactivity: 0.5C Position: 125 (position.label in template: 125.C) Reactivity: 0C Position: 126 (position.label in template: 126.U) Reactivity: nanU Position: 127 (position.label in template: 127.C) Reactivity: 0.5C Position: 128 (position.label in template: 128.G) Reactivity: nanG Position: 129 (position.label in template: 129.G) Reactivity: nanG Position: 130 (position.label in template: 130.C) Reactivity: 0.5C Position: 131 (position.label in template: 131.U) Reactivity: nanU Position: 132 (position.label in template: 132.U) Reactivity: nanU Position: 133 (position.label in template: 133.U) Reactivity: nanU Position: 134 (position.label in template: 134.C) Reactivity: 0C Position: 135 (position.label in template: 135.G) Reactivity: nanG Position: 136 (position.label in template: 136.G) Reactivity: nanG Position: 137 (position.label in template: 137.U) Reactivity: nanU Position: 138 (position.label in template: 138.A) Reactivity: 0.5A Position: 139 (position.label in template: 139.A) Reactivity: 1A Position: 140 (position.label in template: 140.A) Reactivity: 1A Position: 141 (position.label in template: 141.U) Reactivity: nanU Position: 142 (position.label in template: 142.U) Reactivity: nanU Position: 143 (position.label in template: 143.G) Reactivity: nanG Position: 144 (position.label in template: 144.C) Reactivity: 0C Position: 145 (position.label in template: 145.G) Reactivity: nanG Position: 146 (position.label in template: 146.C) Reactivity: 0C Position: 147 (position.label in template: 147.A) Reactivity: 1A Position: 148 (position.label in template: 148.U) Reactivity: nanU Position: 149 (position.label in template: 149.U) Reactivity: nanU Position: 150 (position.label in template: 150.A) Reactivity: 0.5A Position: 151 (position.label in template: 151.U) Reactivity: nanU Position: 152 (position.label in template: 152.G) Reactivity: nanG Position: 153 (position.label in template: 153.U) Reactivity: nanU Position: 154 (position.label in template: 154.U) Reactivity: nanU Position: 155 (position.label in template: 155.C) Reactivity: 0C Position: 156 (position.label in template: 156.C) Reactivity: 0C Position: 157 (position.label in template: 157.C) Reactivity: 0C Position: 158 (position.label in template: 158.G) Reactivity: nanG Position: 159 (position.label in template: 159.A) Reactivity: 1A Position: 160 (position.label in template: 160.U) Reactivity: nanU Position: 161 (position.label in template: 161.G) Reactivity: nanG Position: 162 (position.label in template: 162.A) Reactivity: 0A Position: 163 (position.label in template: 163.U) Reactivity: nanU Position: 164 (position.label in template: 164.C) Reactivity: 0.5C Position: 165 (position.label in template: 165.A) Reactivity: 1A Position: 166 (position.label in template: 166.U) Reactivity: nanU Position: 167 (position.label in template: 167.C) Reactivity: 0C Position: 168 (position.label in template: 168.U) Reactivity: nanU Position: 169 (position.label in template: 169.C) Reactivity: 0C Position: 170 (position.label in template: 170.U) Reactivity: nanU Position: 171 (position.label in template: 171.G) Reactivity: nanG Position: 172 (position.label in template: 172.U) Reactivity: nanU Position: 173 (position.label in template: 173.U) Reactivity: nanU Position: 174 (position.label in template: 174.G) Reactivity: nanG Position: 175 (position.label in template: 175.A) Reactivity: nanA Position: 176 (position.label in template: 176.A) Reactivity: nanA Position: 177 (position.label in template: 177.G) Reactivity: nanG Position: 178 (position.label in template: 178.A) Reactivity: nanA Position: 179 (position.label in template: 179.A) Reactivity: nanA Position: 180 (position.label in template: 180.G) Reactivity: nanG Position: 181 (position.label in template: 181.U) Reactivity: nanU Position: 182 (position.label in template: 182.G) Reactivity: nanG Position: 183 (position.label in template: 183.C) Reactivity: nanC Position: 184 (position.label in template: 184.G) Reactivity: nanG Position: 185 (position.label in template: 185.U) Reactivity: nanU Position: 186 (position.label in template: 186.G) Reactivity: nanG Position: 187 (position.label in template: 187.C) Reactivity: nanC Position: 188 (position.label in template: 188.A) Reactivity: nanA Position: 189 (position.label in template: 189.C) Reactivity: nanC Position: 190 (position.label in template: 190.U) Reactivity: nanU Position: 191 (position.label in template: 191.G) Reactivity: nanG Position: 192 (position.label in template: 192.C) Reactivity: nanC Position: 193 (position.label in template: 193.G) Reactivity: nanG Position: 194 (position.label in template: 194.C) Reactivity: nanC Position: 195 (position.label in template: 195.A) Reactivity: nanA Position: 196 (position.label in template: 196.A) Reactivity: nanA Position: 197 (position.label in template: 197.A) Reactivity: nanA Position: 198 (position.label in template: 198.G) Reactivity: nanG Position: 199 (position.label in template: 199.A) Reactivity: nanA Position: 200 (position.label in template: 200.G) Reactivity: nanG Position: 201 (position.label in template: 201.A) Reactivity: nanA Position: 202 (position.label in template: 202.U) Reactivity: nanU Position: 203 (position.label in template: 203.C) Reactivity: nanC Position: 204 (position.label in template: 204.G) Reactivity: nanG Position: 205 (position.label in template: 205.A) Reactivity: nanA Position: 206 (position.label in template: 206.A) Reactivity: nanA Position: 207 (position.label in template: 207.A) Reactivity: nanA Position: 208 (position.label in template: 208.U) Reactivity: nanU Position: 209 (position.label in template: 209.C) Reactivity: nanC Position: 210 (position.label in template: 210.U) Reactivity: nanU Position: 211 (position.label in template: 211.3')3' 10 20 30 50 100 150 200


ptsH-ptsI-crr



Position: 1602-1771, Conformation: #0







Retained alignments:


   NC_002570.2       UU..C...C....U.A....C.C.U.A.....C.A.G.C.UA..C..C...G...A...AA.........................GAGC.U...U...AAUCCGUUCCUUGGuuucCGGGC.GAUUCGUCUG....U...GC.C.U.UG.A...AA.A.A.C.--..-..-..A.A.GAU..A..........................................................................................U.U....U...U.C....C.G..GA.C.C...CAA.C.U..C....C..G..UG....CC.UU..G...CUU....C.G.C...G....C....A....A.G......C...A...C....A..U...A..C..G...G...U...A...A.CU..U.A.A.AG..........G......UGAUGUUUCCAAUG...AU..CG..C...C...ACC...CU...UGA.........................................AGA...G.C.UU.....CGC...C..........................................................AA.G.C....-..-..-..A...A..A..A...G..C.G.....A.U.C.-.-.A.U
   NC_004578.1       GU..C...C....U.A....-.-.-.-.....-.-.C.U.UC..C..C...G...AucaAG.........................GAAG.A...C...AACCCGUUUCUCGG....CUGGC.GCGGUAUUCG....C...GU.C.A.CC.C...UC.G.A.C.CA..C..C..C.G.GAA..A..........................................................................................U.C....U...U.U....C.U..GG.U.U...CAG.A.C..C....C..G..CG....CC.AU..G...CUC....A.A.G...G....C....C....A.Gcg..aaG...G...C....C..U...G..-..A...A...C...A...A.CC..U.G.C.GC..........A......UUCUGUUGCCGAUG...AU..U-..-...-...---...--...---uccagca........................cccauga...---...-.-.--.....---...-agugg.............................................aagag...--.-.-....G..C..G..C...U..G.cA...C..C.U.....G.A.U.C.C.A.-
   NC_004603.1       AC..C...G....U.A....C.A.U.G.....G.A.U.C.UA..C..C...U...C...AA.........................GAGA.U...G...AACCCGUUCCUAGG....UUGGC.GUGCAGUACG....U...AU.C.A.GC.U...UG.G.A.U.CG..U..C..G.U.GAA..A..........................................................................................U.C....C...U.U....C.G..UG.A.U...CAA.C.U..A....C..G..UG....GC.AU..C...CUA....C.G.U...G....C....G....U.C......U...G...C....A..C...A..C..G...G...U...A...A.GC..U.A.C.GU..........A......UCAUGUUCCCAAUG...AU..CA..U...C...UCU...GU...UGA.........................................AGA...A.A.UC.....CGC...G.........................................................aGC.U.U....A..A..G..-...A..A..C...G..C.A.....A.U.C.G.A.A.G
   NC_004757.1       GC..G...C....A.G....C.G.C.C.....U.A.-.-.-C..C..G...C...A...CA.........................GCAC.C...C...AACCCGGCACUCGG....GCUGC.GCGCGAUCCG....C...C-.-.-.--.-...--.-.-.-.--..-..-..-.-.---..-ugagucuggccgaac.......................................................ccggcauguuucuggu....-.-....-...-.-....-.-..--.-.G...CAA.U.U..G....C..G..UG....CG.AU..C...CUG....C.G.C...G....C....U....U.C......C...G...U....U..C...U..G..G...G...C...A...A.AA..C.C.C.GG..........A......UUCUGAUUCCGAUG...C-..--..-...-...---...--...---ug.................................ugc...---...-.-.--.....---...-ag..................................................cag...--.-.-....C..C..G..G...G..A..A...G..U.C.....G.A.C.C.A.G.A
   NC_005126.1       GC..C...C....U.A....U.A.U.G.....A.A.U.C.UA..C..C...G...A...AA.........................GAAG.A...G...AAUCCAUUCCUUGG....UUGGC.GUGCAAUUCG....U...AU.U.-.UGcC...UU.G.A.U.CG..A..A..A.A.GAG..A..........................................................................................U.C....U...U.A....C.A..UU.C.U...CAG.U.U..A....C..G..UG....CU.AU..C...UUA....C.G.U...G....C....A....U.C......U...G...C....U..U...U..C..G...G...U...A...A.AU..U.A.C.GU..........A......UUAUGUUUCCAAUG...AU..UA..U...U...UCU...GU...AGA.........................................AGA...A.G.UA.....CAA...G..........................................................AG.C.U....-..-..G..A...A..A..G...U..A.G....aAcU.U.G.A.A.U
   NC_006055.1       AU..C...A....U.A....C.U.U.U.....G.A.A.U.UC..C..C...A...C...AU.........................GAAA.U...G...AACCCAUUCUUAGG....AUAUA.GAGCUGUUCG....U...UU.U.A.CA.U...UA.G.A.C.AG..A..A..A.A.GAU..A..........................................................................................U.U....U...U.U....A.A..AG.A.U...CAA.U.U..A....A..G..AG....CU.UU..A...UUA....A.G.A...G....C....U....A.G......U...G...C....U..C...A..U..G...G...U...G...A.AU..U.A.G.GA..........A......UUAUGUUCCCAAUG...AU..UG..C...A...ACU...GU...UGA.........................................UGA...A.U.UC....aAGC...G..........................................................--.-.-....U..G..C..U...A..A..A...G..C.A.....A.U.C.G.U.A.G
   NC_006177.1       GC..C...G....U.A....C.C.U.G.....G.G.C.C.UG..G..C...G...A...AG.........................GAGG.A...G...AACCCCUUCCUGG-....-GCGU.CCGG------....-...--.-.-.--.-...--.-.-.-.--..-..-..-.-.---..-gcccucaggcugugcuuccgc...........................................cgccccgagcucuuccagacgc....-.-....-...-.-....-.-..--.-.-...-AG.U.U..G....C..G..GG....CG.CU..G...CUU....C.G.G...G....C....G....U.C......G...G...U....C..C...A..U..G...G...C...C...G.GC..U.G.G.CC..........A......UCAUGUUCCCCAUG...GU..GA..G...C...GGC...-C...UG-a....................................g...---...C.G.AC.....CUG...C..........................................................GC.C.G....G..G..C..G...A..A..G...G..A.G.....G.C.C.C.U.G.G
   NC_006300.1       AC..C...U....U.A....U.A.U.G.....A.A.U.C.UG..C..C...A...A...AA.........................GAAA.U...G...AAUCCGUUCUUAGG....CUGGC.GUGCGGUUCG....U...AU.C.G.CA.U...UG.G.A.U.CG..U..C..G.C.GAA..A..........................................................................................U.C....U...U.A....A.A..UG.C.U...CAA.U.U..G....C..G..UG....CG.GU..A...UUA....C.G.U...G....C....U....U.C......C...G...C....A..U...U..C..G...G...U...A...A.AU..U.A.G.CG..........G......UAAUGUUCCCGAUG...AU..UA..U...U...UCC...GU...UGA.........................................AGA...A.A.UU.....CGC...G..........................................................AA.U.U....G..-..-..-...A..A..AuccG..U.U.....A.U.C.G.A.A.A
   NC_007292.1       AC..C...U....U.A....C.A.U.G.....C.A.C.C.UC..C..C...A...A...AC.........................GAAG.A...A...AAUCCAUUUCUUGG....AUGGC.GCGCAAUUCG....C...AU.U.A.UG.U...UA.G.A.C.AG..A..A..A.A.GAC..A..........................................................................................U.A....U...U.A....C.A..UA.C.U...CAA.U.U..A....C..G..CG....CU.AU..C...UUA....C.G.A...G....C....U....U.C......C...U...U....U..U...U..U..G...G...U...A...A.AU..U.G.C.GC..........A......UAAUGUAUCCUAUG...AU..UA..U...U...UCA...GU...AGA.........................................AGA...A.G.UA.....--A...A..........................................................AA.C.U....U..U..A..A...A..U..A...C..A.G.....A.A.U.U.A.A.A
   NC_007712.1       AC..C...C....U.A....U.A.U.G.....A.A.U.U.UG..C..C...A...A...AA.........................GAGG.A...C...AAUCCGUUCCUCGG....CUGGC.GCGCCAUCCG....C...AU.C.G.GG.C...UG.G.A.C.CG..U..A..A.A.GAA..A..........................................................................................U.G....C...U.G....C.A..CG.C.U...CAG.C.U..A....C..G..CG....CC.AU..C...CUG....C.G.C...G....C....C....U.C......G...G...C....G..U...U..C..G...G...C...A...A.AC..U.G.C.GC..........A......UUAUGUAUCCGAUG...AU..UA..U...U...UCG...GU...AGA.........................................AGA...A.G.UG.....CGU...A..........................................................CC.C.U....G.aA..G..C...A..G.gA...A..C.U.....G.U.C.G.C.U.G
   NC_007963.1       GC..C...G....U.A....C.U.G.G....cC.A.C.U.GC..C..C...C...A...-G.........................GAAG.A...C...AAUCCGUUCCUCGG....CUUGC.GCGGCAUUCG....U...C-.-.-.--.-...--.-.-.-.--..-..-..-.-.---..-uggccuugacgcguc.......................................................ccgaggugcucgagac....-.-....-...-.-....-.-..--.-.G...CAG.C.U..G....C..G..CG....CC.CU..G...CUG...aC.C.G...C....C....G....C.C......G...G...C....G..A...U..C..G...G...C...C...G.-C..U.G.C.GC..........A......UCAUGUUCCCGAUG...GU..CA..-...-...---...--...---aggacaucgcc...............gaguuccgcgcc...---...-.-.--.....---...-gcucgcgaga..................................ucuucgaccgc...--.-.-....G..U..G..C...A..G..-...-..-.-.....G.C.C.G.A.G.G
   NC_008609.1       CC..C...C....U.A....C.U.U.C.....C.C.C.U.GC..C..C...C...C...AU.........................GAGG.A...C...AACCCCUUCAUGGG....GCUGC.GCUCCAUCAG....G...CU.C.U.CC.C...UU.G.A.G.CA..C..C..G.U.GAA..A..........................................................................................U.U....C...U.G....C.A..CG.A.G...CAG.C.U..G....G..C..CG....CC.AU..C...AUG....A.U.G...G....C....G....G.C......G...G...A....U..G...C..C..G...G...C...A...A.GC..C.C.A.CG..........A......UCAUGUUCCCGCUG...AU..CU..C...C...GGU...GU...CGA.........................................CGA...G.A.UC.....CGC...G.........................................................aGA.U.C....C..G..-..-...G..A..A...G..A.U.....G.-.-.-.-.-.-
   NC_008709.1       AC..C...C....U.A....C.C.U.U.....A.A.U.U.UG..C..C...A...A...CA.........................GAAA.U...G...AAUCCUUUCUUAGG....AUGGC.GUGCAAUCCG....C...AU.C.U.GU.U...UC.G.A.U.CG..A..C..C.A.GAA..A..........................................................................................U.A....A...U.G....A.A..UC.C.U...CAA.U.U..A....C..G..UG....CU.UU..A...UUG....C.G.U...G....C....A....U.C......U...U...C....A..U...U..U..G...G...U...A...A.AA..U.U.C.GU..........A......UUAUGUUCCCGAUG...AU..AA..U...C...UCA...GU...UGA.........................................AGA...A.A.UU.....CGU...C..........................................................GA.C.U....A..-..A..A...A..G..A...G..A.U.....U.U.U.G.G.A.U
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   NZ_OU594967.1     CC..C...U....U.A....U.U.U.G.....A.A.C.C.UU..C..C...U...A...AA.........................GAGA.U...G...AAUCCAUUCUUGGG....CUGGC.GUGCUGUACG....U...AU.C.U.UC.U...UU.G.A.C.CG..U..C..C.A.GAA..A..........................................................................................U.C....A...U.G....C.A..UA.C.U...CAG.U.U..A....C..G..UG....CG.CU..A...CUU....C.G.G...G....C....C....U.C......A...G...C....A..U...U..C..G...G...U...A...A.AA..U.C.C.GG..........A......UUAUGUUCCCGAUG...AU..UA..U...U...GCU...GU...AGA.........................................AGA...G.A.UU.....CGC...U..........................................................UU.U.U....A..A..A..A...G..A..A...G..A.A.....A.U.U.G.A.A.A


   Structure         ((..(...............(.(.(.(.........(.(.((............................................))))............................((((.(((...............((.(.(.((......(.(.(.................................................................................................................).)....)..........).)..)).).).................)..)..))....)).)..............).).)...).......................)...)...)....(..(...(..(..(...(...(..........(..(.(.(.((..................................................(((....................................................)))...(.(.((......................................................................)).).)....)..)..)..)...)..).................).).).).).).)


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ptsH-ptsI-crr



Position: 1602-1771, Conformation: #0







97% 90% 75% 50% Nucleotide present N N N Nucleotide identify E < 0.1 Base-pair covariation E < 0.05 Helix-level covariation 97% 90% 75%

Y C U A Y U R Y Y U C C R A G A R R R A A Y C C U U Y Y U G G Y U C G Y G R U Y C G Y U R U C A R U C G Y G C U Y U Y G G C G Y Y Y G G R A Y U R R A U Y A U G U U Y C C R A U G R U Y R Y Y Y G R 5'