ptsH-ptsI-crr



Position: 1452-1571, Conformation: #0







DMS reactivity > 1.0 0.0 0.4 0.7 G/U/No data
Position: 0 (position.label in template: 0.5')5' Position: 1 (position.label in template: 1.C) Reactivity: nanC Position: 2 (position.label in template: 2.U) Reactivity: nanU Position: 3 (position.label in template: 3.G) Reactivity: nanG Position: 4 (position.label in template: 4.A) Reactivity: nanA Position: 5 (position.label in template: 5.A) Reactivity: nanA Position: 6 (position.label in template: 6.G) Reactivity: nanG Position: 7 (position.label in template: 7.G) Reactivity: nanG Position: 8 (position.label in template: 8.C) Reactivity: nanC Position: 9 (position.label in template: 9.G) Reactivity: nanG Position: 10 (position.label in template: 10.U) Reactivity: nanU Position: 11 (position.label in template: 11.U) Reactivity: nanU Position: 12 (position.label in template: 12.G) Reactivity: nanG Position: 13 (position.label in template: 13.G) Reactivity: nanG Position: 14 (position.label in template: 14.U) Reactivity: nanU Position: 15 (position.label in template: 15.C) Reactivity: nanC Position: 16 (position.label in template: 16.U) Reactivity: nanU Position: 17 (position.label in template: 17.G) Reactivity: nanG Position: 18 (position.label in template: 18.U) Reactivity: nanU Position: 19 (position.label in template: 19.A) Reactivity: nanA Position: 20 (position.label in template: 20.U) Reactivity: nanU Position: 21 (position.label in template: 21.C) Reactivity: nanC Position: 22 (position.label in template: 22.G) Reactivity: nanG Position: 23 (position.label in template: 23.U) Reactivity: nanU Position: 24 (position.label in template: 24.A) Reactivity: nanA Position: 25 (position.label in template: 25.C) Reactivity: nanC Position: 26 (position.label in template: 26.U) Reactivity: nanU Position: 27 (position.label in template: 27.G) Reactivity: nanG Position: 28 (position.label in template: 28.A) Reactivity: nanA Position: 29 (position.label in template: 29.G) Reactivity: nanG Position: 30 (position.label in template: 30.U) Reactivity: nanU Position: 31 (position.label in template: 31.U) Reactivity: nanU Position: 32 (position.label in template: 32.C) Reactivity: nanC Position: 33 (position.label in template: 33.C) Reactivity: 0.5C Position: 34 (position.label in template: 34.U) Reactivity: nanU Position: 35 (position.label in template: 35.G) Reactivity: nanG Position: 36 (position.label in template: 36.U) Reactivity: nanU Position: 37 (position.label in template: 37.U) Reactivity: nanU Position: 38 (position.label in template: 38.C) Reactivity: 0.5C Position: 39 (position.label in template: 39.A) Reactivity: 0A Position: 40 (position.label in template: 40.U) Reactivity: nanU Position: 41 (position.label in template: 41.G) Reactivity: nanG Position: 42 (position.label in template: 42.G) Reactivity: nanG Position: 43 (position.label in template: 43.A) Reactivity: 0A Position: 44 (position.label in template: 44.C) Reactivity: 0.5C Position: 45 (position.label in template: 45.C) Reactivity: 0.5C Position: 46 (position.label in template: 46.G) Reactivity: nanG Position: 47 (position.label in template: 47.C) Reactivity: 0C Position: 48 (position.label in template: 48.G) Reactivity: nanG Position: 49 (position.label in template: 49.A) Reactivity: 0.5A Position: 50 (position.label in template: 50.C) Reactivity: 0.5C Position: 51 (position.label in template: 51.G) Reactivity: nanG Position: 52 (position.label in template: 52.C) Reactivity: 0C Position: 53 (position.label in template: 53.A) Reactivity: 0.5A Position: 54 (position.label in template: 54.C) Reactivity: 0.5C Position: 55 (position.label in template: 55.U) Reactivity: nanU Position: 56 (position.label in template: 56.G) Reactivity: nanG Position: 57 (position.label in template: 57.C) Reactivity: 0.5C Position: 58 (position.label in template: 58.C) Reactivity: 0C Position: 59 (position.label in template: 59.C) Reactivity: 0C Position: 60 (position.label in template: 60.A) Reactivity: 0A Position: 61 (position.label in template: 61.C) Reactivity: 0C Position: 62 (position.label in template: 62.U) Reactivity: nanU Position: 63 (position.label in template: 63.G) Reactivity: nanG Position: 64 (position.label in template: 64.A) Reactivity: 1A Position: 65 (position.label in template: 65.A) Reactivity: 0A Position: 66 (position.label in template: 66.G) Reactivity: nanG Position: 67 (position.label in template: 67.A) Reactivity: 0.5A Position: 68 (position.label in template: 68.A) Reactivity: 1A Position: 69 (position.label in template: 69.G) Reactivity: nanG Position: 70 (position.label in template: 70.A) Reactivity: 0.5A Position: 71 (position.label in template: 71.A) Reactivity: 0A Position: 72 (position.label in template: 72.C) Reactivity: 0C Position: 73 (position.label in template: 73.A) Reactivity: 0.5A Position: 74 (position.label in template: 74.G) Reactivity: nanG Position: 75 (position.label in template: 75.U) Reactivity: nanU Position: 76 (position.label in template: 76.U) Reactivity: nanU Position: 77 (position.label in template: 77.U) Reactivity: nanU Position: 78 (position.label in template: 78.G) Reactivity: nanG Position: 79 (position.label in template: 79.C) Reactivity: 0C Position: 80 (position.label in template: 80.U) Reactivity: nanU Position: 81 (position.label in template: 81.G) Reactivity: nanG Position: 82 (position.label in template: 82.C) Reactivity: 0C Position: 83 (position.label in template: 83.U) Reactivity: nanU Position: 84 (position.label in template: 84.U) Reactivity: nanU Position: 85 (position.label in template: 85.A) Reactivity: 1A Position: 86 (position.label in template: 86.C) Reactivity: 1C Position: 87 (position.label in template: 87.A) Reactivity: 0A Position: 88 (position.label in template: 88.A) Reactivity: 0A Position: 89 (position.label in template: 89.A) Reactivity: 0A Position: 90 (position.label in template: 90.G) Reactivity: nanG Position: 91 (position.label in template: 91.C) Reactivity: 0C Position: 92 (position.label in template: 92.A) Reactivity: 0A Position: 93 (position.label in template: 93.G) Reactivity: nanG Position: 94 (position.label in template: 94.U) Reactivity: nanU Position: 95 (position.label in template: 95.G) Reactivity: nanG Position: 96 (position.label in template: 96.G) Reactivity: nanG Position: 97 (position.label in template: 97.C) Reactivity: 0C Position: 98 (position.label in template: 98.U) Reactivity: nanU Position: 99 (position.label in template: 99.G) Reactivity: nanG Position: 100 (position.label in template: 100.A) Reactivity: 0.5A Position: 101 (position.label in template: 101.A) Reactivity: 1A Position: 102 (position.label in template: 102.G) Reactivity: nanG Position: 103 (position.label in template: 103.C) Reactivity: 0.5C Position: 104 (position.label in template: 104.G) Reactivity: nanG Position: 105 (position.label in template: 105.U) Reactivity: nanU Position: 106 (position.label in template: 106.G) Reactivity: nanG Position: 107 (position.label in template: 107.U) Reactivity: nanU Position: 108 (position.label in template: 108.G) Reactivity: nanG Position: 109 (position.label in template: 109.G) Reactivity: nanG Position: 110 (position.label in template: 110.C) Reactivity: 0C Position: 111 (position.label in template: 111.U) Reactivity: nanU Position: 112 (position.label in template: 112.C) Reactivity: 0C Position: 113 (position.label in template: 113.G) Reactivity: nanG Position: 114 (position.label in template: 114.C) Reactivity: 0C Position: 115 (position.label in template: 115.A) Reactivity: 1A Position: 116 (position.label in template: 116.A) Reactivity: 0.5A Position: 117 (position.label in template: 117.G) Reactivity: nanG Position: 118 (position.label in template: 118.C) Reactivity: 0C Position: 119 (position.label in template: 119.G) Reactivity: nanG Position: 120 (position.label in template: 120.G) Reactivity: nanG Position: 121 (position.label in template: 121.U) Reactivity: nanU Position: 122 (position.label in template: 122.U) Reactivity: nanU Position: 123 (position.label in template: 123.A) Reactivity: 0A Position: 124 (position.label in template: 124.U) Reactivity: nanU Position: 125 (position.label in template: 125.C) Reactivity: 1C Position: 126 (position.label in template: 126.G) Reactivity: nanG Position: 127 (position.label in template: 127.U) Reactivity: nanU Position: 128 (position.label in template: 128.U) Reactivity: nanU Position: 129 (position.label in template: 129.C) Reactivity: nanC Position: 130 (position.label in template: 130.G) Reactivity: nanG Position: 131 (position.label in template: 131.U) Reactivity: nanU Position: 132 (position.label in template: 132.A) Reactivity: nanA Position: 133 (position.label in template: 133.C) Reactivity: nanC Position: 134 (position.label in template: 134.C) Reactivity: nanC Position: 135 (position.label in template: 135.A) Reactivity: nanA Position: 136 (position.label in template: 136.U) Reactivity: nanU Position: 137 (position.label in template: 137.G) Reactivity: nanG Position: 138 (position.label in template: 138.G) Reactivity: nanG Position: 139 (position.label in template: 139.A) Reactivity: nanA Position: 140 (position.label in template: 140.C) Reactivity: nanC Position: 141 (position.label in template: 141.A) Reactivity: nanA Position: 142 (position.label in template: 142.U) Reactivity: nanU Position: 143 (position.label in template: 143.C) Reactivity: nanC Position: 144 (position.label in template: 144.G) Reactivity: nanG Position: 145 (position.label in template: 145.G) Reactivity: nanG Position: 146 (position.label in template: 146.C) Reactivity: nanC Position: 147 (position.label in template: 147.G) Reactivity: nanG Position: 148 (position.label in template: 148.G) Reactivity: nanG Position: 149 (position.label in template: 149.C) Reactivity: nanC Position: 150 (position.label in template: 150.G) Reactivity: nanG Position: 151 (position.label in template: 151.A) Reactivity: nanA Position: 152 (position.label in template: 152.C) Reactivity: nanC Position: 153 (position.label in template: 153.A) Reactivity: nanA Position: 154 (position.label in template: 154.A) Reactivity: nanA Position: 155 (position.label in template: 155.A) Reactivity: nanA Position: 156 (position.label in template: 156.G) Reactivity: nanG Position: 157 (position.label in template: 157.A) Reactivity: nanA Position: 158 (position.label in template: 158.G) Reactivity: nanG Position: 159 (position.label in template: 159.C) Reactivity: nanC Position: 160 (position.label in template: 160.U) Reactivity: nanU Position: 161 (position.label in template: 161.3')3' 10 20 30 50 100 150


ptsH-ptsI-crr



Position: 1452-1571, Conformation: #0







Retained alignments:


   NC_002570.2       CCUUUAC.CGA...ACAGA.G......U...U.U....U....U.AU.A....U..A..U.G.....G...A...U...C..G..C.....G..A....U....-.C....A.gC...U...U..C..C.G..A..C....G..G...A...A.G...A....G.G...AGC..AA.U.U...U...G.A....A....GC.A...UA...C...A...A.......................................................................G.G...A...-.-..-.....A.G.U..U..G.....U..A.....C...A...G..C......GaaU..G...G.A..C..G......G..A...A.A.......G..C...cU....G.U....U.G.U.C.A....UU.C.G.CA.C.C.C...U.A...GAUA.UU.GGGG.....G..A.GA.UA.A...G..GA
   NC_004578.1       CCUGUAU.CGC...ACCGA.A......G...U.G....C....C.GU.U....C..A..U.G.....A...U...C...A..A..C.....C..A....G....C.G....U..U...U...C..C..C.G..A..G....U..G...A...A.A...A....G.G...AAC..AG.C.U...G...G.C....G....AU.C...UA...C...C...-g..................................................................c...G.A...-...-.G..C.....A.A.C..U..G.....G..C.....G...G...C..C......U..U..C...C.A..U..C......C..G...C.U.......G..C....C....G.G....UgA.C.C.A....UG.C.G.CA.G.C.C...U.G...GACA.UC.GGCG.....G..C.GA.CA.A...G..UC
   NC_004603.1       UCUGUAC.CGU...ACUGA.A......U...U.C....C....U.AU.U....U..A..U.G.....G...A...C...C..G..U.....A..C....U....G.C....G..C...U...A..C..C.A..A..C....U..G...A...A.G...A....A.G...AAC..AG.U.A...C...C.A....A....GC.G...UA...C...A...A.......................................................................A.G...A...A.G..U.....U.G.C..A..G.....A..A.....G...C...A..A......-..-..U...G.A..A..C......GguC...A.A.......G..C....U....G.U....G.A.U.C.A....UC.C.G.UA.C.U.A...U.G...GAUA.UC.GGCG.....G..C.GA.UA.A...A..GA
   NC_005126.1       UUUAUAC.CGU...ACAGA.A......U...U.U....C....U.GU.U....U..A..U.G.....G...A...U...C..G..U.....G..A....U....G.C....A..C...U...G..C..C.A..A..C....A..G...A...A.G...A....A.G...AAC..AA.U.U...C...C.A....A....GC.U...UA...U...A...A.......................................................................A.G...C...C.G..U.....G.G.C..C..G.....A..A.....G...C...A..A......U..A..G...G.C..A..G......C..C...A.A.......G..C....G....G.U....U.A.U.U.A....UA.C.G.UA.C.G.A...U.G...GAUA.UC.GGUG.....G..U.GA.UA.A...A..AA
   NC_005966.1       UUUAUAU.CGU...AGUGA.A......A...U.C....C....C.GU.U....U..A..U.G.....U...U...A...C..G..C.....G..A....C....C.G....C..U...U...U..C..C.U..G..G....C..G...A...A.G...A....G.G...AAC..AG.C.G...U...G.C....C....AU.G...U-...-...-...-auc..............................................................gcc...-.-...-...A.G..C.....A.A.C..U..G.....A..G.....U...C...A..C......U..U..U...G.C..C..A......A..C...A.A.......A..C....C....U.G...uC.A.C.C.A....UG.C.G.UA.C.C.C...U.C...GAUA.UU.GGUG.....C..C.GA.UA.A...A..GA
   NC_006055.1       AUUAUUC.CGU...UCAGA.A......U...U.C....U....U.AU.A....C..A..U.G.....G...A...C...A..A..U.....G..A....C....-.C....A..C...U...U..C..C.C..A..A...cU..G...A...A.G...A....A.G...AAC..AA.U.A...U...A.U....A....GC.U...UA...C...A...A....................................................................acaA.G...U...U.A..U.....G.G.A..U..G.....C..A.....A...U...G..A......A..A..G...G.U..A..A......A..U...U.A.......G..U....U....G.U....U.A.-.-.-....UC.C.G.UA.C.A.U...U.A...GAUA.UC.GGUG.....G..A.GA.UA.A...A..AA
   NC_006177.1       CCUCCUC.CGC...UCCGA.G......U...U.C....C....U.CU.U....C..A..U.G.....G...G...G...C..-..-.....G..U....U....C.C....A..C...C...GccC..C.C..A..C....G..G...A...G.G...A....G.G...AGC..AG.U.A...U...C.A....G....GC.C...UA...-...-...-cgc..............................................................cga...G.G...C...U.-..C.....U.G.C..G..G.....A..A....cG...C...C..C......G..C..G...G.G..C..A......G..C...G.G.......G..U....-....-.-....G.A.U.C.A....UC.C.G.CA.C.C.C...U.G...GAUA.UC.GGCG.....G..U.GA.CA.A...G..GA
   NC_006300.1       UUUAUAC.CGU...ACCGA.G......U...U.C....C....U.GU.U....C..A..U.G.....G...A...U...C..G..U.....G..A....C....C.A....A..C...U...G..C..C.U..U..C....A..G...A...A.G...A....A.G...AAC..AA.U.U...U...A.U....C....GC.U...UA...U...A...A.......................................................................A.G...A...A.G..U.....G.G.U..A..G.....A..A.....G...C...-..-......G..A..U...G.A..A..C......G..G...U.C.......G..Cc..aG....G.U....G.G.U.A.U....UA.C.G.UA.C.C.A...U.G...GAUA.UU.GGUG.....G..U.GA.UA.A...A..GA
   NC_006510.1       AUUGUAU.CGC...ACGGA.A......U...U.U....U....U.AU.A....C..A..U.G.....G...G...A...C..GauC.....G..G....A....G.C....-..-...U...G..C..C.U..A..C....G..G...A...A.G...A....C.G...AAC..AG.U.U...U...G.C....G....GC.U...UA...C...A...A.......................................................................A.A...C...G.G..U.....G.C.U..U..G.....A..A.....-...C...A..A......A..U..G...G.G..C..G......G..C...A.A.......G.cC....G....G.U....C.G.U.C.G....UC.C.G.GA.C.G.C...U.U...GACA.UU.GGCG.....G..C.GA.CA.A...A..GA
   NC_006513.1       CCUGUAC.CGC...ACCGA.G......U...U.C....C....U.GU.U....C..A..U.C.....G...G...C...C..G..C.....G..A....C....G.C....G..C...U...G..C..C.C..G..A....C..G...A...G.G...A....G.G...AAC..AG.U.A...C...G.A....A....GC.C...UA...U...C...G.......................................................................C.G...C...A.G..-.....U.G.C..U..G.....A..A.....A...U...C..G......A..U..G...C.C..C..G......G..C...A.A.......G..C...cG....G.U....G.A.C.G.A....UC.C.G.CA.C.U.U...U.C...GAUG.UC.GGC-.....G..C.GG.AC.A...A..GG
   NC_007292.1       AUUAUAU.AGA...ACUGA.A......U...U.U....U....U.AU.U....U..A..U.G.....A...A...U...C..G..U.....A..A....U....U.C....A..U...U...C..C..C.C..A..C....A..G...A...A.G...A....A.G...AAC..AA.U.U...U...A.A....A....GC.U...UA...U...A...A.......................................................................A.A...A...U.G..C.....C.G.C..U..G.....A..A.....U...C..cA..U......G..A..U...U.A..A..C......G..A...-.A.......U..C....U....G.U....A.G.U.C.A....UA.C.G.UA.U.U.A...U.G...GAUA.UU.GGGG.....G..U.GA.UA.A...A..AA
   NC_007498.2       ACUUUAU.CGU...ACCGA.A......U...U.C....C....C.CU.A....U..A..U.G.....A...U...C...C..G..C.....C..C....C....G.A....C..U...U...U..C..C.C..A..Gc.cgA..G...A...C.G...A....A.C...AAU..-A.C.C...A...G.C....U....CU.A...UU...C...A...A.......................................................................-.-...G...G.G..U.....G.G.U..A..A.....A..G.....G...A...A..U......U..C..A...A.C..G..G......U..C...U.G.......C..C....G....G.U....G.A.C.C.A....UC.C.G.CA.C.C.C...U.C...GAUA.UC.GGCG.....G..C.GA.CA.A...G..GC
   NC_007510.1       GCUGUUC.CGU...UCCGA.G......U...U.C....C....U.GU.U....C..A..U.G.....C...A...U...C..A..G.....A..A....G....G.A....G..A...U...G..C..C.G..G..A....A..G...A...G.G...A....G.G...AGC..AG.U.U...C...G.C....C....GC.G...UA...C...A...A.......................................................................-.G...C...G.-..-.....G.G.C..U..G.....U..C.....G...A...G..Ug....g-..A..U...GaA..G..G......G..C...A.U......gC..C....G....G.U....G.A.C.G.A....UC.C.G.CA.C.G.A...U.C...GACG.UC.GGC-.....G..C.GG.AC.A...A..GC
   NC_007519.1       GCUGUUC.CGC...ACGGA.G......U...U.C....C....U.CU.U....U..C..U.C.....G...A...C...A..G..G.....C..C....U....U.C....C..G...C...U..C..C.U..A..C....A..G...A...A.G...A....C.G...AAC..AG.A.C...G...G.C....C....GC.G...UA...U...A...C.......................................................................U.G...A...A.G..C.....U.G.C..U..C.....A..G.....G...C...U..Cu....uG..A..C...G.G..C..C......G..G...-.-.......C..C....G....G.U....U.A.U.U.A....UC.C.G.CA.C.G.C...U.G...GAUA.UC.GGGG.....G..C.GA.CA.-...A..GC
   NC_007645.1       UCUGUAU.CGC...UCGGA.A......A...U.U....C....C.AU.U....U..A..U.G.....G...U...G...C..A..C.....G..A....G....U.C....C..U...U...C..C..C.G..U..C....G..G...A...A.G...A....A.G...AGC..AG.-.-...-...-.-....-....--.-...--...-...-...-gugcagaucua..............................................ucgcaaagugc...-.-...-...-.-..-.....-.-.U..G..G.....A..A.....G...C...C..U......A..U..G...C.G..C..C......G..A...G.Ac....ccG..U....G....U.A....C.A.-.-.-....UG.C.G.CA.C.C.C...U.G...GAUA.UC.GGCG.....G..C.GA.UA.A...A..AA
   NC_007712.1       CUUGUAU.CGC...ACCGA.G......U...U.U....C....U.GU.U....U..A..U.G.....A...A...C...C..G..C.....G..A....U....U.C....C..C...U...G..C..C.G..G..G....C..G...A...A.G...A....A.G...AGC..AA.U.U...U...C.A....G....GC.U...UA...C...A...A.......................................................................A.G...C...G.G..U.....G.G.C..G..G.....A..A.....-...-...-..U......C..C.aU...G.C..C..C......A..C...C.G.......GcuC....U....A.U....U.A.U.C.G....UG.C.G.CA.C.C.A...U.G...GAUA.UC.GGCG.....G..C.GA.CA.A...A..GA
   NC_007912.1       GUUGUAU.CGC...ACCGA.A......G...U.G....C....C.UU.U....U..A.uG.U.....U...G...C...G..C..G.....A..U....C....G.C....U..U...U...-..C..C.C..A..G....U..G...A...G.G...A....A.G...AGC..AG.C.-...-...G.C....U....UG.G...UG...U...A...C.......................................................................CgC...G...A.G..C.....A.G.C..U.aG.....A..A.....G...C...G..U......U..U..G...C.G..C..C......G..C...A.C.......C..C....A....G.U....A.A.C.C.A....UG.C.G.UA.C.A.C...U.C...GAUG.UG.GGCG.....G..U.GA.UA.A...A..UC
   NC_008010.2       CCUCUAC.CGC...ACCGA.G......U...U.C....C....U.GU.A....U..C..U.G.....G...G...C...C..G..U.....G..A....C....A.C....C..U...U...G..C..C.G..A..G....U..G...A...G.G...A....G.G...AAC..AG.U.A...C...G.G....C....GC.C...UA...C...-...-.......................................................................C.G...C...A.C..C....gU.G.C..U..G.....G..A.....G...G...G..G......A..U..G...G.C..G..G......G..C...C.G......cC..C....G....G.U....G.G.U.G.A....UC.C.G.CA.C.G.C...U.G...GACG.UG.GGCG.....G..U.GA.CA.A...A..GC
   NC_008025.1       GCUGAUG.CGC...ACCGA.G......U...U.C....C....U.CU.U....U..C..U.G.....G...A...G...C..G..G.....G..A....C....A.C....G..G...U...G..C..C.C..A..G....C..G...A...G.G...A....U.G...A--..--.-.-...-...-.-....-....--.-...--...-...-...-gcaggaacgcgaguacc..................................gggccauggcccaggcg...-.-...-...-.-..-.....-.-.-..-..-.....-..-.....-...-...-..-......C..U..G...G.C..G..G......G..C..cG.U.......C..C....C....C.U....G.A.U.C.A....UC.C.G.CA.C.G.C...U.G...GACA.UC.GGCG.....G..C.GA.CA.A...G..GA
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   NZ_LT906444.1     ACUUUAU.CGU...ACAGA.A......U...U.C....U....U.GU.A....C..A..U.G.....G...G...U...C..G..U.....G..A....C....A.-....A..U...U...U..C..C.C..A..A...cA..G...A...A.G...A....A.G...AGC..AA.U.U...C...G.A....A....GC.G...UA...U...A...A.......................................................................A.G...C...A.G..U.....A.G.U..U..U.....C..C.....G...G...A..A......-..U..G...G.A..C..G.....gA..A...A.A.......U..C....U....G.U....G.G.U.C.G....UU.C.G.UA.C.U.U...U.A...GAUA.UC.GGUG.....G..C.GA.UA.A...A..AC
   NZ_LT906445.1     UUUGUAC.CGU...ACAGA.A......U...U.C....C....U.UU.A....C..A..U.G.....G...A...A...A..A..C.....G..A....U....G.A....A..U...U...A..C..C.U..G..C....A..G...A...A.G...A....U.G...UAC..--.-.-...-...-.-....-....--.-...--...-...-...-aauuugaagaguaua.....................................aaaagguagcccaaga...-.-...-...-.-..-.....-.-.-..-..G.....A..U.....G...A...A..A......G..-..-...G.G..C..A......A..C...C.G.......G..-....-....-.U....U.A.U.C.A....UC.C.G.UA.C.C.A...U.G...GAUA.UC.GGUG.....G..C.GA.CA.A...G..GA
   NZ_LT906446.1     UCUGUUC.CGU...UCUGA.A......U...U.C....U....U.AU.U....C..A..U.G.....G...G...U...A..G..A.....G..A....U....A.C....U..A...U...U..C..C.U..G..A....U..G...A...A.G...A....A.A...CUC..AA.U.U...U...A.A....A....GC.A...UA...U...A...A.......................................................................A.G...A...A.G..C.....U.A.U..U..G.....A..A.....A...A...A..U......G..C..A...-.A..U..G......G..U...A.A.......U..U....U....A.U...gU.G.U.U.A....UU.C.G.UA.C.U.A...U.G...GAUA.UC.GGCG.....G..C.GA.UA.A...A..CC
   NZ_LT906447.1     UUUAUAC.AGA...ACUGA.A......U...U.C....U....U.AU.A....C..A..U.G.....G...G...C...A..G..A.....G..A....C....C.A....A..A...U...G..C..C.G..A..C....U..G...A...A.G...A....A.G...AAC..AG.U.U...C...G.A....A....GC.C...UA...U...A...A.......................................................................A.A...C...A.G..U.....A.U.U..A..G.....A..A.....U...C...C..A......-..U..G...G.A..A..G......G..C...A.A.......A..C...gU....G.U....A.G.U.A.G....UA.C.G.UA.C.U.U...U.A...GAUA.UU.GGCG.....G..C.GA.CA.A...A..GA
   NZ_LT906448.1     CUUAUAC.CGU...ACUGA.A......U...U.C....C....U.CU.U....U..A..U.G.....G...A...U...C..G..U.....G..A....G....C.A....A..C...U...U..C..C.A..A..C....G..G...A...A.G...A....A.G...AAC..AG.U.U...U...A.U....U....GC.U...UA...U...A...A.......................................................................A.G...A...A.G..U.....U.G.U..U..G.....A..A.....G...C...A..Aug..aa-..-..U...G.G..U..C......G..C...-.-.......U..U....A....G.U....A.G.U.A.U....UA.C.G.UA.C.A.A...U.G...GAUA.UU.GGUG.....G..U.GA.UA.A...A..GA
   NZ_LT906451.1     GCUCUAC.CGC...UCGGA.A......G...U.G....C....C.CU.U....U..A..U.G.....A...G...U...C..G..A.....G..A....U....A.G....A..U...U...U..C..C.C..U..C....C..G...A...A.G...A....U.G...AGC..AA.U.A...U...A.U....U....AU.U...UA...U...-...-c.................................................................gc...-.-...C...A.A..A.....U.A.U..U..G.....A..A.....G...G...C..C......U..U..U...G.C..U..C......C..U..cG.U.......U..U....G....G.U....C.A.C.C.A....UG.C.G.UA.C.C.U...U.A...GACA.UU.GGUG.....G..A.GA.UA.A...A..AU
   NZ_LT906460.1     UUUAUAU.AGA...ACUGA.G......U...U.C....U....U.AU.A....U..A..U.G.....G...G...U...A..G..A.....G..A....C....C.A....A..A...U...G..C..C.A..A..C....U..G...A...A.G...A....G.G...AAC..AA.U.U...U...G.A....A....GC.C...UA...U...A...A.......................................................................A.G...A...A.G..U.....A.C.U..U..G.....A..A.....G...C...A..A......-..-..U...G.A..A..C......G..Gu.aA.A.......C..G....U....G.U....U.G.U.U.G....UG.C.G.UA.C.U.U...U.G...GAUA.UA.GGUG.....G..A.GA.UA.A...A..GA
   NZ_LT906463.1     CCUCUAU.CGU...ACGGA.A......U...U.C....C....U.AU.U....U..A..U.G.....G...A...U...C..G..U.....G..A....U....C.A....G..U...U...A..C..C.G..A..G....C..G...A...A.G...A....A.G...AAC..AG.U.U...U...A.U....U....GC.U...UA...C...A...A.......................................................................A.G...A...A.G..U.....G.G.U..A..G.....A..G.....G...C...A..A......U..G..A...A.U..G..G......U..C...G.U.......U..U....G....G.U....G.G.U.A.U....UG.C.G.UA.C.C.A...U.G...GAUA.UC.GGUG.....G..A.GA.CA.A...G..GA
   NZ_LT906464.1     CCUAUAC.CGU...ACAGA.A......U...U.C....U....U.GU.A....C..A..U.G.....G...G...U...C..G..U.....G..A....C....A.A....C..A...U...G..C..C.A..U..C....A..G...A...A.G...A....U.G...AAC..AA.U.U...C...G.A....A....GC.A...UA...C...A...A....................................................................aaaG.G...U...A.U..U.....A.G.A..A..G.....A..A.....A...U...G..-......G..A..U...G.-..-..-......G..U...A.A.......G..C....G...uG.U....C.G.U.U.G....UU.C.G.UA.CgC.U...U.G...-AUA.UC.GGUG.....G..A.GA.UA.A...A..GA
   NZ_LT906479.1     CCUGUAU.CGU...ACCGA.A......U...U.C....C....U.GU.U....C..A..U.G.....G...A...C...C..G..C.....G..A....C....U.C....G..C...U...G..C..C.G..A..C....C..G...A...A.G...A....C.G...AGC..AG.U.U...C...C.A....G....GC.U...UA...C...A...A.......................................................................A.G...C...C.G..U.....U.G.C..G..G.....A..A.....G...C...C..A......U..G..G...G.C..U..C......G..C...A.G.......G..C....C....G.U....G.A.U.C.G....UC.C.G.UA.C.C.A...U.G...GACA.UC.GGCG.....G..C.GA.CA.A...A..GA
   NZ_LT985188.1     GCUGUUC.CGG...UCCGA.A......U...U.C....C....U.GU.U....U..C..U.C.....G...A...U...C..G..C.....G..A....C....A.C....C..G...C...G..C..C.G..A..C....C..G...U...C.G...A....C.G...AGC..AG.A.C...C...G.C....C....AC.C...UA...C...A...C.......................................................................C.G...A...G.G..U.....G.C.U..C..A.....A..G.....G...C...G..Uu....cG..G..C...G.A..U..C......G..C...A.A.......-..-....G....G.U....C.G.U.U.G....UA.C.G.UA.C.C.C...U.C...GACG.CC.GGGG.....C..C.GA.CA.A...G..CC
   NZ_LT996885.1     UCUUUUC.CGC...AGUGA.A......U...U.C....A....U.UU.A....C..A..U.G.....G...G...A...A..G..A.....G..A....U....A.C....C..C...U...U..C..C.A..A..G....C..G...A...A.G...A....A.G...AAC..AG.U.U...C...A.A....C....AU.U...UA...C...A...A.......................................................................A.C...U...U.G..C.....U.G.U..U..G.....A..A.....A...C...G..A......-..U..G...A.C..U..G......G..U...A.A.......G..C....G...cG.U....C.A.U.C.A....UC.C.G.UA.C.C.C...U.U...GAUA.UC.GGCG.....G..C.GA.CA.A...A..GA
   NZ_OU015521.1     AUUAUAC.CGU...ACUGA.A......A...U.G....A....C.UU.U....U..A..U.G.....A...U...C...C..G..A.....G..A....U....C.G....A..U...U...U..C..C.C..A..G....U..G...A...A.G...A....A.G...AAC..AG.C.G...U...A.U....U....AU.G...UA...U...C...-.......................................................................G.A...C...A.A..C.....U.A.C..U..A.....A..A.....U..aC...G..U......U..U..G...C.U..C..C......U..C...G.A.......C..C....G....G.U....C.A.U.U.A....UG.C.G.UA.C.A.U...U.A...GAUA.UU.GGGG.....G..U.GA.UA.A...A..AU
   NZ_OU594967.1     CCUAUAC.CGG...ACAGA.G......U...U.C....U....U.AU.U....C..A..U.G.....G...A...C...C..G..U.....G..A....G....A.G....U..C...U...G..C..C.A..A..C....U..G...A...A.G...A....U.G...AAC..AG.U.U...C...C.A....G....GC.C...UA...U...A...A.......................................................................A.G...A...U.G..U.....C.G.C..U..G.....A..A....aG...U...A..U......G..C..-...-.C..U..A.....aU..C...A.C.......C..C....A....A.U....C.A.U.U.A....UU.C.G.UA.C.G.A...U.G...GAUA.UU.GGUG.....G..U.GA.UA.A...A..GA
   NZ_OU907312.1     UCUCUAC.CGU...ACCGA.A......U...U.U....C....U.CU.U....C..A..U.G.....G...G...A...C..G..A.....G..A....G....G.G....U..C...U...C..C..C.C..U..C....C..G...A...A.G...C....A.G...AG-..--.-.-...-...-.-....-....--.-...--...-...-...-caauuccaggccuaucaagc...........................cguagcacaacaacugcgauc...-.-...-...-.-..-.....-.-.-..-..-.....-..-.....-...-...-..A......G..G..G...G.A..-..-......-..-...-.G.......G..C....G....G.C....G.G.U.G.A....UC.C.G.CA.C.C.G...U.C...GAUA.UU.GGGG.....G..U.GA.UA.A...A..CC


   Structure         (((...(.(((....((((........................(.((.(....(..(..(.(.....(...(...(...(..(..(..................(.(.....................(.(..(..(..................................(..((.(.(.......(.(....(....((.(........................................................................................).)...)...).)..).....).).)..)..)................................)..)..)...)..............)..).............)..)....)....).)...........................).).)...).)...)))).)).)).......)..).))........)..))


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ptsH-ptsI-crr



Position: 1452-1571, Conformation: #0







97% 90% 75% 50% Nucleotide present N N N Nucleotide identify E < 0.1 Base-pair covariation E < 0.05 Helix-level covariation 97% 90% 75%

Y U R U Y C G Y A C G A R U U Y Y U R U Y A U G G R Y R R R Y U C C R G A R G A G A R C A R Y Y U Y G R G R Y G U R Y Y R U C G Y A C U G A Y A U Y G G Y G G G A Y A A R R 5'