pfkA



Position: 1119-1208, Conformation: #0







DMS reactivity > 1.0 0.0 0.4 0.7 G/U/No data
Position: 0 (position.label in template: 0.5')5' Position: 1 (position.label in template: 1.U) Reactivity: nanU Position: 2 (position.label in template: 2.G) Reactivity: nanG Position: 3 (position.label in template: 3.A) Reactivity: nanA Position: 4 (position.label in template: 4.U) Reactivity: nanU Position: 5 (position.label in template: 5.G) Reactivity: nanG Position: 6 (position.label in template: 6.C) Reactivity: nanC Position: 7 (position.label in template: 7.G) Reactivity: nanG Position: 8 (position.label in template: 8.C) Reactivity: nanC Position: 9 (position.label in template: 9.U) Reactivity: nanU Position: 10 (position.label in template: 10.U) Reactivity: nanU Position: 11 (position.label in template: 11.C) Reactivity: nanC Position: 12 (position.label in template: 12.G) Reactivity: nanG Position: 13 (position.label in template: 13.C) Reactivity: nanC Position: 14 (position.label in template: 14.U) Reactivity: nanU Position: 15 (position.label in template: 15.U) Reactivity: nanU Position: 16 (position.label in template: 16.A) Reactivity: nanA Position: 17 (position.label in template: 17.U) Reactivity: nanU Position: 18 (position.label in template: 18.C) Reactivity: nanC Position: 19 (position.label in template: 19.A) Reactivity: nanA Position: 20 (position.label in template: 20.G) Reactivity: nanG Position: 21 (position.label in template: 21.G) Reactivity: nanG Position: 22 (position.label in template: 22.C) Reactivity: nanC Position: 23 (position.label in template: 23.C) Reactivity: nanC Position: 24 (position.label in template: 24.U) Reactivity: nanU Position: 25 (position.label in template: 25.A) Reactivity: nanA Position: 26 (position.label in template: 26.C) Reactivity: nanC Position: 27 (position.label in template: 27.A) Reactivity: nanA Position: 28 (position.label in template: 28.U) Reactivity: nanU Position: 29 (position.label in template: 29.G) Reactivity: nanG Position: 30 (position.label in template: 30.A) Reactivity: 0A Position: 31 (position.label in template: 31.A) Reactivity: 0A Position: 32 (position.label in template: 32.U) Reactivity: nanU Position: 33 (position.label in template: 33.U) Reactivity: nanU Position: 34 (position.label in template: 34.C) Reactivity: 1C Position: 35 (position.label in template: 35.U) Reactivity: nanU Position: 36 (position.label in template: 36.G) Reactivity: nanG Position: 37 (position.label in template: 37.C) Reactivity: 0C Position: 38 (position.label in template: 38.A) Reactivity: 0A Position: 39 (position.label in template: 39.A) Reactivity: 0A Position: 40 (position.label in template: 40.U) Reactivity: nanU Position: 41 (position.label in template: 41.U) Reactivity: nanU Position: 42 (position.label in template: 42.U) Reactivity: nanU Position: 43 (position.label in template: 43.A) Reactivity: 1A Position: 44 (position.label in template: 44.U) Reactivity: nanU Position: 45 (position.label in template: 45.U) Reactivity: nanU Position: 46 (position.label in template: 46.G) Reactivity: nanG Position: 47 (position.label in template: 47.A) Reactivity: 1A Position: 48 (position.label in template: 48.A) Reactivity: 0A Position: 49 (position.label in template: 49.U) Reactivity: nanU Position: 50 (position.label in template: 50.U) Reactivity: nanU Position: 51 (position.label in template: 51.U) Reactivity: nanU Position: 52 (position.label in template: 52.G) Reactivity: nanG Position: 53 (position.label in template: 53.C) Reactivity: 0C Position: 54 (position.label in template: 54.A) Reactivity: 0A Position: 55 (position.label in template: 55.A) Reactivity: 0A Position: 56 (position.label in template: 56.A) Reactivity: 0A Position: 57 (position.label in template: 57.C) Reactivity: 0C Position: 58 (position.label in template: 58.U) Reactivity: nanU Position: 59 (position.label in template: 59.U) Reactivity: nanU Position: 60 (position.label in template: 60.U) Reactivity: nanU Position: 61 (position.label in template: 61.U) Reactivity: nanU Position: 62 (position.label in template: 62.G) Reactivity: nanG Position: 63 (position.label in template: 63.U) Reactivity: nanU Position: 64 (position.label in template: 64.A) Reactivity: 0A Position: 65 (position.label in template: 65.G) Reactivity: nanG Position: 66 (position.label in template: 66.G) Reactivity: nanG Position: 67 (position.label in template: 67.C) Reactivity: 0C Position: 68 (position.label in template: 68.C) Reactivity: 0C Position: 69 (position.label in template: 69.G) Reactivity: nanG Position: 70 (position.label in template: 70.G) Reactivity: nanG Position: 71 (position.label in template: 71.A) Reactivity: 0A Position: 72 (position.label in template: 72.U) Reactivity: nanU Position: 73 (position.label in template: 73.A) Reactivity: 0A Position: 74 (position.label in template: 74.A) Reactivity: 0A Position: 75 (position.label in template: 75.G) Reactivity: nanG Position: 76 (position.label in template: 76.G) Reactivity: nanG Position: 77 (position.label in template: 77.C) Reactivity: 0C Position: 78 (position.label in template: 78.G) Reactivity: nanG Position: 79 (position.label in template: 79.U) Reactivity: nanU Position: 80 (position.label in template: 80.U) Reactivity: nanU Position: 81 (position.label in template: 81.C) Reactivity: 0.5C Position: 82 (position.label in template: 82.G) Reactivity: nanG Position: 83 (position.label in template: 83.C) Reactivity: 0C Position: 84 (position.label in template: 84.G) Reactivity: nanG Position: 85 (position.label in template: 85.C) Reactivity: 1C Position: 86 (position.label in template: 86.C) Reactivity: 0C Position: 87 (position.label in template: 87.G) Reactivity: nanG Position: 88 (position.label in template: 88.C) Reactivity: 0C Position: 89 (position.label in template: 89.A) Reactivity: 0A Position: 90 (position.label in template: 90.U) Reactivity: nanU Position: 91 (position.label in template: 91.C) Reactivity: 0C Position: 92 (position.label in template: 92.C) Reactivity: 0.5C Position: 93 (position.label in template: 93.G) Reactivity: nanG Position: 94 (position.label in template: 94.G) Reactivity: nanG Position: 95 (position.label in template: 95.C) Reactivity: 0C Position: 96 (position.label in template: 96.A) Reactivity: 0A Position: 97 (position.label in template: 97.U) Reactivity: nanU Position: 98 (position.label in template: 98.G) Reactivity: nanG Position: 99 (position.label in template: 99.G) Reactivity: nanG Position: 100 (position.label in template: 100.A) Reactivity: 1A Position: 101 (position.label in template: 101.C) Reactivity: 0C Position: 102 (position.label in template: 102.A) Reactivity: nanA Position: 103 (position.label in template: 103.A) Reactivity: nanA Position: 104 (position.label in template: 104.A) Reactivity: nanA Position: 105 (position.label in template: 105.G) Reactivity: nanG Position: 106 (position.label in template: 106.C) Reactivity: nanC Position: 107 (position.label in template: 107.G) Reactivity: nanG Position: 108 (position.label in template: 108.C) Reactivity: nanC Position: 109 (position.label in template: 109.A) Reactivity: nanA Position: 110 (position.label in template: 110.C) Reactivity: nanC Position: 111 (position.label in template: 111.U) Reactivity: nanU Position: 112 (position.label in template: 112.U) Reactivity: nanU Position: 113 (position.label in template: 113.U) Reactivity: nanU Position: 114 (position.label in template: 114.G) Reactivity: nanG Position: 115 (position.label in template: 115.U) Reactivity: nanU Position: 116 (position.label in template: 116.C) Reactivity: nanC Position: 117 (position.label in template: 117.A) Reactivity: nanA Position: 118 (position.label in template: 118.G) Reactivity: nanG Position: 119 (position.label in template: 119.C) Reactivity: nanC Position: 120 (position.label in template: 120.A) Reactivity: nanA Position: 121 (position.label in template: 121.A) Reactivity: nanA Position: 122 (position.label in template: 122.U) Reactivity: nanU Position: 123 (position.label in template: 123.A) Reactivity: nanA Position: 124 (position.label in template: 124.U) Reactivity: nanU Position: 125 (position.label in template: 125.G) Reactivity: nanG Position: 126 (position.label in template: 126.A) Reactivity: nanA Position: 127 (position.label in template: 127.G) Reactivity: nanG Position: 128 (position.label in template: 128.G) Reactivity: nanG Position: 129 (position.label in template: 129.C) Reactivity: nanC Position: 130 (position.label in template: 130.G) Reactivity: nanG Position: 131 (position.label in template: 131.3')3' 10 20 30 50 100


pfkA



Position: 1119-1208, Conformation: #0







Retained alignments:


   NC_009792.1       G.A.U.GgCG.CUGCGC.UUAU.CAGGCCUACG.GUAACUU-.--------------g..................................cg----..--.---UUUGUAGGCCGGAUAAGGCG.UUUACGC.CGcC.A.U.C.CGGC...A.U----.--.--..----uacgu.....................uuauc-------G.....GU
   NC_013960.1       G.A.U.G.CG.CUGCGC.UUAU.CCGGCCUACG.G-----UU.UAGCUUUGAUGAAA.....................................GUG-..AG.CCAUUGGUAGGUCGGAUAAGGCGcUUCGCAC.CG.C.A.U.C.CGGC...A.A--AA.UU.CU..AAUG...............................AGAAU---.....G-
   NC_015968.1       G.U.G.G.CG.CUACGC.UUAC.CGGGUCUACA.AAAAAACC.G-------------gccauagagcc..............gguuuuuuuauu---C..GU.GCUUUUGUAGGCCGGGUAAGGCG.A---AGC.CG.C.C.A.C.CCGG...-.-----.--.--..----caa.........................aug--------.....CC
   NC_021870.1       G.A.UgG.CG.CUUCGC.UUAU.CAGGCCUGCG.AUAACGU-.--------------ug................................uau----..--.-GUUUCGUAGGCCGGAUAAAGCG.CUUGCGC.CG.CcA.U.C.UGGC...A.ACCU-.--.--..CGCA...............................UCAGG---.....GC
   NZ_AP019007.1     G.A.U.GgCG.CUGCGC.UUAU.CAGGCCUACG.UUCUUUC-.--------------aa.................................ac----..--.-----CGUAGGCCGGAUAAGGCG.CUUGCGC.CGcC.A.U.C.CGGC...U.-----.--.--..----agugguugggcag.....aaucuuccagaac--------.....GC
   NZ_AP019630.1     GaU.G.G.CG.CUUCGC.UUAU.CAGGCCUACA.UGUCCCGU.GCGAUUUGUGG---auccucgggguuuugucggccugugcgauuuauugacUCAC..GG.GGUUUUGUAGGCCGGGUAAGGCG.C---AGC.CG.C.C.AcC.CGGC...G.CUUUC.GC.AG.aCGC-...............................--------.....--
   NZ_AP022508.1     G.U.G.G.CG.CUUCGC.UUAC.CGGGCCUACA.--------.--------------aaac............................cagac----..--.-----CGUAGGCCGGGUAAGGCG.U---AGC.CG.C.C.A.C.CCGG...C.UAU-U.UU.AU..UGCA...............................G-------.....--
   NZ_AP022547.1     G.A.U.GgCG.CUGCGC.UUAU.CCGGCCUACG.G-------.--------------augaua........................ccguucc----..--.-----CGUAGGCCGGAUAAGGCG.UUUACGC.CGcC.A.U.C.CGGC...A.A--CG.UC.UC..GGGA...............................GAGAUUAU.....GA
   NZ_AP023184.1     G.A.UgG.CG.CUGCGC.UUAU.CAGACCUACA.AUGAACC-.--------------....................................c----..--.---UUUGUAGGUCGGAUAAGGCG.UGUGCGC.CG.CcA.U.C.CGAC...A.AAAAU.GG.CA..GGCA...............................G-------.....--
   NZ_CP011602.1     G.G.U.G.CG.CUGCGC.UUAC.CCGGGCUACC.AGA-----.--------------a...................................c----..--.-----CGUAGCCCGGAUCAGGCG.UUUACGC.CG.C.A.U.C.CGGG...A.AGUCC.CG.GG..UGC-gcugc.....................gcuuaCCCGGGCU.....AC
   NZ_CP012257.1     G.G.U.G.CG.CUGCGC.UUAC.CCGCCUUACG.GGAUAUA-.-----CGGUUGAAU.....................................----..-A.AUUAAUGUAGGGCGGGUAA-GCG.UGAG---.CG.C.A.C.C.CGCC...U.UUUGU.AU.GG..GGCG...............................C-------.....--
   NZ_CP012871.1     G.AgG.G.UG.CUUCGC.UUAU.CCGGCCUACGaUGAA----.--------------ugcg.............................uacc----..--.-----CGUAGGCCGGAUAAGGCG.UUUACGC.CG.C.CaU.C.CGGC...A.C---C.GA.UG..CGG-...............................CAUUG--A.....GC
   NZ_CP013940.1     G.G.U.G.CG.CUGCGC.UUAC.CUGCCCUACG.UUAUC-GC.GGUAAC-GUCACAG.....................................UUCC..GU.AUUUCCGUAGGGCAGGUAA-GCG.----CAG.CG.C.A.C.C.CGCC...-.-GGA-.--.--..----ucaa......................aaaaa-----CCC.....GG
   NZ_CP013990.1     G.U.G.G.CG.CUGCGC.UUAC.CGGGCCUACG.GGUCAUG-.--------------cgguu..........................uagggg----..--.--UUUUGUAAGCCGGGUAAGGCG.A---AGC.CG.C.U.A.C.C---...-.-----.--.--..----cggcaggg...............cggguauu--------.....--
   NZ_CP014007.2     G.A.U.G.GCaUUUCGC.UUAU.CAGGCCU---.--------.--------------acaaauuac...................gccaauccc----..--.--------AGGCCGGAUAACGCG.UUUACGCcGC.C.A.U.C.CGGC...A.UU---.--.--..----acugcauu...............auucccag------A-.....--
   NZ_CP014070.2     G.A.UgG.CG.CUGCGC.UUAU.CAGGCCUAC-.--------.--------------uuau.............................cccc----..--.------GUAGGCCGGAUAAGGCG.UUUUCGC.CG.CcA.U.C.CGGC...AgUGGAG.CG.UA..U---accuguac..............ucauuaacc--------.....GU
   NZ_CP017184.1     G.U.G.G.CG.CUGCGC.UUAC.CGGGCCUACG.GUAAUUAU.G-------------cggucugaugcccucac...ccacagggagagggaac---C..AA.AACCUCGUAGGCCGGGUAAGGCG.A---AGC.CG.C.C.A.C.CCGG...C.UUUUU.AC.UG..UGC-...............................CGG-----.....--
   NZ_CP027107.1     G.G.U.G.CG.CUUCGC.UUAC.CCACCCUACA.UUGACUC-.--------------accuuu........................guuaaug----..--.--CAUUGUAGGGCGGGUAA-GCG.UAUG---.CG.C.A.C.C.CGCC...A.CGG--.--.--..----ucaaaaaac............gauuacagcu-----UCG.....CG
   NZ_CP027986.1     G.U.G.G.CG.CUUCGC.UUAC.CGGGCCUACA.AGCUUGU-.--------------gc.................................cu----..--.--UUUUGUAGGCCGGGUAAGGCG.C---AGC.CG.C.C.A.C.CUGA...C.-----.--.--..----ugggucagaaccu....guaauccacaccca--------.....--
   NZ_CP033744.1     G.A.U.G.CG.CUACGC.UUAU.CAGGCCUACG.GG------.--------------guag............................cacgu----..--.-----UGUAGGCCGGAUAAGGCG.UUUGCGC.CG.C.A.U.C.CGGC...G.AA---.--.--..----ag...........................au------CU.....GC
   NZ_CP033844.1     G.A.U.GgCG.CUGCGC.UUAU.UCGGCCUACG.GA------.--------------ugauaa.........................cgucuc----..--.-----CGUAGGCUGGAUGAGGCG.UUUACGC.CGcC.A.U.C.CGGC...A.A--CG.UC.UC..GGGA...............................GAGAUUAU.....GA
   NZ_CP034036.1     G.C.U.G.UG.UUUCGC.CUGU.UAUGCC----.--------.--------------....................................u----..--.---------GGCA-AAAAGCGCG.UCAGCGC.CG.C.G.C.C.CGGC...G.UGAAC.AG.C-..----...............................-GCUGGCA.....GC
   NZ_CP036175.1     G.C.G.G.CG.CUUCGC.UGGCgCGGGCCUACA.AAAAAAUC.AUAACCUGAUGAUA.....................................UUGU..GA.-UUUUUGUAGGCCGGGCAAGGCG.CUA--GC.CG.C.C.G.C.CCGG...C.AGAAA.UG.UG..AGCA...............................CU------.....--
   NZ_CP037864.1     G.A.U.G.CG.CUGCGC.UUAU.CAGGCCUACG.GGUCGUU-.--------------au.................................cg----..--.-CUUUUGUAGGCCGGAUAAGGCG.UUUACGC.CG.C.A.U.C.CGGC...U.ACUGC.GG.AU..G---...............................--------.....--
   NZ_CP038469.1     G.A.U.G.CG.CUACGC.UUAU.CAGGCUUACA.UGGCGCAUcACAAUUUAUUGAAU.....................................UUUUucAC.AAUUUUAUAGGCUGGAUAAAGCG.UUCGCGU.CG.C.A.U.C.CGGC...A.UGUAAcAA.CG..AACA...............................CUUUUCCA.....GC
   NZ_CP040392.1     G.A.U.G.GCaCUUCAC.UUAU.CAGGCCU---.--------.--------------acaaauuac...................gccaacccc----..--.--------AGGCCGGAUAACGCG.UUUACGCcGC.C.A.U.C.CGGUauuA.UGCAU.UA.UU..CCCA...............................GA------.....--
   NZ_CP041247.1     G.U.G.G.CG.CUACGC.UUAC.CGGGGCUACA.UGA-----.--------------ga.................................cc----..--.-----GGUAGCCCGGAUAAGGCG.UUUACGC.CG.C.C.A.U.CCGG...-.--GGC.UA.AG..CAGG...............................CUUAGCUU.....UC
   NZ_CP041925.1     G.A.U.GgCG.CUGUGC.UUAU.CCGGCCUACA.GG------.--------------g..................................ug----..--.-----UGUAGGCCGGAUAAGGCA.UUUAUGC.CGcC.A.U.C.CGGC...A.CGUGU.G-.--..----...............................---CGACG.....GU
   NZ_CP043318.1     G.U.G.G.CG.CUUCGC.UUAC.CGGGCCUACG.GUAAUUA-.--------------gucggucugucuucua....cggggagagggaaccaa----..--.AACCUCGUAGGCCGGGUAAGGCG.A---AGC.CG.C.C.A.C.CCGG...C.UUUUU.AC.UG..UGC-...............................CGG-----.....--
   NZ_CP043342.1     G.A.UgG.CG.CUGCGC.UUAU.CCGGCCUACA.AGGACUU-.--------------u..................................ac----..--.----UCGUAGGCCGGAUAAGGCG.UUUACGC.CG.CcA.U.C.CGGC...G.UGUU-.--.--..----ca..........................cgc-------A.....UC
   NZ_CP044098.1     G.A.U.G.CG.CUACGC.UUAU.CAGGCCUACG.GA-GUUG-.--------------uua...............................ucg----..--.-CUUUUGUAGGCCGGAUAAGGCG.UUUACGC.CG.C.A.U.C.CGGC...A.-----.--.--..----acugcacacgaucacgccgccuuaucgugau--------.....G-
   NZ_CP044101.1     G.A.UgG.CG.CUUCGC.UUAU.CAGGCCUACG.AGG-----.--------------agggg..........................caugac----..--.-----UGUAGGCCGGAUAAGGCG.CUUGCGC.CG.C.A.U.C.CGGC...A.AAUAC.AA.UAuaCGAA...............................AA------.....--
   NZ_CP045300.1     G.A.U.G.GCaCUUCGC.UUAU.CAGGCCUACA.--------.--------------cauuac.........................gcaaau----..--.-----CGUAGGCCGGAUAAGGCG.UUUACGCcAC.C.A.U.C.CGGC...A.UA---.--.A-..----cugcauu................auucccag-A------.....--
   NZ_CP045771.1     G.A.UgG.CG.CUUCGC.UUAU.CGGGCCUACG.UU------.--------------ucac............................gcuca----..--.---UUUGUAGGCCGGAUAAGGCG.CAAGCGC.CG.C.A.U.C.CGGC...A.GCAGA.GA.AA..AAUG...............................U-------.....--
   NZ_CP045783.1     G.A.UgG.CG.CUGCGC.UUAU.CCGGCCUACA.GGG-----.--------------agug.............................gauc----..--.-----CGUAGGCCGGAUAAGGCG.UUUACGC.CG.CcA.U.C.CGGC...G.CU---.--.--..----u............................uc------AG.....GC
   NZ_CP045845.1     G.A.U.GgCG.CUGCGC.UUAU.CAGGCCUACA.AGG-----.--------------ucugca........................cgauaaa----..--.-----UGUAGACCGGAUAAGGCG.UUUACGC.CGcC.A.U.C.CGGC...A.AUCAA.AG.A-..----ccggcagaa.............augccgguc-U-UUGAA.....GC
   NZ_CP050508.1     G.C.G.G.CG.CUUCGCuUGCU.CGGGCCUACA.GGAAUUGC.GUAAAUUUUUGAUA.....................................UUGC..C-.GGUUUCGUAGGCCGGGUCAGGCG.A------.CG.CcC.G.C.CAGC...-.CGCA-.GC.AG..G---gcggu.....................aacuaCUGCCGCG.....GC
   NZ_CP051548.1     G.A.U.G.CG.CUUCGC.UUAU.CGGGGCUAC-.--------.--------------gcugagccu..................ggcgcuugag----..--.------GUGGCCCGGAUAAGGCA.---ACGC.CG.C.A.U.C.CGGG...A.-----.--.--..----agaggugaauuac.....gccagauaacuug--------.....CC
   NZ_CP055055.1     G.A.U.G.CG.CUUCGC.UUAU.CAGGCCUACG.UGAAUUCU.GCAAUUUAUUGAAU.....................................UUAC..AA.ACUUUUGUAGGCCGGAUAAGGCG.UUCGCGC.CG.C.A.U.C.CGGC...A.UCGAU.AA.AG..CGCA...............................CUUUGUCA.....GC
   NZ_CP055292.1     G.A.U.G.CG.CUUCGC.UUAU.CAGGCCUACG.UGAAUUCU.GCAAUUUAUUGAAU.....................................UUAC..AA.AUUUUUGUAGGUCGGAUAAGGCG.UUCGCGC.CG.C.A.U.C.CGGC...A.UCGAU.AA.AG..CGCA...............................CUUUGUCA.....GC
   NZ_CP060820.1     G.G.U.G.CG.CUGCGC.UUAC.CCGGGCUACA.ACGGUUU-.--------------cgau............................ucaug----..--.-CCUUCGUAGCCCGGGUAAGGCG.A---AGC.CG.C.A.C.C.CGGG...-.----G.AU.GG..CGCG...............................CCGUCGAC.....GC
   NZ_CP065838.1     A.U.G.G.CG.CUGCGC.UUAU.CGGGCCUACA.GG------.--------------ucagc..........................gcgaug----..--.-----UGUAGGCCGGAUAAGGCG.GU-ACGC.CG.C.C.A.U.CCGG...C.A----.A-.--..----cagau....................ucacuc---UU---.....UC
   NZ_CP070290.1     G.A.U.G.CA.CUCCGC.UUAU.CAGGCCUACA.UGAAUUCU.GCAAUUUAUUGAAU.....................................UUGC..AA.GAUUUUGUAGGCCUGAUAAGGCG.UUGACGC.CG.C.A.U.C.CGAC...A.UGGAC.AA.AG..CGUA...............................CUUUGUCA.....GC
   NZ_CP071070.1     G.A.U.GgCG.CUGCGU.UUAU.CAGGCCUACA.G-------.--------------ga.................................gc----..--.-----CGUAGGCCGGAUAAGUCGcGUCACGU.CGcC.A.U.C.CGGC...A.AGGAG.AG.UG..C---gauuaauuaggg.......cacuuauaaacu--U-----.....--
   NZ_CP073236.1     G.G.UgG.CG.CUGCGC.UUAC.CGGGGCUACG.GGUUUCCA.GCCGUUUG-CGAAA.....................................CGGU..AG.UGGGGAGUAGCCCGGGUAAGGCG.UUUACGC.CG.CgA.C.C.CGGG...A.UUUCC.GG.G-..----...............................-CCCGGUG.....CC
   NZ_CP074352.1     G.G.U.G.CG.CGUCGC.UUAC.CCGCCCUACG.A-------.--------------cguuggggaaa...............aauggggcucu----..--.-----UGUAGGGUGGGUAA-GCG.----CAG.CG.C.A.C.C.CACC...A.UAAAC.--.--..----gaug......................guuaa----GAUG.....GG
   NZ_CP077262.1     G.A.U.G.CG.CUGCGC.UUAU.CAGGCCUACG.AGGUC---.--------------guu..............................aucg----..--.-CUUUUGUAGGCCGGAUAAGGCG.UUUACGC.CG.C.A.U.C.CGGC...A.-----.--.--..----acugcacacgaucacgccgccuuaucgugau--------.....G-
   NZ_CP077392.1     G.U.G.G.CG.CUUCGC.UUAC.CGGGCCUACG.GUAAUUAU.G-------------cggucugaugcccuca....cccacgguagaaggaac---C..AA.AACCUCGUAGGCCGGGUAAGGCG.A---AGC.CG.C.C.A.C.CCGG...C.UUUUU.AC.UG..UGC-...............................CGG-----.....--
   NZ_CP082833.1     G.A.U.GgCG.CUAUGC.UUAU.CAGGCCUACG.UGAAGCG-.--------------uaaua..........................uuuuga----..--.---UUUGUAGGCCGGAUAAGGCG.UUUACGC.CGcC.A.U.C.CGGC...A.UGGA-.--.--..----ugucguacgcuuaucagguuuacccuuuucc-----CCG.....GC
   NZ_CP083638.1     G.A.U.G.CG.CUACGC.UUAU.CAGGCCUACA.C-UAUCCU.GCAAUAUAUUGAAU.....................................UGGC..AAgAUUUUUGUAGGCCGGAUAAGGCG.UUCACGC.CG.C.A.U.C.CGGC...A.UGAAC.GA.CG..CGCA...............................CUUUGUCA.....AC
   NZ_CP084874.1     G.A.UgG.CG.CUGCGC.UUAU.CCGGCCUACA.GGG-----.--------------agug.............................gauc----..--.-----CGUAGGCCAGAUAAGGCG.UUUACGC.CG.CcA.U.C.CGGC...G.CU---.--.--..----u............................uc------AG.....GC
   NZ_CP087880.1     G.A.U.G.CG.CUGUGC.UUAU.CAGGCCUACA.AGGUUUCU.GCAAUAUAUUGAGU.....................................UCGC..GA.UAUUUUGUAGGCCGGAUAAGGCG.UUUACGC.CG.C.A.U.C.CGGC...A.AGAAC.AA.AG..CGCA...............................CUUUGUCA.....GC
   NZ_CP088953.1     G.A.U.G.CG.CUUCGC.UUAU.CCACCCUACG.GG--UUCG.G-------------ua................................aua---C..GA.GUUUGUGUAGGGUGGAUAAGCCG.A---AGG.CG.C.A.U.C.CACC...A.UGGA-.--.--..----au...........................uc-----CCG.....GC
   NZ_CP091779.1     G.U.G.G.CG.CUGCGC.UUAC.CGGGCCUACG.AAAACCC-.--------------gcc..............................guac----..--.---UUUGUAGGCCGGGUAAGGCG.C---AGC.CG.C.C.A.C.CCGG...-.-----.--.--..----cuaaa.....................gaucc--------.....CC
   NZ_CP093334.1     G.C.G.G.CG.CUUCGC.UUGCgCGGGCCUACG.GGACUGA-.--------------ugccgguuugcagagcggguucuauggggcagacucg----..--.-CUAUCGUAGGCCGGGCAAGGCG.UCA--GC.CG.C.C.G.CcCGGC...A.GAGAU.GU.C-..---A...............................GGACACUA.....GC
   NZ_CP096201.1     G.A.U.GgCG.CUGCGC.UUAU.CAGGCCUACG.--------.--------------gug...............................ugu----..--.-----UGUAGGCCGGAUAAGGCA.UUUAUGC.CGcC.A.U.C.CGGC...A.CAGGC.UC.AG..CGGC...............................AUUACUUG.....GU
   NZ_CP107077.1     G.A.U.GgCG.CUGCGC.UUAU.CAGGCCUACG.GAGUU---.--------------uga..............................gaug----..--.----UUGUAGGCCGGAUAAGGCG.UAAG--C.CGcC.A.U.C.CGGC...A.--AAG.CG.CC..UGAU...............................GGCGCUGC.....GC
   NZ_LR134485.1     G.A.U.GgCG.CUUCGC.UUAU.CAGGCCUACG.GCUAAUU-.--------------uagg.............................cugg----..--.-AUUUUGUAGGCCGGAUAAGGCG.CUUGCGC.CGcC.A.U.C.CGGC..aA.UGGUU.AAcGC..GGCA...............................GCUUACCGuggucGC


   Structure         (.(.(.(.((....(((.((((.(.((((((((........(.((((...............................................))))..).......)))))))).))))).))).........)).).).).)...((.....(((.(.((.((.....................................)))))))).....))


Back to top


pfkA



Position: 1119-1208, Conformation: #0







97% 90% 75% 50% Nucleotide present N N N Nucleotide identify E < 0.1 Base-pair covariation E < 0.05 Helix-level covariation 97% 90% 75%

G G C G C U C G C U U A Y C G G C C U A C R Y G U A G G C C G G R U A A G G C G G C C G C C C R G 5'