pdhR-aceE-aceF-lpd



Position: 1365-1454, Conformation: #0







DMS reactivity > 1.0 0.0 0.4 0.7 G/U/No data
Position: 0 (position.label in template: 0.5')5' Position: 1 (position.label in template: 1.U) Reactivity: nanU Position: 2 (position.label in template: 2.U) Reactivity: nanU Position: 3 (position.label in template: 3.U) Reactivity: nanU Position: 4 (position.label in template: 4.A) Reactivity: nanA Position: 5 (position.label in template: 5.A) Reactivity: nanA Position: 6 (position.label in template: 6.C) Reactivity: nanC Position: 7 (position.label in template: 7.C) Reactivity: nanC Position: 8 (position.label in template: 8.A) Reactivity: nanA Position: 9 (position.label in template: 9.C) Reactivity: nanC Position: 10 (position.label in template: 10.U) Reactivity: nanU Position: 11 (position.label in template: 11.U) Reactivity: nanU Position: 12 (position.label in template: 12.C) Reactivity: nanC Position: 13 (position.label in template: 13.U) Reactivity: nanU Position: 14 (position.label in template: 14.U) Reactivity: nanU Position: 15 (position.label in template: 15.C) Reactivity: nanC Position: 16 (position.label in template: 16.C) Reactivity: nanC Position: 17 (position.label in template: 17.G) Reactivity: nanG Position: 18 (position.label in template: 18.U) Reactivity: nanU Position: 19 (position.label in template: 19.G) Reactivity: nanG Position: 20 (position.label in template: 20.C) Reactivity: nanC Position: 21 (position.label in template: 21.A) Reactivity: nanA Position: 22 (position.label in template: 22.C) Reactivity: nanC Position: 23 (position.label in template: 23.G) Reactivity: nanG Position: 24 (position.label in template: 24.C) Reactivity: nanC Position: 25 (position.label in template: 25.A) Reactivity: nanA Position: 26 (position.label in template: 26.A) Reactivity: nanA Position: 27 (position.label in template: 27.C) Reactivity: nanC Position: 28 (position.label in template: 28.G) Reactivity: nanG Position: 29 (position.label in template: 29.A) Reactivity: nanA Position: 30 (position.label in template: 30.G) Reactivity: nanG Position: 31 (position.label in template: 31.C) Reactivity: 0C Position: 32 (position.label in template: 32.A) Reactivity: 1A Position: 33 (position.label in template: 33.G) Reactivity: nanG Position: 34 (position.label in template: 34.G) Reactivity: nanG Position: 35 (position.label in template: 35.A) Reactivity: 0A Position: 36 (position.label in template: 36.U) Reactivity: nanU Position: 37 (position.label in template: 37.G) Reactivity: nanG Position: 38 (position.label in template: 38.G) Reactivity: nanG Position: 39 (position.label in template: 39.C) Reactivity: 1C Position: 40 (position.label in template: 40.G) Reactivity: nanG Position: 41 (position.label in template: 41.G) Reactivity: nanG Position: 42 (position.label in template: 42.C) Reactivity: 0C Position: 43 (position.label in template: 43.G) Reactivity: nanG Position: 44 (position.label in template: 44.A) Reactivity: 1A Position: 45 (position.label in template: 45.C) Reactivity: 0C Position: 46 (position.label in template: 46.C) Reactivity: 0C Position: 47 (position.label in template: 47.U) Reactivity: nanU Position: 48 (position.label in template: 48.G) Reactivity: nanG Position: 49 (position.label in template: 49.G) Reactivity: nanG Position: 50 (position.label in template: 50.U) Reactivity: nanU Position: 51 (position.label in template: 51.U) Reactivity: nanU Position: 52 (position.label in template: 52.U) Reactivity: nanU Position: 53 (position.label in template: 53.A) Reactivity: 0.5A Position: 54 (position.label in template: 54.C) Reactivity: 1C Position: 55 (position.label in template: 55.U) Reactivity: nanU Position: 56 (position.label in template: 56.U) Reactivity: nanU Position: 57 (position.label in template: 57.C) Reactivity: 0C Position: 58 (position.label in template: 58.C) Reactivity: 0C Position: 59 (position.label in template: 59.A) Reactivity: 0A Position: 60 (position.label in template: 60.G) Reactivity: nanG Position: 61 (position.label in template: 61.G) Reactivity: nanG Position: 62 (position.label in template: 62.G) Reactivity: nanG Position: 63 (position.label in template: 63.C) Reactivity: 0C Position: 64 (position.label in template: 64.C) Reactivity: 0C Position: 65 (position.label in template: 65.A) Reactivity: 0A Position: 66 (position.label in template: 66.C) Reactivity: 0C Position: 67 (position.label in template: 67.A) Reactivity: 0A Position: 68 (position.label in template: 68.U) Reactivity: nanU Position: 69 (position.label in template: 69.C) Reactivity: 0C Position: 70 (position.label in template: 70.U) Reactivity: nanU Position: 71 (position.label in template: 71.C) Reactivity: 1C Position: 72 (position.label in template: 72.C) Reactivity: 0C Position: 73 (position.label in template: 73.C) Reactivity: 0C Position: 74 (position.label in template: 74.C) Reactivity: 0C Position: 75 (position.label in template: 75.G) Reactivity: nanG Position: 76 (position.label in template: 76.G) Reactivity: nanG Position: 77 (position.label in template: 77.G) Reactivity: nanG Position: 78 (position.label in template: 78.C) Reactivity: 0C Position: 79 (position.label in template: 79.G) Reactivity: nanG Position: 80 (position.label in template: 80.U) Reactivity: nanU Position: 81 (position.label in template: 81.G) Reactivity: nanG Position: 82 (position.label in template: 82.U) Reactivity: nanU Position: 83 (position.label in template: 83.A) Reactivity: 0.5A Position: 84 (position.label in template: 84.C) Reactivity: 0C Position: 85 (position.label in template: 85.G) Reactivity: nanG Position: 86 (position.label in template: 86.C) Reactivity: 1C Position: 87 (position.label in template: 87.U) Reactivity: nanU Position: 88 (position.label in template: 88.C) Reactivity: 0C Position: 89 (position.label in template: 89.G) Reactivity: nanG Position: 90 (position.label in template: 90.U) Reactivity: nanU Position: 91 (position.label in template: 91.G) Reactivity: nanG Position: 92 (position.label in template: 92.C) Reactivity: 0.5C Position: 93 (position.label in template: 93.U) Reactivity: nanU Position: 94 (position.label in template: 94.U) Reactivity: nanU Position: 95 (position.label in template: 95.U) Reactivity: nanU Position: 96 (position.label in template: 96.C) Reactivity: 0C Position: 97 (position.label in template: 97.C) Reactivity: 0C Position: 98 (position.label in template: 98.U) Reactivity: nanU Position: 99 (position.label in template: 99.G) Reactivity: nanG Position: 100 (position.label in template: 100.G) Reactivity: nanG Position: 101 (position.label in template: 101.A) Reactivity: 0A Position: 102 (position.label in template: 102.A) Reactivity: nanA Position: 103 (position.label in template: 103.G) Reactivity: nanG Position: 104 (position.label in template: 104.G) Reactivity: nanG Position: 105 (position.label in template: 105.U) Reactivity: nanU Position: 106 (position.label in template: 106.C) Reactivity: nanC Position: 107 (position.label in template: 107.G) Reactivity: nanG Position: 108 (position.label in template: 108.U) Reactivity: nanU Position: 109 (position.label in template: 109.C) Reactivity: nanC Position: 110 (position.label in template: 110.U) Reactivity: nanU Position: 111 (position.label in template: 111.G) Reactivity: nanG Position: 112 (position.label in template: 112.A) Reactivity: nanA Position: 113 (position.label in template: 113.C) Reactivity: nanC Position: 114 (position.label in template: 114.U) Reactivity: nanU Position: 115 (position.label in template: 115.C) Reactivity: nanC Position: 116 (position.label in template: 116.A) Reactivity: nanA Position: 117 (position.label in template: 117.G) Reactivity: nanG Position: 118 (position.label in template: 118.G) Reactivity: nanG Position: 119 (position.label in template: 119.A) Reactivity: nanA Position: 120 (position.label in template: 120.G) Reactivity: nanG Position: 121 (position.label in template: 121.C) Reactivity: nanC Position: 122 (position.label in template: 122.A) Reactivity: nanA Position: 123 (position.label in template: 123.G) Reactivity: nanG Position: 124 (position.label in template: 124.C) Reactivity: nanC Position: 125 (position.label in template: 125.U) Reactivity: nanU Position: 126 (position.label in template: 126.G) Reactivity: nanG Position: 127 (position.label in template: 127.G) Reactivity: nanG Position: 128 (position.label in template: 128.A) Reactivity: nanA Position: 129 (position.label in template: 129.U) Reactivity: nanU Position: 130 (position.label in template: 130.A) Reactivity: nanA Position: 131 (position.label in template: 131.3')3' 10 20 30 50 100


pdhR-aceE-aceF-lpd



Position: 1365-1454, Conformation: #0







Retained alignments:


   NC_002977.6       C.A.........C.....G...C...U...C..C...C....G....A...C....C....G....G....G......A.....C...C...A....U....G.....G............C....G...G..C......GACCUGGUGUUUUU...................................CCA.GG.GC.CA....U.U.C..G..G..C..G.C....CC.G....G....C..A.U.C....U...A..U..G....C..C.A.....G..G.GC.A...U...U.U..C....UG...G..AA...GG.AC.G...GCU.....................................G...A...C..C...G.A....G....G...A..G....C..A..U..C....UG....G.A
   NC_003155.5       C.G.........C.....G...-...-...-..G...C....A....A...G....G....A....C....G......A.....G...G...G....C....Ga..cgG............C....G...G..C......GACCAGAUCUUCUU...................................CCA.GG.GC.CA....U.G.C..C..U..C..G.C....CG.G....G....C..A.U.C....U...A..C..G....C..C.C.....G..C.GC.G...U...U.C..C....UC...C..UG...GA.CC.G...GCU.....................................G...G...A..C...G.A....G....C...G..G....C..A..G..C....UC....G.A
   NC_003910.7       A.A.........A.....G...C...G...-..G...C....A....A...C....G....C...cA....G......A.....A...A...A....U....G.....G............C....G...G..C......GAUUUUAUUUUCGC...................................ACA.AG.GU.CA....U.A.U..U..U..C..U.C....CA.G....G....U..A.U.U....U...A..U..U....C..A.C.....G..U.GC.U...U...U.C..A....UG...G..AA...GG.GC.G...UUU.....................................A...A...C..U...-.-....-....G...A..A....G..A..U..C....AA....A.U
   NC_004347.2       C.G.........C.....G...G...A...C..C...A....A....A...C....G....A....A....A......A.....A...G...A....C....G.....G............C....G...G..C......GACUUAGUGUAUUU...................................CCA.GG.GC.CA....U.A.U..C..G..C..U.C....CU.G....G....U..A.U.U....U...A..U..G....C..G.C.....G..U.UC.A...U...U.C..C....UU...G..AA...GG.UC.G...UUU.....................................A...A...G..C...G.A....A....G...A..U....C..A..A..U....UA....G.C
   NC_004369.1       C.G.........C.....G..gC...A...A..G...-....G....A...C....C....A....C....C......C.....G...G...G....U....G.....G............C....G...G..U......GACCAGGUCUUCUU...................................CCA.GG.GU.CA....C.G.C..C..U..C..C.C....CG.G....G....C..A.U.G....U...A..C..G....C..C.C.....G..C.GC.C...U...U.C..C....UC...G..AG...GG.CC.G...UCU.....................................C...A...C..C...G.A....G....-...A..G....C..G..A..U....CU....G.G
   NC_004578.1       C.G.........C.....G...G...G...C..G...U....A....C...C....G....A....G....C......A.....G...U...U....C....G.....C............C....G...G..U......GAUCUGGUUUACAU...................................CCA.AG.GC.CA....U.U.C..C..U..C..G.C....CA.G....G....C..A.U.C....U...A..C..G....G..C.A.....G..G.GC.U...U...A.U..C....UG...G..AA...GG.UC.G...CCU.....................................G...A...G..C...G.A....A....G...A..G....C..A..A..C....UG....G.A
   NC_004603.1       C.G.........U.....G...C...G...C..C...A....A....A...C....G....A....G....A......A.....G...G...A....C....G.....G............U....G...G..U......GACCUAGUUUACUA...................................CCA.AG.GU.CA....C.A.U..C..U..C..A.C....CG.G....G....U..A.U.C....U...A..C..G....C..U.C.....G..U.GC.G...U...U.C..G....UU...G..AA...GG.UC.G...UCU.....................................A...A...C..U...G.A....A....G...A..G....C..A..G..C....UA....G.A
   NC_004757.1       C.G.........G.....G...C...C...G..C...C....A....A...U....G....A....A....C......A.....U...C...A....G....G.....G............C....G...G..A......GACCUGGUUUACGU...................................ACA.GG.GC.CA...uU.C.U..G..-..C..U.C....CC.G....G....U..A.U.C....U...A..U..G....C..A.C.....G..U.GC.U...U...U.C..-....--...-..--...--.--.-...---cugcuggaug.............aauugacuucc...-...-...-..-...-.-....-....G...A..U....C..A..G..C....UC....G.A
   NC_005126.1       C.G.........U.....G...C...C...C..G...U....A....A...U....G....A....A....A......A.....U...G...A....C....G.....G............C....G...G..U......GAUUUGGUUUAUUU...................................CCA.AG.GU.CA....U.A.U..C..U..C..U.C....CA.G....G....U..G.U.C....U...A..C..G....C..U.C.....G..U.GC.U...U...U.C..C....UU...G..AA...GG.CC.G...UUU.....................................A...A...C..U...G.A....G....G...A..G....C..A..G..A....UG....A.A
   NC_005966.1       C.G.........U.....G...C...C...A..A...U....A....G...U....G....A....U....A......A.....C...U...U....U....G.....G............C....G...G..C......GACAUGAUCUAUUA...................................UCA.AG.GU.CA....C.U.G..C..G..C..A.C....CA.G....G....U..A.U.U....U...A..U..G....C..A.C.....G..U.UC.A...U...U.C..C....UU...G..AA...GG.CC.G...UUU.....................................G...A...C..U...G.A....A....G...A..C....C..A..G..C....UC....A.A
   NC_006300.1       U.A.........A.....A...G...C...C..G...C....A....A..cC....G....A....G....A......A.....A...A...A....C....G.....G............U....G...G..U......GACCUAGUCUUUUU...................................CCA.AG.GC.CA....U.G.C..C..G..C..G.C....CG.G....G....U..A.U.U....U...A..U..G....C..U.C.....G..A.GC.U...U...U.U..G....UU...G..AA...GG.CC.G...CAU.....................................U...U...C..U...C.A....G....G...A..A....C..A..A..A....UG....G.A
   NC_006396.1       U.G.........C.....C...C...G...G..C...C....G....G...C....G....A....G....Gu...cgA.....G...G...A....G....A.....A............C....G...G..C......GUGCUGGAGUACCU...................................CCA.GC.AC.CU....C.G.U..C..U..U..U.C....CG.G....U....G..C.U.G....G...A..C..G....U..U.C.....G..C.GG.C...G...A.U..U....CG...-..--...--.--.-...---uucg..........................ucgu...-...-...-..-...C.G....A....G...-..-....C..G..C..C....CG....G.A
   NC_006461.1       C.G.........C.....G...G...G...C..C...G....G....A...G....G....-....-....C......G.....G...G...G....Cu..gG.....A............C....C...G..G......GACCUCGUCUUCUU...................................CCA.GG.GC.CA....C.G.C..C..U..C..C.C....CC.G....G....G..A.A.C....U...A..C..G....C..C.C.....G..G.GC.C...U...U.U..U....UG...G..AG...GG.GC.G...---.....................................G...C...U..U...A.A....G....G...A..Gg..aG..G..A..C....CU....G.G
   NC_006512.1       C.G.........U.....G...C...G...C..C...A....A....A...U....G....A....A....G......A.....C...G...A....U....G.....G............U....G...G..U......GACUUCCUGUUUAU...................................UCA.GG.GC.CA....U.G.U..G..U..C..A.C....CC.G....G....U..A.U.U....U...A..U..G....G..U.C.....G..U.GC.U...U...U.C..A....UU...G..AA...GG.AC.G...CUU.....................................G...A...C..C...G.A....A....G...A..G....C..A..A..U....UG....A.A
   NC_006513.1       C.G.........U.....G...-...-...C..G...C...cG....A...C....G...aA....G....G......A.....C...C...A....C....G.....G............C....G...G..C......GACCUGAUCUUCUU...................................CCA.GG.GC.CA....C.U.C..G..G..U..G.C....CG.G....G....C..G.U.C....U...A..U..G....C..C.C.....G..C.GC.G...U...U.C..A....UG...C..UC...GG.GC.G...CCU.....................................C...A...C..C...G.A....C....G...A..A....C..A..G..C....UC....G.A
   NC_007164.1       C.G.........C.....G...-...-...-..G...C....A....A...G....G....A....C....C......Ac..ccG...G...G....C....G.....G............C....G...G..C......GACCAGAUCUUCUU...................................CCA.AG.GC.CA....C.G.C..C..U..C..C.C....CC.G....G....C..A.U.G....U...A..C..G....C..C.C.....G..C.GC.U...U...U.C..U....UG...G..AA...GG.CC.G...CCU.....................................A...A...G..C...G.A....G....G...A..A....G..A..C..C....UG....G.A
   NC_007204.1       C.G.........U.....G...C...U...G..C...C....A....G...U....G....A....U....C......A.....U...U...U....C....G.....G............U....G...G..U......GAUAUGAUUUAUUA...................................CCA.AG.GU.CA....C.U.C..A..G..C..G.C....CU.G....G....U..A.U.C....U...A..U..G....C..A.C.....G..U.UC.U...U...A.U..C....UA...G..AA...GG.GC.G...CUU.....................................A...A...C..U...G.A....A....G...A..G....C..A..G..C....UA....G.A
   NC_007292.1       C.G.........U.....G...C...G...C..G...U....A....A...U....A....A....G....C......A.....C...G...A....U....G.....G............C....G...G..U......GACUUAGUAUAUUU...................................UCA.AG.GC.CA....U.A.U..U..U..C..A.C....CU.G....G....U..A.U.A....U...A..U..G....C..C.C.....G..U.GC.U...U...U.U..C....UU...G..AA...GG.AC.G...AUU.....................................A...C...A..U...G.A....G....G...A..C....C..A..A..A....UA....A.A
   NC_007481.1       A.A.........A.....G...C...A...C..C...A....A....A...C....G....A....U....G......U.....A...G...A....C....G.....G............U....G...G..C......GACUUAGUUUAUUA...................................CCA.GG.GG.CA....U.A.U..U..U..C..U.C....CG.G....-....-..G.U.A....U...U..U..A....U..G.C.....A..C.GC.G...C...-.-..-....--...-..--...--.--.-...---auuuguagaaggg.......cguuuaucggcauc...-...-...-..-...-.-....-....-...-..G....C..A..G..C....UA....G.A
   NC_007484.1       C.G.........A.....G...C...C...A..G...A....A....A...U....G....A....A....G......A.....G...C...A....A....G.....A............G....G...C..C......GACAUUGUUUAUUU...................................UCA.AG.GC.CA....C.G.C..C..U..C..G.C....CG.G....G....U..C.C.C....U...A..C..G....C..U.C.....G..C.GC.U...U...U.U..C....UU...G..AA...GG.CC.G...UUU.....................................A...U...C..C...G.A....G....C...A..G....C..A..G..C....UG....G.A
   NC_007510.1       -.-.........-.....G...C...A...C..G...C....A....G...C....GuccgA....G....C......A.....G...C...A....C....G.....G............C....G...G..C......GAUCUCGUGUUCGU...................................GCA.GG.GC.CA....C.U.C..G..U..C..G.C....CG.G....G....C..G.U.G....U...A..C..U....C..G.C.....G..C.GC.G...U...U.C..C....U-...-..--...--.--.-...---gcucggcc.................gccugaagg...-...-...-..-...-.A....A....G...A..G....C..A..G..C....UC....G.A
   NC_007511.1       C.G.........C.....G...G...C...C..G...C....A....C...C....G....A....U....A......C.....G...U...U....C....G.....A............C....G...G..C......GACAUGGUCUACAU...................................CCA.GG.GC.CAu..uC.G.-..G..C..G..C.C....CG.-....G....C..A.U.C....U...A..U..G....G..C.C.....G..C.GC.A...U...A.C..C....UG...G..AA...GG.CC.G...CAU.....................................C...A...C..C...G.A....C....G...C..G....C..A..G..C....UC....G.A
   NC_007614.1       C.A.........U.....G...C...C...A..G...G....U....C...G....G....A....G....A......A.....U...C...A....C....G.....G............U....G...G..C......GACCUGAUAUUUGC...................................ACA.GG.GG.CA....U.U.C..A..U..C..G.C....CC.G....G....U..C.U.U....U...A..U..G....C..C.U.....A..U.GC.U...U...U.U..C....U-...-..--...--.--.-...---gcuggggg.................aacugacag...-...-...-..-...-.A....G....G...A..G....C..A..G..C....UC....A.A
   NC_007645.1       C.A.........C.....G...C...U...G..G...C....G....A...C....G....A....C....A......A.....G...C...G....C....G.....A............A....G...G..C......GAUUUGAUCUACUU...................................CCA.GG.GU.CA....C.A.C..U..U..C..C.C....CU.G....G....C..G.U.A....U...A..C..G....C..C.C.....G..U.UC.U...U...U.C..C....UG...G..AA...GG.CC.G...CUU.....................................C...U...C..U...G.A....A....G...A..G....C..A..G..A....UG....G.A
   NC_007712.1       C.G.........C.....G...C...G...C..G...C....A....A...C....G....A....U....A......A.....A...G...A....C....G.....G............C....G...G..C......GACCUGGUCUACUU...................................CCA.GG.GG.CA....C.A.U..C..U..C..C.C....CC.G....G....C..G.U.G....U...A..C..G....C..U.C.....G..C.GC.C...U...U.C..C....UU...G..AA...GG.UC.G...UCU.....................................G...A...G..C...G.A....A....G...A..U....C..A..G..A....UG....A.A
   NC_007908.1       C.A.........U.....G...C...C...G..A...G....A....G...U....G....A....A....A......A.....C...C...A....U....G.....G............U....G...G..U......GACUGUCUCUAUAU...................................CCA.GG.GU.CA....C.G.U..G..G..C..A.C....CC.G....G....U..G.U.U....U...A..U..G....C..C.C.....G..U.GC.C...U...A.C..C....UU...G..AA...GG.CC.G...UUU.....................................G...A...C..C...G.A....A....G...A..G....C..A..G..U....UG....C.U
   NC_007912.1       C.G.........C.....G...G...U...G..A...C....G....A...C....G....G....U....G......A.....U...C...A....G....C.....G............C....G...G..C......GAUUUGAUUUACUU...................................CCA.GG.GC.CA....C.A.U..U..U..C..C.C....CU.G....G....U..A.U.U....U...A..U..G....C..G.C.....G..U.UC.U...U...A.C..U....UA...G..AA...GG.GC.G...UUU.....................................G...U...C..G...G.A....A....G...A..G....C..A..A..C....UA....G.A
   NC_007947.1       C.G.........C.....G...C...C...G..C...C....A....A...C....G....A....G....C......G.....U...U...U....C....G.....G............C....G...G..C......GACCUGAUUUACUU...................................UCA.GG.GC.CA....C.U.C..C..U..C..U.C....CC.G....G....U..G.U.G....U...A..U..G....C..G.C.....G..C.GC.C...U...U.U..C....UC...G..AA...GG.CC.G...CAU.....................................C...A...C..G...G.A....A....G...A..G....C..A..G..C....UG....U.C
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   NZ_LT906483.1     C.G.........C.....G...G...U...A..A...G....G....C...C....C....A....C....C......C.....G...G...G....C....G.....G............U....G...G..C......GACCAGGUGUUCAU...................................CCA.GG.GU.CA....C.G.C..C..U..C..G.C....CG.G....G....C..A.U.C....U...A..C..G....C..C.C.....G..G.GC.G...U...U.C..C....UG...G..AG...GG.CC.-...---.....................................G...G...C..U...C.A....-....-...-..-....C..C..G..C....CG....A.C
   NZ_LT907988.1     U.G.........-.....G...C...A...C..G...CcgagU....C...C....G....A....G....G......A.....C...C...A....C....G.....G............C....G...G..C......GACCUGGUCUAUUU...................................CCA.GG.GC.CA....C.A.C..C..U..C..G.C....CG.G....G....C..A.U.G....U...A..C..G....G..C.C.....G..C.GC.C...U...A.C..C....UC...G..AA...GG.CC.G...CCU.....................................G...A...C..C...G.A....A....G...A..G....C..A..A..C....UG....G.A
   NZ_LT996886.1     C.G.........C.....G...-...-...-..G...C....A....A...G....G....A....U....C......A.....C...CcagG....C....G.....G............C....G...G..C......GACCAGAUUUACUU...................................CCA.GG.GC.CA....C.G.C..G..A..G..C.C....CG.G....G....C..A.U.G....U...A..U..G....C..G.C.....G..C.GC.C...U...A.C..C....UC...G..CC...GG.AC.G...CCU.....................................C...A...C..C...G.A....G....G...-..A....C..G..A..C...cUC....G.A
   NZ_OU343031.1     C.A.........U.....G...C...A...C..C...G....A....G...U....G....C....G....C......A.....A...C...A....C....G.....G............C....G...G..A......GAUUUAGUGUUUGU...................................UCA.AG.GC.CA....C.U.C..A..U..C..U.C....CU.G....G....C..A.U.U....U...A..U..U....C..G.C.....G..U.GC.A...U...U.U..C....UA...U..UA...GG.UC.G...ACU.....................................C...A...C..C...G.A....G....G...A..G....C..A..G..C....UA....G.A
   NZ_OU594967.1     C.G.........U.....G...C...A...C..C...U....A....A...C....G....A....A....A......A.....A...G...A....U....G.....G............U....G...G..C......GAUUUAGUUUAUUA...................................UCA.GG.GA.CA....U.A.U..C..U..C..U.C....CA.G....G....G..A.U.C....U...A..U..U....C..U.C.....G..C.GC.U...U...U.U..G....UU...G..AA...GG.CC.G...UUU.....................................G...A...G..U...G.C....U....G...A..A....C..A..G..C....UG....G.A
   NZ_OU912926.1     C.A.........U.....G...G...C...A..A...G....A....C...U....G....A....A....A......A.....U...C...A....C....G.....G............C....G...G..U......GACCUGGUUUAUUU...................................CCA.GG.GA.CA....U.G.C..A..U..C..G.C....CC.G....G....C..A.U.G....U...A..C..G....C..A.C.....G..C.GC.U...U...U.U..C....UU...G..AA...GG.GC.-...---.....................................G...C...C..U...C.A....G...cG...A..G....G..A..G..Ca..aUU....G.U
   NZ_OW485601.1     C.G.........C.....G...C...C...C..C...U....A....C...C....G....Ac..cG....C......C.....A...G...-....-....G.....G............C....G...G..C......GACCUGGUCUAUAU...................................CCA.GG.GC.CA....C.A.G..C..U..C..G.C....CG.G....G....C..A.U.C....U...A..C..G....C..C.C.....G..C.GC.C...U...U.C..G....UC...G..AA...GG.CC.-...---.....................................G...G...C..U...GaA....C....G...A..G....G..C..G..Ca..aUU....G.-


   Structure         (.(.........(.....(...(...(...(..(...(.............(....(...........................(...(...(....(....(.......................(...(..(........(((((..........................................))).)).)).).....).).)..)..)............))......)....)..).).)....)...)..)..).......(.(..........((.(...(...(.(..(....((...........((.((.............................................)...)...)..)...).)....)....)...)..).......)..)..)..........).)


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pdhR-aceE-aceF-lpd



Position: 1365-1454, Conformation: #0







97% 90% 75% 50% Nucleotide present N N N Nucleotide identify E < 0.1 Base-pair covariation E < 0.05 Helix-level covariation 97% 90% 75%

C R G R G A R R Y G G Y G G Y G A Y Y R R U U Y U Y C A R G G Y C A Y Y C C C G G Y R U U A Y G C C G Y G C U U Y U G A R G G C G Y U R Y G A R G A C A R Y U R R 5'