nrdA-nrdB-yfaE



Position: 2427-2567, Conformation: #0







DMS reactivity > 1.0 0.0 0.4 0.7 G/U/No data
Position: 0 (position.label in template: 0.5')5' Position: 1 (position.label in template: 1.G) Reactivity: nanG Position: 2 (position.label in template: 2.G) Reactivity: nanG Position: 3 (position.label in template: 3.A) Reactivity: nanA Position: 4 (position.label in template: 4.U) Reactivity: nanU Position: 5 (position.label in template: 5.G) Reactivity: nanG Position: 6 (position.label in template: 6.C) Reactivity: nanC Position: 7 (position.label in template: 7.G) Reactivity: nanG Position: 8 (position.label in template: 8.G) Reactivity: nanG Position: 9 (position.label in template: 9.C) Reactivity: nanC Position: 10 (position.label in template: 10.G) Reactivity: nanG Position: 11 (position.label in template: 11.U) Reactivity: nanU Position: 12 (position.label in template: 12.A) Reactivity: nanA Position: 13 (position.label in template: 13.A) Reactivity: nanA Position: 14 (position.label in template: 14.A) Reactivity: nanA Position: 15 (position.label in template: 15.C) Reactivity: nanC Position: 16 (position.label in template: 16.G) Reactivity: nanG Position: 17 (position.label in template: 17.C) Reactivity: nanC Position: 18 (position.label in template: 18.C) Reactivity: nanC Position: 19 (position.label in template: 19.U) Reactivity: nanU Position: 20 (position.label in template: 20.U) Reactivity: nanU Position: 21 (position.label in template: 21.A) Reactivity: nanA Position: 22 (position.label in template: 22.U) Reactivity: nanU Position: 23 (position.label in template: 23.C) Reactivity: nanC Position: 24 (position.label in template: 24.C) Reactivity: nanC Position: 25 (position.label in template: 25.G) Reactivity: nanG Position: 26 (position.label in template: 26.G) Reactivity: nanG Position: 27 (position.label in template: 27.C) Reactivity: nanC Position: 28 (position.label in template: 28.C) Reactivity: nanC Position: 29 (position.label in template: 29.U) Reactivity: nanU Position: 30 (position.label in template: 30.A) Reactivity: nanA Position: 31 (position.label in template: 31.C) Reactivity: nanC Position: 32 (position.label in template: 32.G) Reactivity: nanG Position: 33 (position.label in template: 33.G) Reactivity: nanG Position: 34 (position.label in template: 34.C) Reactivity: nanC Position: 35 (position.label in template: 35.U) Reactivity: nanU Position: 36 (position.label in template: 36.C) Reactivity: 1C Position: 37 (position.label in template: 37.G) Reactivity: nanG Position: 38 (position.label in template: 38.G) Reactivity: nanG Position: 39 (position.label in template: 39.U) Reactivity: nanU Position: 40 (position.label in template: 40.U) Reactivity: nanU Position: 41 (position.label in template: 41.U) Reactivity: nanU Position: 42 (position.label in template: 42.G) Reactivity: nanG Position: 43 (position.label in template: 43.U) Reactivity: nanU Position: 44 (position.label in template: 44.A) Reactivity: 0A Position: 45 (position.label in template: 45.G) Reactivity: nanG Position: 46 (position.label in template: 46.G) Reactivity: nanG Position: 47 (position.label in template: 47.C) Reactivity: 0C Position: 48 (position.label in template: 48.C) Reactivity: 0C Position: 49 (position.label in template: 49.U) Reactivity: nanU Position: 50 (position.label in template: 50.G) Reactivity: nanG Position: 51 (position.label in template: 51.A) Reactivity: 0A Position: 52 (position.label in template: 52.U) Reactivity: nanU Position: 53 (position.label in template: 53.A) Reactivity: 0.5A Position: 54 (position.label in template: 54.A) Reactivity: 1A Position: 55 (position.label in template: 55.G) Reactivity: nanG Position: 56 (position.label in template: 56.A) Reactivity: 0A Position: 57 (position.label in template: 57.C) Reactivity: 0C Position: 58 (position.label in template: 58.G) Reactivity: nanG Position: 59 (position.label in template: 59.C) Reactivity: 0C Position: 60 (position.label in template: 60.G) Reactivity: nanG Position: 61 (position.label in template: 61.C) Reactivity: 1C Position: 62 (position.label in template: 62.C) Reactivity: 1C Position: 63 (position.label in template: 63.A) Reactivity: 1A Position: 64 (position.label in template: 64.G) Reactivity: nanG Position: 65 (position.label in template: 65.C) Reactivity: 0C Position: 66 (position.label in template: 66.G) Reactivity: nanG Position: 67 (position.label in template: 67.U) Reactivity: nanU Position: 68 (position.label in template: 68.C) Reactivity: 0C Position: 69 (position.label in template: 69.G) Reactivity: nanG Position: 70 (position.label in template: 70.C) Reactivity: 1C Position: 71 (position.label in template: 71.A) Reactivity: 0A Position: 72 (position.label in template: 72.U) Reactivity: nanU Position: 73 (position.label in template: 73.C) Reactivity: 0C Position: 74 (position.label in template: 74.A) Reactivity: 1A Position: 75 (position.label in template: 75.G) Reactivity: nanG Position: 76 (position.label in template: 76.G) Reactivity: nanG Position: 77 (position.label in template: 77.C) Reactivity: 0C Position: 78 (position.label in template: 78.U) Reactivity: nanU Position: 79 (position.label in template: 79.C) Reactivity: 0C Position: 80 (position.label in template: 80.C) Reactivity: 0.5C Position: 81 (position.label in template: 81.G) Reactivity: nanG Position: 82 (position.label in template: 82.G) Reactivity: nanG Position: 83 (position.label in template: 83.G) Reactivity: nanG Position: 84 (position.label in template: 84.U) Reactivity: nanU Position: 85 (position.label in template: 85.G) Reactivity: nanG Position: 86 (position.label in template: 86.C) Reactivity: 0C Position: 87 (position.label in template: 87.C) Reactivity: 0C Position: 88 (position.label in template: 88.G) Reactivity: nanG Position: 89 (position.label in template: 89.G) Reactivity: nanG Position: 90 (position.label in template: 90.A) Reactivity: 0A Position: 91 (position.label in template: 91.U) Reactivity: nanU Position: 92 (position.label in template: 92.G) Reactivity: nanG Position: 93 (position.label in template: 93.C) Reactivity: 1C Position: 94 (position.label in template: 94.A) Reactivity: 1A Position: 95 (position.label in template: 95.G) Reactivity: nanG Position: 96 (position.label in template: 96.C) Reactivity: 0C Position: 97 (position.label in template: 97.G) Reactivity: nanG Position: 98 (position.label in template: 98.U) Reactivity: nanU Position: 99 (position.label in template: 99.G) Reactivity: nanG Position: 100 (position.label in template: 100.A) Reactivity: 1A Position: 101 (position.label in template: 101.A) Reactivity: 1A Position: 102 (position.label in template: 102.C) Reactivity: 0C Position: 103 (position.label in template: 103.G) Reactivity: nanG Position: 104 (position.label in template: 104.C) Reactivity: 0C Position: 105 (position.label in template: 105.C) Reactivity: 0C Position: 106 (position.label in template: 106.U) Reactivity: nanU Position: 107 (position.label in template: 107.U) Reactivity: nanU Position: 108 (position.label in template: 108.A) Reactivity: 0.5A Position: 109 (position.label in template: 109.U) Reactivity: nanU Position: 110 (position.label in template: 110.C) Reactivity: 0C Position: 111 (position.label in template: 111.C) Reactivity: 0C Position: 112 (position.label in template: 112.G) Reactivity: nanG Position: 113 (position.label in template: 113.G) Reactivity: nanG Position: 114 (position.label in template: 114.C) Reactivity: 0C Position: 115 (position.label in template: 115.C) Reactivity: 0C Position: 116 (position.label in template: 116.U) Reactivity: nanU Position: 117 (position.label in template: 117.A) Reactivity: 0A Position: 118 (position.label in template: 118.C) Reactivity: 0.5C Position: 119 (position.label in template: 119.G) Reactivity: nanG Position: 120 (position.label in template: 120.G) Reactivity: nanG Position: 121 (position.label in template: 121.C) Reactivity: 1C Position: 122 (position.label in template: 122.U) Reactivity: nanU Position: 123 (position.label in template: 123.C) Reactivity: 0.5C Position: 124 (position.label in template: 124.G) Reactivity: nanG Position: 125 (position.label in template: 125.G) Reactivity: nanG Position: 126 (position.label in template: 126.A) Reactivity: 1A Position: 127 (position.label in template: 127.U) Reactivity: nanU Position: 128 (position.label in template: 128.U) Reactivity: nanU Position: 129 (position.label in template: 129.U) Reactivity: nanU Position: 130 (position.label in template: 130.G) Reactivity: nanG Position: 131 (position.label in template: 131.U) Reactivity: nanU Position: 132 (position.label in template: 132.A) Reactivity: 1A Position: 133 (position.label in template: 133.G) Reactivity: nanG Position: 134 (position.label in template: 134.G) Reactivity: nanG Position: 135 (position.label in template: 135.C) Reactivity: 0C Position: 136 (position.label in template: 136.C) Reactivity: 0C Position: 137 (position.label in template: 137.U) Reactivity: nanU Position: 138 (position.label in template: 138.G) Reactivity: nanG Position: 139 (position.label in template: 139.A) Reactivity: 0.5A Position: 140 (position.label in template: 140.U) Reactivity: nanU Position: 141 (position.label in template: 141.A) Reactivity: 1A Position: 142 (position.label in template: 142.A) Reactivity: 0.5A Position: 143 (position.label in template: 143.G) Reactivity: nanG Position: 144 (position.label in template: 144.A) Reactivity: 0A Position: 145 (position.label in template: 145.C) Reactivity: 0C Position: 146 (position.label in template: 146.G) Reactivity: nanG Position: 147 (position.label in template: 147.C) Reactivity: 0C Position: 148 (position.label in template: 148.G) Reactivity: nanG Position: 149 (position.label in template: 149.C) Reactivity: nanC Position: 150 (position.label in template: 150.C) Reactivity: nanC Position: 151 (position.label in template: 151.A) Reactivity: nanA Position: 152 (position.label in template: 152.G) Reactivity: nanG Position: 153 (position.label in template: 153.C) Reactivity: nanC Position: 154 (position.label in template: 154.G) Reactivity: nanG Position: 155 (position.label in template: 155.U) Reactivity: nanU Position: 156 (position.label in template: 156.C) Reactivity: nanC Position: 157 (position.label in template: 157.G) Reactivity: nanG Position: 158 (position.label in template: 158.C) Reactivity: nanC Position: 159 (position.label in template: 159.A) Reactivity: nanA Position: 160 (position.label in template: 160.U) Reactivity: nanU Position: 161 (position.label in template: 161.C) Reactivity: nanC Position: 162 (position.label in template: 162.A) Reactivity: nanA Position: 163 (position.label in template: 163.G) Reactivity: nanG Position: 164 (position.label in template: 164.G) Reactivity: nanG Position: 165 (position.label in template: 165.C) Reactivity: nanC Position: 166 (position.label in template: 166.A) Reactivity: nanA Position: 167 (position.label in template: 167.C) Reactivity: nanC Position: 168 (position.label in template: 168.A) Reactivity: nanA Position: 169 (position.label in template: 169.G) Reactivity: nanG Position: 170 (position.label in template: 170.G) Reactivity: nanG Position: 171 (position.label in template: 171.A) Reactivity: nanA Position: 172 (position.label in template: 172.U) Reactivity: nanU Position: 173 (position.label in template: 173.G) Reactivity: nanG Position: 174 (position.label in template: 174.C) Reactivity: nanC Position: 175 (position.label in template: 175.G) Reactivity: nanG Position: 176 (position.label in template: 176.G) Reactivity: nanG Position: 177 (position.label in template: 177.C) Reactivity: nanC Position: 178 (position.label in template: 178.G) Reactivity: nanG Position: 179 (position.label in template: 179.U) Reactivity: nanU Position: 180 (position.label in template: 180.A) Reactivity: nanA Position: 181 (position.label in template: 181.A) Reactivity: nanA Position: 182 (position.label in template: 182.3')3' 10 20 30 50 100 150


nrdA-nrdB-yfaE



Position: 2427-2567, Conformation: #0







Retained alignments:


   NC_007510.1       CGGGA.AAGCGu.uGGAGUGCCGACUCGGGCCG...ACCG.....CAAA.......G....CAUGGGACCCGAG.UAAGc......g--Cu.......gAAGU.G..................................CCG.ACUCG.GAC............CGGccgcaaagcauGGGGCCCGAGU.AAGCGC.UGAagUGCUCACUCGGGU.....CG...ACCGCA.AA.......--GCA..UG....GGACCCGAG.UAAGCGCu.aaA...........................GCGCUAA.CUCGGGU.......CG.-.--A...C.AG.GA..GAU.-
   NC_007951.1       GGAGU.UGGCGg.uAAAGCGCUGACUCUGGUCG...ACCG.....CUGU.......-....-------------.----........---.........----.-g...............................ca---.-----.---............UGG...........--GACCAGAGU.AAGCGC.UGAagCGCUAACUCUGGU.....CG...ACCGCC.GU.......--GCA..UG....GGACCAGAG.UAAGCGCu.gaA...........................GCGCUAA.CUCUGGU.......CG.-.---...A.CA.GG..AGA.C
   NC_007952.1       GGAGU.AGGCGc.uAAAGCACCAACUCCGACCG...ACCG.....CAC-.......-....-------------.----........---.........----.-uu.............................gca---.-----.---............UGG...........--GGUCGGAGU.AAGCGC.UAAagCGCCAACUCCGAC.....CG...ACCGCA.CU.......UGCAU..G-....GGGUCGGAG.UAAGCGCu.aaA...........................GCACCAA.CUCCGACcg...acAC.A.GG-...A.GA.CA..G--.-
   NC_009792.1       GGAUGaCGGCG...UAAACGCCUUAUCCGGCCU...ACGG.....UUGU.......Gc..aGUUGUAGGCCUGA.UAAGc......g--C.........AGCG.-..................................C-C.AUCAG.GCG............UAGg.........uGCUGCCGGAUGaCGGCGU.AAA..CGUCUUAUCCGGC.....CU...ACGGUU.GU......gUCGCU..GU....CGGCCUGAU.AA-GCGC....A...........................GCGC--C.AUCAGGC.......GU.U.GCG...-.--.UG..CUU.A
   NC_010508.1       CGAGU.AGGCGc.uGAAGCGCUAACCCCGACCG...ACAG.....----.......-....-------------.----........---.........----.-cga............................ugc---.-----.---............AUG...........-GGGUCCAAGU.AAGCGC.UAAagCGCCAACUCGGAC.....CG...ACAGCG.AU.......GCAUG..G-....-GACCCCAG.UAAGCGCu.aaA...........................GCGCUAA.CUGGGGA.......UC.-.--G...A.CA.GG..AGA.C
   NC_010676.1       GCAGU.AAGCGc.uAAAGCGCUAACUGCGGUCG...ACCG.....CUU-.......-....-------------.----........---.........----.-ug..............................ca---.-----.---............UGG...........--GACCAGAGU.AAGCGC.UAAagCGCUAACUCUGAU.....CG...ACCGCU.GU.......GCAUG..--....GGACAGCAG.UAAGCGCu.aaA...........................GCGCUAA.CUGCUGU.......--.C.GAC...A.AA.GG..AGA.C
   NC_010681.1       GGAGU.AAGCGc.uAAAGCGCCAACUCCGAUCG...ACCG.....----.......-....-------------.----........---.........----.-ccu...........................ugca---.-----.---............UG-...........-GGAUCGGAGUaAGGCGC.UAAagCGCCAACUCCGAU.....CG...ACCGCC.CU.......GCGUG..--....GGAUCGGAG.UAAGCGCu.aaA...........................GCGCCAA.CUCCGAU.......--.C.GAC...A.GA.GG..AGA.C
   NC_014119.1       AGAGU.AAGCGc.uAAAGCGCCAACUCUGGUCG...GCG-.....----.......-....-------------.----........---.........----.-caacua.....................cguugca---.-----.---............-UG...........-GGACCAGAGU.AAGCGC.UAAagCGCCAACUCUGGU.....CG...ACACAA.CUa....cgUUGCA..UG....GGACCAGAG.UAAGCGCu.aaA...........................GCGCCAA.CUCUGGU.......CG.A.CAC...-.-A.GG..AGA.C
   NZ_AP019007.1     GGGUG.--GCG...CUCAUGCU-UACCCGGCCU...ACGG.....UUCG.......A....-------------.----........---.........----.-gu..............................cg---.-----.---............CUG...........-UUGCCGGGUG.--GCGC.UCA..UGCU-UACCCGGC.....CU...ACGGUU.CGa.....gCCGUU..GU....AGGCCCGGU.AAGGCG-....-...........................UCGCCGCcACCGGGC......aAC.A.AGA...C.UA.CC..UGA.A
   NZ_AP022547.1     GGGUUgCGGCG...UAAACGCCUUACCCGGGCU...ACCGgacca----ac..agcA....CCCGUAGCCCUGC.UAAGc.....gc---.........----aG..................................CGCgAGCAG.GGG...........aUGU...........UUUCCCGGGUUgCGGCGU.UAA..CGCCUUCCCCGGG.....CU...ACCGGAcCAgu...acCGCCA..GU....AGCCCUGCU.AA-GCGC....A...........................GCGCG--.AGCAGGG.......GA.U.GUU...U.UA.UA..---.-
   NZ_AP024955.1     GGAGU.AAGCGc.uAAAGCGCCAACUCCGGUCG...ACGC.....AAAA.......A....-------------.----.......a---.........----uC..................................UGC.-----.---............AUG...........-GGACCGGAGU.AAGCGC.UAAagCGCUAACUCCGGU.....CG...ACGCAA.AA.......AUCUGcaUG....GGACCGGAG.UAAGCGCu.aaA...........................GCGCUAA.CUCCGGU.......CGaC.ACA...G.GA.GU..CGA.C
   NZ_CP008781.1     AGAGU.AAGCGc.uGAAGCGCUAUCUCUGGUCG...ACCG.....CGA-.......-....-------------.----........---.........----.-gg..............................ca---.-----.---............CGG...........--GACCAGAGU.AAGCGC.UAAagCGCUAACUCUGGU.....CG...ACCGCA.AA.......--GCA..UG....GGACCAGAG.UAAGCGCu.aaA...........................GCGCUAA.CUCUGGU.......CG.-.--A...-.-C.AG..GAA.C
   NZ_CP008782.1     AGAGU.AAGUGc.uCAAGCGCCAACUCUGGUCG...ACCG.....CGAA.......G....CAUGGGACCAGAG.UAAGc......g--Cu.......aAAGC.G..................................CCA.ACUCU.GGUcgacc.gcgaag---c........auGGGACCAGAGU.AAGCGC.UAAagCGCUAACUCUGGU.....CG...ACCGCG.AA.......--GCA..UG....GGACCAGAG.UAAGCGCu.aaA...........................GCGCUAA.CUCUGGU.......CG.-.--A...-.CA.GA..GGA.G
   NZ_CP009555.1     GGGGU.AAGCGcuuAAAGCGCUAAUUUUGGUCG...ACCG.....CA--.......-....-------------.----........---.........----.-aa.............................gca---.-----.---............UG-...........-GGAUCGGAGU.AAGCGC.UAAagCGCUAACUUUGGU.....CG...ACCGCA.AA.......--GCA..UG....GGACCAGAG.UAAGCGCu.aaA...........................GCGCUAA.CUCUGGU.......CG.-.--A...C.AC.A-..GGAa-
   NZ_CP009556.1     AGAGU.AAGCGc.uGAAGUGCUAGCUCGGGUCG...ACCG.....CA--.......-....-------------.----........---.........----.-aa.............................gca---.-----.---............UG-...........-GGACCAGAGU.AAGCGC.UAAagCGCUAACUCUGGU.....CG...ACCGCG.AA.......--GCA..UG....GGACCAGAG.UAAGCGCu.aaA...........................GCGCUAA.CUCUGGU.......CG.-.--A...-.CA.GA..GGA.G
   NZ_CP009727.1     AGAGU.AAGCGc.uGAAGCGCUAUCUCUGGUCG...ACUG.....CAA-.......-....-------------.----........---.........----.-g................................g---.-----.---............CAU...........GGGACCAGAGU.AAGCGC.UGAagCGCCAACUCUGGU.....CG...ACCGCA.AG.......--GCA..UG....GGACCAGAG.UAAGCGCu.aaA...........................GCGCUAA.CUCUGGUc....gaCA.G.GAA...C.AA.--..---.-
   NZ_CP009795.1     CGAGU.AAGCGc.uAAAGCGCCAACUCGGGCCG...ACAG.....CU--.......-....-------------.----........---.........----.-uu..............................gc---.-----.---............AUG...........-GGGCCCGAGU.AAGCGC.UAAagCGCUAACUCGGGC.....CG...ACAGCU.UU.......--GCA..UG....GGGCCCGAG.UAAGCGCu.aaA...........................GCGCUAA.CUCGGGC.......CG.-.---...A.CA.GG..AGA.C
   NZ_CP010026.1     GGAGUgAAGCGu.uCAAGCGCUAACUCCGGUCG...ACCG.....CAGU.......G....-------------.----........---.........----.-gac...........................ugca---.-----.---............UGG...........--GACCGGAGU.AAGCGC.UAAagCGCUAACUCCGGU.....CG...ACCGCA.GUg....gaCUGCA..UG....GGACCGGAG.UAAGCGCu.aaA...........................GCGCUAA.CUCCGGU.......CG.-.---...A.CA.AG..GGA.G
   NZ_CP011503.1     GGAGU.AGGCGc.uGAAGCGCCAACUCCGACCAuucACGG.....CAUG.......G....------GGCCCGAgUAAGc......g--Cu.......aAAGC.G..................................CCAaGUCGG.GCCga.......ccgCCG..........aGGGGUUGGAGU.AGGCGC.UGAagCGCCAACUCCGAC.....CA...UCCACG.GC.......A----..UG....GGGCCCGAG.UAAGCGCu.aaA...........................GCGCUAA.CUCGGGC.......CG.-.--A...C.--.-A..GGA.G
   NZ_CP011602.1     GGAUG.CGGCG...AAAACGUCUUAUCCGGGCU...ACG-.....---G.......U....UCUGUAGCCCUGG.CAAG.......c---.........----gC..................................AGC.GCCGG.GGA............C--...........AUUCCCGGAUG.CGGCGU.AAC..CGCCUUAUCCGGG.....CU...ACG---.AU.......--UUU..GU....AGCCCCGGC.AA-GCGU....A...........................GCGC--C.GCCGGGG.......AC.A.GUU...A.UC.AG..-GC.A
   NZ_CP012257.1     GGCGG.GUGCG...C-UGCGCU-UACCCGCCCU...ACGG.....UUAA.......U....------------G.GAAG........GCU.........UUGU.G..................................UUA.U----.---............CC-...........AG-GGCGGGUA.A-GCGC.CAG..CGCACCCGCCAGU.....CC...CAGAAU.UGa....acCUCUC..GU....AGGGCGGGU.AA-GCGC...cA...........................GCGC---.ACCCGCC.......AU.U.CAU...C.CA.CU..CCC.G
   NZ_CP012748.1     UGAGU.AAGCGc.uAAAGCGCUAACUCUCGUCG...ACAG.....----.......-....-------------.----........---.........----.-ccu............................ugc---.-----.---............AUG...........-GGACGUGAGU.AAGCGC.UAAagCGCUAACUCUCGU.....CG...ACAGCC.UU.......GCAU-..-G....GGACGAGAG.UAAGCGCu.aaA...........................GCGCUAA.CUCUCGU.......C-.-.GAC...A.CA.GG..AGA.C
   NZ_CP012871.1     GGAU-.-GGCG...CUGACGCU-UAUCCGGCCU...ACGG.....UGAA.......C....U------------.----........---.........----.-cug............................cuu---.-----.---............UUG...........UAGGCCGGAUG.--GCGC.UGA..CGCUU-AUCCGGC.....CU...ACGGUG.AAcu..cugCUUUU..GU....AGGCCGGAU.AAGGUGC...uU...........................GCACCGCcAUCCGGC.......UU.-.---...U.UU.UU..CGC.A
   NZ_CP013365.1     GGACU.AAGCGc.uAAAGCGCCAAGUCCAGUCG...ACCG.....----.......-....-------------.----........---.........----.-cga...........................agca---.-----.---............UG-...........-GAACCGGACC.AAGCGC.UGAagCGCCAAGUCCGGU.....CG...ACCGCG.AA.......--GCA..UG....GGACCGGAC.UAAGCGCu.aaA...........................GCGCCAA.GUCCGGU.......CG.-.--A...C.-A.AA..GGA.A
   NZ_CP013366.1     AGAGU.AGGCGg.uAAAGCGCUAACUCUGGUCG...ACCG.....----.......-....-------------.----........---.........----.-cga...........................agca---.-----.---............UG-...........-GGACCAGAGU.AAGCGC.UAAagCGCUAACUCUGGU.....CG...ACCGCA.AA.......--GCA..UG....GGACCAGAG.UAAGCGCu.gaA...........................GCGCUAA.CUCUGGUcg...ac--.-.-CGcaaA.GC.AU..G--.-
   NZ_CP013388.1     CGAGU.AAGCGc.uAAAGCGCUAACUCUGGUCG...AGCG.....CAAG.......G....CAUGGGGCCAGAG.UAAGc......g--Cu.......aAAGC.G..................................CUA.ACUCU.GGUcgacc.gcaaggCAU...........GGGACCCGAGU.AAGCGC.UAAagCGCUAACUCUGGU.....CG...ACUGCA.AA.......G--CA..UG....GGACCCGAG.UAAGCGCu.aaA...........................GCGCUAA.CUCUGGU.......CG.A.CAG...A.GG.AG..AG-.-
   NZ_CP013389.1     GGAGU.AAGCGc.uGAAGCGCCAACUCCGGUCG...ACCG.....CA--.......-....-------------.----........---.........----.-aa.............................gca---.-----.---............UG-...........-GGACCGGAGU.AAGCGC.UGAagCGCUAACUCCGGU.....CG...ACCGCA.AA.......--GCA..UG....GGACCGGAG.UAAGCGCu.gaA...........................GCGCUAA.CUCCGGU.......CG.-.---...A.CA.GG..AGC.C
   NZ_CP013401.1     UGAGU.AAGCGc.uGAAGCGCUAACUCGGACCG...ACC-.....----.......-....-------------.----........---.........----.-gc.............................cgu---.-----.---............-G-...........-GGGGUGGAGU.AAGCGC.UGAagCGCUAACUCCACC.....CA...GUCACG.CC.......AU---..-G....GGACCAGAG.UAAGCGCu.aaA...........................GCGCUAA.CUCUGGU.......CG.A.CA-...G.G-.-A..GAC.A
   NZ_CP013411.1     AGAGC.AAGCGc.uAAAGCGCUAACUCUGGUCG...ACCG.....CAAA.......G....CAUGGGACCAGAG.UAAGc......g--Cu.......aAAGC.G..................................CUA.ACUCU.GGUcgacc.gcaaagCAU...........GGGACCAGAGC.AAGCGC.UAAagCGCUAACUCUGGU.....CG...ACCGCA.AA.......--GCA..UG....GGACCAGAG.UAAGCGCu.aaA...........................GCGCUAA.CUCUGGU.......CG.-.--A...-.CA.CA..GGA.C
   NZ_CP013413.1     GGGGU.AGGCGc.uGAAGCGCCAACGCCGAUCG...ACGG.....CU--.......-....-------------.----........---.........----.-uu..............................gc---.-----.---............AUG...........-GGAUCGGAGU.AAGCGC.UAAagCGCUAACUCCGAU.....CG...ACAGCU.UU.......GC--A..UG....GGAUCGGAG.UAAGCGCu.aaA...........................GCGCUAA.CUCCGAU.......CG.A.C-A...G.GA.GA..CGA.C
   NZ_CP013424.1     UGAAC.AAGCGc.uAAAGCGCUAACUCUGGUCG...ACCG.....----.......-....-------------.----........---.........----.-cgg...........................cgca---.-----.---............UG-...........-GGACCCGAGU.AAGCGC.UAAagCGCUAACUCUGGU.....CG...ACUGCGgUG.......CAUG-..--....GGACCCGAG.UAAGCGCu.aaA...........................GCGCUAA.CUCUGGU.......--.-.CGA...C.AC.GG..AGA.A
   NZ_CP013450.1     -GGGAgCGGCA...CACGCGCCGGUUCUGAUUG...A-UG.....GUGG.......A....GCAGGGAUCUGAG.UAAG.......c-ACu.......aAAGC.G..................................CUA.ACUCA.GAUcgacc.gcuaugCAU...........GGGACCAGAGC.AAGCGC.UGAagCGCCAACUCUGGU.....CG...ACCGCG.AA.......--GCA..UG....GGAUCUGAG.UAAGCGCu.aaA...........................GCGCUAA.CUCAGAU.......CG.-.--A...C.-A.--..GGA.G
   NZ_CP013459.1     GGACC.AGGCGc.uAAAGUGCCGACUCCGGCCG...ACUG.....CUC-.......-....-------------.----........---.........----.-u................................g---.-----.---............CAU...........GAGGCCGGACC.AGGCGC.UAAagCGCCAAGUCCGGC.....CG...ACUGCU.CU.......GC--A..UG....GGGCCGGAC.UAGGCGCu.aaA...........................GCGCCAA.GUCCGGC.......CG.A.CA-...G.GAgGG..AGA.C
   NZ_CP013461.1     GGAGU.AAGUGc.gGAUGCACCGGCUUCGGUCG...ACCG.....CA--.......-....-------------.----........---.........----.-aa.............................gca---.-----.---............UG-...........-GGACCGGAGU.AAGCGC.UAAagCGCCAACUCCGGU.....CG...ACCGCA.AA.......GCA--..UG....GGACCGGAG.UAAGCGCu.aaA...........................GCGCCAA.CUCCGGU.......CG.A.--C...A.CA.GG..AGA.C
   NZ_CP013940.1     GGGUG.CGC--...---AC-GCUUACCCGCCCU...ACGG.....GACA.......G....G------------.----........---.........----.-uug............................guu---.-----.---............GCG...........AAUGGCGGGUG.CGC---.---..ACGCUUACCCGCC.....CU...ACGGGA.CAgguugguUGUAU..GU....AGGGCGGGU.AA-GCGC....A...........................GCGC---.ACCCGCC......gAU.G.UAA...U.GC.AC.uCGC.C
   NZ_CP017184.1     GGGUGgCGGCU...---UCGCCUUACCCGGCCU...AC--.....----.......-....-------------.-AAG........GUGc.......gGUGU.U..................................CGC.-----.---............---...........GUUGCCGGGUGgCGGCUU.---..CGCCUUACCCGGC.....CU...ACAGGU.GCg.....cUAUUC..GU....AGGCCGGGU.AA-GCGC....A...........................GCGC--C.ACCCGGC......gAC.A.GCG...G.CC.UC..AGU.U
   NZ_CP020398.1     GGAGA.-AGCGc.uCAAGCGCCAACUCGGGACG...ACAG.....CU--.......-....-------------.----........---.........----.-uu..............................gc---.-----.---............AUG...........-GGGCCCGAGU.AAGCGC.UAAagCGCUAACUCGGGC.....CG...ACGCUU.UG.......CAUG-..--....GGGCCCGAG.UAAGCGCu.aaA...........................GCGCUAA.CUCGGGC.......--.-.CGA...C.AC.GG..AGA.C
   NZ_CP020737.1     GGAGU.AAGCGc.uAAAGCGCUAACUUCGGUCG...ACCG.....----.......-....-------------.----........---.........----.-cga...........................agca---.-----.---............UG-...........-GGACCGGAGU.AAGCGC.UAAagCGCUAACUUCGGU.....CG...ACCGCG.AA.......--GCA..UG....GGACCGAAG.UAAGCGCu.aaA...........................GCGCUAA.CUUCGGU.......CG.-.--A...-.CA.GG..AGA.C
   NZ_CP022221.1     GGAUG.GAGCG...C--AAGCGUAAUCCGGG--...----.....----.......-....-------------.----........---.........----.-aaucauuccg..............cgaacgcaaa---.-----.---............---...........--UCCCGGAUU.GCGCUU.---..CGCUCCAUCCGGG.....CU...ACGGCA.GU.......--AUC..GU....AGGGUGGGC.AAAGCGA....A...........................GCGU---.GCCCACC.......AU.U.UCA...-.-U.UG..CGU.G
   NZ_CP022989.1     GGACU.AAGCGc.cAAAGCGCCAAGUCCGGUCG...ACAG.....CU--.......-....-------------.----........---.........----.-uu..............................gc---.-----.---............AUG...........-GGAUCGGACC.AAGCGC.CAAagCGCCAAGUCCGGU.....CG...ACAGCU.UU.......--GCA..UG....GGAUCGGAC.UAAGCGCc.aaA...........................GCGCCAC.GUCCGAU.......CG.-.---...A.CA.GG..AGC.C
   NZ_CP024934.1     GGACU.AAGCGc.uGAAGCGCUAACUCCAGUCG...ACCG.....CU--.......-....-------------.----........---.........----.-ag..............................ca---.-----.---............UGG...........--GACCGGACU.AAGCGC.UGAagCGCUAACUCCAGU.....CG...ACCGCU.AG.......CAUG-..--....GGACUGGAG.UAAGCGCu.gaA...........................GCGCUAA.CUCCAGU.......--.-.CGA...C.ACaGG..AGA.C
   NZ_CP024941.1     AGAGU.AAGCGc.uAAAGCGCCAACUCUGAUCG...ACCG.....C---.......-....-------------.----........---.........----.-guu............................gca---.-----.---............UG-...........-GGAUCAGAGU.AAGCGC.UAAagCGCCAACUCUGAU.....CG...ACCGCG.UU.......GCAU-..-G....GGAUCAGAG.UAAGCGCu.aaA...........................GCGCCAA.CUCUGAU.......C-.-.GAC...A.CA.GG..AGA.C
   NZ_CP024942.1     GGCGU.AAGCGu.uAAAGCACUAACUCCGAUCG...ACAC.....G---.......-....-------------.----........---.........----.-uu.............................ggu---.-----.---............-U-...........GGGACCGGAGU.AAACGC.UCAagCGCUAACUCCGAU.....CG...ACACCG.CU.......--GGU..UG....GGACCGGAG.UAAGCGCu.aaA...........................GCGCUAA.CUCCGAU.......CG.A.CAC...A.GG.AG..AG-.-
   NZ_CP026105.1     AGCAUaAGGCGc.uAAAGCGCCAACGCUGGUCG...ACCG.....C---.......-....-------------.----........---.........----.-gcu............................gca---.-----.---............UG-...........-GGACCAGCGU.AAGCGC.UAAagCGCUAACGCUGGU.....CG...ACCGCG.UU.......GCAUG..--....GGACCAGCG.UAAGCGCu.aaA...........................GCGCUAA.CGCUGGU.......--.C.GAC...A.AA.GG..AGA.C
   NZ_CP026106.1     AGAGUaAGGCGc.uAAAGCGCCAACUCUGGGCC...A---.....----.......-....-------------.----........---.........----.-acuc.........................gccaa---.-----.---............---...........GGGACCGGAGU.AAGCGC.UAAagCGCUAACUCCGGC.....CG...ACUUGC.C-.......----A..UG....GGACCAGAGuAAGGCGCu.aaA...........................GCGCCAA.CUCUGGU.......CG.-.--A...C.-A.GG..AGA.C
   NZ_CP027107.1     GGGUG.CGGCU...---GCGCCUUACCCGGCCU...ACGG.....GAGG.......A....-------------.----........GUG........gUUUG.U..................................---.-----.---............CUG...........GGGGCCGGGUG.CGGCUG.---..CGCCUUACCCGGC.....CU...ACGGGG.GA.......AAUGG..UU....GG-------.-------....-ccugagugccguuacuucgacagaucc-------.-------.......AG.C.UGA...U.AC.AC..CGC.A
   NZ_CP031466.1     GGAGC.AAGCGc.uGAAGCGCUAACUCCGGUCG...ACCG.....CG--.......-....-------------.----........---.........----.-acggg........................cugca---.-----.---............UG-...........-GGACCGGAGU.AAGCGC.UAAagCGCUAACUCCGGU.....CG...ACCGCG.GCg....ggCCGCA..UG....GGACCGGAG.UAAGCGCu.aaA...........................GCGCUAA.CUCCGGUcg...acAA.A.GCA...G.GC.GA..G--.-
   NZ_CP031467.1     CGAGU.AGGCGc.uAAAGCGCUAACUCGGGUCG...ACUG.....C---.......-....-------------.----........---.........----.-gu..............................ug---.-----.---............CAU...........GGGACCCGAGU.AGGCGC.UAAagCGCUAACUCGGGU.....CG...ACUGCG.UU.......GCAUG..--....GGACCCGAG.UAAGCGCu.aaA...........................GCGCUAA.CUCGGGU.......C-.-.GAC...A.CA.GG..AGA.C
   NZ_CP033744.1     UGAUG.GCGCU...---GCGCU-UAUCAGGCCU...ACGAcu.gcGUGU.......G....UUUGUAGGCCGGA.UAAG........GCG.........UUAG.C..................................CGC.AUCCG.GCAugu.....ugcaCUG..........aUUUGCCUGAUG.--GCGC.U--..GCGCUUAUCAGGC.....CU...ACGACU.GCg....ugUGUUU..GU....AGGCCGGAU.AAGGC--g.uuA...........................--GCCGC.AUCCGGC.......AU.G.AUG..aG.CA.GAguUGU.-
   NZ_CP033844.1     GGGUCgCGGCG...UAAACGCCUUACCCGGGCU...ACCG.....CC--.......-....-------------.----........---.........----.-ccgcgguauagcggugaacggaaacccuuuacac---.-----.---............---...........CUUCCCGGAGG.CGGCGCgUUG..CGCCUGUCCG-GG.....CU...ACUACC.--.......----C..GU....AGCCCCGGU.AA-GCGC....A...........................GCGCG--.ACCGGGG.......AG.G.ACA...-.-A.CC..GGU.U
   NZ_CP037864.1     GGAUGgCGGCG...UAAACGCCUUAUCCGGCCU...ACAG.....GCCC.......-....UGAGUAGGCCUGA.UAAGc.....cc---.........AGCG.-..................................C-C.AUCAG.GCA............CUGcgug...guacUGUGCCGGAUAgCGGCGU.AAA..CGCCUUAUCCGAC.....CU...ACGGGU.CC.......UG--G..GU....AGGCCUGAU.AA-GCGC....A...........................GCGC--C.AUCAGGC.......AC.UgCCU...G.AU.GG..CGA.C
   NZ_CP041247.1     GGAUGgCGGCG...CGAGCGCCUUAUCCGGGCU...ACU-.....AUCC.......U....CAUGUAGCCCCGG.UAAGcgcagcgc--G.........----.-accgggggguauuu......ucgggugcggugggCCC.CCCGGuGGU............GGG...........AGCCCCGGAUGgCGGCGC.GAG..CGCCUUAUCCGGG.....CU...ACCAGU.CU.......--CAU..GU....AGCCCCGGU.AA-GCGC....A...........................GCGCG--.ACCGGGG.......GG.A.UAU...U.UU.CG..GGU.G
   NZ_CP041925.1     GGAUAgCGGCG..cACAGCGCCUUAUCCGGGCU...ACGG.....UUCGgu..auu-c.ggUUGGUAGCCCCGG.UAAG........CGU.........AAGC.G..................................C-C.ACCGG.GGG............AGG...........AUUCCCGGAUAgCGGCAC.AUA.gCGCCUUAUCCGGG.....CU...ACGGUU.CGgua.uucGGUCG..GU....AGCCCCGGU.AA-GCGU...aA...........................GCGC--C.ACCGGGGag...ggGC.C.GGA...U.AU.CG..GGU.A
   NZ_CP044098.1     GGAUG.CGGCG...UAAACGCCUUAUCCGGCCU...ACAG.....GUUUcacuguuU....ACCGUAGGCCCGA.UAAGu......g---.........U---cG..................................UGC.AUCGG.GCA............C--...........AUCGCCGGAUG.CGGCGU.AAA..CGCCUUAUCCGGC.....CU...ACAGGU.UUcgc.uguUUACC..GU....AGGCCCAAU.AA-GCGU....C...........................GUG---C.AUCGGGC.......AC.A.UCG...-.-C.--..---.-
   NZ_CP045235.1     GGAGU.AAGCGc.uAAAGCACUAACUCUGAUCG...ACCG.....CGAA.......G....CAUGGGAUCAGAG.UAAGc......g--Cu.......aAAGC.G..................................CUA.ACUCU.GAUcgacc.gcgaag---c........auGGGACCAGAGU.AAGUGC.UAAagCACUAACUCUGGU.....CG...ACCGCG.AA.......GC--A..UG....GGAUCAGAG.UAAGCGCu.aaA...........................GCGCUAA.CUCUGAU.......CG.A.--C...A.CA.GG..AGA.C
   NZ_CP045236.1     CGAGC.AAGCGc.uAAAACACCAACUCGGGUCG...ACCG.....----.......-....-------------.----........---.........----.-cga...........................agca---.-----.---............UG-...........-GGACCAGAGU.AAGCGC.UAAagCGCUAACUCUGGU.....CG...ACCGCG.AA.......--GCA..UG....GGACCAGAG.UAAGCGCu.aaA...........................GCGCUAA.CUCUGGU.......CG.-.--A...-.CA.GG..AGA.C
   NZ_CP045783.1     GGAUAgCGGCU...G--GCGCCUUAUCCGGGCU...ACCC.....GUCAgcc.ccgG....UUUGUAGCCCCGG.UAAG.......c--G.........CAGC.-..................................GGC.ACCGG.GGA............GAU...........AUUCCCGGAUAgCGGCUG.G--..CGCCUUACCCGGG.....CU...ACCCGU.CAgc..uccGGUUU..GU....AGCCCCGGU.AA-GCGC....A...........................GCGC--C.ACCGGGG.......AG.A.UAU...U.CC.CG..GAU.A
   NZ_CP045845.1     GGGGG.CGGCG...UAAACGCCUCGCCCGGGCU...ACAG.....----.......-....-------------.----........-GA.........----.-ca.............................gau---.-----.---............GUG...........UAUCCCGGGUG.CGACGU.AAA..UGCCUUGGCCGGG.....CU...ACAGGU.UA.......GG---..-U....AGCCCGGCC.AA-GCGC....A...........................GCGC---.CGCCGGG.......AA.U.CACu.cU.GC.UC..U--.-
   NZ_CP046914.1     AGAGU.AAGCGc.uAAAGCGCCAACUCUGGUCG...ACAC.....----.......-....-----------GC.UAACu......c--G.........----.-gg..............................ucGAC.AGCUU.UGC............AUG...........-GGACCCGAGU.AAGCAC.UGAagUGCUAACUCGGGU.....CG...ACAGCU.UU.......--GCA..UG....GGACCAGAG.UAAGCGCu.aaA...........................GCGCUAA.CUCUGGU.......CG.-.---...A.CA.GG..AGA.C
   NZ_CP054058.1     CGGUGgCGGCC...---UUGCCUUACCGGGCCU...ACAU.....GGCG.......U....-------------.----........---.........----.-guuug........................gcuga---.-----.---............ACG..........cAUUGCCCGGUGgCGGCGC.AA-..-G-CUUGCCGGGC.....CU...ACGGAA.UG......uGCCAU..GU....AGGCCCGGC.AA---GCu..u-...........................GCGC--C.GCCGGGC.......AC.A.UUC...C.AC.CG..CAC.U
   NZ_CP055055.1     GGAUG.CGGCG...UAAACGCCUUAUCCGGCCU...ACGG.....CUCG.......G....UUUGUAGGCCUGA.UAAGa.....cg---cg.....ccAGCG.U..................................CGC.CUCAG.GCU............CCG...........GGUGCCGGAUG.CAGCGU.GAA..CGCCUUAUCCGGC.....CU...ACGGCU.CG.......GAUUU..GU....AGGCCUGAU.AAGACGCg.ccA...........................GCGUCGC.AUCAGGC.......AC.A.GGA...U.GC.GG..CGU.A
   NZ_CP055292.1     GGAUG.CGGCG...UAAACGCCUUAUCCGCCCU...ACAUg...uGCAA.......U....CCUCCUGGCCGGA.UAAAac....gc---gg.....caAGC-gU..................................UGC.AUCCG.GCAacug....caccGCGc.........cACUGGCGGAUG.CGGCGU.GAA..CGCCUUAUCCGCC.....CU...ACAUGU.GC......aAUCCC..CC....AGGCCGGAU.AAAACGCggcaA...........................GCGUCGC.AUCCGGC.......GU.U.ACC...A.CCgGG..CGU.A
   NZ_CP060412.1     GGAUG.AAGCG...CA-GCGC--AAUCCGGGAU...G---.....----.......-....------GCCCUGC.UAUGac...gca---uaagccgugACG-.A..................................UGA.CGCAG.GAU............---...........UCCCCCGGAUU.--GCGC.UU-..CGCUUCAUCCGGG.....CC...ACACGA.CGcc...aaUCACC..GU....AGCCCGGAU.GAAGCGC....A...........................GCGC--A.AUCCGGG.......AU.G.GCC..uU.GC.GA..C--.-
   NZ_CP060820.1     GGAUG.GGGCG...-----------------UU...ACGU.....AACG.......U...uUGCGUAGCCCGGG.UAAG........GCC........gAAGG.C..................................CGC.ACCCG.GGG............UCG...........AAGCU------.------.---..CGCCGCAGCCG--.....-U...GCCGAA.UA.......GCCGA..GU....AGCCCGGGU.AA-GCGC....A...........................GCGC---.ACCCGGGuc...ggGC.U.UGG...-.-C.GG..GGC.A
   NZ_CP065686.1     UGGGUgCGGGGg.cGAAGCGCCAACUCUGGUCG...ACAG.....CU--.......-....-------------.----........---.........----.-uu..............................gc---.-----.---............AUG...........-GGACCCGAGU.AAGCGC.UAAagCGCUAACUCUGGU.....CG...ACCGCA.AA.......G--CA..UG....GGACCAGAG.UAAGCGCu.aaA...........................GCGCUAA.CUCUGGUc.....gAC.A.GGA...U.GA.--..---.-
   NZ_CP065687.1     GGAGUaAAGCGc.uGAAGCGCUAACUCUGGUCG...ACCG.....----.......-....-------------.----........---.........----.-cga...........................agca---.-----.---............UG-...........-GGACCAGAGU.AAGCGC.UGAagCGCUAACUCUGGU.....CG...ACCGCA.AA.......--GCA..UG....GGACCAGAG.UAAGCGCu.aaA...........................GCGCUAA.CUCUGGU.......CG.-.--A...-.CA.AA..GGA.G
   NZ_CP065838.1     GGAUAgCGGCU...G--GCGCCUUAUCCGGGCU...ACCC.....AUCAgcu.ccgG....UUUGUAGCCCCGG.UAAGc......g--C.........AGCG.-..................................C-C.ACCGG.GGA............GAU...........AUUUCCGGAUAgCGGCUG.G--..CGCCUUAUCCGGGcuacuCG...UCAGCU.CC.......GGUUU..GU....AACCCCGGU.AA-GCGC....A...........................GCGC--C.ACCGGGG......aAC.A.GGG...A.UU.AC..UGA.C
   NZ_CP066037.1     UGAGU.AAGCGc.uAAAGCGCCAACUCUGGUCG...ACCG.....----.......-....-------------.----........---.........----.-cga...........................agca---.-----.---............UG-...........-GGACCAGAGU.AAGUGC.UAAagCGCCAACUCUGGG....uCG...ACCGCG.AA.......--GCA..UG....GGGCCAGAG.UAAGCGCu.aaA...........................GCGCCAA.CUCUGGCc....gaCA.G.GAG...A.UA.U-..---.-
   NZ_CP066075.1     GGAGU.AGGCGc.uAAAGCGCCAACUCCCACCG...ACCG.....CGAU.......A....-------------.----........---.........----.-aaa............................cug--C.A----.---............UGG...........--GGUGGGAGU.AGGCGC.UAAagCGCCAACUCCCAC.....CG...ACCGCG.AUaa...aaCUGCA..UG....GGGCGGGAG.UAGGCACu.aaA...........................GCGCCAA.CUCCCAC.......CG.A.CCGc.gA.UA.AA..---.-
   NZ_CP066076.1     GCAGU.CAGCGc.uGAAGCGCCAACUCCGGUCG...ACCG.....CUU-.......-....-------------.----........---.........----.-ug..............................ca---.-----.---............UGG...........--GACCCGAGU.AAGCGC.UGAagCGCUAACUUCGGU.....CG...ACCGCU.UU......gCAUG-..--....GGACCCGAG.UAAGCGCu.gaA...........................GCGCUAA.CUCGGGU.......--.-.CGA...C.AA.GG..AGA.C
   NZ_CP070290.1     GGAUG.CGGCG...UAAACGCCUUAUCCGGCCU...ACGG.....UUCAa.....a-gccgUUUGUAGUCCCGA.UAAGa......c--Aca....ccaGUG-.U..................................CGC.AUCGA.ACA............UCG...........CUUGCCGGAUG.CGGCGU.GAA..CGCCUUAUCCGGC.....CU...GCUGUU.CA.......GAGCC..GUuuguAGGCCCGAU.AAGACGCa.ccA...........................GCGUCGC.AUCGGGC.......AU.C.GUU...U.GC.C-..AGC.A
   NZ_CP077262.1     GGAUGgCGGCG...CAAGCGCCUUAUCCGGCCUa.cAAAGc...uUUGC.......A....CUCGUAGGCUUGA.UAAGc.....gc---.........----aG..................................CGC.AUCAG.GCG............CAU..........cUUCGCCGGAUGgCGGCGC.AAG..CGCCUUAUCCGGC.....CUacaAAGCUU.UG.......CACUC..GU....AGGCCUGAU.AA-GCGC....A...........................GCGC---.AUCAGGC.......AC.-.--U...U.AU.GG..CUU.A
   NZ_CP077392.1     GGGUGgCGGCU...---UCGCCUUACCCGGCCU...ACGG.....GUGC.......G....-------------.----........---.........----.-gu..............................gu---.-----.---............UCG..........uUUUGCCGGGUGgCGGCUU.---..CGCCUUACCCGGC.....CU...ACAGGU.GC......g--CUG..UUc.guAGGCCGGGU.AA-GCGC....A...........................GCGC--C.ACCCGGC.......AA.C.AGC...G.CC.CU..CA-.-
   NZ_CP082833.1     GGAUGgCGGCG...UAAACGCCUUAUCCGGCCU...ACGA....uAAGC.......U....CCUGUAGGCCUGA.UAAGc......g--C.........AGCG.-..................................C-C.AUCAG.GCGg..........a-CG..........uGGCGCCGGAUGgCGGCGU.AAA..CGCCUUAUCCGGC.....CU...ACGAUA.AG.......CUCCU..GU....UUGCCUGAU.AA-GCGC....A...........................GCGC--C.AUCAGGCa.....aAC.A.GGC...C.-G.GA..CAA.A
   NZ_CP083638.1     GGAUG.CGGCG...UGAACGCCUUAUCCGACCU...ACGG.....UACG.......G...aUUUGUAGGCCUGA.UAAGac....gc---g......acAGCG.U..................................CGC.AUCAG.GCG............AUG...........GCUGUCGGAUG.CGGCGU.GAA..CGCCUUAUCCGAC.....CU...ACGGUU.CG.......GGUUU..GU....AGGCCUGAU.AAGACGCg.acA...........................GCGUCGC.AUCAGGCaaugaauGC.A.AAA...CaGC.GA..UGU.A
   NZ_CP084271.1     AGAGUaAGGCGc.uGAAGCGCCAACUCCGGCCG...ACAG.....CU--.......-....-------------.----........---.........----.-uu..............................gc---.-----.---............AUG...........-GGGCCGGAGUaAGGCGC.UAAagCGCCAACUGUGGC.....CG...ACAGCU.UU.......GCAUG..--....GGACCACAGuAAGGCGCu.aaA...........................GCGCCAA.CUGUGGU.......--.C.GAC...A.GC.UU..UGC.A
   NZ_CP084874.1     GGAUAgCGGCG..cGUAGCGCCUUAUCCGGGCU...ACCG....a-AUGuu..acg-a..aAUCGUAGCCCUGC.UAAGc.....gc---.........----aG..................................CGCgAGCAG.GGA............A--...........UGCCCCGGAUGgCGGCGC.GUU.gCGCCUUAUCCGGG.....CU...ACCGAA.UGuu..acgAAACC..GU....AGCCCUGCU.AA-GCGC....A...........................GCGCG--.AGCAGGGa....agAC.G.GAG...U.CU.AU..GCU.A
   NZ_CP087880.1     GGAUGgCGGCG...UAAACGCCUUAUCCGGCCU...ACGG.....UUCG......gU....AAUGUAGGCCCGG.UAAGu......g--C.........AGCG.-..................................C-C.ACCGG.GCAugua...gugcgC--...........CUUGCCGGAUGgCGGCGU.AAA..CGCCUUAUCCGGC.....CU...AUGGUU.CG.......GUAAU..GU....AGGCCCGGU.AA-GCGC....A...........................GCGC--C.ACCGGGC.......AA.G.UUA...G.GC.AC..CCU.G
   NZ_CP091779.1     GGGUGgCGGCU...---UCGCCUUACCCGGCCU...ACAG.....GAUC.......-....-------------.----........---.........----.-gg..............................cg---.-----.---............CUGa........acAUCGCCGGGUGaCGGCUU.---..CGCCUUACCCGGC.....CU...ACGGGAuCG.......AG---..-U....AGGCCCGGU.AA-GCGU....A...........................GCGC--C.ACCGGGC.......GA.U.GA-...C.GC.GG..CUC.A
   NZ_CP093332.1     GGAUG.ACGCU...U--GCGCU-UAUCCGCCCU...ACGA.....AAAC.......C....-------------.----........---.........GAU-.U..................................UGC.-----.---............AUU...........ACUGGCGGAUG.--ACGC.UG-..CGC-UUAUCCGCC.....CU...AUGAAA.UG.......CAGUU..GU....AGGUCGGAU.AA-GCGC...aA...........................GCGU--C.AUCCGAC.......AU.U.ACU...C.-C.AA..CAC.C
   NZ_CP107077.1     GGAUGgCGGCA...UAAAUGCCUUAUCCGGCCU...ACGG.....UUAGcg..cguU....UUUGUAGGCCUGA.UAAGcgc..agc---........g----.-..................................C-C.AUCAG.GCAuuaugccgggcgUUG...........AUUGCCGGAUGgCGGCAU.AAA..UGCCUUAUCCGGC.....CU...ACGGUU.AGcg...cgGUUUU..GU....AGGCCUGAU.AA-GCGC....A...........................GCGC--C.AUCAGGC.......AU.U.GUC..uC.UU.AA..A--.-
   NZ_LR699553.1     AGAGU.AAGCGc.uAAAGCGCUAACUCUGGUCG...ACCG.....CAAU.......A....-------------.----........---.........----.-acu...........................ugca---.-----.---............UGG...........--GACCAGAGU.AAGCGC.UAAagCGCUAACUCUGGU.....CG...ACAUAG.GA.......GGCGA..AG....U--------.--GUCG-....-...........................GCGACG-.-------.......CU.A.CGU...U.U-.--..UGA.C
   NZ_LR699554.1     GGAGU.AAGCGc.uAAAGCGCUAACUCCGACCG...ACCG.....CAAU.......G....-------------.----........---.........----.-acu...........................ugca---.-----.---............UGG...........--GGCCGGAGU.AAGCGC.UAAagCGCUAACUCCGAC.....CG...ACCGCA.AUg....acUUGCA..UG....GGGUCGGAG.UAAGCGCu.aaA...........................GCGCUAA.CUCCGAC.......CG.A.--C...A.CA.GG..AGA.C


   Structure         (((((..((((......((((..((((((((((....(((...........................(((((((.(..(............................................................)...))))).)))............)))...........)).))))))))...))))......)))).))))).........(...(((....((.........(((..((......(((((((...(((((................................)))))...))))))).......)).).))....).)......))).)


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nrdA-nrdB-yfaE



Position: 2427-2567, Conformation: #0







97% 90% 75% 50% Nucleotide present N N N Nucleotide identify E < 0.1 Base-pair covariation E < 0.05 Helix-level covariation 97% 90% 75%

R G R R G C G R C G C Y U C Y G G Y C A C R R C C R G A R G C G Y C G C Y U C Y G G Y C A C R R G R C C G R A G C G C A G C G C Y C G G Y R 5'