nnr-tsaE-amiB-mutL-miaA-hfq-hflX-hflK-hflC



Position: 9443-9582, Conformation: #0







DMS reactivity > 1.0 0.0 0.4 0.7 G/U/No data
Position: 0 (position.label in template: 0.5')5' Position: 1 (position.label in template: 1.U) Reactivity: nanU Position: 2 (position.label in template: 2.A) Reactivity: nanA Position: 3 (position.label in template: 3.G) Reactivity: nanG Position: 4 (position.label in template: 4.A) Reactivity: nanA Position: 5 (position.label in template: 5.C) Reactivity: nanC Position: 6 (position.label in template: 6.C) Reactivity: nanC Position: 7 (position.label in template: 7.A) Reactivity: nanA Position: 8 (position.label in template: 8.G) Reactivity: nanG Position: 9 (position.label in template: 9.A) Reactivity: nanA Position: 10 (position.label in template: 10.U) Reactivity: nanU Position: 11 (position.label in template: 11.G) Reactivity: nanG Position: 12 (position.label in template: 12.C) Reactivity: nanC Position: 13 (position.label in template: 13.U) Reactivity: nanU Position: 14 (position.label in template: 14.G) Reactivity: nanG Position: 15 (position.label in template: 15.A) Reactivity: nanA Position: 16 (position.label in template: 16.A) Reactivity: nanA Position: 17 (position.label in template: 17.A) Reactivity: nanA Position: 18 (position.label in template: 18.G) Reactivity: nanG Position: 19 (position.label in template: 19.G) Reactivity: nanG Position: 20 (position.label in template: 20.U) Reactivity: nanU Position: 21 (position.label in template: 21.G) Reactivity: nanG Position: 22 (position.label in template: 22.G) Reactivity: nanG Position: 23 (position.label in template: 23.U) Reactivity: nanU Position: 24 (position.label in template: 24.A) Reactivity: nanA Position: 25 (position.label in template: 25.A) Reactivity: nanA Position: 26 (position.label in template: 26.C) Reactivity: nanC Position: 27 (position.label in template: 27.G) Reactivity: nanG Position: 28 (position.label in template: 28.C) Reactivity: nanC Position: 29 (position.label in template: 29.C) Reactivity: nanC Position: 30 (position.label in template: 30.C) Reactivity: nanC Position: 31 (position.label in template: 31.C) Reactivity: nanC Position: 32 (position.label in template: 32.U) Reactivity: nanU Position: 33 (position.label in template: 33.G) Reactivity: nanG Position: 34 (position.label in template: 34.C) Reactivity: nanC Position: 35 (position.label in template: 35.G) Reactivity: nanG Position: 36 (position.label in template: 36.G) Reactivity: nanG Position: 37 (position.label in template: 37.C) Reactivity: 1C Position: 38 (position.label in template: 38.G) Reactivity: nanG Position: 39 (position.label in template: 39.A) Reactivity: 0A Position: 40 (position.label in template: 40.A) Reactivity: 0A Position: 41 (position.label in template: 41.G) Reactivity: nanG Position: 42 (position.label in template: 42.A) Reactivity: 0A Position: 43 (position.label in template: 43.G) Reactivity: nanG Position: 44 (position.label in template: 44.C) Reactivity: 0.5C Position: 45 (position.label in template: 45.G) Reactivity: nanG Position: 46 (position.label in template: 46.A) Reactivity: 0.5A Position: 47 (position.label in template: 47.U) Reactivity: nanU Position: 48 (position.label in template: 48.A) Reactivity: 1A Position: 49 (position.label in template: 49.A) Reactivity: 1A Position: 50 (position.label in template: 50.C) Reactivity: 0C Position: 51 (position.label in template: 51.G) Reactivity: nanG Position: 52 (position.label in template: 52.G) Reactivity: nanG Position: 53 (position.label in template: 53.U) Reactivity: nanU Position: 54 (position.label in template: 54.G) Reactivity: nanG Position: 55 (position.label in template: 55.C) Reactivity: 0C Position: 56 (position.label in template: 56.C) Reactivity: 0C Position: 57 (position.label in template: 57.A) Reactivity: 0A Position: 58 (position.label in template: 58.G) Reactivity: nanG Position: 59 (position.label in template: 59.C) Reactivity: 0C Position: 60 (position.label in template: 60.A) Reactivity: 1A Position: 61 (position.label in template: 61.A) Reactivity: 1A Position: 62 (position.label in template: 62.U) Reactivity: nanU Position: 63 (position.label in template: 63.C) Reactivity: 1C Position: 64 (position.label in template: 64.U) Reactivity: nanU Position: 65 (position.label in template: 65.G) Reactivity: nanG Position: 66 (position.label in template: 66.C) Reactivity: 0C Position: 67 (position.label in template: 67.U) Reactivity: nanU Position: 68 (position.label in template: 68.G) Reactivity: nanG Position: 69 (position.label in template: 69.C) Reactivity: 1C Position: 70 (position.label in template: 70.G) Reactivity: nanG Position: 71 (position.label in template: 71.U) Reactivity: nanU Position: 72 (position.label in template: 72.C) Reactivity: 0C Position: 73 (position.label in template: 73.U) Reactivity: nanU Position: 74 (position.label in template: 74.G) Reactivity: nanG Position: 75 (position.label in template: 75.C) Reactivity: 0C Position: 76 (position.label in template: 76.C) Reactivity: 0C Position: 77 (position.label in template: 77.G) Reactivity: nanG Position: 78 (position.label in template: 78.C) Reactivity: 0C Position: 79 (position.label in template: 79.C) Reactivity: 0C Position: 80 (position.label in template: 80.A) Reactivity: 1A Position: 81 (position.label in template: 81.G) Reactivity: nanG Position: 82 (position.label in template: 82.C) Reactivity: 0.5C Position: 83 (position.label in template: 83.C) Reactivity: 0C Position: 84 (position.label in template: 84.U) Reactivity: nanU Position: 85 (position.label in template: 85.C) Reactivity: 0C Position: 86 (position.label in template: 86.U) Reactivity: nanU Position: 87 (position.label in template: 87.U) Reactivity: nanU Position: 88 (position.label in template: 88.C) Reactivity: 0C Position: 89 (position.label in template: 89.C) Reactivity: 0C Position: 90 (position.label in template: 90.U) Reactivity: nanU Position: 91 (position.label in template: 91.C) Reactivity: 0C Position: 92 (position.label in template: 92.C) Reactivity: 0C Position: 93 (position.label in template: 93.A) Reactivity: 0A Position: 94 (position.label in template: 94.C) Reactivity: 0C Position: 95 (position.label in template: 95.A) Reactivity: 1A Position: 96 (position.label in template: 96.A) Reactivity: 1A Position: 97 (position.label in template: 97.C) Reactivity: 1C Position: 98 (position.label in template: 98.C) Reactivity: 0.5C Position: 99 (position.label in template: 99.A) Reactivity: 1A Position: 100 (position.label in template: 100.G) Reactivity: nanG Position: 101 (position.label in template: 101.U) Reactivity: nanU Position: 102 (position.label in template: 102.G) Reactivity: nanG Position: 103 (position.label in template: 103.G) Reactivity: nanG Position: 104 (position.label in template: 104.A) Reactivity: 0A Position: 105 (position.label in template: 105.G) Reactivity: nanG Position: 106 (position.label in template: 106.C) Reactivity: 0.5C Position: 107 (position.label in template: 107.A) Reactivity: 1A Position: 108 (position.label in template: 108.A) Reactivity: 1A Position: 109 (position.label in template: 109.G) Reactivity: nanG Position: 110 (position.label in template: 110.C) Reactivity: 0C Position: 111 (position.label in template: 111.A) Reactivity: 0.5A Position: 112 (position.label in template: 112.A) Reactivity: 0.5A Position: 113 (position.label in template: 113.C) Reactivity: 0C Position: 114 (position.label in template: 114.A) Reactivity: 0A Position: 115 (position.label in template: 115.C) Reactivity: 0C Position: 116 (position.label in template: 116.G) Reactivity: nanG Position: 117 (position.label in template: 117.U) Reactivity: nanU Position: 118 (position.label in template: 118.C) Reactivity: 1C Position: 119 (position.label in template: 119.G) Reactivity: nanG Position: 120 (position.label in template: 120.U) Reactivity: nanU Position: 121 (position.label in template: 121.C) Reactivity: 0C Position: 122 (position.label in template: 122.C) Reactivity: 0C Position: 123 (position.label in template: 123.A) Reactivity: 0A Position: 124 (position.label in template: 124.C) Reactivity: 0C Position: 125 (position.label in template: 125.C) Reactivity: 0C Position: 126 (position.label in template: 126.A) Reactivity: 1A Position: 127 (position.label in template: 127.G) Reactivity: nanG Position: 128 (position.label in template: 128.U) Reactivity: nanU Position: 129 (position.label in template: 129.C) Reactivity: 0C Position: 130 (position.label in template: 130.A) Reactivity: 1A Position: 131 (position.label in template: 131.G) Reactivity: nanG Position: 132 (position.label in template: 132.G) Reactivity: nanG Position: 133 (position.label in template: 133.G) Reactivity: nanG Position: 134 (position.label in template: 134.C) Reactivity: 0C Position: 135 (position.label in template: 135.G) Reactivity: nanG Position: 136 (position.label in template: 136.A) Reactivity: 0A Position: 137 (position.label in template: 137.U) Reactivity: nanU Position: 138 (position.label in template: 138.A) Reactivity: 0A Position: 139 (position.label in template: 139.U) Reactivity: nanU Position: 140 (position.label in template: 140.U) Reactivity: nanU Position: 141 (position.label in template: 141.A) Reactivity: 0.5A Position: 142 (position.label in template: 142.U) Reactivity: nanU Position: 143 (position.label in template: 143.G) Reactivity: nanG Position: 144 (position.label in template: 144.G) Reactivity: nanG Position: 145 (position.label in template: 145.A) Reactivity: 0.5A Position: 146 (position.label in template: 146.C) Reactivity: 0C Position: 147 (position.label in template: 147.C) Reactivity: nanC Position: 148 (position.label in template: 148.A) Reactivity: nanA Position: 149 (position.label in template: 149.A) Reactivity: nanA Position: 150 (position.label in template: 150.C) Reactivity: nanC Position: 151 (position.label in template: 151.G) Reactivity: nanG Position: 152 (position.label in template: 152.C) Reactivity: nanC Position: 153 (position.label in template: 153.C) Reactivity: nanC Position: 154 (position.label in template: 154.G) Reactivity: nanG Position: 155 (position.label in template: 155.C) Reactivity: nanC Position: 156 (position.label in template: 156.G) Reactivity: nanG Position: 157 (position.label in template: 157.C) Reactivity: nanC Position: 158 (position.label in template: 158.C) Reactivity: nanC Position: 159 (position.label in template: 159.A) Reactivity: nanA Position: 160 (position.label in template: 160.A) Reactivity: nanA Position: 161 (position.label in template: 161.C) Reactivity: nanC Position: 162 (position.label in template: 162.G) Reactivity: nanG Position: 163 (position.label in template: 163.C) Reactivity: nanC Position: 164 (position.label in template: 164.G) Reactivity: nanG Position: 165 (position.label in template: 165.C) Reactivity: nanC Position: 166 (position.label in template: 166.A) Reactivity: nanA Position: 167 (position.label in template: 167.G) Reactivity: nanG Position: 168 (position.label in template: 168.C) Reactivity: nanC Position: 169 (position.label in template: 169.G) Reactivity: nanG Position: 170 (position.label in template: 170.U) Reactivity: nanU Position: 171 (position.label in template: 171.A) Reactivity: nanA Position: 172 (position.label in template: 172.A) Reactivity: nanA Position: 173 (position.label in template: 173.C) Reactivity: nanC Position: 174 (position.label in template: 174.G) Reactivity: nanG Position: 175 (position.label in template: 175.A) Reactivity: nanA Position: 176 (position.label in template: 176.C) Reactivity: nanC Position: 177 (position.label in template: 177.U) Reactivity: nanU Position: 178 (position.label in template: 178.A) Reactivity: nanA Position: 179 (position.label in template: 179.C) Reactivity: nanC Position: 180 (position.label in template: 180.C) Reactivity: nanC Position: 181 (position.label in template: 181.3')3' 10 20 30 50 100 150


nnr-tsaE-amiB-mutL-miaA-hfq-hflX-hflK-hflC



Position: 9443-9582, Conformation: #0







Retained alignments:


   NC_009792.1       CAGAU...GCUG.....A..AAG..G...C.GC.U...AA...CG.C.G...CC.U......................GCGGC.AA...A...AGA......C-...A...G...C...A...CGG.G...--UAAC....AAU...C...U.....................................GCUGCGUCU.GCCG.CCGGC..UUC...AU.C.G.U.CC.AG...CAC..GA.............................GCGGA..GCA..AGCAAU...A......C...C.UCGUCC....A...C...CA.GUCA..........................GGG.C..GA..U.AUU.....AUGGACCAACGCCGCGCUAAC.................GCGCAGCGUAACGACUACC
   NC_010694.1       CAGCU...GAUG.....C..GCG..G...G.CA.G...GC...UG.G.U...--.-gcaucc......accggaa...-----.--...A...UGC......CC...A...G...G...A...CGG.C...AGCAGC....AGU...C...U.....................................GCUGCGCCU.GCCU.CCUGC..GUC...UG.G.C.-.-A.GC...AAC..GA.............................GC-GU..GCG..AACAGC...C......G...U.UCAUCG....U...U...CA.GUCC..........................GGG.U..GA..C.AUU.....AUGGAUCAGCGCCGGGUGAAU.................GCUCAGCGUUCCGAUACCC
   NC_013592.1       -----...----.....-..---..-...-.-C.U...CG...AU.C.A...AU.U......................GAUGC.GA...G...GUC......AG...G...G...G...A...GUU.U...CCCGGC....AA-...-...-ccgcaccugccaacggcaaugcagcgaaucccgcgccGUUGCGCCU.G---.CCGUC..GAC...AU.C.C.G.GC.GG...U--..-A.............................ACGGU..GCC..AGCUAU...G......C...G.CCCCGU....U...CuucCA.ACAA..........................CGG.U..AA..U.AUU.....AUGGAUCAACGCCGCGCCAAC.................GCGCAGCGUGACGAGAUCA
   NC_013961.1       CAGCU...GAUG.....C..GUG..G...U.CA.G...GC...--.-.-...--.-uggcgcaucaaccggcaau...---GC.AC...A...GG-......--...-...-...-...A...UGG.A...AGCAGC....CGU...C...U.....................................GCUGCGUCU.GCCU.CCUGC..UUC...UG.A.C.A.--.GC...AAC..GA.............................ACG-C..GCC..AACAGC...A......G...U.UCGUCG....U...U...CA.GUCC..........................GGA.C..GA..C.AUU.....AUGGAUCAGCGCCGGGUGAAU.................GCUCAGCGUUCCGAUACCC
   NC_014306.1       CAGAU...UAUG.....C..GCG..G...A.CA.G...GG...CG.G.A...G-.-caucgucgaacgcaaccca...-----.--...-...---......GG...A...C...A...G...CAG.C...AGCAAC....AGC...C...U.....................................GUUGCGCCU.GCCA.CCGGC..---...--.C.A.G.CG.GC...AGC..A-a.........................ug.ACCGC..GCC..AGUAAC...G......G...U.UCGACG....U...A...UA.AUCC..........................GGA.C..AC..C.AUC.....AUGGAUCAGCGCCGGGCGAAU.................GCUCAGCGCAACGAUACCC
   NC_015968.1       CAGAU...GCUG.....A..AAG..G...C.GG.U...UC...UG.C.G...CC.U......................GCGGC.GA...A...GUCgucagaCA...A...C...A...G...CGG.U...GCUAAC....AAC...C...U.....................................GCUGCGUCU.GCCG.CCAGC..GUC...AU.C.A.G.GU.AG...CUC..CA.............................GUG--..-CG..ACUACA...A......C...G.CCUUCU....U...C...GA.ACGA..........................UGG.U..GA..C.AUC.....AUGGACCAACGCCGUGCUAAC.................GCGCAGCGUAACGACUACC
   NC_017910.1       CAGUU...GCUG.....A..AAA..A...C.GG.C...AG...UC.A.G...CC.U......................GCGGC.GA...A...GAG......CG...A...C...A...G...UGC.U...GCUGCU....GAU...A...U.....................................GCUGCGCCU.GCCA.CCGGC..GGC...GU.C.C.-.--.--...AGC..CA.............................GA---..-GU..AGCGC-...-......-...-.--GUCA....A...C...--.----guccucuuccuc..aucagugaguagUGG.C..GA..C.AUU.....AUGGAUCAGCGCCGGGCGAAC.................GCUCUGCGUCGGGGA----
   NC_021870.1       CAGAU...GCUG.....A..AAG..G...C.GG.G...AA...UG.C.G...CC.G......................GCGGC.AA...A...GAG......CG...A...C...A...A...UAG.C...GCCAGC....AAC...C...U.....................................GCUGCGCCU.GCCG.CCGUC..CAC...CA.C.G.U.CU.AA...CAC..CA.............................GUGGA..GCA..AGCAAC...A......C...G.UCGUCC....U...C...AA.GCCA..........................GGG.C..GA..U.AUU.....AUGGACCAACGUCGCGCUAAU.................GCGCAGCGUAACGACUACC
   NZ_AP019007.1     CAGAU...GCUG.....A..AAG..G...C.GG.U...UC...UG.C.G...CC.U......................GCUGC.GAaguC...GGG......AA...A...C...A...G...UGG.G...GCGAAU....AAC...C...U.....................................GCUGCGCCU.GCCG.CCAGC..CUC...AU.C.G.G.--.-G...CAG..CG.............................CCAGC..GCG..AACACA...A......C...G.CCUUCU....U...C...GA.ACGA..........................UGG.U..GA..C.AUU.....AUGGACCAACGCCGUGCUAAC.................GCGCAGCGUAACGACUACC
   NZ_AP019630.1     CAGAU...GCUG.....A..AAG..G...C.GG.U...UC...UG.C.G...CC.A......................GCAGC.GA...A...AGG......CG...A...CaccA...G...CGG.A...GCGAAU....AAC...C...U.....................................GCUGCGUCU.GCCG.CCAGC..C--...-U.C.A.A.CA.GG...CAG..CG.............................CCAGC..ACG..AACACA...A......C...G.CCUUCU....U...C...GA.ACGA..........................UGG.U..GA..C.AUU.....AUGGACCAACGCCGUGCUAAC.................GCGCAGCGUAACGACUACC
   NZ_AP022508.1     CAGAU...GCUG.....A..AAG..G...C.GG.U...UC...UG.C.A...CC.G......................GCAGC.GA...A...AGA......CA...C...C...A...G...CGG.A...GCGAAC....AAC...C...U.....................................GCUGCGUCU.GCCG.CCAGC..C--...-U.C.A.U.CA.GG...CAG..CU.............................CCAGC..GCG..AACACA...A......C...G.CCUUCU....U...C...GA.ACGA..........................UGG.U..GA..C.AUU.....AUGGACCAACGCCGUGCUAAC.................GCGCAGCGUAACGACUACC
   NZ_AP022547.1     CAGAU...GCUG.....A..AAG..G...C.GC.C...GG...CG.C.G...CC.G......................GCGGC.AA...A...GAG......CG...A...U...AgcaG...UGG.C...GCAAGC....GAU...C...U.....................................GCUGCGUCU.GCCG.CCUGC..AGC...--.-.C.A.GC.UC...AAA..CA.............................GC---..GCC..AGUAAC...G......C...U.UCUACC....U...C...UAcGGGA..........................GGC.-..AC..C.AUU.....AUGGACCAACGCCGCGCCAAC.................GCGCAGCGUAACGACUACC
   NZ_AP023184.1     CAGAU...GCUC.....A..AAG..G...U.GGcU...CA...CA.G.C...-C.A......................GCGGC.AA...A...GAC......UG...A...U...A...AcacAGG.G...GCGAAC....AAC...U...U.....................................GUUGCGUCU.GCCA.CCUGC..GUC...--.-.A.A.GU.UC...AAG..CA.............................GCGGU..AGC..GCCAGC...A......C...A.CAGUCC....UcguC...AA.GCCG..........................GGG.C..GA..U.AUC.....AUGGAUCAGCGCCGCGUGAAC.................GCGCAGCGCACUGAUAACC
   NZ_CP011254.1     CAGAU...GCUG.....C..GCG..G...-.--.U...GC...CG.G.U...AA.G......................UCGGC.U-...-...-AG......CG...A...A...G...G...C--.-...------....---...-...-agcaaagaugccgga......cagaaccuucucgccc--------C.UGCG.CCAGC..CUC...G-.A.C.U.UC.UU...CAU..CG.............................--GAG..GCG..AGCACC...A......G...C.AGUUCC....A...G...CA.G---..........................CGG.U..UC..C.AUC.....AUGGACCAACGCCGGGCUAAU.................GCGCAGCGUAGCGAC-AAC
   NZ_CP011602.1     CAGAU...GCUG.....A..AAG..G...C.GG.G...AA...UG.C.A...CC.U......................GCGGC.AA...A...GAG......CG...A...U...AgcaG...UGG.C...GCGAAC....AAC...C...U.....................................UCUGCGCCU.GCCG.CCUGC..AUC...CU.C.U.U.CC.GG...UAA..CA.............................GCGGU..GCG..AGCAAU...U......C...A.UCGUCC....A...U...CA.GUCA..........................GGG.C..GA..C.AUC.....AUGGACCAACGCCGCGCUAAC.................GCGCAGCGUAACGACUAUC
   NZ_CP012257.1     CAGAU...GCUG.....A..AAG..G...C.GG.C...UC...CG.C.G...CC.U......................GCCGC.--...-...GAG......CG...A...C...G...A...CAA.C...AACAGC....G--...-...-gcaac...........................ccgcuGCUGCGUCU.GCCG.CCGGU..CUC...AG.G.C.A.GC.GG...CAA..CA.............................GCGGC..GCG..AGCAAC...A......G...C.GCGUCU....U...C...UG.GCCG..........................UGG.C..GA..U.AUU.....AUGGAUCAACGCCGUGCCAAC.................GCGCAGCGUAACGAUUACC
   NZ_CP012264.1     CAAAU...GCUG.....A..AAG..G...C.GG.C...UC...UG.C.A...CC.U......................GCCUC.GA...G...CGGu...gaCA...A...C...A...A...UAG.C...GGCAAC....CCG...C...U.....................................GCUGCGCCU.GCCG.CCAGC..UUC...CGgC.A.G.CG.GC...AA-..UA.............................GCGGC..GCG..AGCAAC...G......G...C.GGGUCC....U...C...UG.GCCG..........................UAG.C..GA..U.AUU.....AUGGAUCAGCGCCGUGCCAAC.................GCGCAGCGUAACGAUUACC
   NZ_CP012266.1     CAGAU...GCUG.....A..AAG..G...C.GG.U...UC...CG.C.G...CC.U......................GCGGC.CA...G...CGA......CG...A...C...A...G...CAA.C...AGCGGC....AAU...CcgcU.....................................GCUGCGUCU.GCCG.CCGGU..UUC...CG.G.C.A.GC.GG...CAA..CA.............................GCGGC..GCG..AGCAAC...A......G...C.GCGUCU....U...C...UG.GCCG..........................UGG.C..GA..U.AUU.....AUGGAUCAACGCCGUGCCAAC.................GCGCAGCGUAACGAUUACC
   NZ_CP012268.1     CAGAU...GCUG.....A..AAG..G...C.GG.U...UC...CG.C.G...CC.U......................GCCGC.CA...G...CGA......CG...A...C...A...G...CAA.C...AGCGGC....AAU...CcacU.....................................GCUGCGUCU.GCCG.CCGGU..UUC...CG.G.C.A.GC.GG...CAA..CA.............................GCGGC..GCG..AGCAAC...A......G...C.GUGUCC....U...C...UG.GCCG..........................UGG.C..GA..U.AUU.....AUGGAUCAACGCCGUGCCAAC.................GCGCAGCGUAACGAUUACC
   NZ_CP012871.1     CAGAU...GCUC.....A..AGG..G...C.GG.C...AG...CG.C.G...CC.U......................GCGGC.GA...A...GAG......--...-...-...-...-...CAG.C...ACCAGC....---...-...-ggggcga.......................auaaccuGCUGCGCCU.GCCG.CC---..UUC...GU.C.-.-.--.--...---..--aacgagcagc........agcgccagcg.-----..-CC..ACGACC...A......C...G.UCUUCU....U...C...AA.GCGA..........................UGG.U..GA..C.AUC.....AUGGACCAACGCCGCGCGAAC.................GCGCAGCGUAACGACUACC
   NZ_CP013232.1     CACAU...GGUG.....U..CGA..G...C.GU.G...AU...CG.C.C...UUgU......................GCGGC.G-...-...--G......UG...A...A...A...A...CGU.G...UUCGGC....AAA...C...U.....................................GCCGCAGCU.GGCG.CCUAC..CG-...--.U.C.A.GC.ACc.gAAG..CC.............................GUGCU..GCA..AGC---...-......-...-.------....-...-...--.----cgauccggaagugaucuucgccgccg---.-..--..-.---.....---------------------acgguggcaguucgccc---------AGCGCAAGCU
   NZ_CP013940.1     CAGAU...GCUG.....A..AAG..G...C.GG.C...UC...CG.C.G...CC.U......................GCCGC.GA...G...CGAc...gaCA...A...U...A...A...CAG.C...GGCAAC....CCG...C...U.....................................GCUGCGUCU.GCCG.CCGGC..CUC...CG.G.CaG.CG.GC...-AA..CA.............................GCGGC..GCG..AGCAAC...A......G...C.GCGUCC....U...C...UG.GCCG..........................UGG.C..GA..U.AUU.....AUGGAUCAACGCCGUGCCAAC.................GCGCAGCGUAACGAUUACC
   NZ_CP013990.1     CAGAU...GCUG.....A..AAG..G...C.GC.A...AA...CG.C.C...AC.U......................GGCGC.GA...A...GAA......CG...A...C...-...-...---.-...ACCAGC....---...-...-ggagcga.......................auaaccuGCUGCGUCU.GCCA.CC---..UGC...GU.C.A.A.CA.GG...CAA..CU.............................CCAGC..GCA..AAUACC...A......C...C.UCUUCU....U...C...AA.ACGA..........................UGG.U..GA..C.AUC.....AUGGACCAACGCCGCGCCAAC.................GCGCAGCGUAACGACUACC
   NZ_CP014007.2     CAGAU...GCUG.....A..AAG..G...C.GG.CgcgAG...CG.C.A...CC.U......................GCGGC.AA...A...GAG......UG...A...U...AgcaG...UGG.C...GCAAAC....AAC...C...U.....................................GCUGCGCCU.GCCG.CCUGC..GUC...CA.A.C.U.CU.GG...---..CA.............................GCAGU..GCG..AAUAGC...G......C...C.-CCGGC....A...C...CA.-UCU..........................GCC.GgaGA..C.AUC.....AUGGACCAACGCCGCGUAAAC.................GCGCAGCGUAACGACUACC
   NZ_CP014070.2     CAGAU...GCUG.....A..AAG..G...C.GC.G...AG...CG.C.G...CC.G......................GCGGC.AA...A...GAG......CG...A...U...A...G...CGG.U...UCGAAC....---...C...U.....................................GCUGCGUCU.GCCC.UCCAC..GUC...UU.C.U.U.CC.AG...CAG..CA.............................GCGGA..GCA..AGCAAC...A......C...C.UCGUCC....A...C...CA.GUCA..........................GGG.C..GA..U.AUU.....AUGGACCAACGCCGCGCUAAC.................GCGCAGCGUAACGACUACC
   NZ_CP014137.1     CAGAU...GCUG.....C..GCG..G...-.-G.C...AA...GG.C.G...--.-cugag.........agcgc...GCC--.--...A...GGC......A-...G...C...A...G...CGG.C...GCCAAU....A--...-...C.....................................GCUGCGUUU.GCCG.ACAAC..GCC...AA.G.C.A.GC.G-...---..--.............................GCGCG..GCG..AGCACC...A......G...U.CAGACG....-...-...--.----cgaagcac.........uaguaauaaCGG.C..AA..U.AUC.....AUGGAUCAGCGCAGAGCGAAU.................GCGCAGCGUGAUGACA-UC
   NZ_CP015613.1     CAAAU...GCUG.....C..GUG..G...C.CC.-...--...UG.C.C...GG.C......................GCGGC.GG...GugaCGG......CA...G...U...A...A...AGA.C...ACC---....AGC...C...U.....................................---G-AUUC.GUCU.CAACC..CCG...CU.C.C.G.UCuGC...CAA..CA.............................GUGGC..GCC..AGCUCG...A......-...A.CAGCC-....-...-...--.----agcguag............caacagc-GG.C..UC..G.GUC.....AUGGACCAACGCCGGGCGAAU.................GCGCAGCGUGACGA-CACC
   NZ_CP016337.1     CAGAU...GCUG.....A..AAG..G...C.GG.U...AAcacCG.C.U...CC.U......................GCGGC.AA...A...GAG......UGacaA...C...A...G...UGG.C...GCGAAU....AAC...U...U.....................................GCUGCGUCU.GCCA.CCAGC..GUC...A-.-.A.G.CU.CC...-AG..CA.............................GCAGC..GCC..AACAGC...G......C...C.CCCGCA....A...C...CU.CUGC..........................GGG.A..GA..U.AUC.....AUGGACCAACGCCGCGUUAAC.................GCGCAGCGUAACGAUUACC
   NZ_CP016948.1     CAGAU...GCUG.....C..GCG..G...C.CA.A...GG...CG.C.G...GC.A......................CCGGA.GA...G...CGG......CA...A...C...A...A...GGA.U...ACCAGC....---...C...-ug................................auu--CGCCUCA.AUCC.GAAUC..CUG...CG.C.C.GgCU.GC...CAA..CA.............................GCAGC..GCU..------...-......-...-.CCGCGC....A...C...CA.GCGG..........................CGG.U..UC..G.AUU.....AUGGAUCAGCGCCGGGCGAAU.................GCGCAGCGUGACGAC-ACC
   NZ_CP017184.1     CAGAU...GCUG.....A..AAG..G...C.AG.U...UC...UG.C.A...UC.G......................GCAGC.AA...A...AGA......CA...A...C...A...G...CGG.U...GCGAAC....AAC...C...U.....................................GCUGCGUCU.GCCA.CCUGC..GUC...AU.C.C.G.--.-G...UAG..CA.............................CAAGC..GCA..ACAACC...A......C...G.UCUUCU....U...C...GA.GCGA..........................UGG.U..GA..C.AUU.....AUGGACCAACGCCGUGCUAAC.................GCGCAGCGUAACGACUACC
   NZ_CP017279.1     CAGAU...GCUG.....A..AAG..G...C.GG.U...UC...GG.C.G...CC.G......................GCGGC.AA...A...GGC......GG...A...U...AccaG...CGG.U...GCCAAC....AAC...C...U.....................................GCUGCGUCU.GCCA.CCUGC..GGC...AU.C.C.G.GU.--...-AG..CU.............................CAAGC..GCC..ACAACC...A......C...G.CCUUCU....U...C...GA.ACGA..........................UGG.U..GA..C.AUU.....AUGGACCAACGCCGUGCUAAC.................GCGCAGCGUAACGACUACC
   NZ_CP017454.1     -----...----.....-..---..-...-.--.U...UU...CGaC.C...AG.C......................GCGUC.GA...C...GAG......CG...G...U...A...A...UGC.U...GCCAAU....---...-...-ccgg.............................cgccGUUGCGUCU.GCCG.UCAAG..CUC...AU.C.A.A.AC.AG...UAG..UG.............................GUG--..-UC..GGUUAU...G......C...G.CC---G....-...-...--.----cguucuuc.........cggcaacaaCGG.C..AA..C.AUU.....AUGGAUCAACGCCGCGCCAAC.................GCGCAGCGCGACGA-----
   NZ_CP019044.1     GCGAU...GCGC.....U..GAUcgC...G.GU.C...AA...AG.C.G...CU.U......................GUUGA.GC...A...GCGa....aGU...G...A...A...A...CGG.U...ACAGGU....CUA...C...C.....................................GCCUCGCUU.UCCG.CCUGCcgCGC...UG.C.U.U.CC.AG...AAG..CU.............................CCGAA..AA-..-----U...G......C...C.UCU---....-...-...--.-UC-a.......................cu---.-..GA..G.AUU.....G-----UAGCGCUCCGUCAGC.................ACGGCGCGCAUGCGGUCGA
   NZ_CP019706.1     CUGAU...GCGG.....GgcACG..G...G.UU.C...AA...--.C.C...AA.U......................G--CC.GC...U...GGC......AG...C...C...A...G...GAG.-...AGUAGC....AGU...C...U.....................................GAUGCGUCU.GCC-.-----..GCC...GG.C.G.A.CC.GG...CAG..C-aac......................gau.--CGC..GCC..AACAGC...G......G...U.UCGUCC....U...U...CU.CACA..........................GGA.U..GA..C.AUU.....AUGCAAAGCCGCCGUGCUAAU.................GCACAGCGCAAUGACACCC
   NZ_CP019937.1     CGCAUcgcGGUG.....U..GUG..A...C.GA.C...AU...GU.A.C...AC.C......................UACGC.GC...A...GGG......CG...A...A...A...G...CGC.G...GCC---....---...-...-....................................a---GCGUUG.UGCG.GCAGA..CCC...UG.C.C.G.CC.--...---..--cgccaaugucc......cgacagauauc.--GGC..GUG..U-UGCU...A......A...G.CAGCCU....-...-...--.----gaa....................cccCGG.C..AA..U.AGC.....CUGAUCACGC-CCGCCGCAGA.................UGGCAGCGCGACCAUCGUC
   NZ_CP020388.1     CAGAU...GCUC.....A..AGG..G...G.AA.U...GC...CU.C.C...GC.C......................GUAAA.GC...A...GAG......CA...G...C...A...G...CGA.A...AGCAGU....GAC...C...U.....................................GCUGCGCCU.---G.CCGUC..UUC...GU.C.C.G.AC.GC...AAG..CA.............................GCGAC..GCG..CGCAGC...C......G...C.CAGUCG....U...C...AA.GCGA..........................CAG.C..AG..U.AUU.....AUGGACCAGCGCCGCGCUAAC.................GCGCAGCGCAACGACUACC
   NZ_CP023009.1     CAGAU...GCUG.....C..GUG..G...U.CA.G...AA...CA.C.C...AC.G......................-----.--...-...-GG......CG...G...C...A...A...CGC.G...ACCAAC....A--...C...G.....................................GUUGCGCCGcUGCG.UAACU..---...--.C.C.U.CG.A-...---..--ccucgucu...........aauaacggu.-UCGA..GCAgcACCUAC...A......A...U.UCUUCG....C...G...CA.----gcagc................aucaaCGG.U..AA..C.AUC.....AUGGAUCAGCGCCGGGCCAAC.................GCCCAGCGGGAUG-AGAUC
   NZ_CP023525.1     CAGAU...GUUG.....A..AGG..G...-.--.-...-U...GG.C.G...--.-cucag........cagccg...GCCGC.AA...A...GAG......CG...A...U...A...A...CAG.C...GC-AGCgaacAAU...C...U.....................................GCUGCGUCU.GCCG.CCAGC..GUC...--.-.C.A.GC.UC...AAG..CA.............................GCAGU..GCC..AGCACC...U......C...U.UCGUCC....U...C...CU.CGAG..........................UGG.C..GA..U.AUC.....AUGGAUCAGCGUCGUGCUAAC.................GCACUGCGCAACGAUACCC
   NZ_CP023567.1     CAGCU...GAUG.....C..GCG..G...C.CA.G...GC...CG.G.-...--.-cgcau........caaccg...GCAAU.UC...U...CAG......--...-...-...G...A...CGG.A...AGCAGC....AGU...C...U.....................................GCUGCGUCU.GCCU.CCUGC..CUC...AG.G.C.-.--.--...---..--agcaag................gaacgc.-----..GCC..AACAGC...A......G...U.UCGUCG....U...C...CA.GUCC..........................GGA.C..GA..C.AUU.....AUGGAUCAGCGCCGGGUGAAU.................GCUCUGCGUUCCGAUACCC
   NZ_CP025003.1     -----...----.....-..---..-...-.--.U...UU...CGaC.C...AG.U......................GCGCC.GA...C...GAG......CG...G...C...A...A...CGC.C...GCCAAU....---...-...-ccgg.............................cgccGUUGCGUCU.GCCG.UCAAC..CUC...AU.C.A.A.AC.AG...UAG..UG.............................GUG--..-UC..GGCUAU...G......C...G.CCGC--....-...-...--.----guucuuccg........gcaacaacg--G.C..AA..C.AUU.....AUGGAUCAACGCCGCGCCAAC.................GCGCAGCGCGACGA-----
   NZ_CP025799.1     -----...----.....-..---..-...-.-C.U...CG...AU.C.A...AU.U......................GAUGC.GA...G...GUC......AG...G...G...A...A...ACU.U...CCCGGC....AA-...-...-gcgcaccugccagcgguaaugcagcgaaucccgcgccGUUGCGCCU.G---.CCGUC..GAC...AU.C.U.G.GC.AG...UAG..CG.............................GUGCC..AGC..UAUGCG...C......C...G.CGUUCU....U...C...CA.ACAA..........................CGG.U..AA..C.AUU.....AUGGAUCAACGCCGCGCCAAC.................GCGCAGCGUGACGAGAUCA
   NZ_CP027107.1     CAGAU...GCUG.....A..AAG..G...C.GG.C...UC...CG.C.G...CC.U......................GCCGC.GA...G...CGA......CG...A...U...A...A...UAA.C...AGCGGC....AAU...CcgcU.....................................GCUGCGUCU.GCCG.CCGGC..---...CU.C.C.G.GC.AGcggCAA..CA.............................GUGGC..GCG..AGCAAC...A......G...C.GCGUCC....U...C...UG.GCCG..........................UGG.C..GA..U.AUU.....AUGGAUCAACGCCGUGCCAAC.................GCGCAGCGUAACGAUUACC
   NZ_CP027986.1     CAGAU...GCUU.....A..AGG..G...C.GG.U...UC...AG.C.G...CC.G......................GCAGC.GA...A...GGC......UG...A...CaccA...G...CGG.U...GCCAAC....AAC...C...U.....................................GCUGCGUCU.GCCA.CCGGC..GUC...AU.C.C.G.--.-G...UAG..CA.............................CAAGC..GCA..ACAACC...A......C...G.UCUUCU....U...C...GA.ACGA..........................UGG.U..GA..C.AUU.....AUGGACCAACGCCGUGCUAAC.................GCGCAGCGUAACGACUACC
   NZ_CP028271.1     CAGCU...GAUG.....C..GCG..GucaG.AG.U...UC...CU.C.C...AG.U......................GCGCC.GC...G...CAG......CG...C...U...C...A...GGA.U...AGCAGC....AGC...C...U.....................................GCUGCGCCU.GCCG.CCAGC..CUC...AG.G.-.-.CA.GC...AAC..GA.............................GC-GC..GCC..AGCAAU...AgcaguuC...G.UCGU--....-...U...CA.GUCC..........................GCA.G..GA..C.AUU.....AUGGAUCAGCGUCGUGCCAAC.................GCACAGCGCAACGACACCC
   NZ_CP031560.1     -----...----.....-..---..-...-.--.U...UU...CG.C.C...CAgU......................GCGCC.GA...C...GAG......CG...G...C...A...A...UGC.C...GCCAAU....---...-...-ccag.............................cgccGUUGCGUCU.GCCG.UCAAC..CUC...AU.C.A.A.AC.AG...UAG..UG.............................GUG--..-UC..GGCUAU...G......C...G.CCGC--....-...-...--.----guucuuccg........gcaacaacg--G.C..AA..C.AUU.....AUGGAUCAACGCCGCGCCAAC.................GCGCAGCGCGACGA-----
   NZ_CP033744.1     CAAAU...GCUG.....A..AAG..G...U.GG.U...AG...UG.C.G...CC.A......................GCAGC.AA...A...GAC......UG...A...C...A...G...CAG.U...UCAAAC....---...C...U.....................................GUUGCGUCU.GCCG.CCAGC..AAC...GA.C.U.U.CC.AG...---..CA.............................CUGGA..GCA..AGCAAU...A......C...A.UCGUCC....A...C...CA.GUCA..........................GGG.C..GA..U.AUU.....AUGGACCAACGCCGCGCGAAU.................GCGCAGCGUAACGACUACC
   NZ_CP033844.1     CAGAU...GCUG.....A..AAG..G...C.GC.U...GG...CG.C.G...CC.A......................GCGGC.AA...A...GAG......UG...A...U...AgcaG...UGG.C...GCAAGC....GAU...C...U.....................................GCUGCGUCU.GCCG.CCUGC..AUC...--.-.C.A.GC.UC...AAG..CA.............................GC---..GCC..AGUAAC...G......C...U.UCUACC....U...C...UAcGGGA..........................GGC.-..AC..C.AUU.....AUGGACCAACGCCGCGCCAAC.................GCGCAGCGUAACGACUACC
   NZ_CP036175.1     CAGAU...GCUG.....A..AAG..G...U.GC.U...GG...CG.C.A...CC.A......................GCGGC.AA...A...GAG......UG...A...U...AgcaG...UGG.C...GCAAGC....GAU...C...U.....................................GCUGCGUCU.GCCG.CCUGC..AUC...--.-.C.A.GC.UC...AAA..CA.............................GC---..GCC..AGUAAC...G......C...U.CAGACC....U...C...UA.CGGG..........................AGG.C..AA..C.AUU.....AUGGACCAACGCCGCGCCAAC.................GCGCAGCGUAACGACUACC
   NZ_CP037864.1     CAAAU...GCUG.....A..AAG..G...C.GG.U...AG...UG.C.G...CC.A......................GCAGC.AA...A...GAG......UG...A...C...A...G...CAG.U...UCAAAC....---...C...U.....................................GCUGCGUCU.GCCG.CCGGC..AAC...CA.C.U.U.CC.AG...---..CA.............................CUGGA..GCA..AGCAAC...A......C...U.UCGUCC....A...C...CA.GUCA..........................GGG.C..GA..U.AUU.....AUGGACCAACGCCGCGCGAAC.................GCGCAGCGUAACGACUACC
   NZ_CP038469.1     CAAAU...GCUA.....A..AAG..G...U.GG.C...AA...CG.C.C...CC.G......................GCAGC.AA...A...GAG......UG...A...A...A...G...CAG.U...UCA---....AAC...C...U.....................................GCUGACUCU.GCCG.CCAGC..AUC...GU.C.U.U.CC.AG...---..CA.............................CGGGA..GCA..AGCAAC...A......C...C.UCGUCC....A...C...CA.GUCA..........................GGG.C..GA..U.AUU.....AUGGACCAACGCCGCGUUAAC.................GCGCAGCGUAACGACUACC
   NZ_CP038662.1     CAGAU...GCUG.....C..GCG..G...C.CA.A...GG...CG.C.G...GC.G......................ACGGA.GA...G...CGG......CA...A...C...A...A...GGA.U...ACCAGC....---...C...-ug................................auu--CGCCUCA.AUCC.GAAUC..CUG...CG.C.C.G.GC.--...---..--...........................u.--GCC..AAC..AGCAGC...A......C...U.CCGCGC....A...C...CA.GCG-..........................GCGgA..UC..G.GUU.....AUGGAUCAGCGCCGGGCGAAU.................GCGCAGCGUGACGA-CACC
   NZ_CP038853.1     CAGCU...GAUG.....C..GUG..G...C.GG.U...CA...GG.-.-...-C.-gacaucgg...gucagaau...-----.--...-...---......--...-...-...-...-...-GG.U...------....---...-...-cagaaaggcgg..............uaacaguucuuc---------.GCUG.CCAGC..CAC...CU.C.C.G.AUcGC...AACgcCA.............................G--CC..GCA..A-UGAC...A......C...G.UCGUCA....U...A...CA.GUCC..........................GGA.C..AA..U.AUC.....AUGGAUCAGCGUCGGGCGAAU.................GCUCAGCGCAGCGACAGCC
   NZ_CP040392.1     CAGAU...GCUG.....A..AAG..G...C.GG.CgcgAG...CG.C.A...CC.U......................GCGGC.AA...A...GAG......UG...A...CagcA...G...UGG.C...GCAAAC....AAC...C...U.....................................GCUGCGCCU.GCCG.CCUGC..GUC...CA.A.C.U.CU.GG...---..UA.............................GCAGU..GCG..AAUAGC...G......C...C.-CCGGC....A...C...CA.-UCU..........................GCC.GgaGA..C.AUC.....AUGGACCAACGCCGCGUAAAC.................GCGCAGCGUAACGACUACC
   NZ_CP040428.1     CAGAU...GCUG.....A..AGG..G...C.--.-...GG...CG.C.U...A-.-......................-AAGC.AC...C...GGC......CA...A...A...A...Au.uCGGaU...AGCAGC....GAU...C...U.....................................GCUGCGUCU.GCCG.CCUGC..GCC...GG.A.-.-.-G.UC...CAG..CA.............................GUAGC..GCC..AGCCAG...U......C...A.UCGUCA....U...C...CA.GCAG..........................UGG.C..GA..C.AUC.....AUGGACCAGCGCCGUGCUAAC.................GCGCAGCGCAACGAUACUC
   NZ_CP041247.1     CAGAU...GCUG.....A..AAG..G...C.GC.C...GG...UG.C.C...CC.G......................GCGGC.AA...A...GAG......CG...G...U...A...G...CAG.UagcGCGAGC....GAU...C...U.....................................GCUGCGUCU.GCCG.CCUGC..AUC...--.-.C.A.GC.UC...AAG..CA.............................G---U..GCC..AGCACC...A......C...G.CCGACC....A...C...CA.CGGA..........................CGG.C..AG..U.AUU.....AUGGACCAACGCCGCGCUAAC.................GCGCAGCGUAACGACUACC
   NZ_CP041764.1     CAGAU...GCUG.....C..GCG..G...C.--.-...CA...GG.C.C...--.-......................GGCGC.AU...C...CAG......CG...A...C...A...G...CGG.C...------....---...-...-aacaaagauaccagccu...gauucgucucaacccug--------C.GCCG.UCGAC..UU-...--.-.C.C.GG.C-...AAC..AA.............................C-GCC..GGC..AGCAAA...C......C...G.CAGAAC....A...G...C-.---G..........................GUU.C..GG..-.-UU.....AUGGACCAACGCCGGGCGAAU.................GCGCAGCGUGACGA-UACC
   NZ_CP041925.1     CAGAU...GCUG.....A..AAG..G...C.GC.C...AC...UG.G.U...GC.G......................CCGGC.AA...A...GAG......CG...A...U...AgcaG...UGG.C...GCAAGC....GAU...C...U.....................................GCUGCGCCU.GCCG.CCUGC..GUC...--.-.C.A.GC.UC...AAG..CA.............................GC---..GCC..AGCACC...U......C...A.UCAACC....U...C...GA.GU--ucaa..................ccggGGG.U..AC..C.AUU.....AUGGACCAACGCCGCGCCAAC.................GCGCAGCGUAACGACUACC
   NZ_CP042220.2     -----...----.....U..UAG..G...U.GU.U...UC...AA.A.U...AA.U......................GCGCC.GA...U...GAG......CG...G...C...A...A...UGC.U...GUGAAU....---...-...-ccag.............................cgccGUUGCGUCU.GCCG.UCAAC..CUC...AU.C.G.G.GC.AG...UAA..UG.............................GUGUCggCUA..UGCACC...A......C...GcUCUUCC....G...G...UA.ACAA..........................CGG.C..AC..U.AUU.....AUGGAUCAGCGUCGCGCCAAC.................GCGCAGCGUGAUGA-----
   NZ_CP043318.1     CAGAU...GCUG.....A..AAG..G...C.AA.U...GC...UG.C.G...CC.A......................GCCGC.GA...A...AGG......CG...A...CaccA...G...CGG.C...GCGAAC....AAC...C...U.....................................GCUGCGUCU.GCCG.CCUGC..C--...-U.C.A.A.CG.GG...CAG..CG.............................CCAGC..ACG..AACACA...A......C...G.CCUUCU....U...C...GA.ACGA..........................UGG.U..GA..C.AUU.....AUGGACCAACGCCGUGCUAAC.................GCGCAGCGUAACGACUACC
   NZ_CP043342.1     CAAAU...GCUU.....A..AAG..G...C.AG.C...UC...AG.C.G...CC.G......................GCGAAaGC...U...GAU......-A...A...C...A...G...CGG.C...GCCAGC....AGC...C...U.....................................GCUGCGUCU.GCCG.CCAGC..GUC...AU.C.A.-.--.GG...CAG..CU.............................CCAGC..GCG..AACACA...A......C...G.CCUUCU....U...C...GA.ACGA..........................UGG.U..GA..C.AUU.....AUGGACCAACGCCGUGCUAAC.................GCGCAGCGUAACGACUACC
   NZ_CP044098.1     CAAAU...GCUG.....A..AAG..G...U.GG.U...AG...UG.C.A...CC.A......................GCAGC.AA...A...GAC......UG...A...C...A...G...CAG.U...UCAAAC....---...C...U.....................................GCUGCGUCU.GCCG.CCAGC..AAC...GA.C.U.U.CC.AG...---..CA.............................CUGGA..GCA..AGCAAC...A......C...A.UCGUCC....A...C...CA.GUCA..........................GGG.C..GA..U.AUU.....AUGGACCAACGCCGCGCGAAU.................GCGCAGCGUAACGACUACC
   NZ_CP044101.1     CAAAU...GCUG.....A..AAG..G...C.GG.U...AG...UG.C.G...CC.A......................GCAGC.AA...A...GAG......UG...A...C...A...G...CAG.U...UCAAAC....---...C...U.....................................GCUGCGUCU.GCCG.CCAGC..GAC...GA.C.C.U.CC.AG...---..CA.............................CUGGA..GCA..AGCAAC...A......C...C.UCGUCC....A...C...CA.GUCA..........................GGG.C..GA..U.AUU.....AUGGACCAACGCCGCGCGAAC.................GCGCAGCGUAACGACUACC
   NZ_CP045300.1     CAGAU...GCUG.....A..AAG..G...C.GG.CgcgAG...CG.C.A...CC.U......................GCGGC.AA...A...GAG......UG...A...CagcA...G...UGG.U...GCAAAC....AAU...C...C.....................................GCUGCGCCU.GCCA.CCUGC..GUC...CA.A.C.U.CU.GG...---..CA.............................GCAGC..GCG..AACAGC...G......C...C.-CCGGC....A...C...CA.-UCU..........................GCC.G..GAaaC.AUC.....AUGGACCAACGCCGCGUAAAC.................GCGCAGCGUAACGACUACC
   NZ_CP045771.1     CAAAU...GCUG.....A..AAG..G...C.GG.U...AG...UG.C.G...CC.A......................GCAGC.AA...A...GAG......UG...A...C...A...G...CAG.U...UCAAAC....---...C...U.....................................GCUGCGUCU.GCCG.CCAGC..AAC...GA.C.G.U.CC.GG...---..CA.............................CUGGA..GCA..AGCAAU...A......C...C.UCGUCC....A...C...CA.GUCA..........................GGG.C..GA..U.AUU.....AUGGACCAACGCCGCGCGAAC.................GCGCAGCGUAACGACUACC
   NZ_CP045783.1     CAGAU...GCUG.....A..AAG..G...C.GC.C...GC...CG.C.G...CC.G......................GCAGC.AA...A...GAG......CG...A...U...AgcaG...UGA.C...GCCAGC....GAU...C...U.....................................GCUGCGUCU.GCCA.CCUGC..AUC...--.-.C.A.GC.AC...AGG..CA.............................GC---..GCC..AGCACC...U......C...A.UCAACC....U...C...GA.G---cuca.................accggGGG.U..AG..C.AUU.....AUGGACCAACGCCGCGCUAAC.................GCGCAGCGUAACGACUACC
   NZ_CP045845.1     CAGAU...GCUG.....A..AAG..G...C.GG.U...AA...UG.C.C...CC.A......................GCGGC.AA...A...GAG......CG...A...U...AgcaG...UGG.U...GCCAAC....AAC...C...U.....................................GUUGCGCCU.GCCG.CCAGC..GUC...--.-.C.U.CU.UC...CAG..CA.............................GCAGC..GCA..AGUAAC...A......C...G.CCGUCU....G...C...CA.GUCA..........................GGG.C..AA..U.AUC.....AUGGACCAACGCCGCGCUAAC.................GCGCAGCGUAACGAUUACC
   NZ_CP048784.1     CAAAU...GCUG.....C..GUG..G...C.CA.A...AC...CG.G.C...GC.G......................GCGGC.GG...A...CGG......CA...A...U...A...A...AGA.C...ACCAG-....--C...-...-.....................................-CUG-AUUC.GUCU.CAACC..CCG...CU.C.C.GuCU.GC...CAA..CA.............................GCGGC..GCC..AGCU-C...A......A...G.CAGCCAgcgcA...C...CA.GCAG..........................CGG.C..UC..G.GUC.....AUGGACCAGCGCCGGGCAAAU.................GCGCAGCGUGACGA-CACC
   NZ_CP049608.1     CAGAU...GCUG.....A..AAG..G...C.GC.A...AA...UA.C.G...CC.A......................GCAUC.AA...A...GAG......CG...A...U...A...G...CAG.U...GGCGCG....AA-...-...-cucc.............................uuacUGCG--CCU.GCCG.CCUGC..GUC...CU.C.A.U.CC.AG...CAA..UA.............................-----..---..------...A......C...G.GCGCUA....A...C...CG.G---ccugcauc.........guccagcgcUGG.C..GA..C.AUC.....AUGGAUCAGCGCCGCGCCAAU.................GCGCAGCGUAACGAUUACC
   NZ_CP050150.1     CAGCU...GAUG.....C..GCG..G...U.GG.C...AA...AA.C.U...GA.C......................GCAGC.GG...C...G--......--...-...A...A...A...UCU.G...GCAGUC....A--...-...-ggauac.........................uagccuGAUUCGUU-.UAGA.CCCAA..--C...GC.C.U.G.CG.GC...AAC..CA............................aGUCGU..CC-..AGUAAU...G......C...A.GAUU--....-...C...AA.GUAG..........................UAG.C..AG..C.GUG.....AUGGACCAGCGCCGGGCGAAU.................GCUCAGCGUAACG-AUACC
   NZ_CP050508.1     CAGAU...GCUG.....A..AAG..G...C.GC.C...GG...UA.C.G...CC.G......................GCAGC.AA...A...GGG......CA...A...U...AgcaG...CGG.U...GCGAAC....GAU...C...U.....................................GCUGCGCCU.GCCG.CCUGC..UUC...--.-.C.A.GC.UC...AAG..CA.............................GC---..GCC..AGCACC...A......C...G.UCGACC....A...C...UA.CGGA..........................UGG.C..AA..C.AUU.....AUGGACCAACGUCGCGCUAAC.................GCGCAGCGUAACGACUACC
   NZ_CP050854.1     CAGAU...GCUG.....C..GCG..G...-.-G.C...AA...GG.C.G...C-.-cgaa..........agcac...GCCAA.--...-...--G......CA...A...C...A...G...UGG.U...UCCAAU....---...A...C.....................................GCUGCGUUU.GCCG.ACAAC..---...--.G.C.C.AA.GC...AGC..-G.............................GCUCG..GCC..AGCACC...A......G...U.---C--....-...-...--.----agacgcgaagca..guaguaauaacg--G.A..AA..U.AUC.....AUGGAUCAGCGCAGAGCAAAU.................GCGCAGCGUGAUGACA-UC
   NZ_CP051548.1     CAGAU...GCUG.....A..AAG..G...C.GG.G...AA...UG.C.A...CC.U......................GCGGC.AA...A...GAG......CG...A...U...AgcaG...UGG.C...GCGAAC....AAC...C...U.....................................UCUGCGCCU.GCCG.CCUGC..GUC...CU.C.U.U.CC.GG...UAA..CA.............................GCGGU..GCG..AGCAAU...U......C...A.UCGUCU....A...U...CA.GUCA..........................GGG.C..GA..C.AUU.....AUGGACCAACGCCGCGCUAAC.................GCGCAGCGUAACGACUAUC
   NZ_CP051652.1     CAGAU...GCUGcgugg-acAAG..G...C.GG.U...GA...A-.-.-...--.-a.................a...--UAC.GC...A...AAG......CA...A...U...A...A...CAG.U...AGCAGC....---...-...-.....................................GCUAACC-C.ACUG.C--GU..C--...UG.CcC.A.CU.GG...CAG..CA.............................GCGGU..GCA..GCGAAU...A......-...G.CAACCA....-...-...--.----gacgcgcag........caguaauaaUGG.A..AA..U.AUC.....AUGGAUCAGCGCAGAGCAAAU.................GCGCAGCGUGAUGACUUCA
   NZ_CP054043.1     CAAAU...GCUG.....C..GCG..G...U.CA.A...GG...CG.C.-...--.-aga............uaaa...G---C.GG...A...UGG......CA...A...C...A...A...AGA.C...ACCAGC....---...C...U.....................................GCUUCGUUU.GAAU.CCGCC..---...UU.C.-.-.-C.--...---..--ucugcuaauagc....agccaagagucu.--GGU..GCA..AGUAAC...U......C...A.AGCUCA....A...C...CA.G---..........................UGG.C..UC..U.AUC.....AUGGAUCAGCGUCGAGCGAAU.................GCUCAGCGUGAUA-CUUCC
   NZ_CP054058.1     CAGAU...GCUG.....A..AAG..G...U.GG.C...AG...UG.C.CgcaCC.U......................GCAAA.AA...A...GAA......UG...AcagC...A...G...UGG.C...GCCGAC....AGC...C...U.....................................AUUGCGCUU.GCCA.CCUGC..AUC...C-.-.-.-.--.--...---..--aguucgagcagucgcgccaacagcaaua.-----..-GC..AGCAGC...G......C...A.CCGGCA....U...C...AA.GCGA..........................UGA.C..AA..U.AUC.....AUGGACCAACGCCGUGCGAAU.................GCGCAGCGUAACGACUACC
   NZ_CP055055.1     CAGAU...GCUG.....A..AAG..G...U.GG.U...AA...CG.C.C...CC.U......................GCGGC.GA...A...GAG......CG...A...U...A...A...CGG.U...GCCAGC....AAU...C...U.....................................GCUGCGUCU.GCCG.CCAGC..CUC...UU.C.C.U.CC.AC...AAC..CA.............................GUGGA..GCA..AGCAAC...A......C...G.UCGUCC....A...C...CA.GUCA..........................GGG.C..GA..U.AUU.....AUGGACCAACGCCGCGCCAAU.................GCGCAGCGUAACGACUACC
   NZ_CP055292.1     CAGAU...GCUG.....A..AAG..G...U.GG.U...AA...CG.C.C...CC.U......................GCGGC.GA...A...GAG......CG...A...U...A...A...CGG.U...GCCAGC....AAU...C...U.....................................GCUGCGUUU.GCCG.CCAGC..CUC...UU.C.C.U.CC.AC...AAC..CA.............................GUGGA..GCA..AGCAAC...A......C...G.UCGUCC....A...C...CA.GUCA..........................GGG.C..GA..U.AUU.....AUGGACCAACGCCGCGCCAAC.................GCGCAGCGUAACGACUACC
   NZ_CP063425.1     CAGAU...GCUG.....A..AAG..G...U.GG.U...AA...UG.C.CgcgCC.U......................GCGGC.AA...A...GAG......UGacaA...C...A...G...UGG.C...GCGAAU....AAC...U...U.....................................GCUGCGUCU.GCCG.CCAGC..GUC...A-.-.A.G.CU.CC...-AG..UA.............................GCAGC..GCC..AACAGC...G......C...-.--CCCC....G...C...A-.----acgu..................cugcGGG.A..GA..U.AUC.....AUGGACCAACGCCGCGUUAAC.................GCGCAGCGUAACGACUACC
   NZ_CP065640.1     CAGAU...GCUG.....C..GUG..G...C.--.-...CA...GG.C.C...--.-......................GGCGC.AG...C...CAG......CG...A...C...A...G...CGG.C...------....---...-...-aacaa..........................agacac-------C-.----.--AGC..CUG...AU.U.C.G.UC.UU...---..--aacccugcgccgucgacuuccggcagca.ACGCC..GGC..AGUAAA...C......C...G.CAGAAC....A...G...C-.---G..........................GUU.C..GG..-.-UU.....AUGGACCAACGCCGGGCGAAU.................GCGCAGCGUGACG-AUACC
   NZ_CP065838.1     CAGAU...GCUG.....A..AAG..G...C.GC.C...GC...UG.C.G...CC.G......................GCAGC.AA...A...GAG......CG...A...U...A...G...CAG.UgacGCCAGC....GAU...C...U.....................................GCUGCGCCU.GCCG.CCAGC..AUC...--.-.C.A.GC.UC...AAG..CA.............................GC---..GCC..AGCACC...U......C...A.UCAACC....U...C...GA.G---cuca.................accggGGG.U..AG..C.AUU.....AUGGACCAACGCCGCGCUAAC.................GCGCAGCGUAACGACUACC
   NZ_CP070290.1     CAGAU...GCUG.....A..AAG..G...C.GG.U...AA...UG.C.G...CC.U......................GCGGU.GA...A...GAG......CG...A...C...A...A...CAA.C...GCCAGC....AAC...U...U.....................................GUUGCGCCU.GCCG.CCAGC..GCC...UU.C.C.U.CC.AC...GAA..CA.............................GUGGA..GUA..AGCAAC...A......C...A.UCGUCC....A...C...CA.GUCA..........................GGG.C..GA..U.AUU.....AUGGACCAACGCCGCGCUAAC.................GCGCAGCGUAAUGACUACC
   NZ_CP071070.1     CAGAU...GCUG.....A..AAG..G...C.GG.C...AA...CG.C.G...CC.G......................GCAAC.AA...A...ACG......CG...A...C...A...G...CGG.U...UCCGAC....---...C...U.....................................GCUGCGCUU.GCCG.ACU-A..CGU...CA.U.C.U.UCcAG...CAG..UA.............................GCGGA..GCA..AGCAAC...A......C...C.UCGUCC....A...C...CA.GUCA..........................GGG.C..GA..U.AUU.....AUGGACCAACGCCGCGCUAAC.................GCGCAGCGUAACGACUACC
   NZ_CP071320.1     CAGAU...GCUG.....C..GCG..G...C.CA.A...GG...CG.C.G...GC.G......................ACGGA.GA...G...CGG......CA...A...C...A...A...GGA.U...ACC---....---...-...-agccu...........................gauuc---GCCUCA.AUCC.GAAUC..CAG...CG.C.C.G.GC.--...---..--...........................u.--GCC..AAC..AGCAGC...A......C...C.CCGCGC....A...C...CA.G-CA..........................GCG.G..AU..CgGUU.....AUGGAUCAGCGCCGGGCGAAU.................GCGCAGCGUGACGA-CACC
   NZ_CP071383.1     CAGAU...GCUG.....A..AGG..G...C.GG.U...AA...CG.C.G...CC.U......................GCGGC.GA...A...AGAu...agCA...A...U...A...G...CGG.U...GCAAAC....AGC...A...U.....................................GCUACGUCU.GCCA.CCGUC..---...UU.C.A.U.CA.GG...UAA..UU.............................CCAGU..GCG..---AAU...A......C...A.ACCUCU....A...C...GA.ACGA..........................GGG.U..GA..C.AUC.....AUGGACCAACGCCGUGCUAAC.................GCGCAGCGUAACGACUACC
   NZ_CP071405.1     CAGCU...GAUG.....C..GUG..G...C.GG.U...CA...GG.CuU...CC.U...................cagGCCAGaAC...G...GUC......A-...-...G...A...A...GGG.C...GCGAAC....AGU..gC...U.....................................UCUCUGCCU.GCCA.UCUCC..GAC...CG.-.C.A.GC.GC...AAG..CC.............................GCAAU..G--..----AC...A......C...G.UCGUCA....U...A...CA.GUCC..........................GGA.C..AA..C.AUC.....AUGGAUCAGCGUCGGGCCAAU.................GCUCAGCGCAGCGACAGCC
   NZ_CP073236.1     CAGAU...GCUU.....A..AAG..G...C.GC.C...GG...CG.C.G...CC.G......................GCGGC.AA...A...GAG......CG...A...U...AgcaG...UGG.C...GCAAGC....GAU...C...U.....................................GCUGCGUCU.GCCG.CCUGC..AUC...--.-.C.A.GC.UC...AAA..CA.............................GC---..GCC..AGCAAC...G......C...U.UCUACC....U...C...UAcGGGA..........................GGC.-..AC..U.AUU.....AUGGACCAACGCCGCGCCAAC.................GCGCAGCGUAACGACUACC
   NZ_CP073262.1     CAACU...GAUG.....C..GUG..G...A.C-.-...-A...AG.C.C...GC.U......................GCGGG.UG...G...CAA......CA...G...U...C...A...GGG.C...AGCAGC....AC-...-...-.....................................UCUGACGCG.GCCA.CCGGC..UAA...C-.-.G.G.UG.AC...AGCagCA.............................GUCGC..GCG..AACAAC...A......G...U.GCUUCA....U...G...GA.GUCC..........................GGA.A..AA..U.AUC.....AUGGACCAGCGUCGGGCCAAU.................GCUCAGCGCAACGAUACCC
   NZ_CP074352.1     CAGAU...GCUG.....A..AAG..G...C.AA.U...GC...GG.C.U...CC.G......................GCUGC.AA...A...AAA......UG...A...U...A...AcagCGG.U...GAUAAC....UCU...C...U.....................................GCUGCGUCU.GCCG.CCGGC..GUC...AU.C.C.-.--.--...---..--aauaccggc..........agcaaccgc.-----..GCC..AGCAGC...G......CaucG.UCGUCA....U...C...AU.CGAA..........................UGC.C..GA..U.AUC.....AUGGACCAACGCCGCGCCAAC.................GCGCAGCGUAACGACUACC
   NZ_CP077262.1     CAGAU...GCUG.....A..AAG..G...C.GG.U...AA...UG.C.G...CC.A......................GCAGC.UA...A...---......--...-...G...A...C...UGA.C...AGCAGUu.caAAU...C...U.....................................GCUGCGUCU.GCCA.CCGGC..AAC...GU.C.U.U.CC.GG...---..CA.............................CUGGA..GCA..AGCAAC...A......C...C.UCGUCC....A...C...CA.GUCA..........................GGG.C..GA..U.AUU.....AUGGACCAACGCCGCGCGAAU.................GCGCAGCGUAACGACUACC
   NZ_CP077366.1     CAACU...GAUG.....C..GUG..G...C.GG.U...CA...G-.-.-...AC.U......................---UC.AU...C...GGG......CC...A...G...A...A...UGG.U...------....---...-...-cagaaaggcgcg.............aaugguucuucg-------CU.GCCUgCGCGC..UCC...GA.U.A.G.CA.GU...-GC..CA.............................GCC--..-GC..AAUGAA...A......C...G.UCGUCA....U...A...CA.GUCC..........................GGA.C..AA..C.AUC.....AUGGAUCAGCGUCGGGCAAAU.................GCUCAGCGCAGCGACAGCC
   NZ_CP077392.1     CAGAU...GCUU.....A..AAG..G...C.GG.U...UC...UG.C.A...CC.G......................GCAGC.AA...A...AGA......CA...A...C...A...G...CGG.A...GCCAAC....AAC...C...U.....................................GCUGCGUCU.GCCG.CCAGC..C--...--.U.C.GuCU.GG...CAG..CU.............................CCAGC..GCG..AACACA...A......C...G.CCUUCU....U...C...GA.ACGA..........................UGG.U..GA..C.AUU.....AUGGACCAACGCCGUGCUAAC.................GCGCAGCGUAACGACUACC
   NZ_CP082141.1     CAGCU...GAUG.....C..GUG..G...C.CA.G...GG...GG.C.G...UC.U......................GCCAA.--...-...---......CA...G...C...C...A...GGA.U...GCAAGC....GGUgggC...U.....................................GCUGCGUCU.GCCA.CCGGC..AUC...A-.-.G.G.CA.GU...AAC..GA.............................AC-GC..GCC..AGCGGC...A......G...U.UCGUCG....U...U...CA.GUCC..........................GGA.C..GA..C.AUU.....AUGGAUCAGCGCCGGGUGAAU.................GCUCAGCGUAACGAUACCC
   NZ_CP082346.1     CAGCU...GAUG.....C..GUG..G...C.GG.C...CA...GG.C.A...--.-......................--GGC.GG...-...---......CC...A...G...A...G...CGG.U...C-----....---...-...-agaacaaugcc...............aaucugaugaa------GUU.ACCG.UCGUC..---...AC.C.G.G.GC.AG...CAA..UG.............................CCGGC..CGC..GGCGAC...A......C...U.UCAUCC....U...A...CA.GUCC..........................GGA.C..AG..C.AUC.....AUGGAUCAGCGUCGCGCCAAU.................GCGCUGCGUAACGAUACCC
   NZ_CP082787.1     CAAAU...GCUG.....C..GCG..G...-.--.C...CA...GG.C.C...AA.U......................GCGGC.GG...A...CGG......CG...G...C...A...A...UA-.-...------....---...-...-aggacucuag.................ccugauucgc---------.--CU.CAACC..CCG..cUC.C.G.U.CU.GC...CAG..CA.............................GCGGC..UCC..AGCAGC...C......A...G.-CGUAC....C...G...GC.GA--..........................CGG.U..UC..G.GUC.....AUGGACCAACGCCGGGCGAAU.................GCGCAGCGUGACGA-CACC
   NZ_CP082833.1     CAGAU...GCUG.....A..AAG..G...C.GG.U...AA...UG.C.G...CC.A......................GCGGC.GA...A...ACG......CG...A...U...A...G...CGG.U...UCCGAC....---...C...U.....................................GCUGCGUCU.GCCG.GCGAC..AUC...CU.C.U.U.CC.GG...CAA..UA.............................GUGGA..GCA..AGCAAC...A......C...A.UCGUCC....G...C...CA.CUCA..........................GGG.C..GA..U.AUU.....AUGGACCAACGCCGCGCUAAC.................GCGCAGCGUAACGACUACC
   NZ_CP083448.1     CAGCU...GCUGc..gcA..ACG..G...CcAG.U...CA...GG.C.A...--.-......................GCCAG.AG...C...GGU......C-...A...G...A...A...CAA.-...--CACU....AAC...C...U.....................................GAUGAAA--.-UUG.CCUUC..GUC...GC.U.A.G.GC.AG...C--..-A.............................GUGCC..GAU..CGCAACaguA......A...C.UCAUCU....U...A...UA.GUCC..........................GGA.C..AG..C.GUC.....AUGGACCAGCGUCGCGCAAAC.................GCGCUGCGCAACGAUACCC
   NZ_CP083638.1     CAGAU...GCUG.....A..AAG..G...U.GG.C...AA...UG.C.C...CC.U......................GCGGC.GA...A...GAG......CG...A...U...A...A...CGG.U...GCCAGC....AAU...C...U.....................................GCUGCGUCU.GCCG.CCAGC..CUC...UU.C.C.U.CC.AC...AAC..CA.............................GUGGA..GCA..AGCAAC...A......C...G.UCGUCC....A...C...CA.GUCA..........................GGG.C..GA..U.AUU.....AUGGACCAACGCCGCGCUAAC.................GCGCAGCGUAACGACUACC
   NZ_CP084874.1     CAGAU...GCUG.....A..AAG..G...C.GC.C...GC...UG.C.G...CC.G......................GCAGC.AA...A...GAG......CG...A...U...A...G...CAG.UgacGCCAGC....GAG...C...U.....................................GCUGCGCCU.GCCG.CCAGC..AUC...--.-.C.A.GC.UC...AAG..CA.............................GC---..GCC..AGCACC...U......C...A.UCAACC....U...C...GA.G---cuca.................accggGGG.U..AG..C.AUU.....AUGGACCAACGCCGCGCUAAC.................GCGCAGCGUAACGACUACC
   NZ_CP085627.1     CAGCU...GAUG.....C..GUG..G...C.CA.G...GG...CG.G.U...GCaU......................CUGCC.AG...U...GGU......C-...A...G...G...A...UGG.A...AGCGGC....GGU...C...U.....................................GCUGCGUCU.GCCA.CCGGC..AUC...A-.-.G.G.CA.GU...AAC..GA.............................GC-GC..GCC..AGCGGC...A......G...U.UCGUCG....U...U...CA.GUCC..........................GGA.C..GA..C.AUU.....AUGGAUCAGCGCCGGGUGAAU.................GCUCAGCGUAACGAUACCC
   NZ_CP086253.1     CAGAU...GCUG.....C..GUG..GacaA.GG.U...AG...UG.A.A...AA.U......................---AC.GC...C...AAG......CA...A...U...A...A...CAG.C...AGCAG-....---...-...-c...................................g-CUA-GUCC.ACUG.C----..---...--.-.-.-.--.--...G--..--uuugccug...........gcaacagca.GCGGU..GCG..ACGAAU...A......G...-.CAACCA....A...-...--.----acgcgcag.........cagcaacaaUGG.A..AA..U.AUC.....AUGGAUCAGCGCAGAGCCAAU.................GCGCAGCGUGAUGACUU-C
   NZ_CP087880.1     CAGAU...GCUG.....A..AAG..G...C.GG.G...AA...UA.C.U...UC.C......................GGUGC.AA...A...GAA......CG...A...U...A...AcagCGG.G...GCCAAC....AAC...C...U.....................................GCUGCGUCU.GCCG.CCGGC..GUC...UU.C.C.U.CC.AG...CAA..CA.............................GCGGA..GCG..AGCAAC...U......C...A.UCGUCC....A...C...CA.GUCA..........................GGG.C..GA..C.AUU.....AUGGACCAACGCCGCGCUAAC.................GCGCAGCGUAACGACUACC
   NZ_CP091779.1     CAGAU...GCUG.....A..AAG..G...C.GG.U...UC...UG.C.A...CC.G......................GCUGC.GA...A...AGA......CA...C...C...A...G...CGG.U...GCGAAU....AAC...C...U.....................................GCUGCGUCU.GCCA.CCAGC..CUC...UU.C.A.-.--.GG...CAA..CG.............................CCAGC..GCG..AACACA...A......C...G.CCUUCU....U...C...GA.ACGA..........................UGG.U..GA..C.AUU.....AUGGACCAACGCCGUGCUAAC.................GCGCAGCGUAACGACUACC
   NZ_CP093332.1     CAGAU...GCUG.....A..AAG..G...U.GG.C...UC...UC.A.G...CC.U......................GCAGC.AA...A...GAG......UG...A...CagcA...G...UGG.C...GCGAAU....AAU...C...U.....................................GUUGCGUUU.GCCA.CCUGC..AUC...CG.G.C.U.CU.AG...CAG..CG.............................GUAGC..GCC..AGCACA...C......C...G.UCCUCA....A...C...UA.GUCA..........................GGG.C..GA..U.AUC.....AUGGAUCAGCGCCGCGUGAAC.................GCGCAGCGCACUGAUAACC
   NZ_CP093334.1     CAGAU...GCUG.....A..AAG..G...C.GC.C...GG...UG.C.U...CC.G......................GCGGC.AA...A...GAG......CG...G...U...AgcaG...UGG.C...GCGAGC....GAU...C...U.....................................GCUGCGUCU.GCCG.CCUGC..AUC...--.-.C.A.GC.UC...AAG..CA.............................G---U..GCC..AGCACC...A......C...G.CCGACC....A...C...CA.CGGA..........................CGG.C..AA..C.AUU.....AUGGACCAACGCCGCGCUAAC.................GCGCAGCGUAACGACUACC
   NZ_CP096201.1     CAAAU...GCUG.....A..AAG..G...C.GG.U...AA...CG.C.C...CC.G......................GCAGC.AA...A...GAG......CG...A...U...AgcaG...UGG.U...GCGAAC....AAC...C...U.....................................GUUGCGCCU.GCCG.CCUGC..GUC...--.-.C.U.CU.UC...CAG..CA.............................GCAGC..GCA..AGCAAC...A......C...G.UCGUCU....G...C...CA.GUCA..........................GGG.C..AA..U.AUC.....AUGGACCAACGCCGCGCUAAC.................GCGCAGCGUAACGACUACC
   NZ_CP100494.1     CAGAU...GCUG.....A..AAG..G...C.AA.U...AA...UG.C.C...CC.G......................GCAUC.AA...A...GAG......CG...A...U...A...G...CAG.U...GGCGCG....---...-...-gauu.............................ccuuACUGCGCCU.GCCG.CCUGC..GUC...CU.C.A.U.CC.AG...CAA..CA.............................GCGGC..GCU..AACCGG...C......C...U.GCCUCA....U...C...CA.GCGC..........................UGG.C..GA..C.AUC.....AUGGAUCAGCGCCGUGCGAAU.................GCGCAGCGUAACGAUUACC
   NZ_CP107077.1     CAGAU...GCUG.....A..AAG..G...C.GG.U...AA...CG.C.G...CC.A......................GCGGC.GA...A...GAG......CG...A...CagcA...A...CGG.C...GCAAAU....AAU...C...U.....................................GCUGCGUCU.GCCG.CCUGC..CUCcaaUU.C.C.G.GC.--...-AG..CA.............................ACGCC..AAC..AGCAAU...U......C...G.ACUUCC....U...C...A-.G--C..........................GGG.A..GA..U.AUC.....AUGGAUCAACGCCGCGUCAAC.................GCGCAGCGUAACGACUACC
   NZ_HG322949.1     GAUGA...AAUC.....G..AAG..C...G.GU.C...UU...CG.U.U...GC.G......................GCGGU.CU...U...CGA......UG...-...-...-...-...---.-...------....---...-...-gcgcgguucuugu..........cgaaagcguccggg---------.----.-----..UCG...AA.A.C.C.GC.CG...CAU..U-.............................CGACG..GCC..AGCGAA...U......G...G.UCGACC....A...C...CA.GCUG..........................GGU.C..GG..C.ACCaccggAUUGACCAGCGCCGGGUCGCC.................GCCCUGCGCGGC-GAUCGC
   NZ_LR134201.1     CAGAU...GUUG.....A..AGG..G...-.--.-...-C...GG.C.G...--.-cucag........cagccg...GCCGC.GA...A...GAG......CG...A...C...A...G...CAG.UgcaGCCAGU....AAC...C...U.....................................GCUGCGUCU.GCCG.CCAGC..GU-...--.C.C.A.GC.UC...AAG..CA.............................GCAGU..GCC..AGCACC...U......C...U.UCGUCC....U...C...CU.CGAG..........................UGG.C..GA..U.AUC.....AUGGAUCAGCGUCGUGCUAAC.................GCACUGCGCAACGAUACCC
   NZ_LR134485.1     CAGAU...GCUG.....A..AAG..G...U.GG.U...AA...UG.C.G...CC.A......................GCAGC.GA...A...GAG......CG...A...C...A...G...CAG.U...UC----...aAAU...C...U.....................................GCUGCGUCU.GCCA.CCAGU..AAC...GU.C.U.U.CC.AG...---..CA.............................CUGGG..GCA..AGCAAC...A......C...C.UCGUCC....A...C...CA.GUCA..........................GGG.C..GA..U.AUU.....AUGGACCAACGCCGCGCGAAC.................GCGCAGCGUAACGACUACC
   NZ_LR134494.1     CAAAU...GCUG.....C..GUG..G...C.CA.A...AC...CG.G.C...GC.G......................GCGGC.UG...A...AGG......CA...G...U...A...A...AGA.C...ACCAG-....--C...-...-.....................................-CUG-AUUC.GUCU.CAACC..CCG...CU.C.C.GuCU.GC...CAA..CA.............................GCGGC..GCC..AGCUCC...A......-...G.CAGCCAgcgcA...C...CA.GUAA..........................CGG.C..AC..G.GUC.....AUGGACCAGCGCCGGGCGAAU.................GCGCAGCGUGACGA-CACC
   NZ_LT906479.1     CAAAU...GCUG.....C..GCG..G...-.--.C...CA...GG.C.C...AA.U......................GCGGC.GG...A...CGG......CG...G...C...A...A...UA-.-...------....---...-...-aggacucuag.................ccugauucgc---------.--CU.CAACC..CCG...CC.CcG.U.CU.GC...CAA..CG.............................GCGGC..UCC..AGCAGC...-......C...A.ACGC--....A...C...CG.GCAA..........................CGG.C..UC..G.GUC.....AUGGACCAACGCCGGGCGAAU.................GCGCAGCGUGACGA-CACC


   Structure         (((......)))..........(..(...(.((.(........((.(...............................)))...((...(...(((...........................(((.(...((((((....................................................)))).))...))))........)))...)).).(.(.((.((.......................................)))))..)............................((((.............................................))).)........................((((.((((.....................)))).))))....))))))


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nnr-tsaE-amiB-mutL-miaA-hfq-hflX-hflK-hflC



Position: 9443-9582, Conformation: #0







97% 90% 75% 50% Nucleotide present N N N Nucleotide identify E < 0.1 Base-pair covariation E < 0.05 Helix-level covariation 97% 90% 75%

C A R R U G U G R G G R C G R Y R R Y R R A R Y R R R Y U G C R Y Y Y R Y C R Y C C R Y G Y A R Y R Y Y Y C G R Y R R Y A U Y A U G G A Y C A R C G C C G G C A A Y G C R C A G C G Y R A C G A C C 5'