glpD



Position: 95-229, Conformation: #0







DMS reactivity > 1.0 0.0 0.4 0.7 G/U/No data
Position: 0 (position.label in template: 0.5')5' Position: 1 (position.label in template: 1.G) Reactivity: nanG Position: 2 (position.label in template: 2.C) Reactivity: nanC Position: 3 (position.label in template: 3.A) Reactivity: nanA Position: 4 (position.label in template: 4.U) Reactivity: nanU Position: 5 (position.label in template: 5.C) Reactivity: nanC Position: 6 (position.label in template: 6.A) Reactivity: nanA Position: 7 (position.label in template: 7.A) Reactivity: nanA Position: 8 (position.label in template: 8.U) Reactivity: nanU Position: 9 (position.label in template: 9.G) Reactivity: nanG Position: 10 (position.label in template: 10.G) Reactivity: nanG Position: 11 (position.label in template: 11.U) Reactivity: nanU Position: 12 (position.label in template: 12.G) Reactivity: nanG Position: 13 (position.label in template: 13.C) Reactivity: nanC Position: 14 (position.label in template: 14.U) Reactivity: nanU Position: 15 (position.label in template: 15.G) Reactivity: nanG Position: 16 (position.label in template: 16.G) Reactivity: nanG Position: 17 (position.label in template: 17.U) Reactivity: nanU Position: 18 (position.label in template: 18.A) Reactivity: nanA Position: 19 (position.label in template: 19.U) Reactivity: nanU Position: 20 (position.label in template: 20.C) Reactivity: nanC Position: 21 (position.label in template: 21.G) Reactivity: nanG Position: 22 (position.label in template: 22.C) Reactivity: nanC Position: 23 (position.label in template: 23.G) Reactivity: nanG Position: 24 (position.label in template: 24.G) Reactivity: nanG Position: 25 (position.label in template: 25.C) Reactivity: nanC Position: 26 (position.label in template: 26.A) Reactivity: nanA Position: 27 (position.label in template: 27.G) Reactivity: nanG Position: 28 (position.label in template: 28.A) Reactivity: nanA Position: 29 (position.label in template: 29.C) Reactivity: nanC Position: 30 (position.label in template: 30.G) Reactivity: nanG Position: 31 (position.label in template: 31.C) Reactivity: nanC Position: 32 (position.label in template: 32.C) Reactivity: nanC Position: 33 (position.label in template: 33.G) Reactivity: nanG Position: 34 (position.label in template: 34.C) Reactivity: nanC Position: 35 (position.label in template: 35.U) Reactivity: nanU Position: 36 (position.label in template: 36.G) Reactivity: nanG Position: 37 (position.label in template: 37.G) Reactivity: nanG Position: 38 (position.label in template: 38.A) Reactivity: 1A Position: 39 (position.label in template: 39.C) Reactivity: 1C Position: 40 (position.label in template: 40.G) Reactivity: nanG Position: 41 (position.label in template: 41.C) Reactivity: 1C Position: 42 (position.label in template: 42.G) Reactivity: nanG Position: 43 (position.label in template: 43.G) Reactivity: nanG Position: 44 (position.label in template: 44.U) Reactivity: nanU Position: 45 (position.label in template: 45.U) Reactivity: nanU Position: 46 (position.label in template: 46.U) Reactivity: nanU Position: 47 (position.label in template: 47.A) Reactivity: 1A Position: 48 (position.label in template: 48.U) Reactivity: nanU Position: 49 (position.label in template: 49.C) Reactivity: 0C Position: 50 (position.label in template: 50.C) Reactivity: 0C Position: 51 (position.label in template: 51.G) Reactivity: nanG Position: 52 (position.label in template: 52.U) Reactivity: nanU Position: 53 (position.label in template: 53.G) Reactivity: nanG Position: 54 (position.label in template: 54.C) Reactivity: 0C Position: 55 (position.label in template: 55.U) Reactivity: nanU Position: 56 (position.label in template: 56.G) Reactivity: nanG Position: 57 (position.label in template: 57.A) Reactivity: 1A Position: 58 (position.label in template: 58.U) Reactivity: nanU Position: 59 (position.label in template: 59.G) Reactivity: nanG Position: 60 (position.label in template: 60.C) Reactivity: 0C Position: 61 (position.label in template: 61.U) Reactivity: nanU Position: 62 (position.label in template: 62.G) Reactivity: nanG Position: 63 (position.label in template: 63.G) Reactivity: nanG Position: 64 (position.label in template: 64.A) Reactivity: 0.5A Position: 65 (position.label in template: 65.G) Reactivity: nanG Position: 66 (position.label in template: 66.G) Reactivity: nanG Position: 67 (position.label in template: 67.C) Reactivity: 1C Position: 68 (position.label in template: 68.G) Reactivity: nanG Position: 69 (position.label in template: 69.C) Reactivity: 0.5C Position: 70 (position.label in template: 70.A) Reactivity: 0A Position: 71 (position.label in template: 71.G) Reactivity: nanG Position: 72 (position.label in template: 72.G) Reactivity: nanG Position: 73 (position.label in template: 73.A) Reactivity: 0A Position: 74 (position.label in template: 74.U) Reactivity: nanU Position: 75 (position.label in template: 75.C) Reactivity: 1C Position: 76 (position.label in template: 76.U) Reactivity: nanU Position: 77 (position.label in template: 77.C) Reactivity: 0C Position: 78 (position.label in template: 78.G) Reactivity: nanG Position: 79 (position.label in template: 79.C) Reactivity: 0C Position: 80 (position.label in template: 80.U) Reactivity: nanU Position: 81 (position.label in template: 81.U) Reactivity: nanU Position: 82 (position.label in template: 82.G) Reactivity: nanG Position: 83 (position.label in template: 83.C) Reactivity: 1C Position: 84 (position.label in template: 84.G) Reactivity: nanG Position: 85 (position.label in template: 85.C) Reactivity: 0C Position: 86 (position.label in template: 86.G) Reactivity: nanG Position: 87 (position.label in template: 87.A) Reactivity: 0.5A Position: 88 (position.label in template: 88.C) Reactivity: 0C Position: 89 (position.label in template: 89.C) Reactivity: 0C Position: 90 (position.label in template: 90.U) Reactivity: nanU Position: 91 (position.label in template: 91.C) Reactivity: 0C Position: 92 (position.label in template: 92.U) Reactivity: nanU Position: 93 (position.label in template: 93.U) Reactivity: nanU Position: 94 (position.label in template: 94.C) Reactivity: 0.5C Position: 95 (position.label in template: 95.C) Reactivity: 0C Position: 96 (position.label in template: 96.G) Reactivity: nanG Position: 97 (position.label in template: 97.C) Reactivity: 0C Position: 98 (position.label in template: 98.C) Reactivity: 0C Position: 99 (position.label in template: 99.A) Reactivity: 0.5A Position: 100 (position.label in template: 100.G) Reactivity: nanG Position: 101 (position.label in template: 101.U) Reactivity: nanU Position: 102 (position.label in template: 102.U) Reactivity: nanU Position: 103 (position.label in template: 103.C) Reactivity: 1C Position: 104 (position.label in template: 104.A) Reactivity: 1A Position: 105 (position.label in template: 105.A) Reactivity: 1A Position: 106 (position.label in template: 106.A) Reactivity: 1A Position: 107 (position.label in template: 107.A) Reactivity: 1A Position: 108 (position.label in template: 108.C) Reactivity: 0C Position: 109 (position.label in template: 109.U) Reactivity: nanU Position: 110 (position.label in template: 110.C) Reactivity: 0C Position: 111 (position.label in template: 111.A) Reactivity: 0A Position: 112 (position.label in template: 112.U) Reactivity: nanU Position: 113 (position.label in template: 113.U) Reactivity: nanU Position: 114 (position.label in template: 114.C) Reactivity: 0C Position: 115 (position.label in template: 115.A) Reactivity: 0A Position: 116 (position.label in template: 116.C) Reactivity: 0C Position: 117 (position.label in template: 117.G) Reactivity: nanG Position: 118 (position.label in template: 118.G) Reactivity: nanG Position: 119 (position.label in template: 119.U) Reactivity: nanU Position: 120 (position.label in template: 120.G) Reactivity: nanG Position: 121 (position.label in template: 121.G) Reactivity: nanG Position: 122 (position.label in template: 122.C) Reactivity: 0C Position: 123 (position.label in template: 123.C) Reactivity: 0C Position: 124 (position.label in template: 124.U) Reactivity: nanU Position: 125 (position.label in template: 125.G) Reactivity: nanG Position: 126 (position.label in template: 126.C) Reactivity: 1C Position: 127 (position.label in template: 127.G) Reactivity: nanG Position: 128 (position.label in template: 128.C) Reactivity: 0C Position: 129 (position.label in template: 129.U) Reactivity: nanU Position: 130 (position.label in template: 130.A) Reactivity: 0.5A Position: 131 (position.label in template: 131.C) Reactivity: 0.5C Position: 132 (position.label in template: 132.C) Reactivity: 0.5C Position: 133 (position.label in template: 133.U) Reactivity: nanU Position: 134 (position.label in template: 134.U) Reactivity: nanU Position: 135 (position.label in template: 135.G) Reactivity: nanG Position: 136 (position.label in template: 136.A) Reactivity: 1A Position: 137 (position.label in template: 137.G) Reactivity: nanG Position: 138 (position.label in template: 138.C) Reactivity: 0.5C Position: 139 (position.label in template: 139.A) Reactivity: 0A Position: 140 (position.label in template: 140.C) Reactivity: 0.5C Position: 141 (position.label in template: 141.U) Reactivity: nanU Position: 142 (position.label in template: 142.A) Reactivity: nanA Position: 143 (position.label in template: 143.U) Reactivity: nanU Position: 144 (position.label in template: 144.G) Reactivity: nanG Position: 145 (position.label in template: 145.A) Reactivity: nanA Position: 146 (position.label in template: 146.A) Reactivity: nanA Position: 147 (position.label in template: 147.U) Reactivity: nanU Position: 148 (position.label in template: 148.U) Reactivity: nanU Position: 149 (position.label in template: 149.C) Reactivity: nanC Position: 150 (position.label in template: 150.C) Reactivity: nanC Position: 151 (position.label in template: 151.G) Reactivity: nanG Position: 152 (position.label in template: 152.C) Reactivity: nanC Position: 153 (position.label in template: 153.C) Reactivity: nanC Position: 154 (position.label in template: 154.U) Reactivity: nanU Position: 155 (position.label in template: 155.G) Reactivity: nanG Position: 156 (position.label in template: 156.G) Reactivity: nanG Position: 157 (position.label in template: 157.U) Reactivity: nanU Position: 158 (position.label in template: 158.C) Reactivity: nanC Position: 159 (position.label in template: 159.A) Reactivity: nanA Position: 160 (position.label in template: 160.G) Reactivity: nanG Position: 161 (position.label in template: 161.C) Reactivity: nanC Position: 162 (position.label in template: 162.G) Reactivity: nanG Position: 163 (position.label in template: 163.A) Reactivity: nanA Position: 164 (position.label in template: 164.G) Reactivity: nanG Position: 165 (position.label in template: 165.G) Reactivity: nanG Position: 166 (position.label in template: 166.C) Reactivity: nanC Position: 167 (position.label in template: 167.G) Reactivity: nanG Position: 168 (position.label in template: 168.C) Reactivity: nanC Position: 169 (position.label in template: 169.U) Reactivity: nanU Position: 170 (position.label in template: 170.G) Reactivity: nanG Position: 171 (position.label in template: 171.G) Reactivity: nanG Position: 172 (position.label in template: 172.C) Reactivity: nanC Position: 173 (position.label in template: 173.U) Reactivity: nanU Position: 174 (position.label in template: 174.G) Reactivity: nanG Position: 175 (position.label in template: 175.A) Reactivity: nanA Position: 176 (position.label in template: 176.3')3' 10 20 30 50 100 150


glpD



Position: 95-229, Conformation: #0







Retained alignments:


   NC_003155.5       GCGUGGUC.........GG.C.GCG.GG..UA..C.C.G.C.G.CU...G...G.A..C..............................GCCG.UG.A..C.A.C..GC.GG..C....C.U....G..U.C..C.A...C..A.G..GC..A..U.......................................CG...UC...GA..G...G....C......A...C...G...G...-...-...G...A.C.U.GG.GC...GU...........................................C...C.G..G..C...A...CAU..C..C..A..G...CA..GG...U....C...C...Ag.cA...A..GCUGAUACACGGCGGCCUGCGCUAUCUGGAGAUGCUCGA.C.UU...........................C.GCC.C..U..UGUGCG.C.G....AG.G..................CA.C.U.C.AA.G
   NC_003317.1       GCAUCAAU.........GGcU.GCG.GC..AU..U.G.C.C.C.GU...-...G.A..U..............................GCGG.UG.G..G.G.C..GG.GG..C....U.U....C..A.C..C.G...U..U.G..GG..C..U.......................................GG...CC...GA..G...A....U......G...A...A...C...G...A...U...C.U.G.GC.AA...GC...........................................G...G.C..A..C...C...UCU..U..C..G..C...GC..GC...A....A...C...C...A...A..GCUCAUUCACGGUGGUUUGCGCUAUCUGGAACAUUAUGA.A.UU...........................C.CGG.C..U..GGUGCG.C.G....AG.G..................CG.C.U.G.AU.-
   NC_003911.12      GCAUCAAU.........GGcU.GC-.GG..CA..U.C.G.CaC.GC...-...G.A..U..............................GCGG.CG.G..G.G.C..GG.GG..G....C.U....G..U.C..G.G...U..G.G..CG..U..U.......................................GG...CC...GA..G...A....U......G...A...A...G...G...A...U...C.U.G.GC.CU...GG...........................................G...C.C..A..C...C...UCC..U..C..G..G...CC..UC...G....A...C...C...A...A..GCUGUUUCAUGGCGGGCUGCGCUAUCUGGAGUAUUUCGA.G.UU...........................C.CGU.C..U..GGUGCG.C.G....AG.G..................CG.C.U.G.AU.C
   NC_004310.3       GCAUCAAU.........GGcU.GCG.GC..AU..U.G.C.C.C.GU...-...G.A..U..............................GCGG.UG.G..G.G.C..GG.GG..C....U.U....C..A.C..C.G...U..U.G..GG..C..U.......................................GG...CC...GA..G...A....U......G...A...A...C...G...A...U...C.U.G.GC.AA...GC...........................................G...G.C..A..C...C...UCU..U..C..G..C...GC..GC...A....A...C...C...A...A..GCUCAUUCACGGUGGUUUGCGCUAUCUGGAACAUUAUGA.A.UU...........................C.CGG.C..U..GGUGUG.C.G....AG.G..................CG.C.U.G.AU.-
   NC_004578.1       GCAUCAAU.........GG.U.GUC.GG..CA..U.U.G.C.G.GC...A...G.A..C..............................GCCU.CC.G..G.U.C..GC.GG..C....C.U....U..U.C..G.G...U..U.U..UC..C..U.......................................GU...GC...GA..A...A....A......A...G...A...C...G...A...C...C.U.G.GC.CA...GC...........................................C...A.C..A..C...G...UCC..U..C..A..G...CC..AG...C....A...G...C...A...A..GCUGAUCCACGGUGGCCUGCGCUAUCUGGAGCAUUACGA.A.UU...........................C.CGC.C..U..GGUGCG.U.G....AA.G..................CG.C.U.U.GC.A
   NC_004603.1       GCAUUAAC.........GG.G.GCU.GG..CA..U.U.G.C.A.GC...U...G.A..U..............................GCAG.CU.G..G.C.C..GC.GG..U....U.U....G..A.GugU.C...G..G.U..UU..A..U.......................................AU...G-...-A..A...G....C......U...A...A...C...G...A...U...U.U.U.GC.AU...CA...........................................G...C.A..A..C...G...UCU..U..C..A..G...CA..AG...U....U...C...U...A...A..ACUUAUUCACGGUGGAUUACGCUACCUUGAACACUACGA.G.UU...........................U.CGU.U..U..GGUUUC.G.G....AA.G..................CG.C.U.C.GC.-
   NC_005126.1       GGAUCAAC.........GG.U.GCC.GG..AA..U.U.G.C.A.GC...A...G.A..U..............................GCUG.CU.G..G.C.C..GG.GG..G....C.U....C..U.C..U.G...U..U.C..UA..U..U.......................................GC...UG...GA..A...G....C......A...C...A...A...G...A...C...U.U.A.GC.CA...AA...........................................G...C.C..A..C...A...UCA..U..C..C..U...CC..AG...U....U...C...A...A...A..AUUGAUCCACGGUGGCUUACGCUAUCUAGAACACUAUGA.A.UU...........................C.CGU.U..U..GGUCAG.U.G....AA.G..................CG.C.U.G.GC.A
   NC_005966.1       GCAUUAAU.........GG.U.AUU.GG..UA..U.U.G.C.C.AA...U...G.A..U..............................GCUG.CU.G..G.A.A..GG.GG..C....C.U....A..U.C..G.G...U..U.U..UU..U..U.......................................GU...GU...GA..A...A....A......A...G...A...U...G...A...U...U.U.U.GC.UA...GC...........................................C...A.C..A..C...A...UCU..U..C..U..G...CC..AG...C....A...G...U...A...A..AUUAAUUCAUGGUGGAUUGCGAUAUCUGGAGCAUUAUGA.A.UU...........................U.CGU.U..U..GGUACG.A.G....AG.G..................CU.U.U.A.GC.A
   NC_006177.1       GGAUCACG.........GG.G.GCC.GG..CG..U.C.G.C.C.--...-...-.-..-cg........................cga.--GG.CU.G..C.C.C..UC.CG..C....G.G....C..C.U..G.A...A..G.G..UG..G..G.......................................CC...UC...GU..G...G...aG......G...C...C...A...G...Cg.aC...U.U.C.GC.CU...UC...........................................G...C.C..A..C...C..aGCA..G..C..C..G...CU..C-...C....A...C...C...A...A..GCUGAUCCACGGCGGCCUGCGCUACCUGAAGAACUUCGA.G.UU...........................C.CGC.C..U..CGUCCG.G.G....AG.U..................CG.G.U.G.GU.G
   NC_007406.1       GCAUCAAC.........GGcU.GCG.G-..GA..U.C.G.CgC.GC...-...G.A..C..............................GCGG.CC.G..G.G.C..GU.GG..C....A.A....C..U.C..G.G...U..C.U..UC..C..U.......................................GU...GU...GA..A...A....U......G...A...A...C...G...A...C...C.U.C.GC.GA...GU...........................................G...G.C..A..C...C...UCG..U..C..A..G...GA..UC...G....A...C...C...A...A..GCUGGUGCAUGGCGGACUGCGUUAUCUGGAAUAUUACGA.G.UU...........................C.CGC.C..U..GGUUCG.C.G....AA.G..................CC.C.U.G.AU.C
   NC_007481.1       GCGUUAAU.........GG.C.ACU.GG..UA..U.U.G.C.G.GC...U...G.A..C..............................GCCG.CC.G..G.U.A..GA.GG..C....U.U....A..A.A..A.G...U..A.U..UA..C..U.......................................GU...GU...GA..G...C....A......A...A...A...U...G...A...U...U.U.A.GC.CU...CU...........................................G...C.U..A..C...A...UCA..U..C..A..A...GU..AG...C....A...G...U...A...A..ACUUAUUCAUGGUGGACUACGCUAUUUAGAGCAUUACCA.A.UU...........................U.AGG.C..U..AGUAAA.A.G....AG.G..................C-.-.-.-.AC.U
   NC_007510.1       GCAUCAAC.........GG.C.GCG.GG..CA..U.C.G.CgC.GC...-...G.A..U..............................GCGG.CC.G..G.C.C..GC.GG..C....C.U....G..U.C..G.G...U..C.A..UG..C..U.......................................CU...GC...GA..G...C....A......G...G...A...C...G...A...U...C.U.C.GCgUC...GC.........................................acA...C.G..U..C...G...UCG..U..C..C..A...GC..A-...-....-...C...G...A...A..GCUGAUUCACGGCGGCCUGCGUUACCUCGAGUACAACGA.G.UU...........................C.GGG.C..U..CGUGCG.C.A....AG.G..................CG.C.-.U.GC.A
   NC_007519.1       GCAUCAAC.........GG.U.GCC.UC..CG..C.G.G.CcC.GC...-...G.A..U..............................GCGG.CC.G..G.C.C..GA.GG..G....C.U....U..U.C..C.G...U..U.G..CA..C..U.......................................CU...GC...GA..G...G....C......C...G...A...A...G...A...C...A.U.A.GG.CU...GG...........................................G...C.A..A..C...G...UCC..U..C..C..G...CG..UC...G....U...C...C...A...A..GCUUAUUCACGGCGGCCUGCGCUAUCUUGAACACUAUGA.A.UU...........................C.AGA.C..U..GGUGCG.C.G....AA.G..................CC.C.U.G.GC.G
   NC_007645.1       GCAUCAAU.........GG.C.GUC.GG..CG..U.C.G.C.C.GU...A...G.A..C..............................GCCC.AG.G..G.C.C..GC.GG..A....U.Ug.caA..A.C..C.G...C..C.U..U-..-..-.......................................AG...UG...GA..A...A....U......G...C...G...C...G...A...U...C.U.C.GC.AU...GG...........................................G...C.C..A..C...C...UCU..U..C..C..G...CC..AG...C....A...G...U...A...A..AUUGAUUCACGGCGGCCUGCGUUAUCUCGAGCAUUAUGA.A.UU...........................C.AGA.U..U..GGUGAA.A.G....AA.G..................C-.-.-.-.GC.U
   NC_007712.1       GGAUCAAC.........GG.U.ACC.GG..CA..U.C.G.C.U.UC...C...G.A..C..............................GCUG.CC.G..G.G.C..GC.GG..A....C.U....G..U.C..C.G...U..A.U..UA..U..U.......................................GC...UG...GA..A...G....C......G...C...A...G...G...A...U...U.U.G.GC.GU...GC...........................................G...C.C..A..C...C...UCU..U..C..C..G...CC..AG...C....U...C...C...A...A..ACUUAUUCACGGCGGCCUGCGCUAUCUCGAACAUUAUGA.G.AU...........................U.CGU.U..U..GGUGAG.C.G....AA.G..................CU.C.U.G.GC.U
   NC_007794.1       GCGUCAAC.........GG.C.UGC.GG..CA..U.C.G.C.CcGC...-...G.A..U..............................GCCG.CA.G..G.A.C..GC.GG..G....G.C....A..A.G..U.G...U..G.C..UG..C..U.......................................GC...UC...GA..G...G....C......C...A...A...C...G...A...C...C.U.C.GC.GA...GC...........................................G...G.C..A..C...C...UCG..U..C..C..AauuCC..AG...-....-...-...C...A...A..GCUCAUCCACGGCGGCCUGCGCUAUCUCGAACACUACGA.G.UU...........................C.GGC.C..U..CGUGCG.C.G....AA.G..................CG.C.U.G.UC.U
   NC_007951.1       GGAUCAAC.........GG.C.GCC.GG..CA..U.C.G.CuC.GC...-...G.A..C..............................GCGG.CG.G..G.C.C..GC.GG..C....C.U....G..U.C..G.G...U..U.C..UG..C..U.......................................GU...GC...GA..A...C....A......G...G...A...C...G...A...U...C.U.G.GC.-G...GC...........................................G...CaU..A..C...G...UCG..U..C..G..G...CC..AG...U....A...C...C...A...A..GCUGAUUCACGGCGGCCUGCGCUAUCUGGAAUACCGCGA.G.UU...........................C.GGG.C..U..GGUGCG.C.A....AA.G..................CC.CuG.C.A-.-
   NC_007963.1       GCAUCAAU.........GG.C.ACC.GG..UA..U.C.G.C.C.AA...C...G.A..U..............................GCUG.CC.G..G.U.C..GC.GG..C....C.U....G..C.-..-.G...U..G.U..CG..C..-.......................................CC...UG...AG..C...G....Ag...caG...C...G...U...G...A...C...C.U.G.GC.CA...GC...........................................G...C.C..A..C...C...UCG..U..C..G..G...CG..AG...C....A...G...C...A...A..GCUGAUCCACGGCGGACUUCGCUAUCUCGAACACCGCGA.G.UU...........................U.CGC.C..U..GGUCAG.G.G....AG.G..................CG.C.U.G.CA.C
   NC_007964.1       GCAUUAAC........gGG.U.GCG.GG..-A..U.C.G.CgC.GC...-...G.A..C..............................GCGG.CG.G..G.U.C..GC.GG..C....A.A....U..U.C..G.G...U..C.U..UC..C..U.......................................GU...GC...GA..A...A....U......G...A...A...C...G...A...U...C.U.C.GC.CA...GC...........................................G...G.C..A..C...C...UCG..U..C..G..C...UG..UC...G....A...C...C...A...A..GCUCGUACAUGGCGGGCUGCGCUAUCUCGAAUAUUAUGA.A.UU...........................C.CAU.C..U..GGUUCG.C.G....AG.G..................CG.C.U.G.AU.C
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   NC_012988.1       GCAUCAAC.........GG.C.GCC.GG..CA..U.C.G.C.C.CG...U...G.A..U..............................GCCG.CC.G..G.C.C..GG.GG..C....U.U....G..C.G..C.G...U..C.C..UG..C..U.......................................G-...UG...CG..A...G....C......G...G...G...G..cG...A...U...C.U.G.G-.--...--ccg...................................aac..-...A.C..A..C...U...UCC..U..C..G..G...CC..UC...G....A...C...C...A...A..ACUGAUCCAUGGCGGCCUGCGCUACCUCGAACAGUACGA.G.UU...........................C.CGG.C..U..CGUGCG.C.G....AG.G..................CG.C.U.G.GC.C
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   NC_013456.1       GCAUUAAC.........GG.G.GCU.GG..UA..U.U.G.C.G.GC...A...G.A..C..............................GCAG.CU.G..G.C.C..GC.GG..U....U.U....G..A.G..U.G...U..U.G..-G..C..U.......................................UA...UA...CG.aA...G....C......A...A...G...U...G...A...C...U.U.U.GC.GU...CC...........................................G...C.U..A..C...U...UCU..U..C..G..G...CA..AG...U....U...C...U...A...A..ACUGAUCCACGGCGGUUUACGCUACCUUGAACACUACGA.G.UU...........................U.CGU.U..U..GGUUUC.G.G....AA.G..................CG.C.U.C.GC.-
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   NC_013739.1       GCGCCGUC.........GG.C.GCG.GG..GG..C.G.G.C.G.CU...C...G.A..C..............................GCCG.UC.A..C.G.C..GC.GG..G....C.U....G..U.C..G.G...U..C.G..CG..C..U.......................................GG...UC...GA..G...G....C......G...C...G...C...G...A...C...U.U.C.GC.CU...CC...........................................G...G.C..A..C...G...UCG..A..-..-..G...CC..GC...U....C...C...Ag.cA...A..GCUGAUCCACGGCGGCCUGCGCUACCUCGAGCAGCUCGA.C.UU...........................C.AGA.C..U..CGUGCG.C.G....AG.G..................CG.C.U.G.AG.A
   NC_013861.1       GCAUCAAU.........GG.A.UCU.GG..UU..G.U.G.C.U.GC...U...G.A..U..............................GCGG.CA.C..U.A.A..GA.GG..A....U.U....G..U.C..U.G...U..G.G..UG..C..U.......................................UU...UU...GA..A...C....A......A...G...A...U...G...A...C...U.U.G.GC.CU...CC...........................................A...A.A..A..C...A...UCC..U..C..A..A...GC..AG...C....A...C...G...A...A..ACUUAUUCAUGGUGGAUUAAGAUAUUUAGAACAUUAUGA.A.UU...........................U.AAC.C..U..GGUUAA.A.A....AA.G..................CA.C.U.C.AU.U
   NC_013961.1       GCAUUAAU.........GG.U.GCC.GG..CA..U.C.G.C.G.GC...U...G.A..U..............................GCCG.CC.G..G.G.C..GC.GG..G....C.U....G..U.C..G.G...U..G.C..UG..A..U.......................................GC...UG...GA..G...G....C......G...C...A...A...G...A...U...C.U.C.GC.CU...GC...........................................G...C.C..A..C...C...UCU..U..C..C..G...CC..AG...U....U...C...A...A...A..ACUGAUCCACGGCGGCCUGCGCUAUCUGGAACACUACGA.A.UU...........................C.CGC.C..U..GGUCGG.C.G....AA.G..................CG.C.U.G.GC.C
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   NC_014117.1       GGAUCAAC.........GG.C.GCC.GG..CA..U.C.G.C.CcGC...-...G.A..C..............................GCGG.CC.G..G.C.C..GU.GG..U....C.U....G..U.C..G.G...U..G.C..UG..C..U.......................................GU...GC...GA..A...C....A......G...G...A...C...G...A...U...C.U.G.GC.-C...GC...........................................G...CaC..A..C...G...UCG..U..C..G..G...CG..AG...C....A...C...C...A...A..GCUGAUCCACGGCGGGCUGCGCUACCUCGAGUACCGCGA.G.UU...........................C.GGG.C..U..CGUGCG.C.A....AG.G..................CG.C.-.U.GC.A
   NC_014151.1       GCGUCACC.........GG.U.GCG.GG..CA..U.C.G.C.G.CU...C...G.A..C..............................GCCG.UC.A..C.G.C..GC.GG..C....C.U....G..U.C..C.A...C..C.G..CC..G..U.......................................CG...UC...GA..G...G....G......G...C...-...-...-...-...-...-.-.-.--.--...--aggacugggcg..................ucggguacgucg..-...-.-..-..-...-...---..-..-..A..G...CC..GG...U....C...G...Ag.cA...A..GCUCGUGCACGGCGGCCUGCGCUACCUGCAGAUGCUCGA.C.UU...........................C.CAC.C..U..GGUGCG.C.G....AG.G..................CC.C.U.C.AC.G
   NC_014168.1       GCGUCGUC.........GG.A.GCG.GG..CG..C.G.G.C.C.CU...G...G.A..C..............................GCGG.CG.A..C.A.C..GC.GG..G....C.U....C..U.C..C.G...U..C.G..CC..C..U.......................................CA...UC...GA..G...G....C......-...-...G...A...G...G...G...A.C.U.GG.GC...UU...........................................C...C.G..G..C...A...CCU..C..C..A..G...CC..GG...Uc..cU...C...G...A...A..AAUGUUCCACGGCGGCCUGCGCUAUCUCGAACAGCUGGA.A.UU...........................C.GGG.C..U.gGUGC-G.C.G....AG.G..................CG.U.U.G.CA.C
   NC_014217.1       GCAUCAAU.........GGcU.GCG.G-..CA..U.U.G.CcC.GC...-...G.A..U..............................GCCG.CC.G..G.G.C..GC.GG..G....G.U....C..U.C..G.G...U..C.G..UG..C..U.......................................GC...UC...GA..A...C....A......G...G...G...C...G...A...C...U.U.C.GC.CG...GC...........................................G...C.C..A..C...G...UCC..U..C..C..G...CC..UC...G....A...C...C...A...A..GCUGAUUCAUGGCGGCCUGCGCUAUCUCGAGCACUAUGA.G.UU...........................C.CGG.C..U..GGUGCG.C.G....AA.G..................C-.C.U.U.GA.U
   NC_014259.1       GUAUUAAU.........GG.C.GUC.GG..UA..U.U.G.C.U.AA...U...G.A..U..............................GCGG.CA.G..G.U.C..GG.GG..C....U.U....A..U.C..G.G...U..A.U..UU..U..U.......................................AU...GU...GA..A...A....A......A...G...A...U...G...A...U...U.U.A.GC.UA...GU...........................................C...A.C..A..C...C...UCA..U..C..U..G...CG..AG...C....A...G...U...A...A..AUUAAUUCACGGCGGUUUACGCUACUUAGAACAUAAAGA.A.UU...........................U.CGG.U..U..GGUUAG.A.G....AA.G..................CU.U.U.A.GC.A
   NC_014306.1       GCAUCAAC.........GG.C.GCU.GG..CA..U.U.G.C.G.GC...U...G.A..U..............................GCUG.CA.G..G.A.C..GC.GG..C....C.U....G..U.C..U.G...U..G.C..UG..A..U.......................................GC...UG...GA..A...G....C......G...C...A...A...G...A...U...U.U.G.GC.CU...GC...........................................G...C.G..A..C...C...UCU..U..C..C..G...CC..AG...C....U...C...C...A...A..ACUUAUCCACGGUGGCCUGCGCUACCUGGAGCAUUACGA.A.UU...........................C.CGU.C..U..GGUCAG.C.G....AA.G..................CG.C.U.G.GC.A
   NC_014313.1       GUAUCAAC.........GG.C.GCG.GG..CA..U.C.G.C.U.GC...C...G.A..C..............................GCGG.CG.A..U.G.C..GC.GG..A....C.U....G..C.G..C.G...U..G.A..UG..C..U......................................gGC...UG...A-..A...G....C......C...G...A...C...G...A...U...C.U.U.GC.CG...GC...........................................G...C.G..A..C...G...UCG..U..C..G..G...CG..AG...U....U...C...G...A...A..GCUCAUUCAUGGCGGGCUUCGGUAUCUCGAACACUAUGA.G.UU...........................C.CGU.C..U..UGUUCG.U.G....AA.G..................CG.C.U.G.GC.G
   NC_014391.1       GCGUCACC.........GG.A.GCG.GG..CG..C.C.G.C.G.CU...C...G.A..C..............................GCCG.CC.U..C.C.C..GA.GG..G....C.Ug.aaG..G.U..C.G...C..C.C..UG..G..U.......................................GG...--...-A..G...G....C......G...C...G...-...-...-...-...-.-.-.-C.--...--gacua..............................cgccgc..C...G.G..-..C...A...CGU..C..C..A..G...CC..GG...U....C...C...Ag.cA...A..GCUGAUCCACGGCGGCCUGCGCUACCUGGAGCAGCUGGA.G.UU...........................C.CAC.C..U..GGUCCA.C.G....AG.G..................CG.C.U.G.AC.C
   NC_014500.1       GCAUUAAC.........GG.U.ACC.GG..CA..U.A.G.C.G.GC...G...G.A..U..............................GCCG.CC.G..G.G.C..GC.GG..G....C.U....G..U.C..C.G...U..U.C..UG..U..U.......................................GC...UG...GA..A...G....C......G...C...A...G...G...A...U...U.U.A.GC.CU...GC...........................................G...C.C..A..C...C...UCU..U..C..C..G...CC..AG...C....U...C...A...A...A..ACUGAUUCAUGGCGGCCUGCGCUACCUGGAACACUAUGA.G.UU...........................C.CGG.C..U..GGUGGG.G.G....AA.G..................CG.C.U.G.UC.C
   NC_014532.2       GCAUCAAC.........GG.C.ACC.GG..UA..U.C.G.C.G.GC...C...G.A..U..............................GCCA.GC.G..G.C.C..GC.GG..C....C.U....C..U.C..G.G...U..-.-..--..-..-cgcg............................cuaug..--...-C...GA..A...C....A......G...G...C...C...G...A...C...C.U.G.GC.CA...GC...........................................G...C.C..A..C...U...UCC..U..C..G..G...CC..AG...C....A...G...C...A...A..GCUGAUCCAUGGCGGCCUGCGCUACCUGGAACACCACGA.A.UU...........................C.CGA.C..U..CGUCAG.G.G....AA.G..................CU.C.U.GcGC.-
   NC_014541.1       GCAUCACC.........GG.G.GCG.GG..CA..U.U.G.C.CcGC...-...G.U..C..............................GCGG.CC.C..A.A.C..GG.GG..C....U.A....U..C.G..C.A...C..C.C..UG..C..U.......................................GC...UG...--..G...A....C......C...G...U...Gg.cG...A...U...C.U.G.GC.CG...GU...........................................G...G.C..A..C...C...UCU..A..A..U..U...UC..AG...C....U...C...C...A...A..GAUGGUGCACGGUGGCCUGCGCUACCUCGGCCAGGGCCA.C.UU...........................C.CGC.C..U..GACCCG.A.C....--.-..................--.-.-.-.--.-
   NC_014643.1       GCAUUACU.........GG.U.GCC.GG..UA..U.U.G.C.C.CU...U...G.A..U..............................GCGG.CG.A..C.U.C..GC.GG..C....C.U....A..C.G..C.A...C..A.-..-G..G..U.......................................AU...UG...UG..G...A....G......G...C...C...G...G...G...G...A.C.U.GG.--...--gcugc...............................gggca..C...C.A..G..C...G...CUU..G..-..-..G...UC..--...C....U...C...A...A...A..ACUUAUUCACGGUGGCCUACGUUACCUCUAUAACCUAGA.U.UU...........................C.AAA.C..U..CGUAAC.C.G....AG.G..................CU.C.U.C.AA.G
   NC_014722.1       GCAUCAAU.........GG.C.GCG.GG..CA..U.U.G.C.G.CG...A...G.A..-..............................CGCGaCA.G..G.G.C..GU.GG..A....C.U....A..A.A..G.G...U..G.C..U-..-..-.......................................GC...UA...UG..C...G....A......G...C...A...A...G...A...C...-.-.-.--.--...--gaccuugc........................ggcgcacac..-...-.-..-..-...-..gUCC..U..C..G..G...CC..AG...C....A...C...G...A...A..GCUGAUCCAUGGCGGGCUGCGCUAUCUCGAAUACUACGA.G.UU...........................C.GGA.C..U..GGUC--.-.-....AG.G..................AA.A.G.C.GC.U
   NC_015186.1       GCAUCAAU.........GGcU.GC-.GG..CA..U.C.G.CgC.GC...-...G.A..U..............................GCGG.CG.G..G.G.C..GC.GG..C....U.G....G..U.C..G.G...U..C.U..UU..C..U.......................................CU...GC...GA..G...G....C......G...G...G...C...G...A...U...C.U.C.GG.CG...GC...........................................G...C.C..A..C...C...UCG..G..C..G..G...CC..UC...G....A...C...C...A...A..AUUGAUCCAUGGCGGCCUGCGCUAUCUCGAAUAUUACGA.G.UU...........................C.CGG.C..U..GGUGCG.C.G....AG.G..................CG.C.U.G.AU.-
   NC_015259.1       GCAUCAAC.........GGcU.GC-.GG..CA..U.C.G.C.G.CG...C...G.A..C..............................GCCG.CC.G..G.G.C..GC.GG..G....C.U....U..U.C..G.G...U..C.G..CG..C..U.......................................GG...CG...GA..G...C....A......G...G...G...C...G...A...U...C.U.C.GC.CU...CG...........................................G...C.G..A..C...C...UCG..U..C..G..G...CC..UC...G....A...C...C...A...A..GCUGUUCCACGGCGGCCUGCGCUAUCUGGAAUAUUUCGA.G.UU...........................C.CGC.C..U..CGUGCG.C.G....AG.G..................CA.U.U.G.AU.C
   NC_015276.1       GAAUUAAC.........GG.C.ACA.GG..CA..U.U.G.C.A.GC...A...G.A..U..............................GCCG.CA.G..G.A.C..GC.GG..C....C.U....AucU.G..U.C...G..G.U..UU..A..U.......................................GU...GA...AA..U...G....C......G...C...-...-...G...A...U...C.U.U.GC.CA...GC...........................................G...C.C..A..C...C...UCC..U..C..U..G...CA..AG...C....A...G...C...A...A..GUUAAUUCAUGGCGGAUUACGCUAUUUAGAACAUUACGA.G.UU...........................U.CGU.U..U..GGUAAA.A.G....AA.G..................CC.U.U.A.AG.C
   NC_015434.1       GCGUGACC.........GG.U.GCG.GG..CG..C.G.G.C.C.GU...C...G.A..C..............................GCCG.CG.U..C.G.C..GA.GG..G....C.U....G..-.-..-.-..aA..G.G..UG..G..C.......................................CCuggUG...GA..G...G....C......G...C...G...G...G...A...C...U.U.C.GC.-G...GC...........................................-...C.G..G..C...A...CCU..C..C..A..G...CC..GG...U....C...C...Ag.cA...A..GCUGAUCCACGGCGGCCUGCGCUACCUGGAACAGUUGGA.G.UU...........................C.AAC.C..U..GGUGCA.C.G....AG.G..................CG.C.U.G.AC.C
   NC_015514.1       GUGUCACC.........GG.C.GCG.GG..CA..U.C.G.C.G.CU...C...G.A..C..............................GCCG.UC.A..C.C.C..GC.GG..G....C.U....G..U.C..C.A...C..C.G..CG..A..U.......................................CG...UC...GA..G...G....C......C...C...A...G...G...A...C...U.G.G.GC.GA...GC...........................................G...G.C..A..C...G...UC-..-..G..A..G...CC..GC...U....C...C...Ag.cA...A..GCUCGUGCACGGCGGCCUGCGCUACCUGCAGAUGCUCGA.C.UU...........................C.CAC.C..U..CGUGCG.C.G....AG.G..................CG.C.U.C.AC.C
   NC_015554.1       GUGUAAAU.........GG.U.GCC.GG..AG..U.A.G.C.A.UU...A...G.A..U..............................GCAG.CC.G..G.C.C..GC.GG..A....C.U....U..U.C..G.G...U..A.G..CA..C..U.......................................AU...GU...GA..A...A....A......A...G...G...C...G...A...U...C.U.U.GC.AG...GU...........................................G...C.A..A..C...G...UCU..U..C..C..U...CU..AG...C....A...G...C...A...A..GUUAAUACAUGGUGGUUUACGCUAUUUAGAGCAUUAUGA.G.UU...........................C.CGC.C..U..UGUGAA.A.G....AA.G..................CG.C.U.C.GC.U
   NC_015559.1       GCAUCAAC.........GG.U.ACA.GG..CA..U.U.G.C.G.GC...A...G.A..C..............................GCCG.CU.G..G.A.C..GU.GG..A....U.U....A..U.C..C.G...U..-.-..--..-..-uggc............................cugug..--...--..uGA..A...A....U......G...G...G...A...G...A...U...C.U.U.GC.AC...AC...........................................G...C.C..A..C...C...UCU..U..C..A..U...CC..AG...U....A...G...U...A...A..GCUCAUUCAUGGUGGAUUACGUUAUCUAGAACAUUACGA.A.UU...........................U.CGU.C..U..UGUCAA.A.G....AA.G..................CU.C.U.A.AA.C
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   NZ_LT605585.1     GCAUCAAU.........GGcU.GCG.GC..AU..U.G.C.C.C.GU...-...G.A..U..............................GCGG.UG.G..G.G.C..GG.GG..C....U.U....C..A.C..C.G...U..U.G..GG..C..U.......................................GG...CC...GA..G...A....U......G...A...A...C...G...A...U...C.U.G.GC.AA...GC...........................................G...G.C..A..C...C...UCG..U..C..G..C...GC..GC...C....A...C...C...A...A..GCUCAUUCAUGGCGGCUUGCGCUAUCUGGAACAUUAUGA.A.UU...........................C.CGG.C..U..GGUGCG.C.G....AG.G..................CG.C.U.G.AU.-
   NZ_LT605586.1     GCAUCAAC.........GG.U.GCG.GG..CG..U.G.G.C.CcGC...-...G.A..C..............................GCGG.CC.G..G.G.C..GC.GG..C....C.U....C..A.A..G.G...U..C.G..UG..C..U.......................................GG...C-...--..G...Ga.aaA......G...G...A...C...G...A...U...C.U.G.GC.GC...AA...........................................G...G.C..A..C...A...UCA..U..C..G..C...GC..UC...C....G...G...C...A...A..GCUGGUGCAUGGCGGUUUGCGCUAUCUCGAAUAUUACGA.G.UU...........................C.CGC.C..U..UGUGCG.C.G....AA.G..................CG.C.U.G.AU.C
   NZ_LT615367.1     GCAUUAAC.........GG.C.GCA.GG..UA..U.C.G.C.A.GC...A...G.A..U..............................GCCG.CC.G..G.G.C..GU.GG..C....U.U....G..U.C..G.G...U..G.C..UG..U..U.......................................AC...UU...GA..A...G....C......A...C...A...G...G...A...C...C.U.G.GC.CA...GC...........................................G...C.C..A..C...C...UCU..U..C..C..G...CC..AG...U....U...C...C...A...A..ACUGAUUCACGGUGGCCUGCGCUAUCUGGAGCACUAUGA.G.UU...........................C.CGU.C..U..GGUCAG.U.G....AA.G..................CG.U.U.G.UC.A
   NZ_LT853882.1     GCAUCAAU.........GG.G.GUC.GG..CA..U.C.G.C.CcGC...-...G.A..U..............................GCGG.CC.G..G.C.C..GC.GG..C....C.U....G..U.C..G.G...U..G.U..GC..C..U.......................................GU...GC...GA..G...-....-......-...-...-...-...-...-...-...-.-.-.--.--...--caggacgaucuggcc...........gcgcauaccagcagc..-...-.-..-..-...-...---..-..-..-..G...CC..AG...C....A...C...C...A...A..ACUCAUCCACGGCGGCCUGCGCUAUCUGGAGCAGUACGA.A.UU...........................C.-GCgC..U..GGUCGG.C.A....AG.G..................CG.C.U.G.GC.C
   NZ_LT855380.1     GCAUCAAU.........GG.C.GUC.GG..UA..U.U.G.C.G.GC...A...G.A..C..............................GCCU.CC.G..G.G.C..GC.GG..C....C.U....G..U.C..G.G...U..C.U..UC..C..U.......................................GU...GC...GA..G...A....A......A...G...A...C...G...A...C...C.U.U.GC.CA...GC...........................................C...A.C..A..C...C...UCG..U..C..G..G...CC..AG...C....A...G...C...A...A..GCUGAUCCACGGUGGGCUGCGCUAUCUGGAACACUACGA.A.UU...........................C.CGU.C..U..GGUACG.U.G....AA.G..................CA.C.U.G.GC.A
   NZ_LT906435.1     GCAUCAAC.........GG.C.ACC.GG..UA..U.C.G.C.G.CG...U...G.A..U..............................GCCG.CC.G..G.U.C..GC.GG..U....C.U....G..C.G..C.G...U..A.U..UG..C..U......................................uGU...CG...AGcaG...G....-......-...-...A...C...G...A...U...C.U.G.GC.GU...-C...........................................G...CaC..A..C...G...UCG..U..C..G..G...CC..AG...U....A...C...C...A...A..GCUGAUCCACGGCGGUCUGCGCUAUCUCGAGUACUACGA.A.UU...........................C.GGA.C..U..GGUGCG.C.A....AA.-..................--.-.G.C.GC.U
   NZ_LT906442.1     GCAUCAAU........gGG.U.GCG.GA..UG..U.-.G.C.A.GC...U...G.A..U..............................GCCG.CA.U..U.A.A..GA.GG..U....U.U....G..U.C..C.G...U..C.A..UA..U..U.......................................GU...UU...GA..A...C....A......G...G...A...U...G...A...U...U.U.A.GC.CU...CA...........................................A...A.A..A..C...C...UCU..U..C..C..A...GU..AG...C....A...C...A...A...A..ACUCAUCCAUGGGGGGCUUCGAUAUUUAGAGCAUUAUGA.G.UU...........................U.AAG.C..U..AGUAAA.A.A....AA.G..................CC.U.U.A.GA.A
   NZ_LT906451.1     CA-UCAAU.........GG.C.UGU.GG..UA..C.A.G.C.U.GC...C...G.A..U..............................GCUG.CG.C..U.G.C..GU.GG..U....U.U....G..U.C..A.G...U..C.A..UC..C..U.......................................UU...UG...GA..A...A....A......A...G...A...U...G...A...C...C.U.U.GC.UU...CU...........................................A...A.A..A..C...C...UCA..U..C..C..A...GU..AG...C....A...G...U...A...A..AUUAAUUCAUGGUGGAUUACGCUAUCUUGAACACUACGA.U.UU...........................U.CGG.U..U..GGUCAA.A.A....AA.G..................CG.U.U.G.GA.U
   NZ_LT906479.1     GCAUCAAC.........GG.U.GCC.GG..CA..U.C.G.C.G.GC...G...G.A..U..............................GCUG.CC.G..G.G.C..GC.GG..G....C.U....A..U.C..G.G...U..A.C..UG..C..U.......................................AC...UG...GA..A...G....C......G...C...A...A...G...A...C...U.U.G.GC.CU...GU...........................................G...C.U..A..C...G...UCU..U..C..C..G...CC..AG...U....U...C...C...A...A..ACUGAUCCACGGCGGCCUGCGCUACCUGGAACACUAUGA.A.UU...........................C.CGU.C..U..GGUGAG.C.G....AA.G..................CG.C.U.G.GC.C
   NZ_LT907988.1     GCAUCAAC.........GG.G.GCC.GG..GA..U.C.G.UgC.GC...-...G.A..U..............................GCGG.CC.G..G.C.C..GG.GG..C....C.U....G..A.A..G.G...U..G.C..UG..C..U.......................................GUg.cGA...AC..G...-....C......G...-...G...C...G...A...C...C.U.G.GC.CC...AG...........................................G...C.C..A..C...C...UCG..U..C..G..U...CC..AG...C....A...G...C...A...A..GCUGGUGCACGGCGGCCUGCGCUACCUGGAGAACCGCGA.G.UU...........................C.CGG.C..U..GGUGCG.C.G....AA.G..................CG.C.U.G.GC.C
   NZ_LT960614.1     GCAUCAAU.........GGcU.GC-.GG..CA..U.C.G.C.A.AG...G...G.A..U..............................GCCG.CC.G..G.C.C..GC.GG..A....U.A....U..U.C..C.G...U..U.U..GC..C..U.......................................CG...CC...GA..G...A....C......G...A...A...G...G...A...U...U.U.C.GC.CA...GC...........................................G...G.C..A..C...C...UCC..U..C..C..G...GC..UC...G....A...C...C...A...A..GCUCAUUCACGGCGGCCUGCGUUAUCUGGAGCAUUACGA.G.UU...........................C.CGG.C..U..UGUGCG.C.G....AA.G..................CG.C.U.G.AU.G
   NZ_OU594967.1     GCAUCAAU.........GG.U.UCG.GG..GA..U.C.G.C.U.GC...U...G.A..U..............................GCUG.CU.G..A.G.C..GC.GG..A....C.-....-..U.C..A.A...A..G.U..CGcaU..U.......................................AU...UU...GA..A...G....C......A...A...A...A...G...A...U...U.U.U.GC.AA...GU...........................................G...C.G..A..C...A...UCC..U..C..G..G...CG..AG...C....U...C...G...A...A..GUUAGUUCACGGCGGUCUGAGGUAUCUAGAGCAUUACGA.A.UU...........................C.CGG.U..U..GGUUCG.U.G....AA.G..................CG.C.U.C.GG.U
   NZ_OW485601.1     GCAUCAAC.........GG.C.ACC.GG..CA..U.C.G.C.CcGC...-...G.A..U..............................GCGG.CC.G..G.G.C..GU.GG..U....C.U....C..A.G..C.G...U..G.U..U-..-..-.......................................GC...UG...UG..C...G....A......A...C...A...G...A...AcgaU...C.U.C.GG.CU...--...........................................C...C.G..G..C...Ac.gUCC..U..C..U..G...CC..UC...C....A...C...C...A...A..GCUCAUUCAUGGCGGGCUGCGCUAUCUCGAAUAUUUCGA.A.UU...........................C.CGU.C..U..CGUUCG.C.G....A-.-aucauu...gcuggag..CG.C.G.A.--.-


   Structure         (((((............)).).))..............(.(.(.((...........................................)))).)..................................(.(..(.(......(.(.................................................))...))...))..(...(...................(...(...(...(.........(.(.((...................................................)...).)..)..........)))..)............)).........................................(((((........................................................).))).).....((((((.(.(..........................)).).).).)).)


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glpD



Position: 95-229, Conformation: #0







97% 90% 75% 50% Nucleotide present N N N Nucleotide identify E < 0.1 Base-pair covariation E < 0.05 Helix-level covariation 97% 90% 75%

G Y A U Y A A Y G G Y G Y G G Y A U Y G C G A Y G C G C G G C G G G Y U G U U R R R R R R G A Y Y U G C A C U C U C R Y Y C A A R C U R U Y C A Y G G Y G G Y U G C G Y U A Y C U G A R Y A Y Y Y G A R U U Y Y G C U R G U R G A R G C Y U R Y 5'