cmk-rpsA-ihfB



Position: 2348-2517, Conformation: #0







DMS reactivity > 1.0 0.0 0.4 0.7 G/U/No data
Position: 0 (position.label in template: 0.5')5' Position: 1 (position.label in template: 1.A) Reactivity: nanA Position: 2 (position.label in template: 2.G) Reactivity: nanG Position: 3 (position.label in template: 3.U) Reactivity: nanU Position: 4 (position.label in template: 4.U) Reactivity: nanU Position: 5 (position.label in template: 5.G) Reactivity: nanG Position: 6 (position.label in template: 6.A) Reactivity: nanA Position: 7 (position.label in template: 7.A) Reactivity: nanA Position: 8 (position.label in template: 8.G) Reactivity: nanG Position: 9 (position.label in template: 9.C) Reactivity: nanC Position: 10 (position.label in template: 10.U) Reactivity: nanU Position: 11 (position.label in template: 11.A) Reactivity: nanA Position: 12 (position.label in template: 12.A) Reactivity: nanA Position: 13 (position.label in template: 13.A) Reactivity: nanA Position: 14 (position.label in template: 14.U) Reactivity: nanU Position: 15 (position.label in template: 15.U) Reactivity: nanU Position: 16 (position.label in template: 16.C) Reactivity: nanC Position: 17 (position.label in template: 17.A) Reactivity: nanA Position: 18 (position.label in template: 18.C) Reactivity: nanC Position: 19 (position.label in template: 19.C) Reactivity: nanC Position: 20 (position.label in template: 20.G) Reactivity: nanG Position: 21 (position.label in template: 21.G) Reactivity: nanG Position: 22 (position.label in template: 22.C) Reactivity: nanC Position: 23 (position.label in template: 23.G) Reactivity: nanG Position: 24 (position.label in template: 24.U) Reactivity: nanU Position: 25 (position.label in template: 25.U) Reactivity: nanU Position: 26 (position.label in template: 26.G) Reactivity: nanG Position: 27 (position.label in template: 27.A) Reactivity: nanA Position: 28 (position.label in template: 28.U) Reactivity: nanU Position: 29 (position.label in template: 29.C) Reactivity: nanC Position: 30 (position.label in template: 30.G) Reactivity: nanG Position: 31 (position.label in template: 31.U) Reactivity: nanU Position: 32 (position.label in template: 32.A) Reactivity: nanA Position: 33 (position.label in template: 33.A) Reactivity: nanA Position: 34 (position.label in template: 34.A) Reactivity: nanA Position: 35 (position.label in template: 35.A) Reactivity: nanA Position: 36 (position.label in template: 36.A) Reactivity: nanA Position: 37 (position.label in template: 37.C) Reactivity: nanC Position: 38 (position.label in template: 38.C) Reactivity: 0C Position: 39 (position.label in template: 39.G) Reactivity: nanG Position: 40 (position.label in template: 40.C) Reactivity: 0C Position: 41 (position.label in template: 41.G) Reactivity: nanG Position: 42 (position.label in template: 42.C) Reactivity: 0C Position: 43 (position.label in template: 43.A) Reactivity: 0A Position: 44 (position.label in template: 44.A) Reactivity: 0.5A Position: 45 (position.label in template: 45.U) Reactivity: nanU Position: 46 (position.label in template: 46.C) Reactivity: 0C Position: 47 (position.label in template: 47.A) Reactivity: 0A Position: 48 (position.label in template: 48.G) Reactivity: nanG Position: 49 (position.label in template: 49.C) Reactivity: 0C Position: 50 (position.label in template: 50.C) Reactivity: 0C Position: 51 (position.label in template: 51.U) Reactivity: nanU Position: 52 (position.label in template: 52.G) Reactivity: nanG Position: 53 (position.label in template: 53.U) Reactivity: nanU Position: 54 (position.label in template: 54.C) Reactivity: 0C Position: 55 (position.label in template: 55.U) Reactivity: nanU Position: 56 (position.label in template: 56.G) Reactivity: nanG Position: 57 (position.label in template: 57.U) Reactivity: nanU Position: 58 (position.label in template: 58.U) Reactivity: nanU Position: 59 (position.label in template: 59.C) Reactivity: 0.5C Position: 60 (position.label in template: 60.G) Reactivity: nanG Position: 61 (position.label in template: 61.U) Reactivity: nanU Position: 62 (position.label in template: 62.G) Reactivity: nanG Position: 63 (position.label in template: 63.C) Reactivity: 0.5C Position: 64 (position.label in template: 64.G) Reactivity: nanG Position: 65 (position.label in template: 65.A) Reactivity: 0A Position: 66 (position.label in template: 66.A) Reactivity: 0.5A Position: 67 (position.label in template: 67.A) Reactivity: 0.5A Position: 68 (position.label in template: 68.G) Reactivity: nanG Position: 69 (position.label in template: 69.A) Reactivity: 0A Position: 70 (position.label in template: 70.C) Reactivity: 0C Position: 71 (position.label in template: 71.G) Reactivity: nanG Position: 72 (position.label in template: 72.A) Reactivity: 0.5A Position: 73 (position.label in template: 73.A) Reactivity: 1A Position: 74 (position.label in template: 74.G) Reactivity: nanG Position: 75 (position.label in template: 75.C) Reactivity: 0C Position: 76 (position.label in template: 76.U) Reactivity: nanU Position: 77 (position.label in template: 77.G) Reactivity: nanG Position: 78 (position.label in template: 78.A) Reactivity: 1A Position: 79 (position.label in template: 79.C) Reactivity: 1C Position: 80 (position.label in template: 80.G) Reactivity: nanG Position: 81 (position.label in template: 81.A) Reactivity: 0A Position: 82 (position.label in template: 82.G) Reactivity: nanG Position: 83 (position.label in template: 83.A) Reactivity: 0A Position: 84 (position.label in template: 84.A) Reactivity: 0A Position: 85 (position.label in template: 85.A) Reactivity: 0A Position: 86 (position.label in template: 86.G) Reactivity: nanG Position: 87 (position.label in template: 87.A) Reactivity: 1A Position: 88 (position.label in template: 88.U) Reactivity: nanU Position: 89 (position.label in template: 89.G) Reactivity: nanG Position: 90 (position.label in template: 90.C) Reactivity: 0C Position: 91 (position.label in template: 91.A) Reactivity: 0A Position: 92 (position.label in template: 92.A) Reactivity: 1A Position: 93 (position.label in template: 93.U) Reactivity: nanU Position: 94 (position.label in template: 94.C) Reactivity: 0C Position: 95 (position.label in template: 95.G) Reactivity: nanG Position: 96 (position.label in template: 96.C) Reactivity: 0.5C Position: 97 (position.label in template: 97.A) Reactivity: 1A Position: 98 (position.label in template: 98.A) Reactivity: 0.5A Position: 99 (position.label in template: 99.C) Reactivity: 0C Position: 100 (position.label in template: 100.U) Reactivity: nanU Position: 101 (position.label in template: 101.G) Reactivity: nanG Position: 102 (position.label in template: 102.U) Reactivity: nanU Position: 103 (position.label in template: 103.U) Reactivity: nanU Position: 104 (position.label in template: 104.A) Reactivity: 1A Position: 105 (position.label in template: 105.A) Reactivity: 1A Position: 106 (position.label in template: 106.C) Reactivity: 1C Position: 107 (position.label in template: 107.A) Reactivity: 1A Position: 108 (position.label in template: 108.A) Reactivity: 0.5A Position: 109 (position.label in template: 109.A) Reactivity: 0A Position: 110 (position.label in template: 110.C) Reactivity: 0C Position: 111 (position.label in template: 111.A) Reactivity: 0A Position: 112 (position.label in template: 112.G) Reactivity: nanG Position: 113 (position.label in template: 113.G) Reactivity: nanG Position: 114 (position.label in template: 114.A) Reactivity: 0.5A Position: 115 (position.label in template: 115.A) Reactivity: 1A Position: 116 (position.label in template: 116.G) Reactivity: nanG Position: 117 (position.label in template: 117.A) Reactivity: 0A Position: 118 (position.label in template: 118.U) Reactivity: nanU Position: 119 (position.label in template: 119.G) Reactivity: nanG Position: 120 (position.label in template: 120.C) Reactivity: 0C Position: 121 (position.label in template: 121.A) Reactivity: 0A Position: 122 (position.label in template: 122.A) Reactivity: 0.5A Position: 123 (position.label in template: 123.A) Reactivity: 1A Position: 124 (position.label in template: 124.C) Reactivity: 0C Position: 125 (position.label in template: 125.U) Reactivity: nanU Position: 126 (position.label in template: 126.U) Reactivity: nanU Position: 127 (position.label in template: 127.C) Reactivity: 0C Position: 128 (position.label in template: 128.U) Reactivity: nanU Position: 129 (position.label in template: 129.C) Reactivity: 0C Position: 130 (position.label in template: 130.C) Reactivity: 0.5C Position: 131 (position.label in template: 131.A) Reactivity: 0.5A Position: 132 (position.label in template: 132.A) Reactivity: 1A Position: 133 (position.label in template: 133.C) Reactivity: 0C Position: 134 (position.label in template: 134.A) Reactivity: 0A Position: 135 (position.label in template: 135.A) Reactivity: 0.5A Position: 136 (position.label in template: 136.C) Reactivity: 0.5C Position: 137 (position.label in template: 137.G) Reactivity: nanG Position: 138 (position.label in template: 138.C) Reactivity: 0C Position: 139 (position.label in template: 139.A) Reactivity: 0.5A Position: 140 (position.label in template: 140.A) Reactivity: 1A Position: 141 (position.label in template: 141.U) Reactivity: nanU Position: 142 (position.label in template: 142.G) Reactivity: nanG Position: 143 (position.label in template: 143.G) Reactivity: nanG Position: 144 (position.label in template: 144.C) Reactivity: 0.5C Position: 145 (position.label in template: 145.U) Reactivity: nanU Position: 146 (position.label in template: 146.G) Reactivity: nanG Position: 147 (position.label in template: 147.A) Reactivity: 1A Position: 148 (position.label in template: 148.A) Reactivity: 0.5A Position: 149 (position.label in template: 149.G) Reactivity: nanG Position: 150 (position.label in template: 150.C) Reactivity: 0C Position: 151 (position.label in template: 151.U) Reactivity: nanU Position: 152 (position.label in template: 152.U) Reactivity: nanU Position: 153 (position.label in template: 153.U) Reactivity: nanU Position: 154 (position.label in template: 154.C) Reactivity: 0.5C Position: 155 (position.label in template: 155.A) Reactivity: 0.5A Position: 156 (position.label in template: 156.A) Reactivity: 1A Position: 157 (position.label in template: 157.A) Reactivity: 1A Position: 158 (position.label in template: 158.G) Reactivity: nanG Position: 159 (position.label in template: 159.C) Reactivity: 0C Position: 160 (position.label in template: 160.A) Reactivity: 0.5A Position: 161 (position.label in template: 161.G) Reactivity: nanG Position: 162 (position.label in template: 162.C) Reactivity: 0.5C Position: 163 (position.label in template: 163.U) Reactivity: nanU Position: 164 (position.label in template: 164.A) Reactivity: 0.5A Position: 165 (position.label in template: 165.A) Reactivity: 0.5A Position: 166 (position.label in template: 166.A) Reactivity: 0.5A Position: 167 (position.label in template: 167.G) Reactivity: nanG Position: 168 (position.label in template: 168.G) Reactivity: nanG Position: 169 (position.label in template: 169.C) Reactivity: 0C Position: 170 (position.label in template: 170.G) Reactivity: nanG Position: 171 (position.label in template: 171.A) Reactivity: 0A Position: 172 (position.label in template: 172.G) Reactivity: nanG Position: 173 (position.label in template: 173.U) Reactivity: nanU Position: 174 (position.label in template: 174.A) Reactivity: nanA Position: 175 (position.label in template: 175.A) Reactivity: nanA Position: 176 (position.label in template: 176.U) Reactivity: nanU Position: 177 (position.label in template: 177.U) Reactivity: nanU Position: 178 (position.label in template: 178.C) Reactivity: nanC Position: 179 (position.label in template: 179.U) Reactivity: nanU Position: 180 (position.label in template: 180.C) Reactivity: nanC Position: 181 (position.label in template: 181.U) Reactivity: nanU Position: 182 (position.label in template: 182.G) Reactivity: nanG Position: 183 (position.label in template: 183.A) Reactivity: nanA Position: 184 (position.label in template: 184.C) Reactivity: nanC Position: 185 (position.label in template: 185.U) Reactivity: nanU Position: 186 (position.label in template: 186.C) Reactivity: nanC Position: 187 (position.label in template: 187.U) Reactivity: nanU Position: 188 (position.label in template: 188.U) Reactivity: nanU Position: 189 (position.label in template: 189.C) Reactivity: nanC Position: 190 (position.label in template: 190.G) Reactivity: nanG Position: 191 (position.label in template: 191.G) Reactivity: nanG Position: 192 (position.label in template: 192.G) Reactivity: nanG Position: 193 (position.label in template: 193.A) Reactivity: nanA Position: 194 (position.label in template: 194.U) Reactivity: nanU Position: 195 (position.label in template: 195.U) Reactivity: nanU Position: 196 (position.label in template: 196.U) Reactivity: nanU Position: 197 (position.label in template: 197.U) Reactivity: nanU Position: 198 (position.label in template: 198.U) Reactivity: nanU Position: 199 (position.label in template: 199.A) Reactivity: nanA Position: 200 (position.label in template: 200.U) Reactivity: nanU Position: 201 (position.label in template: 201.U) Reactivity: nanU Position: 202 (position.label in template: 202.C) Reactivity: nanC Position: 203 (position.label in template: 203.C) Reactivity: nanC Position: 204 (position.label in template: 204.G) Reactivity: nanG Position: 205 (position.label in template: 205.A) Reactivity: nanA Position: 206 (position.label in template: 206.A) Reactivity: nanA Position: 207 (position.label in template: 207.G) Reactivity: nanG Position: 208 (position.label in template: 208.U) Reactivity: nanU Position: 209 (position.label in template: 209.U) Reactivity: nanU Position: 210 (position.label in template: 210.U) Reactivity: nanU Position: 211 (position.label in template: 211.3')3' 10 20 30 50 100 150 200


cmk-rpsA-ihfB



Position: 2348-2517, Conformation: #0







Retained alignments:


   NC_002977.6       GAAGCCAAAUUCAUCGGUGUCGAC.A.AG....AAA...ACCAAGU.CG.AU..CUCCCUGUCGAUCAAGUCCAA.................................................................................................GGAU.C.AGGAUG...A..GGAAGCGGCGGCGAUCAag..............gac-............................................................................................-.....ua............cuCGCa..gcAGGUG.U.C....-.-.-..CGG..C.A...C.....CC...CGA..cCCUC.....GGCGAC.AU..C..U.UC..AA.G...G...A...A.CA................................................................................................GAU.GGAAAAccgcugaucg.................................................uuuccgguuuuCCC.C..G..G...AGGAG.G..G.GGUC..GU.AA.................................................................GGC.C.CCU.UC
   NC_003910.7       GAAGCUAGAUUUAUGGGUGUGGAU.C.GU....AAG...AACCGUA.CU.AU..UAGUCUAUCUAUCAAAGCAAA.................................................................................................AGAU.C.AAGCUG...A..UGAACGUGAAGCAAUGGauaac........cuaaac-............................................................................................-.....caag........uagaAGA....aACUGG.U.U....U.A.A..--G..U.G...C.....UA...UGG...CUGC.....UGCGUU.UA..A..A.AA..CG.C...U...A...A.AA...........acuaauauuccuuaaccggau..........................................auaguuuuacuuugcaauggug---.------cuguaau.......................................................uacuacag-CA.G..G..U...GAAAA.G..A.GUAU..UU.AU.................................................cacuau...cguggugAUA.C.UCU.UU
   NC_003911.12      GAUGUGCGCGUCACCAACGUGGAC.A.GC....AAG...ACCCGCC.GU.CU..GGGCCUGUCGAUCAAGGCACG.................................................................................................CGAG.A.UCGCCG...A..AGAGAAAGAGGCCGUGGa................ac-aguacggcucguccgac..........................................................ucgggugcaucgcuggg-.....................---.....-----.-.-....-.-.-..CGA..U.A...U.....CC...UGG...GCGC.....GGCUCU.GA..A..G.GG..--.-...-...-...-.--...........cgacaacuaagu.............................................................ccugaccgacguCUG.AGUAAA......................................................................---.A..A..G...AAGGC.C..C.CGCA..GG.AG.................................................cga..........uccUGC.G.GGG.CC
   NC_004347.2       GAAGCUAAGUUCAUGGGUGUUGAC.C.GU....AAG...AACCGUU.CU.AU..CAGCCUGUCAAUCAAAGCGAA.................................................................................................AGAC.G.AAGCUG...A..AGAAAAAGAAGUGAUGGcgaccuu.....gaauaaa-............................................................................................-.....caag........aagaCGC.....UGUUA.U.U....-.A.G..UAA..U.G...C.....AA...UGG...CUGA.....AGCGUU.UA..A..A.GC..AG.C...U...C...-.--................................................................................................GCA.AAUAAUcg..................................................................ccUGU.U..G..-...-UAUG.G..G.GAGU..UU.U-.................................................................CCU.C.CCC.AU
   NC_004556.1       GAAGCUAAGUUUAUUGGUAUGGAU.C.GU....AAG...GGCCGUA.CU.UU.aCAGC-UGUCGAUUAAAGCCAA.................................................................................................AGAU.G.AUGCUG...A..GAUGCGCGAAGUUCUUGagg............aaua-............................................................................................-.....ucaa.......ucuuc---....uUCCGG.C.G....G.U.A..CUA..C.A...A.....AA...UUG...GGUA.....CGCUGC.UG..A..G.AG..AG.C...A...A...-.--................................................................................................CUC.GGUAAUaa..................................................................gcCCG.A..G..U...AAUUG.A..A.UGGG..UG.UU.................................................................CCU.G.A--.--
   NC_004578.1       GAAGCCAAGAUCAUCAGCGUUGAC.C.GC....AAG...AGCCGCG.UA.AU..CAGCUUGUCCAUCAAGUCGAA.................................................................................................AGAC.G.UUGAAG...A..CGAGAAAGAAGCGAUCCag...............ag-ccugcguagc........................................................................aagccugaag-.....ucgc........ugaaAGC.....ACUGG.U.C....C.U.A..CCA..C.-...-.....UA...UUG...GUGA.....-CCUGC.UG..C..G.--..CG.C...G...C...A.AA................................................................................................--U.GGAAAAacagaacuaa.................................................guucugcuugaCCA.U..A..A...AAAAG.G..G.CGAC..UU.CG.................................................................GUC.G.CCC.UU
   NC_004603.1       GAAGCUAAGUUCACAGGUGUAGAC.C.GU....AAG...AACCGCG.UA.AU..CAACCUAUCUAUCAAAGCUAA.................................................................................................AGAC.G.AAGCUG...A..AGAGCAAGAAGCAAUGGcaucuau.....caacaag-............................................................................................-.....caag........acgaAGC.....--UGC.UuU....U.G.G..UAA..U.G...C.....AA...UGG...CUGA.....CGCUUU.CA..A..A.GC..UG.C...U...A...A.AG................................................................................................GCG.AAUAAUauac.............................................................ucgcuUAA.G..C..U...AAAAA.G..G.AGCC..GC.AA.................................................................GGC.U.CCU.UU
   NC_005126.1       GAAGCUAAAUAUACUGGAGUUGAU.C.GC....AAA...AACCGCG.UU.AU..CAACUUGUCUGUUCGCGCUAA.................................................................................................AGAC.G.AAGCUG...A..CGAAAAAGACGCUAUCGcuucugu....gaacaaac-............................................................................................-.....aag.........aagaCGCa...aACUUU.G.C....A.A.A..CAA..U.G...C.....GA...UGG...CUGA.....AGCUUU.CA..A..A.GC..AG.C...G...A...A.AG................................................................................................GCG.AAUAAUucaa..............................................................gugaAUA.A..C..G...GUGGA.U..A.ACAC..GU.AA.................................................................GUG.U.UAU.CC
   NC_005966.1       GAAGCGAAAAUCAUCAACGUUGAU.C.GU....AAA...UCUCGUU.CU.AU..CAACUUGUCUAUCAAAGCGAA.................................................................................................AGAC.G.AAGCUG...A..AGAAAAAGAAGCAGUUGcuaaucuu..cguacaaca-u.........................................................................................cu-.....guau........cucaAGA....cAAUGG.U.C....C.U.A..AGA..C.G...-.....AU...UGG...-UGA.....C---UU.GA..U..U.AA..AG.C...U...C...A.AA................................................................................................UGA.AAUAAGu...................................................................gc--U.G..U..U...AAAAA.A..G.UAUU..UU.UA.................................................guguaa....cuaauuGGU.A.CUU.UU
   NC_006300.1       GAAGCAAAAUACACUGGUGUUGAU.C.GU....AAA...GCUCGCA.UC.GU..UCAUUUAUCCGUACGUGCGAA.................................................................................................AGAU.C.AAGCUG...A..AGAAGCUGCUGCAGUUGcaagcgug..aauaacaaa-............................................................................................-.....caaga.....agacguUGC....u---AU.U.C....C.-.-..AAA..C.G...C.....AA...UGG...CUGA.....AGCAUU.CA..A..A.GC..UG.C...U...A...A.AG................................................................................................GCG.AAUAAUuacuuauuua..................................................ccaaguaaagUAA.A..U..U...AACCG.G..C.GUGC..AU.UA.................................................................GUG.C.GCC.GG
   NC_006512.1       GAAGCUCGCUUCAUGGGCGUUGAC.C.GU....AAA...AACCGUA.CU.CU..GAGCUUGUCUAUCCGUGCGAA.................................................................................................AGAC.G.AAGUUG...A..AGAGAAAGAAGCGGUUGaaag...........cguu-aauaa.................................................................................gcaaca-.....ggac.......aguggU--u...cUGGUC.U.U....-.A.A..CAG..C.G...C.....AA...UGG...CAGA.....AGCCUU.UA..A..A.GC..UG.C...A...A...A.AA................................................................................................CUG.A-----c...................................................................ga-CG.A..A..U...AAUUU.A..C.UGCA..CU.GU.................................................................UGC.A.GUU.AA
   NC_007204.1       GAAGCUAAAAUCAUCAGUGUUGAU.C.GU....AAA...ACACGUA.AC.AU..CAGCUUGUCAAUCAAAGCGAA.................................................................................................AGAC.G.AAGCUG...A..AGAGCGUCAAGCGAUUA...................Aagagcuaagcagcacaaccacgacuacuac................................ugcugccgguucugaugcacaaccaaaaac-.....uau..........uggUGA.....CUUGA.U.C....A.A.A..GAA..C.A...-.....AA...UGC...AGUA.....AGCUAU.UU..A..C.--..CG.C...U...A...A.UG................................................................................................--U.UAUGAU.....................................................................cUUA.U..A..A...AAGAA.A..G.CGAC..UC.CG.................................................................GUC.G.CUU.UU
   NC_007481.1       GAAGUUAAAUAUGUUGGUGUUGAU.C.GC....AAG...AACCGCA.CU.UU..AAGCUUAUCUGUUAAAGCUCU.................................................................................................UUUC.G.AAGCUG...A..AGAGAAAGAAGUAAUAGaaaag.........cuuaa-............................................................................................-.....gaaa........gacgAGC....cAG-UG.U.U....U.G.A..AAA..C.G...C.....AA...UGG...CUGC.....UGCUUU.CG..C..A.AA..UG.C...A...C...A.AA................................................................................................AAG.ACUAAUuaau..............................................................caguCUU.U..A..A...UUGGA.A..G.GGCA.gUU.UA.................................................................UGC.C.CUU.CC
   NC_007484.1       GAGGCCAAGUUCACUGGCAUCGAU.C.GU....AAG...AAUCGUG.UA.AU..UACCCUCUCCGUUCGUGCUAA.................................................................................................AGAU.G.UAGAAG...A..AGAGGCGGAAGCUAUUAagga...........guac-ucc.....................................................................................ggaa-.....cgggu......gcggaAGC.....-UGCU.U.C....-.G.A..CUA..-.-...C.....AC...UGG...GCGA....uAUCCUC.AA..G..G.--..AG.C...A...A...A.UG...........gaaaggcaagaggaaga...................................................aggcuaaaaacaauagu---.------uuuuuc.........................................................uacugag-GC.U..C..A...A---U.G..G.GGGC..GU.-G.................................................................GCC.C.CCG.AG
   NC_007510.1       AACGCGAUGGUGAUCAACAUCGAU.C.GC....AAG...UCGCGCG.GC.AU..CAACCUGUCGAUCAAGGCGAA.................................................................................................GGAU.U.CGGCUG...A..ACAACAGGAAGCGAUCCgcggcc.......ugcagu-............................................................................................-.....cgga........cuccAGC.....GCUGC.U.G....C.G.A..C--..C.G...G.....UA...CGA...CCAA....cCUCGGC.G-..-..C.GC..UG.C...U...G...A.AG................................................................................................GCG.---AA-gcucga..........................................................cggcca---.G..A..A...CCAGU.A..A.GCCU..CA.CG.................................................................AGG.U.CUG.CU
   NC_007712.1       GAAGCGAAAUUCACCGGCGUUGAU.C.GC....AAA...AACCGCG.UU.GU..CAGCCUGUCCGUUCGUGCCAA.................................................................................................GGAC.G.AGGCGG...A..CGAGAAAGAAGCCAUCAgcaccgu....gaacaaca-a.........................................................................................gc-.....agga........agaaGGC....aACUUC.U.C....-.-.-..CAA..C.A...C.....AA...UGG...CUGA.....AGCCUU.UA..A..A.GC..GG.C...AaccA...A.AG................................................................................................GCG.AGUAAU.....................................................................aAUA.A..C..G...GGGGA.G..C.GGAG..GU.GA.................................................................UUC.U.GCU.CC
   NC_007908.1       ACGGCUGUUGUGGUCAAUGUGGAU.C.GC....AAG...ACCCGCA.AC.AU..CCAGCUGUCCAUCAAGGCCAA.................................................................................................GGAU.G.CGGCUG...A..UCAAAACGAAGCCAUGGccacu........uugagc-caguccucugccc.................................................................gcgaaaacgcuggc-.....acgacc....agucugGGU.....GC-UU.U.G....-.-.-..CUG..C.-...-.....--...-GC...GCCA.....AGCUG-.GA..C..A.AC..AC.C...G...A...A.AA................................................................................................GUA.AG----a...................................................................agCGA.A..C..U...GUCAU.G..C.CGGA..UU.UG................................................................aUCC.G.GCA.UG
   NC_007912.1       GAAGCUAAAAUCACCAAUGUAGAC.C.GC....AAA...AACCGUG.CA.AU..UAUCUUAAGUGUUAAAGCUAA.................................................................................................AGAU.G.UUGCAG...A..CGAAAAAGCGGCUAUCA...................A............................................................................................A....................gAGC.....AC---.-.-....-.A.G..CAC..C.A...A.....AG...CGG...CAGA.....AGCUGC.AC..A..G.CC..AG.C...U...A...C.C-...........auuggcgaccuaaucaaggccgaaau.................................ggaaaacaaaaacagcuaguuuuuag---.------uuguuu.........................................................aguuucaAAG.C..U..A...AAAAG.G..C.GACC..AA.UU.................................................................GGU.C.GCC.UU
   NC_007954.1       GAAGCUAGAUUCAUGGGUGUUGAU.C.GC....AAG...AACCGUU.CU.AU..CAGCCUAUCUAUCAAAGCGAA.................................................................................................AGAU.G.AAGCUG...A..ACAGAAAGAAGCGAUUGcuacucu....gaacaagc-............................................................................................-.....aag.........augaCGU.....UGUGA.U.-....C.A.G..CAA..U.G...C.....AA...UGG...CUGA.....AGCAUU.UA..A..A.GC..AG.C...U...C...-.--................................................................................................GCA.AGUAAUcgaa.............................................................aucgcCUG.U..U..G...UA--A.A..G.GGAG..UU.CG.................................................................CUC.C.CUU.A-
   NC_007963.1       GAAGCCAAGAUCGUCGGCGUCGAU.C.GC....AAG...AACCGUG.CG.AU..CAACCUCUCGGUCAAGGCGAA.................................................................................................GGAU.C.AGACGG...A..UACCCGUCGUGCCAUGG..................g-caaacugcgcgaccaggaagcugagccgcaguccgguccgaccaccaucggugaucugaucaagcagcagaugggcggcgaauaagcccgca-.....c.............auCGC....cGUCGC.G.U....C.C.C..GCA..C.G...C.....GA...CGG...CCUU.....GGCUCG.CU..A..A.--..-G.C...C...A...A.AC................................................................................................---.------......................................................................---.G..A..A...AACCG.U..G.CCUC..GC.GA.................................................................GAG.G.CAC.GG
   NC_007964.1       GAUGCCCGCGUCAUCCAGUUCGAC.A.GG....AAG...GCCCGCA.AG.GU..GCAGGUCUCGAUCAAGGCGCU.................................................................................................UGAG.G.UCGCCG...A..AGAGAAGGAAGCCAUUGcgcaauau...ggcuccuc-cgauu..................................................................................cuggc-.....gcga.......cgcugGGCg...aCAUCC.U.C....-.-.-..GGC..A.C...C.....--...GCG...CUGA.....AACAGC.GC..A..C.CG..--.-...-...-...-.--...........acaagua......................................................................agcgucag---.------cuucuuu.......................................................auugcagcCGA.C..C..A...AAGGC.U..C.CGGU..UU.CG.................................................................ACC.G.GAG.CC
   NC_008027.1       GAAGCCAAGAUCAUCAGCGUCGAC.C.GC....AAG...UCCCGCG.UU.AU..CAGCCUGUCCAUCAAGUCGAA.................................................................................................GGAC.G.ACGCUG...A..AGAGCGCGAAGCCAUCC...................A............................................................................................G.....................AGC.....CU---.-.-....G.A.A..AAA..C.G...C.....UC...CGG...AAGC.....GGCUGC.CG..A..U.AC..CA.C...C...A...-.--...........uggcugcgcugcugcgcgaagc.........................................aauggccaagcagaacugaguu---.------cugu.............................................................uugauCGG.U..A..A...AAAGG.G..C.GACC..CU.CG.................................................................GGU.C.GCC.CU
   NC_008260.1       GAAGCCAAGAUCACCAACGUUGAC.C.GU....AAG...AACCGUG.UU.CU..CAGCUUGUCCAUUAAGUCCAA.................................................................................................GGAC.C.AAGCUG...A..UGAGCGUGAAGCCAUCGaaggc........caucag-g..........................................................................................a-.....gcag.......caagaCGC....cAACGC.U.C....C.G.A..AGA..C.C...-.....AU...UGG...-UGA.....CUUGAU.C-..A..A.GA..AG.C...A...A...A.UG...........gaaagc.........................................................................agcaac--G.AGUCAUaaa...............................................................cggcUCC.U..C..C...CAGGG.G..C.CGGC..AU.CG................................................................cGCC.G.GCC.CC
   NC_008344.1       GAGGCCGCGAUUAUUAAUAUUGAU.C.GU....AAG...AGCCGAA.GU.AU..CAGUUUGUCAGUUAAAGCCA-.................................................................................................GGAU.CcAGGAGG...A..AGAAGAUAAAGCGAUCAg.................a-ucgcuggcuccaucuccagcc..................................................agugcggguacuacuaaucug-.....g..............gUGC.....AUUAC.U.U....A.A.AgcCAA..G.A...U.....UG...AUA...GUAA.....AUCUUC.-A..G..A.AG..AA.U...A...A...A.AG................................................................................................CUG.GC----c...................................................................auGAC.G..A..A...AUCCG.A..A.C---..-UgAU.................................................................UUC.-.---.--
   NC_008345.1       GAAGCUAAGUUCAUGGGUGUAGAU.C.GU....AAG...AACCGUU.CU.AU..CAGCUUAUCUAUCAAAGCGAA.................................................................................................AGAU.G.AAGCUG...A..ACAGAAAGAAGCGAUCGcuacuuu....gaacaagc-............................................................................................-.....aag.........acgaUGU.....UGUAA.U.G....-.A.G..CAG..C.G...C.....AA...UGG...CUGA.....AGCCUU.CA..A..A.GC..AG.C...U...C...-.--................................................................................................GUA.AGUAAUcgaaa............................................................aucguCU-.-..G..U...UGUAU.G..G.GGAC..CU.U-.................................................................GUC.C.CCA.UU
   NC_008576.1       GAGUGUCGUGUGAUGCAGGUUGAC.C.GU....CAG...AAGCGCA.AA.AU..CUCCCUCUCCAUCAAAGCGAU.................................................................................................GGAA.G.UGCAGC...A..AGAGCGCGAUGCCAUUA..................a-agaguaugccagugauagc......................................................agcagugccgccaccagca-.....gc...........uugGGUg...aGGCGC.U.C....A.-.-..--G..C.C...-.....AA...GCG...CUGG....aAAAGGC.CA..A..U.GC..CG.C...Ug.aA...U.AA................................................................................................GCU.AU----gcuccugc......................................................auaucugaAUA.A..A..A...AAAGG.C..C.CAUC..CU.AA.................................................c..............cGAU.G.GGC.CU
   NC_008700.1       GAAGCCAAGUUCAUGGGCGUAGAU.C.GC....AAG...AACCGCA.AC.GU..GAGCCUGUCUAUCCGUGCGAA.................................................................................................AGAC.G.AAGCUG...A..CGAAAAAGAAGUUAUGGcaaacu......ugaacaa-............................................................................................-.....gca.........agaaGAC....gCUGUU.A.U....U.A.G..UAA..U.G...C.....UA...UGG...CCGA.....AGCGUU.CA..A..G.GC..CG.C...U...C...-.--................................................................................................GUA.AGUAAU......................................................................UGC.C..A..A...AUAUG.A..G.GGAG..UU.GG.................................................guuu........cccgCUC.C.CUC.AU
   NC_008709.1       GAUGCUAAAUUUGUCGGUGUAGAU.C.GU....AAA...AACCGUG.UA.AU..UAGCCUUUCUAUCAAAGCUAA.................................................................................................AGAU.G.AAGCUG...A..UGAGAAAGAAGCUGUUGauag..........cuuaa-aac......................................................................................aac-.....aag.........augaAGC....a-A-GC.A.U....G.G.G..UAA..U.G...C.....AA...UGC...UUGA.....UGCAUU.UA..A..C.GC..AG.C...U...A...A.AG................................................................................................GCA.AAUAAU......................................................................---.-..U..A...UUGAG.U..G.GCUG..GUaAU.................................................................CAG.C.CAC.UC
   NC_008786.1       ACGGCCGUGGUGGUCAACAUCGAC.C.GC....AAG...ACGCGCA.AC.AU..CCAGUUGUCGAUCAAGCAAAA.................................................................................................GGAC.A.UGGUGG...A..CCAGCAAGAGGCAAUGC...................Agaaccugucgcaacaaucgagccgcgaa...................................agcgccggcacgaccagucugggcgccuu-.....gcu..........gcgUGC.....CAAGC.U.G....-.G.A..CAA..C.-...-.....--...--A...ACCA.....GGACAA.GU..A..A.GC..CG.C...C...A...G.--................................................................................................---.------g....................................................................cGCG.C..A..U...CCGGC.G..G.GCGC..CU.CG................................................................uGCG.C.CCG.CG
   NC_008789.1       GAGGCCAAGUUCGUCGGCGUCGAU.C.GU....CGC...AACCGGA.CC.GU..CAACCUCUCCCUGCGUGCCCA.................................................................................................GGAG.G.CCGAGG...A..GGAGCAGGUGGCCGUGC..................a-ggagcacgcccguccggg........................................................gccaagugccggcaccac-.....gca.........gcucGGCg...aUCUGC.U.C....A.A.G..--G..A.G...C....aGA...UGA...-AG-.....GGCAAU.CA..G..G.AC..AA.C...U...G...A.--................................................................................................GUC.C-----......................................................................-GG.U..G..A...CACCG.G..G.GGGC..CU.CG................................................................gGCC.C.CCC.GG
   NC_008825.1       ACGGCGCUGAUCAUCAACGUCGAC.C.GC....AAG...ACGCGUU.CG.AU..CCAGCUGUCGAUCAAGGCCAA.................................................................................................GGAC.A.ACGUCG...A..UAACCAGGAAGCCAUGCa................gc-............................................................................................-.....gc............cuGGCc...cAGACG.U.C....C.G.A..--A..C.G...U.....--...-GA...-AAA.....CGCCGG.CA..C.cA.CG..AG.C...C...U...-.--................................................................................................CGG.CG----cccugcugaaggccaagcugg............................accagaacaacuccugaguccCGC.C..G..A...GGCUG.G..A.GACC..UU.AU.................................................a..............gGGU.U.UCC.AG
   NC_009092.1       GAAUCUAAGUUCAUGGGUGUUGAU.C.GC....AAG...AACCGUU.CU.AU..CAGCCUGUCUAUCCGCGCGAA.................................................................................................AGAC.G.AAGCUG...A..UGAGAAGGAAGCGAUGGcuaacuu....gaacaagc-............................................................................................-.....aagau......gacguUGC.....UA---.-.U....G.A.G..CAA..U.G...C.....CA...UGG...CUGA.....AGCGUU.CA..A..A.GC..GG.C...U...C...-.--................................................................................................GCA.AAUAAUu...................................................................cgCCU.G..A..A...GUUCG.G..G.GAUG..GU.AA.................................................................CAU.C.CCC.GC
   NC_009379.1       ACUGCCAUGAUCAUUAAUAUUGAU.C.GU....AAG...UCACGCG.UA.AU..CAAUCUCUCAAUCAAAGCAAA.................................................................................................AGAC.A.GCUCUG...A..UCAACAAGAUGCAAUGAgcaa...........gcuc-caaggugaugcgca................................................................gucuggcacaacca-.....auu.........ugggUGC.....UUUGU.U.G....A.A.A..G--..-.-...-.....CA...AAA...UUGG.....-ACAAU.CA..A..G.G-..--.C...-...-...-.--................................................................................................---.--UAA-......................................................................--A.U..C..A...AUAUC.G..C.CGCU..CU.CC.................................................auga........ggagGGU.G.GCG.AU
   NC_009446.1       GAAGCAAAAGUGUUAAAUAUUGAC.C.GU....AAA...CAUAAAU.CU.AU..UGCUCUUUCUAUCCGCGCGAA.................................................................................................AGAU.G.UGGCUG...A..AGAAAAAGCAGUUAUUCa.................a-gacuauacccgcaaaga.........................................................uaaucaggcgagcacuuc-.....ac...........ucg-GUg...aUAUUU.U.C....A.A.A..GAA..U.U...-.....--...---...-AAA.....UUCUGA.CG..A..A.G-..--.-...-...-...-.--................................................................................................CCU.AAUUAUuucugc..........................................................ggaaauCUA.A..C..A...AAAGA.A..G.CUCC..AA.UU.................................................................GGA.G.CUU.CU
   NC_009792.1       GAAGCUAAAUUCACCGGCGUUGAU.C.GU....AAA...AACCGCG.CA.AU..CAGCCUGUCUGUUCGUGCGAA.................................................................................................AGAC.G.AAGCUG...A..CGAGAAAGAUGCAAUCGcaacugu.....uaacaaa-............................................................................................-.....cagg........aagaUGCa...aACUUC.U.C....C.A.A..CAA..C.G...C.....AA...UGG...CUGA.....AGCUUU.CA..A..A.GC..AG.C...U...A...A.AG................................................................................................GCG.AGUAAU.....................................................................uCUC.U..G..A...AACUU.C..G.GGUG..UU.UU.................................................................AUC.C.CGA.AG
   NC_009831.1       GAAUCUAAGUUCAUGGGUGUUGAC.C.GU....AAG...AACCGUA.CU.AU..CAGCCUAUCUAUCCGUGCGAA.................................................................................................AGAU.G.AAGCUG...A..AGAGAAAGAAGCAAUGGcuagcuu....gaacaagc-............................................................................................-.....aag.........aagaCGC.....UGUGA.U.-....G.A.G..CAG..U.G...C.....UA...UGG...CUGA.....AGCGUU.CA..A..A.GC..AG.C...U...C...-.--................................................................................................GCA.AGUAAUc...................................................................gcCUG.A..A..G...UUCUG.G..G.GUGC..UU.--.................................................................GCA.C.CCC.UG
   NC_009901.1       GAAUCUAAGUUCAUGGGUGUGGAU.C.GU....AAG...AACCGCA.CU.AU..CAGCCUAUCUAUCCGUGCGAA.................................................................................................AGAU.G.AAGCUG...A..AGAGAAAGAAGCAAUGGcuagcuu....gaacagcc-............................................................................................-.....agg.........aagaCGC.....UGUGA.U.-....G.A.G..CAG..U.G...C.....AA...UGG...CUGA.....AGCGUU.UA..A..A.GC..AG.C...U...C...-.--................................................................................................GUA.AAUAAUc...................................................................gcCUU.G..A..A...GUUCA.G..G.GGUG..CU.UG.................................................................CAC.C.CCU.AA
   NC_009952.1       GAUGUGCGCGUGACCAACGUGGAC.A.AC....AAG...ACCCGUC.GU.CU..CGGCCUGUCGAUCAAGGCCCG.................................................................................................CGAG.A.UCGCCG...A..AGAGAAGGAAGCCGUGGaa...............ca-............................................................................................-.....gu............acGGC.....--UCC.U.C....C.G.A..CAG..C.G...G.....--...CGC...GUCC.....CUCGGC.GA..C..A.UC..--.-...-...-...-.--...........cucggcgcggcg............................................................cucaagaaagacu---.------gagccagc.....................................................ucacacgaaCAC.G..G..A...AAAGC.C..C.CGCC..AU.CG.................................................................CGC.G.GGG.CU
   NC_010002.1       ACCGCCGUGGUGGUCAAUGUGGAU.C.GC....AAG...ACCCGCA.AC.AU..CCAGCUGUCGAUCAAGGCCAA.................................................................................................GGAC.C.AGGUCG...A..CCAGCAAGAAGCCAUGGcuuccc.......uguccg-cucagucggccaagga...........................................................aaacgccggcacgacca-.....gc...........cugGGCg...cCCUGC.U.G....C.G.-..CGC..C.A...A.....GC...UGG...ACAA.....CUCCGA.CA..A..G.UA..--.-...-...-...-.--...........aucagca.......................................................................gccaguc---.------ugcugacc.....................................................gcugaagguCGG.A..U..G...CGACG.G..G.CGCC..UC.CG.................................................................GGC.G.CCC.GU
   NC_010334.1       GAAUCUAAGUUCAUGGGUGUGGAU.C.GU....AAG...AACCGCA.CU.AU..CAGCCUAUCUAUCCGUGCGAA.................................................................................................AGAU.G.AAGCUG...A..AGAGAAAGAAGCAAUGGcuagcuu....gaacaguc-............................................................................................-.....agg.........aagaCGC.....UGUGA.U.-....G.A.G..CAG..U.G...C.....UA...UGG...CUGA.....AGCGUU.CA..A..A.GC..AG.C...U...C...-.--................................................................................................GUA.AAUAAUc...................................................................gcCUU.G..A..C...GUUCA.G..G.GGUG..CU.UG.................................................................CAC.C.CCU.AA
   NC_010506.1       GAAUCUAAGUUCAUGGGUGUUGAC.C.GU....AAG...AACCGUA.CA.AU..UAGCCUGUCUAUCAAAGCGAA.................................................................................................AGAC.G.AAGCUG...A..UGAAAAAGAAGCUAUGGcuagcuu.....gaacaag-............................................................................................-.....ca...........agaAGAu...gACGUA.A.U....G.A.G..CUC..A.G...C.....UA...UGG...CUGA.....AGCAUU.CA..A..A.GC..GG.C...U...C...-.--................................................................................................GUA.AGUAAUuc..................................................................gcCUG.A..A..G...UACUG.A..G.GUGC..UU.--.................................................................GCA.C.CUC.AG
   NC_010519.1       GAAGCGAAAUAUACCGGUGUUGAC.C.GU....AAA...UCUCGUA.UC.GU..UCAUCUAUCUGUUAAAGCAAA.................................................................................................AGAC.C.AAGCAG...A..AGAAGCGGCGGCAGUUGcaaaug......ugaauaa-............................................................................................-.....agaa.......gaaauUGU....uA---U.U.C....C.-.-..AAA..U.G...C.....AA...UGG...CUGA.....AGCAUU.UA..A..A.GC..GG.C...A...A...A.AG................................................................................................GUG.AAUAAUucau.............................................................ucacuUUU.U..G..G...UUGGC.A..U.GAAU..UA.UA.................................................g..............gAUU.U.AUG.CC
   NC_010554.1       GAAGCUAAAUACACUGGUGUUGAC.C.GU....AAA...AACCGCG.UU.AU..CAACCUGUCUGUUCGUGCUAA.................................................................................................AGAC.G.AAGCAG...A..UGAGAAAGACGCUAUCGcuucugu....aaacaaca-............................................................................................-.....aag.........aagaAGCu...gGUUUU.U.C....A.A.A..CAA..C.G...C.....UA...UGG...CUGA.....AGCUUU.CA..A..A.GC..AG.C...U...A...A.AG................................................................................................GCG.AAUAAUuua................................................................aguUAU.U..A..A...CGGAA.G..G.CAAC..GA.GA.................................................g.............ucGUU.G.CCU.GU
   NC_010694.1       GAAGCCAAGUUCACCGGUGUUGAC.C.GU....AAA...AACCGCG.UU.GU..CAGCCUGUCUGUUCGUGCUAA.................................................................................................AGAC.C.AGGCAG...A..UGAGAAAGAAGCCAUCAacac...........uguu-aacac.................................................................................caaaca-.....gga.........agaaGGC....aACUUC.U.C....-.-.-..UAG..C.G...C.....UA...UGG...CGGA.....AGCAUU.CA..A..A.GC..AG.C...U...A...A.AG................................................................................................GCG.AGUAAU......................................................................---.U..G..C...UUAGG.G..G.CAGC..GC.AA.................................................................GCU.G.CCC.UG
   NC_011312.1       GAAGCGAAGUUCACUGGUGUAGAC.C.GU....AAG...AACCGCG.UA.GU..UAACCUAUCUAUCAAAGCUAA.................................................................................................AGAU.G.AAGCUG...A..UGAGCAAGAAGCAAUGGcgacacug...aauacuaa-............................................................................................-.....acca.......gaagaUG-.....GUGGU.U.U....C.G.G..UAG..C.G...C.....AA...UGG...CUGA.....CGCUUU.CA..A..A.GC..AG.C...U...A...A.AG................................................................................................GCG.AAUAAG......................................................................-UA.A..A..U...UAGAA.G..G.GAGC.aCU.AU.................................................................GCU.C.CCU.UU
   NC_011566.1       GAGUCUAAGUUCAUGGGUGUAGAU.C.GU....AAG...AACCGCA.CC.AU..CAGCCUUUCUAUCCGUGCUAA.................................................................................................GGAU.G.AAGCUG...A..AGAGAAAGAAGCAAUGGcuagcuu.....gaacaag-............................................................................................-.....cagg........aagaCGC.....-UGUC.A.U....G.A.G..CAG..U.G...C.....GA...UGG...CUGA.....AGCGUU.CA..A..A.GC..AG.C...U...C...-.--................................................................................................GUA.AAUAAUc...................................................................gcCUU.G..A..A...GUUCA.G..G.GGUG..CA.UG.................................................................CAC.C.CCU.AA
   NC_011753.2       GAAGCGAAGUUCACUGGUGUAGAC.C.GU....AAG...AACCGCG.UA.AU..CAACCUAUCUAUCAAAGCUAA.................................................................................................AGAU.G.AAGCUG...A..UGAGCAAGAAGCAAUGGcuucacu.....gaacaag-............................................................................................-.....ucug.......augaaGGC.....G-CGU.U.C....-.G.G..UAA..C.G...C.....AA...UGG...CAGA.....CGCAUU.CA..A..A.GC..UG.C...U...A...A.AG................................................................................................GCG.AAUAAUagcuucucauuaag.........................................agaauuauagcuaucUAG.C..C..A...AGAAA.G..G.AGCC..GU.AA.................................................................GGC.U.CCU.UU
   NC_011901.1       GAAGCCAAGUUCAUGGGCGUGGAU.C.GC....AAG...AACCGCA.CC.GU..GACCCUGUCCAUCAAGGCGAA.................................................................................................GGAU.U.ACGCCG...A..GGAAGCCGAGGCGCUGCagg.............acu-............................................................................................-.....acag........cagcA--.....--GC-.U.C....C.G.G..CUC..C.G...C.....CA...CCA...CCUC.....-CCUUG.GG..G..A.UC..UC.C...U...C...A.AG................................................................................................GAG.CA----gaugggcuccaaggac......................................aaguaaggcaauucguAAC.A..A..A...GCCGG.U..C.GGGC..CU.CA.................................................................GCC.C.GGC.CG
   NC_012560.1       GAAGCCAAGAUCAUCAGCAUCGAU.C.GC....AAG...AGCCGUG.UC.AU..CAGCCUGUCGAUCAAGGCCAA.................................................................................................GGAC.G.UGGACG...A..CGAGAAGGACGCCAUCA..................a-ggaacugcgcaagcaggaa.....................................................accgaggcgcccggcccgac-.....cac.........caucGGCg...aCCUGA.U.C....-.-.-..C-G..U.G...C.....UC...AGA...-UGG.....-GCAAC.CA..G..A.GC..UG.A...-...-...-.--................................................................................................GUU.CG----gugg.............................................................ugcguUGA.A..U..G...AAAAG.G..G.CGAC..UU.CG.................................................................GUC.G.CCC.UU
   NC_012691.1       GAAGCCAAAUUCAUGGGCGUUGAC.C.GU....AAA...AACCGUA.CA.GU..GAGCCUGUCAGUUCGUGCUAA.................................................................................................AGAC.G.AAGCUG...A..AGAAAAAACAGCAAUGGauucc........cugaau-c.........................................................................................ag-.....caag........aagaAGC.....UGGUU.U.C....-.G.G..UAA..U.G...C.....AA...UGG...CUGA.....AGCUUU.CA..A..A.GC..UG.C...U...A...A.AG................................................................................................GCG.AAUAAUcg..................................................................cuCUU.A..A..A...AAUGG.A..G.CGGU..GA.AA.................................................................GCC.G.CUC.CA
   NC_012846.1       GAUGCUCGCAUCACAGCAUUUGAU.A.AA....AAA...ACACGUA.AA.AU..UUCAGUAUCGAUUAAAGCUUU.................................................................................................AGAA.A.UUGCAG...A..GGAAAAAGAAGCUGUUGcacaaua....ugguucua-............................................................................................-.....cagac......ucgggUGC.....--UUC.U.C....U.U.G.gUGA..U.A...U.....UC...UUG...GUGC.....UGCUUU.AA..A..A.AA..-A.C...A...-...-.--...........agaacaagau................................................................uaaucaucaau--C.AUUAAAgcu...............................................................uacgGUG.U..U..A...UUAAG.G..U.CACU.c-A.UU.................................................uu............agGGU.G.ACC.UU
   NC_012880.1       GAAGCCAAAUAUACUGGUGUUGAU.C.GU....AAA...AACCGUG.UU.GU..AAGCCUGUCCAUCCGUGCCAA.................................................................................................GGAU.G.AAGCUG...A..CGAGAAAGACGCUAUCGcuucuguu..aauaacaaa-............................................................................................-.....cagg.......aagaaGGC....aAUUUC.U.C....-.-.-..CAA..C.G...C.....UA...UGG...CUGA.....AGCGUU.CA..A..A.GC..UG.C...A...A...A.AG................................................................................................GCG.AGUAAU......................................................................UUC.G..G..U...GGGUU.A..G.GCGG..CG.GG.................................................ac...........uugCCG.C.CCG.AC
   NC_012912.1       GAAGCCAAAUACACCGGCGUUGAU.C.GU....AAG...AACCGCG.UU.GU..UAGCCUGUCCAUCCGUGCCAA.................................................................................................GGAU.G.AAGCUG...A..CGAGAAAGAUGCUAUUGcuucuguu..aacaacaaa-............................................................................................-.....cagg.......aagaaAGC....aAUUUC.U.C....-.-.-..UAA..C.G...C.....CA...UGG...CAGA.....AGCUUU.CA..A..A.GC..UG.C...A...A...A.AG................................................................................................GCG.AGUAAU.....................................................................g-AC.G..G..U...G-GGU.U..A.GGCG..GU.GU.................................................ggc.........uugcCGC.C.UGA.CC
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   NC_018691.1       GAAGGCCGAAUCACCAACAUCGAC.C.GU....AAG...AACCGUU.CC.AU..CAAUGUGUCCGUGCGCGCCAA.................................................................................................GGAU.C.AGGUUC...A..GGAUCGCGAGGCCAUGGacaac........cugcaa-............................................................................................-.....ggcc........aggaUGC....cAAUGC.U.C....C.G.A..AGA..C.-...-.....CA...UUG...GUGA.....-CCUGA.UC..A..A.GC..AG.C...A...A...A.UG...........gaa..............................................................................aaca---.------gcaacgagu....................................................cauaauggcUCC.U..C..C...CGGGG.G..C.CGGC..CA.CG.................................................a..............gGCC.G.GCC.CC
   NC_019566.1       GAUGCUAAAGUUAUCAAUGUUGAC.A.AC....AAA...ACACGUA.GG.GU..ACUGCUAUCCAUUAAGGCCCG.................................................................................................CGAA.G.UCGAAG...A..GGAGAAAAAAGCAAUGCaag.............aau-auggcu................................................................................cuucug-.....aua.........gcggUGC.....GAGUC.U.G....-.G.G..UGA..A.A...U.....UU...UGG...GUGC.....UGCGUU.AA..A..U.CA..-A.C...G...-...-.--...........ugaagaag....................................................................guaaaaaga---.------caaaugauuaguga.........................................aauuuagucuaauag---.-..-..-...---CU.U..G.CAAA..UU.AA.................................................ucuag......uuuacUUU.G.---.--
   NC_019940.1       GAGGCCAAGUUCGUCGGCGUCGAU.C.GU....AAG...AACCGCA.CC.AU..CUCCCUGUCGAUCAAGGCGAA.................................................................................................GGAC.G.UGGAUG...A..AGAGCAGGCGGCCAUCA...................A............................................................................................G.....................GGC.....--UAC.U.C....G.C.G..CGA..U.G...C.....GU...CGA...CGGG.....CACCGC.UA..C..C.CU..--.-...-...-...-.--...........gggcgauauccugaaagag...............................................caaauggaagaggcgcgucGGG.AUUGAUcucccgac.....................................................gccagcccgAUC.G..G..A...CACGA.G..G.CCCG..GC.CC.................................................u..............cCGG.G.CCU.CG
   NC_020888.1       GUUA------UCACUGUCGUUGAU.C.GU....AAG...AAUCGUA.CU.AU..CGCUCUGUCUAUCAAAGCGAA.................................................................................................AGAC.A.GCGUAG...A..CGAUAAAGCAGCAUUGAaa...............ga-acagcgug...........................................................................cgaaagcag-.....acgc........ugagA--u...cACUGG.U.C....C.U.A..CCA..C.-...-.....UA...UUG...GUGA.....CCUGAU.CA..A..A.GA..A-.-...-...-...-.--...........caguuaaaccaaa..........................................................aagacuaagucuug---.------uugag............................................................uuaacCGU.U..U..A...AAGAA.A..C.CCGC..UU.CG.................................................................GCG.G.GUU.UU
   NC_021057.1       GAAGCUAUAUGCACCAGUAUUGAU.C.GC....AAA...AACCGCG.UG.GU..AAGCUUAUCAGUUCGUGCCAA.................................................................................................GGAA.G.AGUCGG...C..AAAAAAAGAUAUAAGUA..................a-cuuaaacaa..........................................................................caaacuagc-.....ag............aaGGU....aACUUA.U.C....-.-.-..CAA..U.G...C.....UA...UGG...CUGA.....AGCAUU.UA..A..A.GC..UG.C...A...AgcaA.GG................................................................................................GUG.AUUAAUaac................................................................aacAGU.U..G..A...AUAGA.G..G.UAAC..UA.U-.................................................................GUU.C.---.--
   NC_021291.1       GAGGCCAAGUUCAUGGCAGUCGAC.C.GU....CGC...AACCGCA.UG.AU..UAGCUUGUCUGUCCGUGCCAA.................................................................................................GGAC.C.AGCAGG...A..UGAGCGAGAGGUCGUGCagga...........uuau-...........................................................................................g-.....gcaa........cacgGGU.....GCCGC.U.G....G.A.A..CGA..C.G...A.....CG...UUG..gGUGA.....-UCUCC.UC..A..A.AG..AG.C...A...G...A.UG...........ucggaucg.....................................................................cgacgccg---.------acgagug........................................................agaucca-CG.A..A..C...GAGCG.C..C.GACC..UU.CG.................................................cgug.......gcgguGGU.C.GGC.GC
   NC_021505.1       GAAGCCAAGAUCAUCAGCGUUGAC.C.GC....AAG...UCCCGCG.UU.AU..CAGCCUGUCGAUCAAAUCGAA.................................................................................................AGAC.G.ACGCUG...A..AGAGCGUGAAGCCAUCCaga............gccu-............................................................................................-.....................---.....-----.-.-....G.A.A..AAA..C.G...C.....UC...CGG...AAGC.....GGCUGC.CG..A..C.AC..CA.C...C...A...-.--...........uggcugcgcugcugcgcgaag...........................................caauggccaagcagaacugag---.------uucugu..........................................................uugaucGGU.A..A..A...AAAGG.G..C.GACC..CU.CG.................................................................GGU.C.GCC.CU
   NC_021870.1       GAAGCGAAAUUCACCGGUGUUGAU.C.GU....AAA...AACCGUG.CU.AU..CAGCCUGUCUGUUCGUGCGAA.................................................................................................AGAC.G.AAGCUG...A..UGAGAAAGAUGCCAUCGcaacugu.....uaacaaa-............................................................................................-.....cagg........aagaUGCa...aACUUC.U.C....U.A.A..UAA..C.G...C.....AA...UGG...CUGA.....AGCAUU.CA..A..A.GC..AG.C...U...A...A.AG................................................................................................GCG.AGUAAU.....................................................................uCUC.U..G..A...AACUU.C..G.GGCG..UU.UU.................................................................AGC.C.CGA.AG
   NC_022576.1       ACCGCUGUCGUCCUCAACAUCGAC.C.GC....AAG...GCCCGCA.GC.AU..CCAAAUCUCGAUCAAGGCUAA.................................................................................................GGAU.G.UCGCCG...A..CCAGAGCGAAGCGAUGGcuaccuu....gcagcagc-............................................................................................-.....aagc........uuccCGCg..agAACGC.A.G....G.G.A..CGA..C.G...-.....AA...CCU...UGGC.....-GCGUU.GU..U..G.CG..UG.C...C...A...A.AC................................................................................................UC-.------......................................................................---.G..A..C...AACCU.G..G.AGUC..CU.AA................................................................aGAC.U.UCU.GG
   NC_023135.1       GACGUCCGCGUCACCAACGUCGAC.U.CC....AAG...ACCCGCC.GU.CU..GGGCCUGUCCAUCAAGGCGCG.................................................................................................UGAG.A.UCGCAG...A..AGAAAAAGAAGCUGUGGaacagu.......auggcu-...........................................................................................c-.....cucgg......acuccGGC.....GCUUC.G.C...uG.G.G..CGA..C.A...U.....CC...UGG...GCGC.....CGCGCU.GA..A..G.UC..GG.-...-...-...-.--................................................................................................GCG.ACUAAUcuccccggccu...............................................cacggcagaaaa--A.C..G..A...AAGCC.C..C.GCAG..GU.UU.................................................................CUG.C.GGG.GC
   NZ_AP012273.1     GAAGCCAAGUUUACCGGUGUGGAU.C.GC....AAG...AACCGCG.CC.CU..GAUGCUGUCCAUAAAGGGCAA.................................................................................................GGAC.U.UCGACG...A..AGAGAAGGCCACCAUCGagag..........cuaca-agucu..................................................................................ggcgg-.....ugcca......cugccGGU.....UCUGC.U.U....-.-.-..---..C.U...C.....--...UGG...GUGA.....-CCUGU.UG..A..A.AG..A-.-...-...-...-.--...........ucaguugucugca...........................................................accaaagacaacgCUG.AGUAAAuc.................................................................cggAUC.A..A..A...GCGGG.G..C.AGCC..C-.--.................................................................GGC.U.GCC.CC
   NZ_AP012978.1     GAGGCCAAGUUCAUGGGCGUCGAU.C.GU....CGC...AACCGCA.GC.AU..CAGCCUGUCGAUCAAGGCCAA.................................................................................................GGAC.U.ACGAAG...A..GGAAAAGGCGCUCAUCUcgca...........guac-aa.......................................................................................cag-.....cga..........ugcGAG.....-C---.U.C....G.G.C..CGG..C.A...A.....GA...CCU...CCAU.....GGCCG-.--..-..A.UC..UG.C...U...C...A.AG................................................................................................GAG.CA----gcucgacgccgacaag.....................................uaaggaacagucugagcUGC.A..U..U...GGCGG.G..G.CAGC..UU.GC.................................................................GCU.G.CCC.CG
   NZ_AP013043.1     GAAGUUUCGAUUGUGAAUGUGGAC.A.GA....AGG...ACUCGCA.AU.AUuuCAGUCAGU--AUUAGAGCUAA.................................................................................................AAAC.U.CAGUGG...A..AGAAAAAGCAGCAAUGGaaga..........uuaca-acaa...................................................................................acaau-.....cuucu......gaugcAGC....aACUGG.U.U....-.-.-..CUA..C.A...U.....--...UGG...GCGA.....UUUGCU.AA..A..A.GA..AG.C...A...A...A.AG...........aag..............................................................................acaa---.------uaag.............................................................uaacaCUU.A..A..A...AACAA.U..C.ACAU..AG.UG.................................................a..............uAUG.U.GAU.UG
   NZ_AP014635.1     GAAGCGAAAUUUACUGGCGUUGAC.C.GU....AAA...AACCGCG.UA.AU..CAACCUGUCUAUCAAAGCGAA.................................................................................................AGAC.G.AAGCUG...A..AGAGCAAGAAGCAAUGGcuacucu.....gaacaag-............................................................................................-.....caag........augaUGC.....UGCGU.U.C....-.G.G..UAA..C.G...C.....UA...UGG...CUGA.....CGCUUU.CA..A..A.GC..UG.C...U...A...A.AG................................................................................................GCG.AAUAAUcg.................................................................accUUU.A..U..A...AAAAA.G..G.AGCC..AUcCU.................................................................GGC.U.CCU.UU
   NZ_AP014836.1     GAGGCAAAAUUUACAGGUAUUGAU.C.GU....AAA...AAUCGGA.UU.AU..UACUGUUUCUAUCCGAGCUAA.................................................................................................GGAU.G.AAGAAG...A..AGAGGCAGAAGUUAUUAaagaa.........uacuc-............................................................................................-.....aggu.......augggAGCu...gCAGCU.U.C....-.-.-..AAC..U.A...C.....AU...UAG...GGGA.....UAUUCU.UA..A..A.G-..AG.C...A...G...A.UG...........ggaaaacaagaa............................................................gaauaaaacuaag--G.CAUAAUuuu...............................................................cuucUGC.U..A..-...-----.-..-.----..--.--.................................................................---.-.---.--
   NZ_AP014862.1     GAAGCCAAGAUCAUCAGCAUCGAC.C.GU....AAG...AGCCGUG.UA.AU..CAGCCUCUCCGUCAAGUCCAA.................................................................................................GGAC.G.UUGACG...A..U----------------...................G............................................................................................A.....................---.....-----.-.-....G.A.A..GGA..C.G...C.....CA...UGA...AGGA.....-ACUGC.GC..A..A.GC..AG.-...-...-...-.--...........gaagucgaguccacgggcccgaccaccauugg.....................ugaccugauccgugcucagauggagaaccaggGCU.AAU---cacccu..........................................................gcaccaUCA.G..C..A...AGAAG.G..G.CGGC..CU.AG.................................................................GCC.G.CCC.UU
   NZ_AP017372.2     GAGGCAAAGUUCAUCGGCGUCGAU.C.GC....CGC...AACCGCC.UU.AU..CAACCUGUCCC----UGCGCA.......................................................................gc......................caGGAG.G.CUGAAG...A..AGAGCAGCAGGCG----...................-guccaggagcacggucgcccaaguccg.....................................agcagugccgggacuacucaacuuggag-.....................---.....-AUCU.A.C....U.A.A..AAG..A.G...C....aAA...UGA..gUAGC.....AGCCGC.GA..U..A.GC..AA.C...G...A...C.UA................................................................................................GCG.GG----......................................................................CCA.G..G..C...UACCG.G..A.UGGC..AG.UG.................................................uu...........gcuGCC.A.UCC.GG
   NZ_AP017423.2     GAAGCCAAGAUCAUCAGCGUUGAC.C.GC....AAG...AGCCGUG.UA.AU..CCAGCUCUCGAUCAAGUCGAA.................................................................................................AGAC.G.UUGAAG...A..CGAGAAAGAAGCCAUCCaa...............ag-ccugcgcga.........................................................................caagccagua-.....gcua........cggaUGCu...cCAGU-.-.-....A.G.C..CAC..C.A...C.....UC...UGG...GUGAc...cUGCUGC.GU..G..C.--..UG.C...A...C...A.AG................................................................................................--C.GGAAAAacagaacuaa.................................................guucugacuuuCUG.U..A..A...AAAAG.G..G.CGAC..UU.CG.................................................................GUC.G.CCC.UU
   NZ_AP017928.1     GAAGCGAAAUUCAUCGGUGUCGAC.A.AG....AAA...AACAAAU.CC.AU..CACUCUCUCGAUCAAGGCAAA.................................................................................................GGAU.C.AAGAAG...A..GGAGGCGGCAGCGAUCAaaggcu.......auucgc-...........................................................................................a-.....gcaauc....uucuucCGC....uAUGC-.-.-....-.-.-..C--..U.A...C.....UU...UGG...GAGA.....CAUUUU.CA..A..G.GA..-A.C...A...G...A.--................................................................................................-UG.GAAAAUaaaua...........................................................gucaggUCA.A..G..C...AAGGG.G..G.CUGU..AU.AU.................................................................GCA.G.CCC.CC
   NZ_AP018558.1     GAAGCGGUGAUCACCAACGUCGAC.C.GG....AAG...AACCGCU.CG.AU..UCAGUUGUCGGUGAAAGCGAA.......................................................................agagcaggccg...agcaagacgaagCGAU.G.AACCGG...A.uCGCUGCCGA--------...................-............................................................................................-.....................---.....--ACA.G.C....C.U.G..CGG..C.G...C.....--...CGG...-CGA.....CGCUUG.GC..G..A.CC..UG.A...U...C...A.AA...........gccaagcugaa...............................................................cgagcagaaac-GG.--UA--aauuggcgcag...............................................ccaugacacgau---.C..C..G...AGCUG.AucG.CGGC..AU.UG.................................................................GCU.G.CUC.AG
   NZ_AP018560.1     GAGGCCAAGUUCACCGGCAUGGAC.C.GC....AAG...GGCCGCC.AG.CU..CGCGCUGUCGAUCCGCGCCAA.................................................................................................GGAC.G.AGGAGG...A..CUUGAGCGAUGCCAUGGccgaaua.....cgccucg-............................................................................................-.....gcca.......gcggcGGC....aCCACC.A.A....G.C.U..CGG..U.G...C.....CU...UGU...-UGA....aGG----.AA..C..A.GC..UG.C...A...C...A.AG................................................................................................GCC.GAGUA-agggcc.........................................................aucgaguCAG.C..C..A...CGCCU.G..C.GGGA..GC.--.................................................gc...........cccUCC.C.GCA.GG
   NZ_AP018685.1     GAAGCGAAAUUUACUGGUGUAGAC.C.GU....AAA...AACCGCG.UA.GU..CAACCUAUCUAUCAAAGCUAA.................................................................................................AGAU.G.AAGCUG...A..AGAGCAAGAAGCAAUGGcgacac......uaaacaa-............................................................................................-.....agcu.......gaugaAGC.....--UGCgU.U....U.G.G..UAA..U.G...C.....UA...UGG...CUGA.....CGCAUU.CA..A..G.GC..UG.C...U...A...A.AG................................................................................................GCG.AAUAAUuca................................................................uuuGCC.U..A..U...AGAAG.G..G.GGCC..UG.AA.................................................a..............gGGC.U.CCC.UU
   NZ_AP018689.1     GAAGCGAAAUUUACUGGUGUUGAC.C.GU....AAA...AACCGCG.UA.AU..CAACCUAUCUAUCAAAGCUAA.................................................................................................AGAU.G.AAGCUG...A..AGAGCAAGAAGCAAUGGcuacac......uaaacaa-............................................................................................-.....agcu.......gaugaAGC.....--UGCgU.U....U.G.G..UAA..C.G...C.....UA...UGG...CUGA.....CGCAUU.UA..A..G.GC..UG.C...U...A...A.AG................................................................................................GCG.AAUAAUuu..................................................................uuGCC.U..A..U...AGAAG.G..G.AGCC..GUaAU.................................................................GGC.U.CCC.UU
   NZ_AP018722.1     UCUGCCAAAAUCACCAACAUUGAC.C.GC....AAA...AACCGUU.CA.GU..UUCUUUGUCUGUAAAAGCGAA.................................................................................................AGAA.G.CUCAAG...A..AGAAGCGCAAGCCAUUAaagg...........uuac-acg......................................................................................gau-.....caaa.......caccu---.....--GUU.G.C....C.G.G..AAC..U.A...C.....UU...UUG...GUGA.....-UCUGU.UC..A..A.--..--.-...-...-...-.--................................................................................................--G.GAUAAGauguaau.......................................................cugaagagUUC.U..U..U...UUAGC.G..C.CUUU..UU.AA................................................................aAAG.G.GCG.UU
   NZ_AP018724.1     GAGGCCAAGUUCAUGGGUGUAGAC.C.GC....AAG...AACCGCA.CC.AU..CACCUUGUCAGUCAAGGCGAA.................................................................................................GGAC.A.GCGAGG...A..GGAGGCGGAAGCCAUGCagga...........cuac-............................................................................................-.....aacc........gcgcCGCa...gCAGCC.G.C....C.A.A..CCC..G.A...C.....GC...UGG...GCGA.....-CCUGC.UG..A..A.GG..AG.C...A...G...A.UG...........gaaa............................................................................acaag---.------aacga...........................................................cugagcAGU.G..A..A...CUGGA.A..G.GCCC..GU.CA.................................................ucc..........ggcGGG.C.CUU.CC
   NZ_AP018725.1     GAGGCCAAGUUUGUUGGUGUUGAU.C.GU....AAG...AACCACA.CG.AU..UACUUUGUCCAUCAAGGCGAA.................................................................................................GGAU.A.GUGAUG...A..CGAGUCAGCUGUUCUGCagga...........uuau-uc.......................................................................................caa-.....cgg.........ugaaGAC....aGCGGC.A.U....G.A.A..GGC..C.A...C.....UC...UUG...GUGA.....UAUCUU.CA..A..G.-C..AG.C...A...G...A.UG................................................................................................GAA.GGUAAAgacu.............................................................aaaacUGU.U..G..C...CGGUG.C..A.GUCC..AU.CG.................................................................GGA.C.UGC.AC
   NZ_AP018933.1     GAAGCACGCAUCGUCAACGUUGAU.C.GC....AAA...ACGCGUA.CC.AU..CAACCUGUCUAUCCGUGCGAA.................................................................................................AGAC.C.AGGCUG...A..AACUCGUAAAGCGAUGAa.................c-............................................................................................-....................aCGC.....UGCG-.-.-....C.G.A..AGA..A.G...A.....AC...CGG...AAGU.....UGCUGG.UC..C..G.AC..CA.-...-...-...-.--...........ccaucggugaucugaucaa..............................................gcagcagcucaaccaggacu---.------gaucugaucagcu............................................cugagugagaccgCUG.U..G..A...AUUGC.C..C.GGGC..CU.UG................................................................uGCU.C.GGG.CA
   NZ_AP019651.1     GAAGCGAAAUUUACUGGCGUUGAC.C.GU....AAA...AACCGCG.UA.AU..CAACCUAUCUAUCAAAGCUAA.................................................................................................AGAC.G.AAGCUG...A..AGAGCAAGAAGCAAUGGcaucuau.....caacaaa-............................................................................................-.....caaga.....ugacgcUGC.....AU---.-.U....C.G.G..UAA..C.G...C.....UA...UGG...CAGA.....CGCUUU.CA..A..A.GC..AG.C...U...A...A.AG................................................................................................GCG.AAUAAUuuaau............................................................ucccuUAU.A..G..C...AAAAA.G..G.AGCC..GA.AA.................................................................GGC.U.CUU.UU
   NZ_AP019654.1     GAAGCGAAAUUUACUGGUGUUGAC.C.GU....AAG...AACCGCG.UA.AU..CAACCUAUCUAUCAAAGCUAA.................................................................................................AGAC.G.AAGCUG...A..AGAGCAAGAAGCAAUGGcaucuau.....caacaaa-............................................................................................-.....caaga.....ugacgcUGC.....AU---.-.U....C.G.G..UAA..C.G...C.....UA...UGG...CAGA.....CGCUUU.CA..A..A.GC..AG.C...U...A...A.AG................................................................................................GCG.AAUAAUuuaau............................................................ucccuUUA.A..G..C...AAAAA.G..G.AGCC..GA.AA.................................................................GGC.U.CCU.UU
   NZ_AP019657.1     GAAGCGAAAUUUACUGGUGUUGAC.C.GU....AAG...AACCGCG.UA.AU..CAACCUAUCUAUCAAAGCUAA.................................................................................................AGAG.C.AAGAAG...C..AAUGGCA---UCUAUCAaca.............agc-............................................................................................-.....aa...........gau-GAc...gCUGCA.U.U....C.G.G..UAA..C.G...C.....UA...UGG...CAGA.....CGCUUU.CA..A..A.GC..AG.C...U...A...A.AG................................................................................................GCG.AAUAAUuuaau............................................................ucccuUUA.A..G..C...AAAAA.G..G.AGCC..GA.AA.................................................................GGC.U.CCU.UU
   NZ_AP019773.1     GAUGCCCACAUCACUGCAUUCGAU.A.AA....AAA...ACACGUA.AA.CU..UUCAGUAUCUAUCAAAGCUUU.................................................................................................AGAA.A.UUGCUG...A..AGGAAAAGAAGCUGUUGcacauua....cgguucua-............................................................................................-.....caga........cucaGGU....gCUUCU.C.U....U.G.G..CGA..U.A...U.....UC...UCG...GUGC.....AGCUUU.GA..A..A.AA..A-.C...A...-...-.--...........aga..............................................................................acaa--G.AUUAAUaugauu..........................................................caauaaAUU.A..A..A...CUUAG.G..U.CGCU..UG.UU.................................................uc...........ucuGGC.G.ACC.UU
   NZ_AP019777.1     GAAGCUAAAUUCGUCGGUGUCGAU.A.AG....AAA...ACCAAGU.CU.AU..UUCUUUGUCCAUCAAAGCGAA.................................................................................................GGAU.G.CGGAAG...A..AGAGUCCAACGCGAUUAaagau........uacucg-............................................................................................-.....caac........aaaaUGC....aGGUAC.U.G....-.-.-..CAA..C.G...U.....--...UGG...GCGA....cAUCUUC.AA..A..C.AA.aUG.G...A...C...A.AG................................................................................................UAA.U-----aa.................................................................aacCAU.C..U..C...CGAGG.G..U.GGCA..UG.GG.................................................ugua........cucaUGC.C.ACC.CU
   NZ_AP019782.1     GAAGCCAAGUUCAUCGGCGUGGAC.A.AG....AAG...ACCAAGA.GC.AU..CAGCCUCUCUAUCAAGGCUAA.................................................................................................GGAU.A.CCGAGG...A..AGAAACCGCCGUGCUGAa................gg-gguaca................................................................................cccaac-.....ag............caGAC....gACGGG.U.G....C.C.G..CCA..C.-...-.....CU...UGG...GCGA....cAUCUUC.AA..G..G.--..AG.C...A...G...A.UG...........ga................................................................................gaa---.------guaa.............................................................gucga-CG.C..G..G...AAAAG.G..G.GGCA..CA.CG.................................................................UGC.C.CCC.UU
   NZ_AP019783.1     GAGGCCAAGUUCAUCGGCGUGGAC.A.AG....AAG...AACAAGA.CC.AU..CACCCUGUCCAUCAAGGCCAA.................................................................................................GGAC.C.AGGAAG...A..AGAAGCCGCCGCCAUCA...................A............................................................................................G.....................GGCu..auUCGCA.G.C....A.G.G..CAU..C.G...U.....CC...GGG...AUGC....cGACCUU.GG..G..C.GA..--.-...-...-...-.--...........caucuucaagg..............................................................aacagauggaga---.------acaagu.........................................................aauccgg--C.C..A..A...GCAAG.G..G.GGGC..GC.GA.................................................................GCC.C.CCC.UU
   NZ_AP020335.1     GAAGCGAAAGUGAUGAAUGUCGAU.C.GU....AAA...AACCGUA.CG.CU..UUCUCUUUCUGUAAAAGAAAA.................................................................................................AGAA.G.CUCAGG...A..AGAAGCAAACGCGAUUA..................a-agacuauucaucaucacaaccgcaagc......................................agcaaguacuauuggugacuugcuaaa-.....ag...........gucAGC.....UUUCU.A.C....U.G.A..CGA.gU.A...A.....AA...UGC...AACAa..acUGCUCU.AU..C..-.--..--.-...-...-...-.--...........ucucguuuaagaga........................................................uggaguagugccuag--U.CUUAAU......................................................................AGA.C..U..-...-UAUG.G..G.GGAU..GG.--.................................................................AUA.U.CCC.AU
   NZ_AP021869.1     GAAGCGAAAUUUACUGGUGUUGAC.C.GU....AAA...AACCGCG.UA.AU..CAACCUAUCUAUCAAAGCUAA.................................................................................................AGAU.G.AAGCUG...A..AGAGCAAGAAGCAAUGGcuacucu.....aaacaaa-............................................................................................-.....gcug........acgaAGC.....UUCGU.U.U....-.G.G..UAA..C.G...C.....UA...UGG...CUGA.....CGCAUU.CA..A..G.GC..UG.C...U...A...A.AG................................................................................................GCG.AAUAAUca..................................................................uuGCC.U..A..U...AGAAG.G..G.AGCCgcUA.AU.................................................................GGC.U.CCC.UU
   NZ_AP021884.1     GAGGCGAUGAUCAUCAAUAUCGAC.C.GU....AAA...AACCGCA.GU.AU..CAAUCUUUCGGUAAAAGCCAA.................................................................................................GGAU.A.AUGCUG...A..ACAGACCGAGGCACUGC..................a-aaagcuggcgggcgaucaa.....................................................uccgcgaguaccggcacgac-.....................---.....CAGUC.U.G....G.GuG..CGC..U.A...U.....--...UGA...AGGCc...aAGCUUG.AU..A..A.UA..A-.-...-...-...-.--...........gaacc...........................................................................ucgag---.------uccugaaaggcgug..........................................uccaugaccaagucGGA.G..C..U...GAUUG.U..G.CGGC..UU.--.................................................................GCC.G.CGC.GC
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   NZ_CP015093.1     GACGUGCGCGUCACCAAUAUCGAC.A.GC....AAG...ACCCGCC.GU.CU..GGGCCUGUCGAUCAAGGCACG.................................................................................................CGAG.A.UCGCCG...A..AGAGAAAGAGGCCGUGGaacagu......acggcuc-............................................................................................-.....cucgg......acuccGGCg...cAUCGC.U.-....G.G.G..CGA..C.A...U.....CC...UGG...GCGC.....GGCGCU.GA..A..A.GG..CG.A...C...A...A.--...........cugagcc......................................................................ugacgcgc---.------gcucg...........................................................cgcaagAGA.C..G..A...GAGGC.C..C.CGCC..GG.AG.................................................cga..........uccGGC.G.GGG.CC
   NZ_CP015231.1     GACGUGCGCGUCACCAACAUCGAC.U.CC....AAG...ACCCGUC.GU.CU..GGGUCUGUCGAUCAAGGCACG.................................................................................................CGAG.A.UCGCAG...A..AGAGAAAGAAGCCGUGGaacag........uacggu-u.........................................................................................cu-.....uccg.......acuccGGC....gCGUCC.C.U....C.G.G..CGA..U.A...U.....CC...UUG...GCGC.....AGCGCU.GA..A..G.AA..CG.-...-...-...-.--................................................................................................---.ACUAAUucguucu........................................................uauaaagAUC.U..A..G...AAAGC.C..C.CGCA..GG.AG.................................................cga..........uccUGC.G.GGG.CU
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   NZ_CP016397.1     GAGGCAAAAAUUAUCAAUAUUGAU.A.AG....AAA...AACCGCA.CC.AU..CGCACUUUCUGUUAAAGCGAA.................................................................................................GGAU.G.CUCAAG...A..UCAAGCUGAAGCUAUCAaaaa...........auau-uc........................................................................................ac-.....gaag........uggu---ga.ugUGGCU.U.-....C.A.A..CUA..C.A...U.....--...UGG...GUGA.....UUUGCU.UA..A..A.GA..--.-...A...A...A.A-...........auggcaagu...................................................................aaagaaggc--G.AAUAAUuuug..............................................................ucugAAC.U..A..A...AAAAA.G..C.GUAG..AU.AU.................................................................CUA.C.GCU.UU
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   NZ_CP016605.1     GAAGCAAAAUAUACUGGAGUGGAU.C.GC....AAA...GCUCGUA.UU.GU..UCAUUUAUCUGUACGUGCUAA.................................................................................................AGAU.C.AAGCUG...A..AGAAGCAACAGCAAUGGcaaaugug..aauaacaag-............................................................................................-.....caaga.....agaaguUGC.....--UAU.U.C....C.A.A..--A..U.G...C.....GA...UGG...CUGA.....AGCAUU.UA..A..A.GC..AG.C...U...A...A.AG................................................................................................GCG.AAUAAUuaaga............................................................uucccUUA.A..A..A...AAUUA.G..C.CUGA..UA.UA.................................................u.............uuUCA.G.GCU.AA
   NZ_CP016616.1     GAUGCCCGCGUCACGCAGUUCGAC.C.GC....AAG...GCCCGCC.GC.GU..CACCGUCUCCAUCAAGGCCCU.................................................................................................CGAG.G.UCGCCG...A..GGAGAAGGAAGCCAUGGcucag.........uacgg-............................................................................................-.....c.............ucGGC....cGAUU-.-.C....G.G.G..UGC..G.-...-.....UC...GCU...CGGC.....GACAUC.CU..C..G.GC..--.-...-...-...-.--...........gccgcc.........................................................................cugaagGCC.AA----ggacaagaaguaaucgg....................................gcucugaacgucagaguUUG.A..U..G...GAUCC.C..C.GGGC..UC.CG.................................................................GCC.C.GGG.GA
   NZ_CP016878.1     GAAGCCAAGUUCGUGGGCAUGGAC.C.GU....AAG...GGCCGCA.CC.CU..GCAGCUGUCGAUCAAGGCCAA.................................................................................................GGAC.G.AUGCCG...A..AAUGCGCGAAACGAUGGagga...........auac-caguc..................................................................................cucuu-.....ccg..........cagCGUc..ggGCGGC.A.U....G.A.-..CUC..A.G...C.....--...UGG...GCGC.....-GCUGC.UG..C..G.--..UG.C...A...C...A.G-...........uugaacagcaacaagu....................................................ccgaguaagcgcguagc---.------gcucgc.........................................................aagagcgUGA.U..G..G...AUCGG.C..C.CGGG..CU.UG................................................................cCCC.G.GGC.CG
   NZ_CP016895.1     GAAGCGAAAAUCAUCAACGUUGAU.C.GU....AAA...UCUCGCU.CU.AU..CAACUUGUCGAUCAAAGCGAA.................................................................................................AGAU.G.AAGCUG...A..AGAGAAAGAAGCUGUUGcaagcuu.....gcgucaa-aaca...................................................................................cugca-.....gc...........acaAGA....cAAUGG.U.C....C.U.A..AAA..C.C...-.....--...--A...UUGG.....UGAUUU.GA..U..C.AA..AG.C...U...C...A.AA...........ugaacaacuaagcagug...................................................cuguaaaaaaguauuuu---.-GUAAUguaacuaauuaaua.........................................cuuuuuauacaaauaCUG.U..U..A...AAGGU.A..G.CGUG..GU.AA.................................................ucaa........uuacUGC.G.CUA.CC
   NZ_CP016948.1     GAAGCUAAAUUCACCGGCGUUGAC.C.GU....AAG...AACCGCG.UU.GU..AAGCCUGUCCGUACGUGCUAA.................................................................................................GGAC.G.AAGCUG...A..CGAGAAAGACGCCAUCGcaacuguu..aacaacaaa-............................................................................................-.....cagg.......aagaaGGC....aACUUC.U.C....-.-.-..UAA..C.G...C.....AA...UGG...CUGA.....AGCUUU.CA..A..A.GC..GG.C...U...A...A.AG................................................................................................GCG.AGUAAU......................................................................---.G..A..C...GGGGG.G..C.GGUC..UC.U-.................................................................GGC.C.GCC.CC
   NZ_CP017415.1     GAAGCCAAGUUCAUGGGUGUGGAU.C.GU....AAA...AACCGUA.CG.AU..CACGCUCUCGAUCAAGGCCAA.................................................................................................GGAA.U.UUGCCG...A..AGAAGCCGAG-------...................G............................................................................................U.....................---.....--GCU.G.C...aG.G.A..UUA..CaG...C.....AG...UGG...CAGC.....GGCGGU.GC..G..A.CG..AC.C...U...C...U.UU................................................................................................GGG.CGAAUUgcucaaggaaaagauggacgccaauaau.............cgguccugacuuucaagugucuugcuaggCGC.A..U..C...AUGGG.C..G.GUAC..CU.AA.................................................a.............cgGUG.C.CGC.CC
   NZ_CP017454.1     GAAGCCAAAUAUACUGGUGUUGAU.C.GC....AAA...AACCGUG.UU.GU..CAGCCUGUCCGUCCGUGCCAA.................................................................................................GGAU.G.AAGCUG...A..CGAGAAAGAUGCUAUCGcuucuguu..aauaacaaa-............................................................................................-.....cagg.......aagaaAGC....aAUUUC.U.C....-.-.-..UAG..C.G...C.....CA...UGG...CUGA.....AGCUUU.CA..A..A.GC..UG.C...A...A...A.AG................................................................................................GCG.AGUAAUgac...............................................................ggug---.-..-..-...--GGU.U..G.GGCG..GU.GG.................................................cgaug......cuugcCGC.C.CUG.CC
   NZ_CP017476.1     ACCACCGUGGUGAUGAACGUGGAC.C.GC....AAG...ACCCGCA.AC.AU..CCAGUUGUCGAUCAAGGCCAA.................................................................................................AGAC.G.CUGUGG...A..CCAGCAAGAAGCCAUGUcga............cccu-gagccagcagucuucgcgu......................................................gaaaacgccggcaccacca-.....gc...........cugGGCg...cAUUGC.U.G....C.-.-..---..-.G...-.....--...-CG...CCAA.....GUUGGA.CA..A..C.AA..--.C...A...A...-.--...........cugauccau...................................................................cagcgggcuUUG.CCG---c...................................................................agGGC.G..G..C...CCAAA.G..A.CGCG..UU.CA.................................................................AGC.G.UCU.UU
   NZ_CP017480.1     GAGGCGAAGUUCACCGGCAUGGAC.C.GC....AAG...GGCCGUC.AG.CU..GCAGCUUUCCAUCCGCGCCAA.................................................................................................GGAC.G.AGGAAG...A..CGUGGCCGAUGCCAUGGcuga..........cuacg-............................................................................................-.....ccu.........cggcUGCu...gGUGGC.A.C....-.G.A..CCA..A.G...C.....--...UCG...GUGC....gCUCCUC.AA..A..G.--..AG.C...A...G...A.UG...........aac..............................................................................aagg---.------ccgac............................................................uaacc-GU.C..G..G...GCGAG.G..G.GCGG..UU.CG.................................................................CCG.C.CCC.UC
   NZ_CP017482.1     GAAGCGAAAUACACCGGUGUUGAU.C.GU....AAA...AACCGUG.UU.GU..UAGCCUGUCUGUUCGUGCGAA.................................................................................................AGAC.G.AAGCUG...A..CGAGAAAGAUGCAAUCGcaacuguu..aacaacaag-............................................................................................-.....ccgg.......aagaaAAC....aAUUUC.U.C....-.-.-..CAG..C.G...C.....GA...UGG...CAGA.....AGCGUU.CA..A..A.GC..AG.C...U...A...A.AG................................................................................................GCG.AGUAAUcac................................................................uac-G-.G..U..G...GAAUG.A..G.CAAC..GU.AA.................................................................GUU.G.CUC.AU
   NZ_CP017561.2     AACGCGAUGGUCAUUAACAUCGAU.C.GC....AAA...UCGCGUG.GC.AU..CAACCUGUCGAUCAAGGCGAA.................................................................................................GGAU.U.CGGCUG...A..GCAGCAGGAAGCCAUCCgcggccucg.cugcuuccg-............................................................................................-.....auucg......agcgcAGC....cGCUAC.C.G....G.C.A..CGA..C.G...A.....AC...C--...UCGG.....UGCGUU.GC..U..G.AA..GG.C...-...-...-.--................................................................................................---.--UAAGcuc...............................................................gacgGCC.A..A..A...ACCAG.U..A.AGCC..UG.AG................................................................aGGU.C.UGC.UG
   NZ_CP017689.1     GAAGCUAAGUUUGUUGGUGUUGAU.C.GU....AAG...AACCGCA.CU.AU..CAGCCUUUCUAUCAAAGCGAA.................................................................................................AGAC.C.AAGCUG...A..AGAACGUUCUGCAAUGGaaaa..........cuuaa-...........................................................................................a-.....ccaa.......gcugaAGA....cACUGG.U.U....U.-.-..AAG..C.G...C.....AA...UGG...CAGA.....AGCAUU.CA..A..A.AA..CG.C...U...A...A.AA...........acuaauugaaauuuaacaau.............................................uuacguuaaauuacaaaguuUUU.UGUAAA......................................................................AAU.U..A..A...GAAAG.C..C.GCUA..AC.AC.................................................................UAG.C.GGC.UU
   NZ_CP017715.1     GAAGCUAAGAUCAUCAGCAUCGAU.C.GU....AAG...AACCGCA.UC.AU..CAACCUGUCUGUGAAGUCCAA.................................................................................................AGAU.G.UUGAGG...A..CGACAAGCAGGCACUUG..................a-...........................................................................................a-.....g..............gUGU....g-----.-.C....G.G.G..CGA..A.-...-.....AA...CGG...CUGA.....AUCUUC.UG..G..U.GC..--.-...-...-...-.--...........gaccaccauuggugaucucaucaagga..............................gcagaugcagcagcagaacgccaacaag---.------gacugauu.....................................................uuccgguugGUA.A..G..A...AAAAA.C..G.GGCU..CUaAG.................................................................AGC.C.CGU.UU
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   NZ_CP017886.1     GAAGCCAAGAUCAUCAGCGUUGAC.C.GC....AAG...AGCCGUG.UA.AU..CCAGCUCUCGAUCAAGUCGAA.................................................................................................AGAC.G.UUGAAG...A..CGAGAAAGAAGCUAUCCag..............agc-cugcgcgaca.......................................................................agccagccucg-.....gaca........gcauCGC....uGCUGG.U.C....C.U.A..CCA..C.U...C.....--...UGG...GCGA.....-CCUGU.UG..C..G.--..UG.C...A...C...A.AA...........ugg..............................................................................aaaa---.------acagaacuaag................................................uucugucggacCAU.A..G..A...AAAAG.G..G.CGAC..UU.CG.................................................................GUC.G.CCC.UU
   NZ_CP018029.1     GAAGCGAAGUUUAUGGGCGUUGAC.C.GU....AAG...AACCGCA.CU.GU..UAACCUAUCUGUUAGAGCGAA.................................................................................................AGAU.C.AGGCUG...A..CGAAAAAGAAGCUAUCGacaaa.........guuaa-c.........................................................................................ca-.....gcaa.......gaagaUGU.....UGGUU.U.C....-.G.C..UAA..C.G...C.....GA...UGG...CAGA.....AGCAUU.UA..A..A.GC..UG.C...U...A...A.AG................................................................................................GCG.AAUAAU......................................................................-GC.U..U..U...UGUGG.G..U.GUGC..AC.AC.................................................................GCA.C.ACC.CA
   NZ_CP018059.1     GAAGCUAAAAUUGUCGGCGUUGAC.C.GU....AAA...UCUCGCA.AU.AU..UAGCCUAUCAAUCAAGGCAAA.................................................................................................AGAU.G.AAGCUG...A..UGAGCGUCAAGCCAUUAaaga...........gcuu-ucu.....................................................................................aaua-.....cagca......gcugaAAC.....ACAG-.-.C....C.A.A..AAA..C.A...C.....U-...UGG...-CGA.....UAUUUU.CGguG..A.GC..AG.C...U..uA...A.AG................................................................................................GC-.--UGAUugcccugaau.................................................augauuaagccUAU.U..A..A...AAAGA.G..C.GGUG..UU.GG................................................................uCAU.C.GCU.CU
   NZ_CP018139.1     GAGGCCCGCAUCAUCGGUGUCGAC.C.GC....AAG...AACCGCC.AG.AU..CGCCCUGUCCAUCAAGGCCAA.................................................................................................GGAU.C.AGGACG...AcaCGCGUCAGAACCUCAAG..................a-agcugcg.............................................................................cgaagaga-.....gca..........ccgAGU.....CCGGU.G.C....G.A.-..--C..C.A...C.....CA...UCG...GUGA.....--CCUC.AU..C..A.--..AG.C...A...G...C.AG...........augg............................................................................gucag--G.ACUGAUcacgcgggaacc.............................................uucccguccaucgGUC.G..A..C...AAGGC.G..C.CGCC.cCU.CG................................................................gGGC.G.GCG.CC
   NZ_CP018321.1     GAAGCGAAGUUCAUGGGCGUUGAC.C.GU....AAG...AACCGCA.CU.GU..UAACCUAUCUGUUAAAGCGAA.................................................................................................AGAU.C.AGGCUG...A..CGAAAAAGAAGCUAUCGauaaa.........guuaa-c.........................................................................................ca-.....gcaa.......gaagaUGU.....UGGUU.U.C....-.G.C..UAA..C.G...C.....GA...UGG...CAGA.....AGCAUU.UA..A..A.GC..UG.C...U...A...A.AG................................................................................................GCG.AAUAAU......................................................................-GC.U..U..U...UGUGG.G..U.GUGC..AG.AU.................................................................GCA.C.ACC.CA
   NZ_CP018420.1     GAAGCCAAGAUCAUCAGCGUUGAC.C.GC....AAG...AGCCGCG.UA.AU..CCAGCUCUCCAUCAAGUCGAA.................................................................................................AGAC.G.AUGCUG...A..AGAGAAAGAAGCCAUCCag..............agc-cugcgcgaca.......................................................................agccagcuacc-.....ucug........agcc---uu.cuGCUGG.U.C....C.U.A..CCA..C.U...C.....--...UGG...GCGA.....-CCUGC.UG..C..G.--..UG.C...A...C...A.AA...........ugg..............................................................................aaaa---.------acagaacugag................................................uucugucagacCAU.A..G..A...AAAAG.G..G.CGAC..UU.CG.................................................................GUC.G.CCC.UU
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   NZ_CP018787.1     GAAGUGAUGAUCAUCAACAUCGAU.C.GU....AAA...UCACGUA.CG.CU..UCAAUUGUCGAUCAAGGCCAA.................................................................................................GGAC.C.AGCAGG...A..AACCCAGGAAGCCAUGCagaa...........aauc-cag.....................................................................................agug-.....auucc......agcgcAGC....cUCCGG.-.-....-.-.-..-CA..U.G...A.....CC...AGC..cUUGG.....UGCUUU.GU..U..A.AA..AG.C...A...A...A.AU...........ucgacaac.....................................................................aaguaauc--A.UUUAAU.....................................................................cAAG.A..G..U...GCGAA.A..U.GACC..AA.AU.................................................ccg.........aauuGAU.C.GUU.UC
   NZ_CP018835.1     GAAGCGAAAUUUACUGGUGUAGAC.C.GU....AAG...AACCGCG.UU.AU..CAACCUAUCUGUCAAAGCGAA.................................................................................................AGAU.G.AAGCAG...A..AGAGCAAGAAGCAAUGGcuucacu....gaacaagc-............................................................................................-.....aaga........ugaaGGC.....G-CGU.U.C....-.G.G..UAA..U.G...C.....UA...UGG...CUGA.....UGCUUU.CA..A..G.GC..UG.C...U...A...A.AG................................................................................................GCG.AAUAAUau..................................................................caUUC.G..C..A...AAAAA.G..G.AGCC.uAU.CG.................................................................GGC.U.CCU.UU
   NZ_CP018839.1     GAGGCGCUGGUGAUCAAUGUCGAU.C.GC....AAG...ACCCGCU.CG.AU..CAGCCUGUCGAUCCGCGCCAA.................................................................................................GGAC.C.AGGCCG...A..GCAGUCGGAAGCCAUGAgcaag.........cuugc-............................................................................................-.....uuc.........cgagAGC.....UCGGC.U.G....C.C.A.cCGG..C.A...C.....GA...CCA...AUCU.....CGGUGC.--..-..-.CC..UG.C...U...C...A.AG...........gccaagcugaacgagcagaagcag....................................uaauccggacgaucaugaccaaaucGGA.GCUGAUcgc................................................................ccaGCU.U..G..-...-----.-..-.----..--.--.................................................................---.-.---.--
   NZ_CP019236.1     ACCGCCGUGGUGGUCAACGUGGAU.C.GC....AAG...ACCCGCA.AC.AU..CCAGCUGUCGAUCAAGGCCAA.................................................................................................GGAU.G.CAGCCG...A..CCAAAGCGAAGCGAUGCa.................g-ucgcugagccagcaau............................................................ccgcgcgugaaaacgc-.....cgg..........cacCAC....cAGCCU.G.G....G.U.G..CCC..U.G...C.....UG...CGC...GCCA.....AGCUGG.AC..A..A.--..--.-...-...-...-.--...........c..................................................................................aa--C.AAUAACua..................................................................agUUG.U..U..G...AACGG.U..U.GAGC..UC.AG.................................................................GCC.G.AUC.CG
   NZ_CP019239.1     ACCGCUGUGGUUGUCAAUGUGGAU.C.GC....AAG...ACCCGCA.AC.AU..CCAGUUGUCCAUCAAGGCCAA.................................................................................................GGAC.G.CUGCGG...A..CCAAGGCGAAGCCAUGGcugcuc......ugagcca-ggcaucugcccguga.............................................................aaacgcugguaccacc-.....agc..........cugGGC.....GCUC-.U.G....-.-.-..CUG..C.G...C.....--...-G-...CCAA.....ACUGGA.CA..A..C.--..--.-...-...-...-.--...........aacaac........................................................................uaagacu---.------ugcug............................................................uugaaCUG.A..A..U...GAACG.A..C.CGGC..UG.CG.................................................cgugu......gugugGCC.G.GUC.GU
   NZ_CP019240.1     ACUGCUGUGGUCGUCAACGUGGAU.C.GC....AAG...ACCCGCA.AC.AU..CCAGUUGUCCAUCAAGGCCAA.................................................................................................GGAU.G.CUGCUG...A..CCAGAACGAAGCCAUGGccacuu.......ugagcc-............................................................................................-.....................AGC.....-AGUC.U.G....C.-.-..CCG..C.G...A.....AA...ACG...CCGGca.ccACCAGC.CU..G..G.--..--.-...-...-...-.--...........gugcuuugcugcgcg......................................................cuaagcuggacaacaa---.------cugaucgggu..................................................uuuugcuccaUUG.A..U..C...UGACG.A..C.CGGC..UG.CA.................................................cccg.......cgugcACC.G.GUC.GU
   NZ_CP019343.1     GAAGUUAAGAUCAUCACUGUUGAU.C.GU....AAG...AAUCGUA.CU.AU..UGCACUGUCUAUCAAGGCUAA.................................................................................................AGAU.A.UGGCUG...A..UGAGAAAGAAGCCAUUAaag............cgca-uaaaga...............................................................................aucugaa-.....gc...........agaAGC....uGCUGC.U.C....C.U.G..CCA..C.-...-.....CA...UUG...GUGA.....CCUGAU.CA..A..G.GC..--.-...-...-...-.--...........ccaaauggaugguaaagaguaagau..................................uccuaagucuguauuaguucacguuu---.------ugcg.............................................................cuaagUUG.U..U..G...AUGGG.G..G.UGAA..U-.--.................................................................UUU.U.CCC.CU
   NZ_CP019437.1     CGCGUG------ACCAACGUCGAC.U.CC....AAG...ACCCGCA.AG.CU..GGGUGUGUCGAUCAAGGCGCG.................................................................................................CGAG.A.UCGCUG...A..AGAGAAAGAAGCCGUGGaaca..........guacg-gcu......................................................................................cgu-.....cgga........cucgGGU.....GCGUC.G.C...uG.G.G..CGA..C.A...U.....CC...UGG...GCGC.....CGCGCU.CA..A..G.G-..-G.C...G...A...-.--................................................................................................-CA.AGUAAGagaucggac....................................................cgcucggucCAU.C..C..G...GAGGC.C..C.CGCC..GU.UU.................................................................GGC.G.GGG.CC
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   NZ_CP019650.1     GAGACCAAGAUCACCAGUGUGGAU.C.GU....AAG...AACCGCG.UG.AU..CAGCCUCUCCAUCAAAGCUAA.................................................................................................GGAU.C.AGGACG...A..CGAGAAGCAGGCCAUCAagg............acca-cagc....................................................................................aaga-.....ag............caGGCug.aaCAGGU.U.C....A.G.C..CGG..CgA...C.....UA...UCG...GUGA.....CCUGAU.--..-..-.--..--.-...-...-...-.--................................................................................................---.------caag..............................................................gcccAGA.U..G..A...AUAAC.A..A.GGAC..UA.AU................................................................aGUCuC.UUG.UU
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   NZ_CP086111.1     GACGCCAAGGUCACCCAGGUCGAU.C.GC....GGC...GGCCGCC.GC.AU..CAGCCUGUCGAUCAAGGCGAA.................................................................................................GGAA.G.UGGAAG...A..AGAGAAGCAGGCCAUGCagga...........guuc-ggg......................................................................................ucg-.....uccg.......acuccGGC....gCGAGC.C.U....G.G.G..CGA..C.A...U.....CC...UGG...GUGC.....GGCGCU.GC..G..C.CG..CG.C...C...C...A.GA...........g...................................................................................c---.------......................................................................--A.A..G..G...AGCAG.A..G.CGAC..GA.GU.................................................aau.........cuccGUC.G.CGC.UG
   NZ_CP086253.1     GAAGCGAAAUACACCGGUGUUGAU.C.GU....AAA...AACCGCG.UU.GU..UAGCCUGUCUGUUCGUGCGAA.................................................................................................AGAC.G.AAGCUG...A..UGAGAAAGAUGCAAUCGcaacuguu..aacaacaag-............................................................................................-.....ccgg.......aagaaAAC....aAUUUC.U.C....-.-.-..CAG..C.G...C.....GA...UGG...CAGA.....AGCGUU.CA..A..A.GC..AG.C...U...A...A.AG................................................................................................GCG.AGUAAUcac................................................................uac-G-.G..U..G...GAAUG.A..G.CAAC..GU.AA.................................................................AUU.G.CUC.AU
   NZ_CP087711.1     GAAGCGAAGUUCACCGGUGUUGAC.C.GU....AAG...AACCGCG.UU.GU..AAACCUGUCUGUUCGCGCUAA.................................................................................................AGAC.C.AGGCUG...A..AGAAAGCGAAGCAAUGGcuacucu.....gaacaag-............................................................................................-.....caag........augaUGC.....UGCGU.U.C....-.G.G..UAA..C.G...C.....UA...UGG...CUGA.....AGCAUU.CA..A..A.GC..AG.C...U...A...A.AG................................................................................................GCG.AAUAAUu....................................................................aACC.G..U..A...CUCAG.G..C.GGUC..AG.CU.................................................................GAC.C.GCC.UG
   NZ_CP087715.1     GAGACCAAGAUCACCAGCGUGGAU.C.GC....AAG...AACCGCG.UG.AU..CAGCCUCUCCAUCAAAGCCAA.................................................................................................GGAU.C.AGGACG...A..CGAGAAGCAAGCCGUCAagg.............auc-acagc.................................................................................aagaag-.....cag.........gcugAGC....aGG--U.U.C....A.G.C..CGG..C.G..aC.....UA...UCG...GUGA.....CCUGAU.CA..A..G.GC..-G.C...A...A...A.UG...........aauaacaaagauuaauagaucuuu....................................gcuauucucggucucggcucaaugaGCC.GG----ggc................................................................uauCCG.A..A..A...GCCGG.A..C.UGGG..GU.UG.................................................................CCC.A.GUC.CG
   NZ_CP087840.1     GAAGCUAAAAUUGUUCGUGCCGAC.C.GC....AAA...GCUCGAA.GC.AU..UACUUUGUCUAUUAAAGCUAA.................................................................................................AGAC.G.AAGCCG...A..UGAG-------------...................-............................................................................................-.....................---.....-----.-.C....G.U.C..AAG..C.A...C.....UA...--A...-AAG.....AGCUGU.CA..A..A.--..UG.C...A...-...-.--...........gccacugaaaaucagccaaaaacuuugggc........................gacaucuuugccgaccaacuaaaaggcuaau---.------cgcu..............................................................uauuUAU.C..A..G...AAGAC.C..U.UGAA..GU.GA.................................................................UUC.A.AGG.UC
   NZ_CP088280.1     GAUGCCCGCGUGAUCCAGUUCGAC.A.AG....AAG...GCCCGCA.AG.GU..CCAGGUGUCGAUCAAGGCGCU.................................................................................................CGAA.G.UCGCCG...A..AGAGAAGGAAGCCAUCGcgcaguac..ggcuccucc-............................................................................................-.....gauu........cgggGGC.....GACGC.U.C....G.G.U..GAC..A.U...U.....CU...CGG...CACC.....-GCGCU.CA..A.gA.AC..CG.C...G...A...C.AA................................................................................................GUA.AG----cgaaacgccu..................................................guuucgcaacC--.A..U..C...AAAGC.C..C.CGGC..GC.AA.................................................................GCC.G.GGG.CU
   NZ_CP088980.1     GAGGCCAAGUUCACCGGUAUGGAU.C.GC....AAG...GGUCGCC.AG.CU..GGCGCUCUCGAUCCGCGCCAA.................................................................................................GGAC.G.AGGAAG...A..CGCGCCCGACACG----...................-ucgguggauua.....................................................................cucguccgcggc-.....................---c...aGCGGC.A.C....-.G.A..CCA..A.G...C.....U-...UGG...-UGC.....-GCUGC.UC..A..A.GG..AG.C...A...-...-.--guucaacaagg.....................................................................................CCG.ACUGAUcgccu...........................................................gcagcaGCC.U..G..A...CACGG.G..G.CGGC..AG.CU.................................................ugu.........cgccGCC.G.CCC.CG
   NZ_CP089203.1     GAAGCGAAGUUCACUGGUGUAGAC.C.GU....AAG...AACCGCG.UA.AU..CAACCUAUCUAUCAAAGCUAA.................................................................................................AGAU.G.AAGCUG...A..UGAGCAAGAAGCAAUGGcuucacu.....gaacaag-............................................................................................-.....ucug.......augaaGGC.....G-CGU.U.C....-.G.G..UAA..C.G...C.....AA...UGG...CAGA.....CGCAUU.CA..A..A.GC..UG.C...U...A...A.AG................................................................................................GCG.AAUAAUagcuucucguuaag.........................................agaauuauagcuauaUAG.C..C..A...AGAAA.G..G.AGCC..GU.AA.................................................................GGC.U.CCU.UU
   NZ_CP089309.1     GAGGCCAAGUUCCUGGGCGUCGAU.C.GC....AAG...AACCGCA.CC.CU..UUCGCUGUCGAUGAAGGCGAA.................................................................................................GGAU.G.UCGAGG...A..AGAGCAGGCGGCCAUCA...................Agggcuacucgcgcg...............................................................auucguccaccgcga-.....ccac........ccuuGGCg...aUCUCC.U.C....A.A.A..GAG..C.A...-.....GA...UGG...AAGA.....GGC--U.CA..G..C.GC..GG.C...G...-...-.--................................................................................................GCU.GAUAACccgucacgauguc...........................................ucuugcaugaugucUCU.U..U..A...GGCGG.G..G.CCCG.uAU.CG.................................................................CGG.G.CCC.UU
   NZ_CP089919.1     GAAGCUAAAUUCACCGGUGUUGAU.C.GU....AAG...AACCGCG.UA.GU..AAGCCUGUCCGUCCGUGCUAA.................................................................................................GGAU.G.AAGCAG...A..CGAGAAAGAUGCAAUCGcuguuguu..aacaacaaa-............................................................................................-.....ccag.......acgaaAGC....aACUUC.U.C....-.-.-..UAA..C.G...C.....UA...UGG...CUGA.....AGCGUU.CA..A..A.GC..GG.C...A...A...A.AG................................................................................................GCG.AGUAA-......................................................................---.U..G..A...CGGGG.G..G.CGAC..UC.U-.................................................................GUU.G.CCC.CG
   NZ_CP089932.1     GAAGCUAAAUUCACUGGCGUUGAC.C.GU....AAA...AACCGCC.UU.GU..UAGCCUGUCUGUUCGUGCUAA.................................................................................................AGAU.C.AGGCCG...A..UGAGAAAGAAGCCAUCAauac...........ugug-aacgc.................................................................................uaaaca-.....gga.........agaaGGU....aACUUC.U.C....-.-.-..UAA..C.G...C.....UA...UGG...CUGA.....AGCAUU.CA..A..A.GC..AG.C...U...A...A.AG................................................................................................GCG.AGUAAUag..................................................................cgUGU.U..U..A...ACGAG.G..G.CAGC..GC.AG.................................................................GUU.G.UCC.UU
   NZ_CP089976.1     GAAGCUAAGAUUGUGCGUGUGGAU.C.GC....AAA...UCUCGUA.AU.GU..UGCUUUGUCUAUCAAAGCAAA.................................................................................................AGAC.G.AAGCAG...A..UGAGCGUCAAGCAAUUAaagag.........cuguc-a..........................................................................................a-.....acgcu......gcugu---ag.aaAAUCA.A.C....C.U.A..AAA..C.A...C.....UA...GGC...GAUA.....UUUUUG.CA..G..A.CC..AA.C...U...U...A.AA................................................................................................GGU.--UAAUcaucu...........................................................uuaggu-CA.U..U..U...AAAGA.G..U.GGUG..AUcUU.................................................................CAC.C.ACU.CU
   NZ_CP090029.1     GAAGCCAAGAUCAUCAGCGUUGAU.C.GC....AAG...AGCCGCG.UG.AU..CCAACUCUCCAUCAAGUCGAA.................................................................................................AGAU.G.AAGUGG...A..AGAGAAAGAAGCAAUCC..................a-gagccugaaaucggcuccgg....................................................aagcugcaaccggcgagacc-.....ac...........uauGGCc..ucCCUGC.U.G....-.C.G..CGA..A.G...C.....AA...UGG...CUAA.....A----C.AG..A..A.--..--.-...-...-...-.--................................................................................................---.------cuaaguu........................................................cuguaacGCU.A..U..A...AAAAG.G..G.CGAC..UU.CG.................................................................GUC.G.CCC.UU
   NZ_CP090366.1     GAAGCCAAGAUCAUCAGCAUCGAC.C.GC....AAG...UCCCGCG.UG.AU..CAGCCUGUCCAUCAAGUCCAA.................................................................................................AGAC.G.UCGAAG...A..C----------------...................G............................................................................................A.....................---.....-----.-.-....A.A.A..GGA..U.G...C.....GA...UGA...AAGA.....-GCUGC.GC..A..C.CA..AG.C...A...G...-.--...........gacguagaaagcacuggcccgaccacca............................uuggugaucugauccgugcucagauggaa---.------aaccagaacua...............................................aguucggguucuUCA.U..G..A...AAAAG.G..G.CGAC..CU.CG.................................................................GUC.G.CCC.UU
   NZ_CP090569.1     GAAGCCAAGUUUAUCGGUGUGGAU.C.GC....AAG...AAUCGUA.CU.AU..CUCUCUCUCCAUCAAGGCGAA.................................................................................................GGAU.G.CGGCCG...A..AGAGGCUGAAGCCAUCAagggu.........uaugc-............................................................................................-.....ucgu.......gaugcGGCc...aCCGCC.G.U....-.U.C..CGA..C.G...C.....--...UGG...GCGA.....-CCUUC.UG..A..A.GG..AG.C...A...G...A.UG...........gaaaaucaggg..............................................................cgauuaauucugCCU.CUUCAG......................................................................GGA.A..U..A...AUAGG.G..G.CCGG..GU.AA.................................................................CCG.G.CCC.CU
   NZ_CP090614.1     GAAGCGAAGUUCACAGGUGUUGAC.C.GU....AAG...AACCGCG.UA.AU..CAACCUAUCUAUCAAAGCUAA.................................................................................................AGAU.G.AAGCUG...A..AGAGCAAGAAGCAAUGGcuucacu....gaacaagu-............................................................................................-.....cuga........cgaaGGC.....GC-GU.U.C....-.G.G..UAA..C.G...C.....AA...UGG...CAGA.....UGCAUU.CA..A..A.GC..UG.C...U...A...A.AG................................................................................................GCG.AAUAAUuua...............................................................auuuUUC.G.cU..A...AGAAA.G..G.GGCC..UU.AG.................................................................GGU.C.CCU.UU
   NZ_CP090968.1     GAAGCUAAGUUCACCGGCGUUGAU.C.GC....AAA...AACCGCG.UU.GU..AAGCCUGUCUGUACGUGCUAA.................................................................................................AGAC.G.AAGCGG...A..AGAGAAAGAUGCCAUGGcugccgu.....aaacagc-............................................................................................-.....cagg........acgaUGCa...aACUUC.U.C....C.A.A..CAA..C.G...C.....UA...UGG...CUGA.....AGCAUU.CA..A..G.GC..UG.C...U...A...A.AG................................................................................................GCG.AAUAAU......................................................................---.-..-..G...AUGAG.G..G.CGGC..GU.AA.................................................................GCC.G.CCC.UG
   NZ_CP091088.1     GAAGCCAAGAUCAUCAGCGUUGAC.C.GC....AAG...UCCCGCG.UG.AU..CAGCCUGUCGAUCAAGUCGAA.................................................................................................AGAC.G.ACGCUG...A..AGAGCGUGAAGCUAUCCagagc.........cugaa-a..........................................................................................a-.....acgcu......ccggaAGC....uGCUG-.-.C....C.G.A..CAC..C.A...C.....CA...UGG...CUGC.....-GCUGC.UG..C..GcGA..AG.C...A...A...U.--...........ggccaagc....................................................................agaacugag---.------uucug...........................................................uuugauCGG.U..A..A...AAAGG.G..C.GACC..CU.CG.................................................................GGU.C.GCC.CU
   NZ_CP091244.1     GAAGCGAAAUUCAUGGGUGUUGAC.C.GU....AAG...ACACGUU.CC.AU..CAACCUGUCUAUCAAGGCGAA.................................................................................................GGAU.G.AUGAAG...A..UGAAUCA----CGU---...................-uugaugcgugaguacaccgggc...............................................guucuagcagcacggguacguca-.....................---.....-----.U.U....G.G.G..CGA..C.A...U.....CU...UCA...AGGA.....A-----.CA..G..A.UG..GG.C...G...A...A.UA...........a..................................................................................uu---.------uucgccaucaggauggcac...............................gcaggucagggaugaccuauAGU.U..C..A...GGCGG.U..G.CAGG..UA.CA.................................................c.............uaUCU.G.CAC.UG
   NZ_CP092104.1     GAAGCCCGUUUCAUCGGCGUUGAC.C.GU....AAG...AGCCGCA.CC.GU..GGUGUUGUCGGUUCGUGAGAA.................................................................................................GGAA.A.UCCAGG...A..AGAAGCCGAGGUGGUGGcgga..........auaca-gccgcaaugccuccacu.........................................................ggcaagaccagccugggc-.....gau..........cuuCUC.....AAGGA.U.C....-.A.A..CUU..G.G...C.....AA...CAA...CUGA.....GCCGGU.CU..G..-.--..--.-...-...-...-.--................................................................................................---.------cag...............................................................guguUUU.C..G..G...AAGGC.C..G.CGCA..U-.--.................................................................UGC.G.CGG.CC
   NZ_CP092123.1     GAAGCCAAGAUCACUGGUGUUGAC.C.GU....CGC...AACCGCG.UC.AU..CAACCUGUCUAUCCGCGCGAA.................................................................................................AGAC.C.AGGCUG...A..CGAAAAAGCGGCUCUGAac..............gcg-guucgca..............................................................................accagga-.....agu..........cgaAGU....uCCGGG.U.C....C.G.A..C--..C.A...C.....UA...UCG...GCGA.....-UCUGA.UC..A..A.GC..AG.C...A...G...A.UG................................................................................................GCC.AA----ccagaacaacugauu........................................uuccucuucaguugc-UU.U..A..C...CAAGG.G..G.UGCC..UG.AU.................................................................GGC.A.CCC.CU
   NZ_CP092179.1     AAAGUUAAAAUCUUAGACAUCAAC.AaAC....AAG...AUGAGCG.UA.UC..GCUU-UAUCUAUUAAAGCAAC.................................................................................................UGAA.G.---AGC...A..AGGUCAAGACUUUGA--...................-cgcuucauauuuagauaca.....................................................agcucaaacgacgaugcacc-.....................---.....-AACA.C.U....U.G.G..UGA..C.G...U.....UU...UCG...CUGA.....UAAAUU.CA..A..A.GA..CU.U...A...A...-.AA................................................................................................UU-.-AUAA-ga.................................................................uug-AC.U..C..U...UAAAG.U..A.ACGC..UU.CG.................................................................GCG.U.UAC.UU
   NZ_CP092384.1     GAAGCGAAGUUCACAGGUGUAGAC.C.GU....AAG...AACCGCG.UA.AU..CAACCUAUCUAUCAAAGCUAA.................................................................................................AGAU.G.AAGCUG...A..UGAGCAAGAAGCAAUGGcuucacu....gaacaagu-............................................................................................-.....cuga........agaaGGC.....GC-GU.U.C....-.G.G..UAA..C.G...C.....AA...UGG...CAGA.....CGCAUU.CA..A..A.GC..UG.C...U...A...A.AG................................................................................................GCG.AAUAAUagcuucucauuaag.........................................agaauuauagcuaucUAG.C..C..A...AGAAA.G..G.AGCC..GU.AA.................................................................GGC.U.CCU.UU
   NZ_CP092923.1     GAAGCGAAGAUCAUCAGCGUUGAC.C.GC....AAG...AGCCGCG.UA.AU..CAGCUUGUCCAUCAAGUCGAA.................................................................................................AGAC.G.UUGAAG...A..CGAGAAAGAAGCUAUUCag...............ag-ccugcguagc........................................................................aagccugaag-.....ucgc........ugaaAGC.....ACUGG.U.C....C.U.A..CCA..C.-...C.....AU...UGG...-UGA.....-UCUGC.UG..C..G.--..CG.C...G...C...A.AA................................................................................................--U.GGAAAAacagaacuaa.................................................guucugcuucuCCA.C..A..A...AAAAG.G..A.CGAC..UU.CG.................................................................GUC.G.UCC.UU
   NZ_CP093242.1     GAAGCUAAAUACACUGGUGUUGAU.C.GC....AAA...AACCGCG.UA.AU..CAACCUGUCUGUUCGCGCAAA.................................................................................................AGAC.G.AAGCUG...A..UGAAAAAGAUGCUAUCGcuacugug..aacaacaaa-............................................................................................-.....cagg........aagaUACu...aACUUU.G.C....A.A.A..CAA..C.G...C.....UA...UGG...CUGA.....AGCUUU.CA..A..A.GC..AG.C...U...A...A.AG................................................................................................GCG.AGUAAUu...................................................................aaGUG.A..U..A...UUAGG.G..U.AGUC..GA.U-.................................................................GAU.U.ACC.CU
   NZ_CP093328.1     GAAGCUAAAUUCACCGGUGUUGAU.C.GU....AAG...AACCGCG.UA.GU..AAGCCUGUCCGUCCGUGCUAA.................................................................................................GGAC.G.AAGCAG...A..CGAGAAAGAUGCAAUCGcuguuguu..aacaacaaa-............................................................................................-.....ccag.......acgaaAGC....aACUUC.U.C....-.-.-..UAG..U.G...C.....UA...UGG...CUGA.....AGCGUU.CA..A..A.GC..GG.C...A...A...A.AG................................................................................................GCG.AGUAA-......................................................................---.U..G..A...CGGGG.G..G.CGGC..UC.A-.................................................................GUC.G.CCC.C-
   NZ_CP093332.1     GAAGCUAAAUUCACUGGCGUUGAC.C.GU....AAA...AACCGUG.UU.GU..AAGCCUGUCUGUUCGUGCUAA.................................................................................................GGAC.G.AAGCUG...A..CGAGAAAGAUGCAAUCGcuacuguu..aacaacaaa-............................................................................................-.....cagg........aagaUGCaccaaACUUC.U.C....-.-.-..UAA..C.G...C.....UA...UGG...CUGA.....AGCAUU.CA..A..A.GC..AG.C...U...A...A.AG................................................................................................GCG.AGUAAUcgucu............................................................gagcaCU-.U..A..A...AUCAG.G..G.CGGC..UA.CG.................................................................GCC.G.CCC.UU
   NZ_CP095443.1     GAAGCUAAAUACACGGGUGUUGAC.C.GU....AAA...AACCGUG.UA.AU..CAACCUGUCUGUUCGUGCAAA.................................................................................................AGAC.G.AAGCUG...A..UGAAAAAGACGCUAUCGcuacugug...aacaagca-............................................................................................-.....agaag......auacuAGC.....--UUU.G.G....U.A.A..CAA..C.G...C.....AA...UGG...CUGA.....AGCUUU.CA..A..A.GC..AG.C...U...A...A.AG................................................................................................GCG.AAUAAU......................................................................---.-..U..A...AGGUG.G..G.GGCA..CG.AA.................................................a.............guUGC.C.CCU.UC
   NZ_CP095733.1     GAAGCUAAAUUCACUGGAAUGUCC.C.GC....AAG...GAUCGCA.CG.CU..GACUUUGUCGAUCAAAGCGAA.................................................................................................AGAU.G.AUCAAG...A..AGAAUCUGAAGCAGUGAaag............agua-............................................................................................-.....cag..........caaUGU.....U-AGU.U.C....C.G.G..CAA..U.AccaC.....UU...UAG...GUGA.....U-UUGC.UG..A..A.AG..AA.C...A...A...A.UG...........aaucagaa....................................................................agacaguua---.------auc...............................................................ugauCAU.U..G..A...UUAAG.C..A.UCCG..GU.GG.................................................ua...........agcCGG.A.UGC.UU
   NZ_CP096142.1     GAAGCCAAGUUCGUGGGCAUGGAC.C.GU....AAG...GGCCGGA.CC.CU.gCAGC-UGUCGAUCAAGGCCAA.................................................................................................GGAC.G.AUGCUG...A..AAUGCGCGAAACGUUGGagga...........cuac-cag.....................................................................................uccg-.....ccu..........ccgCGUc..ggGCGGC.A.UgacuC.A.G..CUG..G.G...C.....--...GCG...CUGC.....UGCGUG.CA..C..A.GU..UG.-...-...-...-.--...........aacaacaacaagucc.......................................................gaguaagcgcguagc---.------gcucgc.........................................................aagagcgUGA.U..G..G...AUCGG.C..C.CGGG..CU.UG.................................................................CUC.G.GGC.CG
   NZ_CP096199.1     GAAGCUAAGUUCACAGGUGUAGAC.C.GU....AAG...AACCGCG.UA.AU..CAACCUAUCUAUCAAAGCUAA.................................................................................................AGAC.G.AAGCUG...A..AGAGCAAGAAGCAAUGGcuucacu.....gaacaaa-............................................................................................-.....gcag........acgaUGC.....UUCAU.U.-....C.G.G..UAA..C.G...C.....UA...UGG...CUGA.....CGCUUU.CA..A..A.GC..AG.C...U...A...A.AG................................................................................................GCG.AGUAAUuuau.............................................................ucgcuUUU.A..A..G...AAAAA.G..G.AGCC..GC.AA.................................................................GGC.U.CCU.UU
   NZ_CP097108.1     GAAGCCAAGAUCAUCAGCGUUGAC.C.GC....AAG...AGCCGCG.UA.AU..CCAGCUCUCCAUCAAGUCGAA.................................................................................................AGAC.G.AUGCUG...A..AGAGAAAGAAGCAAUCCaga.............gcc-ugcgcgac...........................................................................aagccugcu-.....gcug........acauUGC....uGCUGG.U.C....C.U.A..CCA..C.U...C.....--...UGG...GCGA.....-CCUGU.UG..C..G.--..UG.C...A...C...A.AA................................................................................................UGG.--AAA-aacagaacuga...............................................guucugucagacCAU.A..G..A...AAAAG.G..G.CGAC..UU.CG.................................................................GUC.G.CCC.UU
   NZ_CP098455.1     GAGGUGAAAAUCAUCAGCGUUGAU.C.GC....AAA...AACCGUG.GC.CU..GAGUCUGUCGGUUAAAGCCAA.................................................................................................GGAC.A.UGGAUG...A..CGAGAAAGAGGCGGUGAa.................a-............................................................................................-.....gcg..........cugCGUg..ag----A.A.C....-.C.A..AAA..C.G...A.....AG...CUG...CUGC.....CACCAC.CA..U..U.--..GG.C...G...-...-.--...........accugaucaaggcg........................................................caaauggagaacaag--G.ACUAAU......................................................................GUC.C..U..U...UUGCG.G..G.CGUC..AG.UG.................................................g.............auGGC.G.CCC.GU
   NZ_CP099598.1     GAAGCCAAGAUCAUCAGCGUUGAU.C.GC....AAG...AGCCGCG.UA.AU..CCAGCUCUCGAUCAAGUCGAA.................................................................................................AGAC.G.ACGCUG...A..AGAGAAAGAAGCCAUCCagag..........ccuga-aag.....................................................................................cagc-.....ucc.........ggaaGGC....gAAGCA.G.C....U.G.A..CAC..C.A...C.....UA...UGG...CGGCa...cUGCUGC.GU..C..A.--..AG.C...A...A...U.GG...........ccaaacaga...................................................................acugaguuc---.------ugc...............................................................uugaUCA.U..U..A...AAAAG.G..G.CGAC..UU.CG.................................................................GUC.G.CCC.UU
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   NZ_LR215729.2     GAAGCCAAGAUCAUCAGCGUUGAU.C.GU....AAG...AGCCGCG.UA.AU..CAGCUUGUCGAUCAAGUCGAA.................................................................................................AGAC.G.UUGAAG...A..CGAAAAAGAAGCAAUCAaag.............aaa-ugcgcac.............................................................................caagcagg-.....acg.........aagcUGCuc.cuGCUGG.U.C....C.G.A..CCA..C.-...C.....AU...CGG...-UGA.....-----U.CU..G..A.UC..CG.C...G...C...A.CA................................................................................................AAU.GGAAA-accagaacuaa...............................................guucagguagacCAU.A..G..A...AAAAG.G..G.CGAC..UU.CG.................................................................GUC.G.CCC.UU
   NZ_LR217713.1     ACAGCUAAGUUUAAUGGUGCAGAU.C.GU....AAA...AAUCGUA.UA.GU..GAAUCUAUCAUCUCGCUCCAA.................................................................................................GGAU.A.AAAUAG...A..UGAACGAGAUAAUAGCA..................a-ucuugucagcaaa..................................................................gagaaagagcagg-.....aa...........gguAGU....aACUUU.U.C....U.A.A..-UG..U.-...-.....CA...UGG...CUGA.....GGCCUU.UA..A..A.GC..UG.C...A...C...A.AA................................................................................................GUG.AAUAAAauuaguuuaua................................................cgguguuguuuUUA.G..C..A...AGAAA.G..U.UGAG..UU.AU.................................................................CAC.A.AUU.AU
   NZ_LR699007.1     GAAGCUAAAUACACUGGUGUUGAU.C.GU....AAA...AACCGUG.UA.AU..CAACCUGUCUGUACGUGCAAA.................................................................................................AGAC.G.AAGCGG...A..UGAAAAAGACGCUAUCGcuacugu.....gaacaag-............................................................................................-.....cagg........aagaAGCu...gGCUUC.U.C....U.A.A..CAA..C.G...C.....AA...UGG...CAGA.....AGCUUU.CA..A..A.GC..AG.C...U...A...A.AG................................................................................................GCG.AGUAAUua..................................................................ag---.C..A..G...CAGCA.G..G.CCGC..GC.AA.................................................................GCG.G.UCU.GC
   NZ_LR861803.1     GAAGCCAAGUUCGUGGGCAUGGAC.C.GC....AAG...GGCCGCA.CC.CU..GCAGCUGUCGAUCAAGGCCAA.................................................................................................GGAC.G.AUGCCG...A..AAUGCGCGAAACGCUGGagga...........auac-cag.....................................................................................uccu-.....ccg..........cugCGUc..ggGCGGC.A.U....G.A.-..CUC..A.G...C.....--...UGG...GCGC.....-GCUGC.UG..C..G.--..UG.C...A...C...A.G-...........uugaacagcaacaagu....................................................ccgaguaagcgcguagc---.------gcucgc.........................................................aagagcgUGA.U..G..G...AUCGG.C..C.CGGG..CU.UG.................................................................CCC.G.GGC.CG
   NZ_LR884459.1     GAAGCGAAAAUCAUCAGCGUUGAU.C.GU....AAA...UCACGUA.AC.AU..CAGCCUGUCUAUCAAAGCGAA.................................................................................................AGAC.G.AAGCUG...A..AGAGCGUCAAGCGAUCAa.................a-gagcuagguagcacgacuac....................................................uaccgcugcugcugguacug-....................aAGCa...cAA---.-.C....C.G.A..AAA..C.-...-.....UA...UCG...GUGA.....CUUGAU.CA..A..A.G-..AG.C...A...A...A.UG...........caguaaauaaaacuuua..................................................gcgcuuauuaauccuuag--G.GUUAAUagcag............................................................cacuaAAC.C..A..A...AAGGG.A..G.UGAC..UU.CG.................................................................GUC.G.CUC.CC
   NZ_LR890047.1     AAAGCAAAAUUAACCGGAGUAGAU.C.GC....AAG...AAUCGUA.UU.CU..AAUUCUUUCUGUUCGUGCUAC.................................................................................................AGAA.G.AAGCUG...A..UGAUAAAGAUGCAAUAAccgcugu....uaacauca-aaca...................................................................................agaag-.....agg..........auaUACu..aaGCUUU.U.C....-.-.-..UAA..C.G...U.....UA...UGA...CUGA.....GGCAUU.UA..A..A.GC..UG.C...U...A...A.GG................................................................................................UUG.AAUGAUc...................................................................auUUC.A..U..U...AUU--.-..-.----..--.--.................................................................---.-.---.--
   NZ_LR990739.1     GAAGCCAAGUUCGUGGGCAUGGAC.C.GU....AAG...GGCCGCA.CC.CU..GCAACUGUCGAUCAAGGCCAA.................................................................................................GGAC.G.AUGCCG...A..AAUGCGCGAAACGAUGGagga...........guac-caguc..................................................................................cucuu-.....ccg..........cagCGUc..ggGCGGC.A.U....G.A.-..CUC..A.G...C.....--...UGG...GCGC.....-GCUGC.UG..C..G.--..UG.C...A...C...A.G-...........uugaacagcaacaagu....................................................ccgaguaagcgcguagc---.------gcucgc.........................................................aagagcgUGA.U..G..G...AUCGG.C..C.CGGG..CU.UG................................................................cCCC.G.GGC.CG
   NZ_LS483250.1     GAAGCUAAAUAUGUUGGUGUUGAU.C.GU....AAA...AACCGCG.UA.AU..UAGUCUUUCAAUCAAAGCUAA.................................................................................................AGAU.G.AAGCUG...A..CGAGAAAGAAGCAAUGGcuagugu....aaacagcc-............................................................................................-.....aacc.......acaag--A....gUCUGG.U.C....U.U.U..C--..U.G...C.....UA...UGG...AAGA.....AGCAUU.UA..A..A.GC..UG.C...U...A...A.AG................................................................................................GCA.AAUAAU......................................................................--U.A..G..C...CUGAG.G..G.AUGU..UU.AU.................................................................UCA.U.CCC.UC
   NZ_LS483377.1     GAAGCCAAGUUCGUGGGCAUGGAC.C.GC....AAG...GGCCGCA.CC.CU..GCAGCUGUCGAUCAAGGCCAA.................................................................................................GGAC.G.ACGCGG...A..AAUGCGCGAAGUGCUGGag..............gaa-uaccagu.............................................................................ccucuucg-.....gcu..........ucc---....aGCGGC.A.C....C.A.C..CCA..-.G...C.....UG...GGC...GCGC.....UGCUGC.GU..G..C.AC..AG.C...U...G...A.AC...........ggcaac.........................................................................aagucc--G.AGUAAUcggccuuacgc................................................uguuuguuguuUCC.U..G..G...ACGGC.C..C.GGGC..UU.CU.................................................................GCC.C.GGG.CC
   NZ_LS483422.1     GAAGCUAAAUACACAGGUGUUGAU.C.GU....AAA...AACCGUG.UA.AU..CAACCUGUCUGUUCGCGCGAA.................................................................................................AGAU.G.AAGCUG...A..CGAAAAAGAUGCUGUCGcuacugu....gaacaaac-............................................................................................-.....aagaa......gauucUGU.....AUUCG.-.G....C.A.A..CAG..U.G...C.....UA...UGG...CUGA.....AGCUUU.CA..A..A.GC..AG.C...U...A...A.AG................................................................................................GCG.AAUAAU......................................................................U--.A..A..G...UAUCG.G..G.GUAA..CU.UG.................................................................UUA.C.CCC.--
   NZ_LS483429.1     GAAGCGAAAUACACUGGAGUAGAU.C.GU....AAA...UCUCGUA.UU.GU..UCACUUAUCAGUGAAAGCAAA.................................................................................................AGAU.C.AAGCUG...A..AGAAGCUGCGGCAGUUGcaagugu....aaauaaca-a.........................................................................................ac-.....aagaa......gauauUGU.....--UAU.U.C....C.A.A..--A..U.G...C.....AA...UGG...CUGA.....AGCAUU.UA..A..A.GC..AG.C...U...A...A.AG................................................................................................GUG.AAUAAUuaau.............................................................ucacg---.U..A..A...UAAGG.C..U.GGGC..UG.AU.................................................................GUC.C.AGC.CU
   NZ_LS483443.1     GAAGCAAAAUACACUGGUGUAGAU.C.GU....AAA...GCUCGUA.UU.GU..UCACUUAUCUGUUCGUGCGAA.................................................................................................AGAU.C.AAGCUG...A..AGAAGCAGCUGCAGUUGcaacugu....gaauaagc-............................................................................................-.....aag.........aagaUGU....uGCUAU.U.C....C.A.A..--A..U.G...C.....AA...UGG...CUGA.....AGCUUU.CA..A..A.GC..AG.C...A...A...A.AG................................................................................................GUG.AAUAAUucgc..............................................................uuugUUA.A..U..A...AAACC.G..G.CAUA..GU.AA.................................................................UAU.G.CCG.GU
   NZ_LS483458.1     GAAGCUAAAUACACUGGUGUAGAU.C.GU....AAA...UCUCGUA.UC.GU..UCACUUAUCAGUGAAAGCAAA.................................................................................................AGAU.C.AAGCUG...A..AGAAGCUGCUGCAGUUGcaaaugug..aauaacaaa-............................................................................................-.....caaga.....agaaguUGC.....--UAU.U.C....C.A.A..--A..C.G...C.....AA...UGG...CUGA.....AGCAUU.UA..A..A.GC..AG.C...U...A...A.AG................................................................................................GUG.AAUAAUuaau.............................................................ucacg---.U..A..A...UAAGG.C..U.GGGC..UA.AU.................................................................GUC.C.AGC.CU
   NZ_LS483470.1     GAAGCCAAGUUUACCGGCGUUGAC.C.GU....AAG...AACCGUG.UA.AU..CAGCCUGUCUGUUCGUGCUAA.................................................................................................AGAC.G.AAGCCG...A..UGAGAAAGAAGCCGUUGcuacuguu...aacaacaa-cagc....................................................................................aagc-.....agga........agaaGGC....gGAUUC.U.C....-.-.-..UAA..C.G...C.....AA...UGG...CUGA.....AGCAUU.UA..A..A.GC..GG.C...U...A...A.AG................................................................................................GCG.AAUAA-......................................................................---.U..G..G...CGAGG.G..G.CGGC..UU.--.................................................................GCC.G.CCC.CU
   NZ_LS999205.1     GAAGCCAAGAUCAUCAGCGUUGAC.C.GU....AAG...AGCCGUG.UA.AU..CCAGCUCUCGAUCAAGUCGAA.................................................................................................AGAC.G.UUGAAG...A..CGAGAAAGAAGCUAUCCag...............ag-ccugcgcgaca.....................................................................agccagcugcuu-.....cgg.........auauCGC....uGCUGG.U.C....C.U.A..CCA..C.U...C.....--...UGG...GUGA.....-CCUGC.UG..C..G.--..UG.C...A...C...A.AA................................................................................................--U.GGAAAAgcagaacuaa.................................................guucugucaga-CC.A..U..A...AAAAG.G..G.CGAC..UU.CG.................................................................GUC.G.CCC.UU
   NZ_LT594522.1     GAAGUAAAAUUGAUUGGUAUCGAU.C.GA....AAG...AAUAGAG.UU.AU..CAGUCUA----UCAA------......................................................................c..........................---U.G.AAGUUG...A..UAAGAAAAAAAACAUCAguaa...........aaaa-............................................................................................-.....caa..........gaaGAA.....AAUUU.U.U....C.A.A..--A..U.G...C.....AA...UGA...CUGA.....AGCUUU.UA..A..A.GC..AG.C...UacuA...A.AA................................................................................................GUU.AAUAAUaacuuaagcua...............................................auucuauguagu---.-..-..-...-----.-..-.--GC..UU.CA.................................................auag........gaguGCA.C.UCC.A-
   NZ_LT605585.1     GACGCCCGCGUCAUCGCCUUCGAC.A.AG....AAG...ACCCGCA.AG.UU.gCAGG-UUUCGAUCAAGGCACU.................................................................................................CGAA.A.UCGCUG...A..AGAAAAGGAAGCAGUCGcucaguacg.guucguccg-acuc....................................................................................cggc-.....gcuu.......cgcucGGCg...aUAUUC.U.C....-.G.G..CGC..U.G...C.....CC...UGA...-AGA.....AGCAGG.AA..A..A.GA..A-.-...-...-...-.--................................................................................................-CU.GAUAUUuuccgcu.......................................................ucgacugaACA.U..G..G...AAAAG.C..C.CGCC..AU.UC.................................................................GGC.G.GGC.UU
   NZ_LT615228.1     ACUGCCAUGAUCAUUAAUAUUGAU.C.GU....AAG...UCACGCG.CA.AU..UAAUCUUUCAAUCAAAGCAAA.................................................................................................AGAU.A.GCUCUG...A..UCAACAAGAUGCAAUGAgcaag.........cucca-............................................................................................-.....agg..........ugaUGCg...cAGUC-.U.G....G.C.A..CAA..C.C...A.....AU...U--...UGGG.....UGCUUU.GU..U..A.AA..GG.C...A...A...A.AU................................................................................................-UG.GAUAAUcaag.............................................................gcuaa--A.U..C..A...AUAUC.G..C.CACC..CU.CU.................................................uuu.........ugagGGU.G.GCG.GU
   NZ_LT615367.1     GAAGCCAAAUACACUGGCGUUGAU.C.GU....AAG...AACCGCG.UA.GU..UAGCCUGUCCAUCCGUGCUAA.................................................................................................GGAU.G.AAGCUG...A..CGAGAAAGAUGCUAUCGcuucuguu..aauaacaaa-............................................................................................-.....ccgg.......aagaaAGC....aAUUUC.U.C....-.-.-..UAA..C.G...C.....GA...UGG...CUGA.....AGCGUU.CA..A..A.GC..CG.C...U...A...A.AG................................................................................................GCG.AGUAAUgacgguggggugggcag...................................uaaugguugguuauuuuc---.-..-..-...-----.-..-.----..--.--.................................................................UGC.U.CAG.CC
   NZ_LT853882.1     GAAGCCAAGUUCGUGGGCAUGGAC.C.GU....AAG...GGCCGCA.CC.CU..GCAGCUGUCGAUCAAGGCCAA.................................................................................................GGAC.G.ACGCCG...A..AAUGCGCGAAACACUGGa.................g-gaauaccaguccuc...............................................................cgccgcauccggugg-.....................---.....CAUGA.C.U....C.A.G..UUG..G.G...C.....--...GCG...UUGC.....UGCGUG.CA..C..A.GU..UG.A...A...-...-.--...........cagcaacaaguccg.........................................................aguaagcgcguagc---.------gcucgc.........................................................aagagcgUGA.U..G..G...AUCGG.C..C.CGGG..CU.UG.................................................................CCC.G.GGC.CG
   NZ_LT855380.1     GAAGCCAAGAUCAUCAGCGUUGAC.C.GC....AAG...AGCCGCG.UA.AU..CAGCUUGUCCAUCAAGUCGAA.................................................................................................AGAC.G.UUGAAG...A..CGAGAAAGAAGCCAUUCag...............ag-ccugcguagc.......................................................................aagccugaaac-.....agc.........ugaaAGC.....ACUGG.U.C....C.U.A..CCA..C.-...-.....UA...UUG...GUGA.....-CCUGC.UG..C..G.--..UG.C...G...C...A.GA................................................................................................--U.GGAAAAacagaacuga.................................................guucuguuugaCCA.U..U..A...AAAAG.G..G.CGAC..UU.CG.................................................................GUC.G.CCC.UU
   NZ_LT897836.1     GAGGCAAAACUCACUGGCAUCGAU.C.GC....AAA...AAUUGCA.UU.GU..UAACUUAUCUGUGCGUGCCAG.................................................................................................GGAU.G.AGGAUA...A..UGAAAAAAAAGCUAACAa................ua-ucaugaaaa..........................................................................auaagcaag-.....aaga........ugggAGC.....GU---.-.-....U.U.A..CAA..C.G...C.....UA...UGA...CUGA.....AGCCUU.UA..A..A.GC..AG.C...A...AccaA.AG................................................................................................GAG.AGUAAUaaua.............................................................acugg-UU.U..G..-...-----.-..-.----..--.--.................................................................---.-.---.--
   NZ_LT906442.1     GAAGCGAAAAUCACCAAUAUCGAU.A.AG....AAA...AAUCGUA.CA.AU..CACUUUAUCUGUAAAAGCCAA.................................................................................................AGAU.G.CACAUG...A..UGAAGCUGAAGCGAUUAaaaa..........guauu-............................................................................................-.....cua.........gaacAGAa...gUUGCU.U.C....-.A.A..CGA..C.G...U.....U-...-AG...GUGA.....UUUAUU.A-..A..A.GG..AA.A...A...A...A.UG................................................................................................GCA.AGUAAAgaaggcgaguagucuuuuauugcucaug..............cuagaaguguauugguaucaauacacuuCUA.G..U..U...AAAAG.C..G.UAGA..UA.AA.................................................................UCU.A.CGC.UU
   NZ_LT906448.1     GAAGCGAAAUACACUGGUGUGGAU.C.GU....AAA...GCUCGUA.UC.GU..UCAUUUAUCUGUACGUGCAAA.................................................................................................AGAC.C.AAGCUG...A..AGAAGCUGCAGCAGUUGcaaaugug..aauaacaaa-............................................................................................-.....caaga.....agaaguUGC.....--UAU.U.C....C.A.A..--A..C.G...C.....AA...UGG...CUGA.....AGCUUU.CA..A..A.GC..AG.C...U...A...A.AG................................................................................................GUG.AAUAAUuaaguu.........................................................cccuuaaUAA.A..A..U...CGGCU.A..G.CGUG..AG.AA.................................................a..............uCAC.G.CUA.GC
   NZ_LT906451.1     GAGGCCAAGAUUAUCAAUAUUGAU.A.AG....AAA...AAUCGCA.CA.AU..AGCACUUUCGGUGAAAGCUAA.................................................................................................AGAU.G.CUCAAG...A..UCAGGCCGAAGCAAUCAa.................g-aaauacucucgcagugga........................................................gaaguugcuucaaccaca-.....uu...........aggUGA....uUUGC-.U.-....C.A.A..AGA..A.A...A.....AA...UGG...CAAG.....------.CA..A..A.GA..AG.-...-...-...-.--................................................................................................GCG.AAUAAUuuuc.............................................................uucucUUU.C..A..A...AAAAG.C..G.UAGU..UA.A-.................................................................ACU.A.CGC.UU
   NZ_LT906463.1     GAAGCCAAAUAUACUGGUGUAGAU.C.GU....AAA...GCUCGUA.UC.GU..UCACUUAUCUGUUAAAGCGAA.................................................................................................AGAU.C.AGGCUG...A..AGAAGCUGCUGCAGUUGcaaguguu..aacaacaag-............................................................................................-.....caaga.....ggaaguUGC.....--UAU.U.C....C.-.-..UAA..C.G...C.....UA...UGG...CUGA.....AGCAUU.CA..A..A.GC..AG.C...U...A...A.AG................................................................................................GCG.AAUAAUuu..................................................................acU--.U..U..U...AUGGC.U..G.AGUC..GG.UG.................................................u..............aGGC.U.CAG.CC
   NZ_LT906479.1     GAAGCUAAAUUCACCGGCGUUGAC.C.GU....AAG...AACCGCG.UU.GU..AAGCCUGUCCGUACGUGCUAA.................................................................................................GGAC.G.AAGCUG...A..CGAGAAAGACGCCAUCGcuacuguu..aacaacaaa-............................................................................................-.....cagg.......aagaaGGC....aACUUC.U.C....-.-.-..UAA..C.G...C.....AA...UGG...CUGA.....AGCUUU.CA..A..A.GC..GG.C...U...A...A.AG................................................................................................GCG.AGUAA-......................................................................---.U..G..A...CGGGG.G..G.CGGU..UCcUG.................................................................ACC.G.CCC.CG
   NZ_OU015430.1     GAGGCCCGCUUCAUCGGCAUGGAC.C.GC....AAG...GGCCGCA.CG.AU..GCAGCUGUCGAUCAAGGCGAA.................................................................................................GGAC.G.AGGCGG...A..AAUGCAGGAGGCCGUGGccgacuac..aaccgcucc-gccg....................................................................................cuuc-.....ggcc.......gaggcGGCc...aGUGGC.A.-....C.C.A..CCA..A.G...C.....--...UGG...GUGCc...cUGCUGC.GC..G..A.GC..AG.C...U...C...A.AC...........agcaaguccgaguaaucggucc........................................cgcugcgugaugcaugccgcaucGCU.GU----.....................................................................aACA.G..G..G...AACGG.C..C.CGGC..UC.CG.................................................................GCC.G.GGC.CG
   NZ_OU015521.1     GCAGUUAAAAUUAUCAAUGUGGAU.C.GU....AAA...AACCGUC.UC.AU..UCAAGUAUCUCACAAAGC---uguagaa........................................................gggcgugc..........................AGAU.A.AGGGGA...G..----UCGGAUGGUAUCUg.................a-............................................................................................-.....u.............guACC....aACU--.-.A....A.A.A..CCA..C.U...U.....--...UGG...GUGA.....-CCUCC.UG..A..A.AG..AA.C...A...A...A.UG................................................................................................CAG.AAUAAGcaagaagaauaag...........................................auaagucuuguaaaUUC.U..-..-...-----.-..-.----..--.--.................................................................---.-.---.--
   NZ_OU594967.1     AACGCUAAAUUUGUUGGUGUAGAC.C.GU....AAA...AACCGUA.CC.AU..UAGCCUGUCUAUCCGUGCGAA.................................................................................................AGAC.G.AAGCUG...A..UGAAAAAGAAGCAAUGGcuagccu....gaaugcgc-............................................................................................-.....agg.........augaUGC....g-CAGA.U.U....-.G.G..UAA..U.G...C.....UA...UGG...CCGA.....AGCGUU.UA..A..A.GC..AG.CcgcA...A...A.AG................................................................................................GCG.AAUAAAc....................................................................gUGA.A..A..A...UUCAG.G..G.GGAU..CU.UG................................................................gAUCuC.CCC.UG
   NZ_OU912926.1     AAGGCUGUGAUUAUUCACGUUGAU.C.GC....AAG...AACCGCG.GC.AU..UAAUUUGUCAAUCAAGGCGUU.................................................................................................GGAC.A.AAGCUG...A..UGAAUCUGUAGUAAUACa................aa-aagcugccuca......................................................................ccugcuguaga-.....uaau.......acaucU--.....ACGGC.U.G....G.A.A..CGA..C.-...-.....--...CAA...CUUGg...gUGCCUU.GC..U..C.AA..GG.C...U...A...A.GA...........uggacaccagcaagauug................................................acgcacaauaaggagugau---.------aaggaugaccc................................................guucugaucuuAUC.G..C..A...AAGUUgG..C.GGAG..CG.UU.................................................................AUC.C.GCA.AC


   Structure         ((((((....((((((((((((................................((((.(((((............................................................................................................)))).)...)))).......(((((....(((..........................................................................................................................................))).......))).).)...........)))..).)...)..........)))....))).....))))))..........((.....................................................................................................................))(.((..........................................................................))).............(((.(..(.((((........................................................................))).).))).))


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cmk-rpsA-ihfB



Position: 2348-2517, Conformation: #0







97% 90% 75% 50% Nucleotide present N N N Nucleotide identify E < 0.1 Base-pair covariation E < 0.05 Helix-level covariation 97% 90% 75%

G A R G C A R R U Y A Y R R Y R U G A Y C G Y A A R R Y C G Y R R U Y Y U R U C R U Y A A R G C A A R G A Y R G G A G A R G A G C R U R G R Y R Y R R Y G C Y R R R R 5'