accB-accC



Position: 70-229, Conformation: #0







DMS reactivity > 1.0 0.0 0.4 0.7 G/U/No data
Position: 0 (position.label in template: 0.5')5' Position: 1 (position.label in template: 1.U) Reactivity: nanU Position: 2 (position.label in template: 2.U) Reactivity: nanU Position: 3 (position.label in template: 3.U) Reactivity: nanU Position: 4 (position.label in template: 4.U) Reactivity: nanU Position: 5 (position.label in template: 5.U) Reactivity: nanU Position: 6 (position.label in template: 6.G) Reactivity: nanG Position: 7 (position.label in template: 7.C) Reactivity: nanC Position: 8 (position.label in template: 8.G) Reactivity: nanG Position: 9 (position.label in template: 9.C) Reactivity: nanC Position: 10 (position.label in template: 10.U) Reactivity: nanU Position: 11 (position.label in template: 11.G) Reactivity: nanG Position: 12 (position.label in template: 12.C) Reactivity: nanC Position: 13 (position.label in template: 13.G) Reactivity: nanG Position: 14 (position.label in template: 14.G) Reactivity: nanG Position: 15 (position.label in template: 15.A) Reactivity: nanA Position: 16 (position.label in template: 16.A) Reactivity: nanA Position: 17 (position.label in template: 17.A) Reactivity: nanA Position: 18 (position.label in template: 18.A) Reactivity: nanA Position: 19 (position.label in template: 19.G) Reactivity: nanG Position: 20 (position.label in template: 20.G) Reactivity: nanG Position: 21 (position.label in template: 21.U) Reactivity: nanU Position: 22 (position.label in template: 22.G) Reactivity: nanG Position: 23 (position.label in template: 23.A) Reactivity: nanA Position: 24 (position.label in template: 24.C) Reactivity: nanC Position: 25 (position.label in template: 25.A) Reactivity: nanA Position: 26 (position.label in template: 26.U) Reactivity: nanU Position: 27 (position.label in template: 27.U) Reactivity: nanU Position: 28 (position.label in template: 28.G) Reactivity: nanG Position: 29 (position.label in template: 29.G) Reactivity: nanG Position: 30 (position.label in template: 30.C) Reactivity: nanC Position: 31 (position.label in template: 31.G) Reactivity: nanG Position: 32 (position.label in template: 32.C) Reactivity: nanC Position: 33 (position.label in template: 33.A) Reactivity: nanA Position: 34 (position.label in template: 34.A) Reactivity: nanA Position: 35 (position.label in template: 35.C) Reactivity: nanC Position: 36 (position.label in template: 36.G) Reactivity: nanG Position: 37 (position.label in template: 37.A) Reactivity: 0.5A Position: 38 (position.label in template: 38.A) Reactivity: 1A Position: 39 (position.label in template: 39.G) Reactivity: nanG Position: 40 (position.label in template: 40.G) Reactivity: nanG Position: 41 (position.label in template: 41.U) Reactivity: nanU Position: 42 (position.label in template: 42.A) Reactivity: 0A Position: 43 (position.label in template: 43.U) Reactivity: nanU Position: 44 (position.label in template: 44.A) Reactivity: 0A Position: 45 (position.label in template: 45.U) Reactivity: nanU Position: 46 (position.label in template: 46.U) Reactivity: nanU Position: 47 (position.label in template: 47.U) Reactivity: nanU Position: 48 (position.label in template: 48.U) Reactivity: nanU Position: 49 (position.label in template: 49.G) Reactivity: nanG Position: 50 (position.label in template: 50.U) Reactivity: nanU Position: 51 (position.label in template: 51.U) Reactivity: nanU Position: 52 (position.label in template: 52.U) Reactivity: nanU Position: 53 (position.label in template: 53.U) Reactivity: nanU Position: 54 (position.label in template: 54.U) Reactivity: nanU Position: 55 (position.label in template: 55.U) Reactivity: nanU Position: 56 (position.label in template: 56.G) Reactivity: nanG Position: 57 (position.label in template: 57.C) Reactivity: 0C Position: 58 (position.label in template: 58.C) Reactivity: 0C Position: 59 (position.label in template: 59.G) Reactivity: nanG Position: 60 (position.label in template: 60.G) Reactivity: nanG Position: 61 (position.label in template: 61.A) Reactivity: 0A Position: 62 (position.label in template: 62.G) Reactivity: nanG Position: 63 (position.label in template: 63.G) Reactivity: nanG Position: 64 (position.label in template: 64.A) Reactivity: 0A Position: 65 (position.label in template: 65.U) Reactivity: nanU Position: 66 (position.label in template: 66.A) Reactivity: 1A Position: 67 (position.label in template: 67.G) Reactivity: nanG Position: 68 (position.label in template: 68.C) Reactivity: 0C Position: 69 (position.label in template: 69.A) Reactivity: 0A Position: 70 (position.label in template: 70.G) Reactivity: nanG Position: 71 (position.label in template: 71.C) Reactivity: 0C Position: 72 (position.label in template: 72.A) Reactivity: 1A Position: 73 (position.label in template: 73.G) Reactivity: nanG Position: 74 (position.label in template: 74.A) Reactivity: 1A Position: 75 (position.label in template: 75.U) Reactivity: nanU Position: 76 (position.label in template: 76.C) Reactivity: 1C Position: 77 (position.label in template: 77.G) Reactivity: nanG Position: 78 (position.label in template: 78.C) Reactivity: 0C Position: 79 (position.label in template: 79.U) Reactivity: nanU Position: 80 (position.label in template: 80.G) Reactivity: nanG Position: 81 (position.label in template: 81.C) Reactivity: 0C Position: 82 (position.label in template: 82.A) Reactivity: 1A Position: 83 (position.label in template: 83.C) Reactivity: 1C Position: 84 (position.label in template: 84.A) Reactivity: 0.5A Position: 85 (position.label in template: 85.A) Reactivity: 0A Position: 86 (position.label in template: 86.U) Reactivity: nanU Position: 87 (position.label in template: 87.G) Reactivity: nanG Position: 88 (position.label in template: 88.U) Reactivity: nanU Position: 89 (position.label in template: 89.C) Reactivity: 0C Position: 90 (position.label in template: 90.C) Reactivity: 0.5C Position: 91 (position.label in template: 91.G) Reactivity: nanG Position: 92 (position.label in template: 92.U) Reactivity: nanU Position: 93 (position.label in template: 93.C) Reactivity: 0C Position: 94 (position.label in template: 94.A) Reactivity: 0.5A Position: 95 (position.label in template: 95.A) Reactivity: 0A Position: 96 (position.label in template: 96.G) Reactivity: nanG Position: 97 (position.label in template: 97.U) Reactivity: nanU Position: 98 (position.label in template: 98.C) Reactivity: 1C Position: 99 (position.label in template: 99.U) Reactivity: nanU Position: 100 (position.label in template: 100.A) Reactivity: 0A Position: 101 (position.label in template: 101.A) Reactivity: 0A Position: 102 (position.label in template: 102.C) Reactivity: 0.5C Position: 103 (position.label in template: 103.A) Reactivity: 0.5A Position: 104 (position.label in template: 104.U) Reactivity: nanU Position: 105 (position.label in template: 105.U) Reactivity: nanU Position: 106 (position.label in template: 106.G) Reactivity: nanG Position: 107 (position.label in template: 107.A) Reactivity: 0A Position: 108 (position.label in template: 108.C) Reactivity: 0C Position: 109 (position.label in template: 109.A) Reactivity: 1A Position: 110 (position.label in template: 110.C) Reactivity: 0C Position: 111 (position.label in template: 111.U) Reactivity: nanU Position: 112 (position.label in template: 112.C) Reactivity: 0C Position: 113 (position.label in template: 113.U) Reactivity: nanU Position: 114 (position.label in template: 114.G) Reactivity: nanG Position: 115 (position.label in template: 115.G) Reactivity: nanG Position: 116 (position.label in template: 116.G) Reactivity: nanG Position: 117 (position.label in template: 117.G) Reactivity: nanG Position: 118 (position.label in template: 118.C) Reactivity: 0C Position: 119 (position.label in template: 119.A) Reactivity: 0A Position: 120 (position.label in template: 120.A) Reactivity: 0A Position: 121 (position.label in template: 121.A) Reactivity: 0A Position: 122 (position.label in template: 122.A) Reactivity: 0A Position: 123 (position.label in template: 123.U) Reactivity: nanU Position: 124 (position.label in template: 124.A) Reactivity: 0A Position: 125 (position.label in template: 125.G) Reactivity: nanG Position: 126 (position.label in template: 126.A) Reactivity: 0A Position: 127 (position.label in template: 127.C) Reactivity: 0C Position: 128 (position.label in template: 128.C) Reactivity: 0C Position: 129 (position.label in template: 129.G) Reactivity: nanG Position: 130 (position.label in template: 130.G) Reactivity: nanG Position: 131 (position.label in template: 131.C) Reactivity: 0.5C Position: 132 (position.label in template: 132.G) Reactivity: nanG Position: 133 (position.label in template: 133.U) Reactivity: nanU Position: 134 (position.label in template: 134.C) Reactivity: 0C Position: 135 (position.label in template: 135.C) Reactivity: 0C Position: 136 (position.label in template: 136.C) Reactivity: 0C Position: 137 (position.label in template: 137.G) Reactivity: nanG Position: 138 (position.label in template: 138.G) Reactivity: nanG Position: 139 (position.label in template: 139.C) Reactivity: 0C Position: 140 (position.label in template: 140.C) Reactivity: 0C Position: 141 (position.label in template: 141.U) Reactivity: nanU Position: 142 (position.label in template: 142.G) Reactivity: nanG Position: 143 (position.label in template: 143.C) Reactivity: 0C Position: 144 (position.label in template: 144.U) Reactivity: nanU Position: 145 (position.label in template: 145.G) Reactivity: nanG Position: 146 (position.label in template: 146.G) Reactivity: nanG Position: 147 (position.label in template: 147.A) Reactivity: 1A Position: 148 (position.label in template: 148.A) Reactivity: 0A Position: 149 (position.label in template: 149.U) Reactivity: nanU Position: 150 (position.label in template: 150.U) Reactivity: nanU Position: 151 (position.label in template: 151.U) Reactivity: nanU Position: 152 (position.label in template: 152.A) Reactivity: 1A Position: 153 (position.label in template: 153.U) Reactivity: nanU Position: 154 (position.label in template: 154.C) Reactivity: 0C Position: 155 (position.label in template: 155.G) Reactivity: nanG Position: 156 (position.label in template: 156.C) Reactivity: 1C Position: 157 (position.label in template: 157.U) Reactivity: nanU Position: 158 (position.label in template: 158.A) Reactivity: 0A Position: 159 (position.label in template: 159.U) Reactivity: nanU Position: 160 (position.label in template: 160.G) Reactivity: nanG Position: 161 (position.label in template: 161.C) Reactivity: 1C Position: 162 (position.label in template: 162.A) Reactivity: 0.5A Position: 163 (position.label in template: 163.U) Reactivity: nanU Position: 164 (position.label in template: 164.A) Reactivity: 0.5A Position: 165 (position.label in template: 165.C) Reactivity: nanC Position: 166 (position.label in template: 166.A) Reactivity: nanA Position: 167 (position.label in template: 167.G) Reactivity: nanG Position: 168 (position.label in template: 168.C) Reactivity: nanC Position: 169 (position.label in template: 169.U) Reactivity: nanU Position: 170 (position.label in template: 170.G) Reactivity: nanG Position: 171 (position.label in template: 171.U) Reactivity: nanU Position: 172 (position.label in template: 172.C) Reactivity: nanC Position: 173 (position.label in template: 173.G) Reactivity: nanG Position: 174 (position.label in template: 174.G) Reactivity: nanG Position: 175 (position.label in template: 175.G) Reactivity: nanG Position: 176 (position.label in template: 176.G) Reactivity: nanG Position: 177 (position.label in template: 177.C) Reactivity: nanC Position: 178 (position.label in template: 178.A) Reactivity: nanA Position: 179 (position.label in template: 179.U) Reactivity: nanU Position: 180 (position.label in template: 180.A) Reactivity: nanA Position: 181 (position.label in template: 181.C) Reactivity: nanC Position: 182 (position.label in template: 182.G) Reactivity: nanG Position: 183 (position.label in template: 183.C) Reactivity: nanC Position: 184 (position.label in template: 184.U) Reactivity: nanU Position: 185 (position.label in template: 185.U) Reactivity: nanU Position: 186 (position.label in template: 186.U) Reactivity: nanU Position: 187 (position.label in template: 187.A) Reactivity: nanA Position: 188 (position.label in template: 188.C) Reactivity: nanC Position: 189 (position.label in template: 189.A) Reactivity: nanA Position: 190 (position.label in template: 190.G) Reactivity: nanG Position: 191 (position.label in template: 191.A) Reactivity: nanA Position: 192 (position.label in template: 192.C) Reactivity: nanC Position: 193 (position.label in template: 193.G) Reactivity: nanG Position: 194 (position.label in template: 194.G) Reactivity: nanG Position: 195 (position.label in template: 195.C) Reactivity: nanC Position: 196 (position.label in template: 196.G) Reactivity: nanG Position: 197 (position.label in template: 197.G) Reactivity: nanG Position: 198 (position.label in template: 198.U) Reactivity: nanU Position: 199 (position.label in template: 199.G) Reactivity: nanG Position: 200 (position.label in template: 200.A) Reactivity: nanA Position: 201 (position.label in template: 201.3')3' 10 20 30 50 100 150


accB-accC



Position: 70-229, Conformation: #0







Retained alignments:


   NC_009792.1       AGCCG.CU.GAAAGGG.UGACAA.UCGCGCAUCA.AAGGUAU.AU.UUUGUUUUUUACC.G.GAG.....A........AUCGCAGGAGAUAGCUGCACGAUGGCCGACAAAUUA.CACAuuuugcuuuuaaacgguccgaaccuuaauaugcucggcacccgugaaccugauaaguacggcacccugacauuaacggaaauuguuaaccguuugaaugcagaggccgacgcgcugaaugugacgcuggaucauuugcaguc.........................................................uaacgcggaguacgcacucaucgaccguauucaucaggcuaaagacacuguggacuauauccugauuaauccggccgcguuuacgcacaccaguguugcgauucgcgaugcgcugcucgcggugagcaucccguuuaucgagaU-.--.-U.C.ACCUG.......AGCAACGUAC....AU..GCG.C.GGgaaccguuucgccagcauuc.....................guaucuuuccgauauugcggc------------U-..........................--------------...........--ggcgucauuugcggau.......ucggcgcugacgguuacUCAUA.CGCU.UUAC.A.GACGGCGGUA
   NC_017910.1       CGCCC.GC.C---AGG.UGACAA.UCCCGAAACU.UAGGUAU.AU.UUUGUAAAUUACC.U.GAA.....A........AUCGCUGGAGAUCGCGGCACGAUGUCAGAUAAAUUU.CGCA......................................................................................................................................................................................................................................................................................................................................................UU.CU.GC.U.UU-UG.......AAUGGCCCUA....AC..CUG.A.AU..............................................................AUGCUCGGCACU--..........................CGCGAGCCAG----...........AA........................................AAAUA.CGGC.AGCC.A.GACGCUGGCA
   NC_021870.1       GUUCG.CA.GAAAGGG.UGACAA.UCGAGCAAUG.AAGGUAU.AU.UUUGUUUUUUGCC.C.GAA.....A........AUGGCAGAAGAUAGCCACAGAAUGACUGAUAAAUCA.UGCA......................................................................................................................................................................................................................................................................................................................................................UU.UCaCC.U.UCGGGc....gcUACGGCAUA-....AC..AGG.C.AAauc........................................................aga------GAUGCGCGguau..................uuuaCCCGCGGCAG----u.........cAU........................................UUACA.UGCU.UUAC.A.GACGGCGCUA
   NZ_AP019007.1     GGCCU.CU.GAAAAGG.UGACAA.UCGCGCAUCG.AAGGUAU.AU.UUUGUUUUUUACC.G.GAG.....A........AUCGCAGGAGAUAGCGGCACAAUGGCUGAUAAAUUC.CA--gaucuuaguuuugaacggaccgaaccugaacaugcucggcacccgugagccagagaaguauggcacgcugacauugagugaaauuguuaaccgucuggguacggaagccgcuucgcucaauguggauuuggacca........................................................................uuuucagucuaacgcggaguacgcacucaucgaccguauucaucaggcuaaagacaauguggacuauauccugaucaauccggccgcguuuacgcacaccaguguugcuauccgcgacgcacugcuugcggugag-U.AU.CC.C.GUUU-.......AUCGAGAUCC....AC..CUG.A.GUaacgugcacgcccgagagccguuccgccaccauuccuauuugucggauaucgccgcuggcguGAUCUGUGGUCUGG..........................GUGCAGACGGUUAU...........--........................................UCAUA.CGCU.UUAC.A.GACAGCGGUC
   NZ_AP019630.1     AGCCU.CU.GAAAAGG.UGACAU.UUGCGUUUCG.AAGGUAU.AU.UUUGUUUUUUACC.C.GAA.....A........AUCGCAGGAGAUAGCGGCAUAAUGACUGAUAAAUUC.CAUAucuuaguuuugaacggaccgaaccugaacaugcucggcacccgugagccagagaaguacggcacgcuaacauugagugaaauuguuaaccgucugggaacggaagcagcgucacugaauguggauuuggaucauuuucagucgaaugcggaguacgcacuc....................aucgaccguauucaucaggcuaaagacaauguggacuauauccugaucaauccggccgcguuuacgcacaccaguguugcuauccgcgacgcacugcucgcggugaguaucccguuuaucgagauccaccugaguaaugugcacgcccgagagccguuccgUC.AC.CA.U.UCGUAu.....c--UGUCAGAU....AU..CGC.U.GCugg........................................................cguUAUCUGUGGACUGG..........................GCGCAGACGGCUAU...........--........................................UCAUA.CGCU.UUAC.A.GACAGCGGUA
   NZ_AP022508.1     GGCCU.CU.GAAAAGG.UGACAU.UUGCGCUUCG.ACGGUAU.AU.UUUGUUUUUUACC.C.GAA.....A........AUCGCAGGAGAUAGCGGCAUAAUGACUGAUAAGUUC.CACAucuuaguuuuaaacggaccgaaccugaacaugcucggcacccgugagccagagaaguacggcacgcugacauugagcgaaauuguuaaccgucugagcacggaagcagccucgcugaauguggauuuggaucauuuucagucaaacgcggaguacgcaaucaucg...........accguauucaucaggcuaaagacacuguggacuauauccugaucaauccggccgcguuuacgcacaccaguguugcuauccgcgacgcacugcucgcggugaguaucccguuuaucgagauccaccugaguaacgugcacgcccgagagccguuccgccaccauucGU.AU.CU.G.UCGGA......uAUCG----CU....GC..UGG.C.GU..............................................................UAUCUGCGGACUGG..........................GCGCAGACGGCUAU...........--........................................UCAUA.CGCU.UUAC.A.GACAGCGGUA
   NZ_AP022547.1     GAGUC.CC.GAAAAGG.UGACAA.UCGCGCAUCG.AAGGUAU.AU.UUUGUUUUUUACC.C.GAG.....A........AUGGCAGAAGAUAGCCGCAUAUUGGCCGAUAAGUUU.CGCU......................................................................................................................................................................................................................................................................................................................................................UU.UUgCU.U.UCGAG......cAUCGGAGGCUu..aAC..CUGuC.GGcuu........................................................cug------AAGAAGCGcgg...................cgucUUGCAACAGC----ag.......uaAU........................................UCAUA.UGCU.UUAC.A.GACGGUGCUA
   NZ_AP023184.1     UGGCU.CU.GA--AGG.UGACAA.CCGAGCAACU.UAGGUAU.AU.UUUGUAAAAUACC.U.ACA.....A........AUUGCAGGAGAUGGCAGCACGAUGUCGGCUAAUUUU.CACAuuuugcuuuuga..............................................................................................................................................................................................................................................................................................................................acgguccgaaucUU.AA.CA.U.GCUGG......gUACA-CGUGA....GC..CUG.A.GA..............................................................AGUACGGCACGCUG..........................ACUUUAGCUCAAAU...........U-........................................GUUAA.CUCGcUCGA.A.GACGAAGCGA
   NZ_CP007230.1     CGUC-.GU.AAAAAGG.UGACAA.AUCGGU----.--AGCAGcAG.GUUAUUUUUUACGaU.GAUggacuA........AUUGCCGGAGAUACCAGCACAAUGUCGGAUAAGUUU.CACA......................................................................................................................................................................................................................................................................................................................................................UU.UU.GC.-.UUCUG.......AAUGGCCCUA....AC..UUG.A.AU..............................................................CUGCUUGGAACGCG..........................UGAACCAGA--AAA...........--........................................GUAUG.---G.UUAC.AcCACGCUGGC-
   NZ_CP011602.1     UAAGG.CCcAAAAAGG.UGACAA.CCACGCAAUG.ACGGUAU.AU.UUUGUUUUUUACC.G.GAA.....A........AUUGCAGGAGAUAGCAGCACGAUGGCUGGCAAGUUG.CGCAuuuugcuuuuaaacggccccaaucuuaacaugccgggagcacgcaagucggaaaccuaugg............................................................................................................................................................................................................................cacccuucgacuuuacugaguucacucaaagcaauaugcaugcgcacgaaccaucucgcca--.-U.CA.U.UCCUGgc...ucUCCGAAAUCGc..uAC..CGG.C.GU..............................................................GGUCUUCGGACCUG..........................AUGCUGGCAGUUGU...........--........................................ACAUA.CGCU.UUAC.A.GACGGCGGUA
   NZ_CP012871.1     CUCCU.CU.GAAAAGG.UGACAA.GUGCGUAUCG.AAGGUAU.AU.UUUGUUUUUUACC.G.GAG.....A........GUUGCAGGAGAUAGCUGCAUAAUGGCAGACAAGUUU.CGCAuuuugcuuuugaacggaccgaaccugaauaugcucggaacccgcgagccggagaaguacggcacccucacgcucacggaaauuguuaaccguuugacggcagaagcugacgcgcugaacgugucgcucgaccauuugcagucc........................................................aaugcugaguacgucaucaucgaccgaauucaucaggcuaaagacguuauugacuauauccugaucaauccggccgcguuuacgcacacaagcguggcgauucgugaugcgcugcuggcggugaguaucccguuuaucgagau--.--.-U.C.ACCUG.......AGCAACGUGC....AC..GCG.C.GGgagccuuuccggcaccauucaua...............ucucucugacaucgccgcuggcguCAUCUGCGGAUUAG..........................GCGCUGACGGCUAU...........--........................................UCAUA.CGCU.UUAC.A.GACGGCAGUA
   NZ_CP013940.1     GCACG.CU.GAC-GGG.UGACAA.CCAGACGAUG.AAGGUAU.AU.UUUGACAUUUACC.G.GAA.....G........AUGGCAGGAGAUAGCGCCAGGAUGACCGAGAAAUUU.CACAuuuugcuuuuaaacggcccgaaccuuaacaugcugggcacgcgugagccggagaaguacggcacgcaaacgcuugaacaaauuguuaacgaucucgccgcuguugcagagcaguugaaugucucgcucgaccaccugcaauccaacgcugaauaugcgcuuaucg...........accgaauucaucaggcuaaagacaagauugacuauauccugaucaauccggccgcguuuacgcauaccagcguggcgcugcgcgacgcgcugcugucggugaauaucccguuuaucgagauccaccugagcaaugugcacgcccgggagccuuuccggcaucauucAU.AC.C-.U.UUCGG.......---AUAUUGC...cGC..CGG.C.GU..............................................................CAUCUGCGGAUUAG..........................GUGCCGAUGGCUAU...........--........................................ACCUA.UGCG.UUAC.A.GACGGCGGUC
   NZ_CP013990.1     CAUAG.CCgGAAAGGG.UGACAA.UCGCGCAUCG.AAGGUAU.AU.UUUGUUUUUUACC.G.GAG.....A........AUCGCAGGAGAUAGCGGCACAAUGGCUGACAAGUUU.CACAucuuaguuuugaacggaccgaaccugaauaugcucggcacccgugaaccagagaaguacggcacgcugacguugaccgauauuguuaaccaauuggguaacgaagcggcggcacuuaauguggaacuugaccauuuucagucaaacgcggaguacgcacuca.................ucgaccgcauucaucaggcuaaagacacaacagacuauauccugauuaauccggccgcguuuacgcacaccaguguugcuauucgcgacgcgcugcuggccgugaguaucccguuuaucgagauccaccucagcaacgugcaugcgcgggaaccguuccgcca--.-C.CA.C.UCCUAc.....cUGUCGGAUAUcgccAC..UGG.C.GU..............................................................CAUCUGUGGACUGG..........................GGGCUGACGGUUAU...........--........................................UCAUU.CGCU.UUAC.A.GACAGCGGUA
   NZ_CP014007.2     GGACU.UU.AACAACG.UGACAA.CCACGCAACG.AAGGUAU.AU.UUUGUUUUUUACC.G.GAA.....A........AUUGCAGGAGAUAGCAGCACAAUGGCGGACAAAUUG.CGUA......................................................................................................................................................................................................................................................................................................................................................UU.-U.UG.C.UUUUG.......AACGGCCCCA....AU..CUG.A.AUaugcugg...............................................gaacccgu--------------gaaccaaaaaccuacgguucacucacCCUGCAGCAGAU--...........UG........................................UUAAC.CGUU.UAAC.A.AAUGAAGCGG
   NZ_CP014070.2     GACCG.CU.GAAAAGG.UGACAA.UCGAGCAUUG.AAGGUAU.AU.UUUGUUUUUUGCC.G.GAG.....G........AUUGCAGCAAAUCGCUGCAUGUUAACCGACAAGUCU.CACA......................................................................................................................................................................................................................................................................................................................................................-U.GA.AU.C.GUUGA.......GGCGGAAUAU....AC..CGG.C.GU..............................................................CCUGGCAGGCGCAA.........................gCCGUUUUGCCAUCG...........GG........................................ACUCA.CGCU.UUAC.A.GACAGCGCUU
   NZ_CP015581.1     UUCAU.CA.GAAUGGG.UGACAA.-------AUG.AUGGCAG.GG.AGAGUAUUUUACG.C.GAU.....GucuuuauuAUUGCAGGAGAUAGCCACACGAUGGCUGAUAACUUU.CAUA......................................................................................................................................................................................................................................................................................................................................................UU.UU.-A.G.UUCUG.......AAUGGUCCGA....AC..CUU.A.AU..............................................................UUACUGGGUACCCGugaaccgga........gaccuauggU-------------...........--cacacca..........................cauugcaGGAUA.----.UUAC.C.AGUGGAUUGA
   NZ_CP016337.1     AGCCU.CU.GAAAAGG.UGACAA.UCGCGAAUCG.AAGGUAU.AU.UUUGUUUUUUACC.C.GAG.....A........AUCGCAGGAGAUAGCGGCACAAUGGCUGACAAGUUC.CACAuauuaguuuugaacggaccgaaccugaacaugcuuggcacccgugagccggauaaguacggcacgcuuacgcuuagcgagauuguuaacgguuugagcaccgaagcggcagcgcuugauguggaacuggcgcauuuucagucaaacgcggaguacgcaauca.................ucgaccguauucaucaggcaaaagacauuauggacuuuauccugaucaauccggccgcguuuacgcacaccaguguugcuauccgcgacgcacugcuggcggucggcaucccguuuaucgagauccaccugaccaacgugcaugcgcgggagccauuccgcca--.-C.CA.C.UCGUA.......UCUGUCAGAU....AU..CGC.C.GAggg........................................................cgu------UAUUUGCGggc....................uggGCGCGGAAGGUU--...........AU........................................UCAUA.CGCU.UUAC.A.GACGGCGGUA
   NZ_CP017184.1     GGCCU.CU.GAAAAGG.UGACAU.UUGCGCUUCG.ACGGUAU.AU.UUUGUUUUUUACC.C.GAA.....A........AUCGCAGGAGAUAGCGGCAUAAUGACUGAUAAGUUC.CAGAucuuaguuuugaacggaccgaaccugaacaugcucggcacccgugagccggagaaguacggcacgcugacauuaagcgaaauuguuaaccguuugagcacggaagcagcgucgcugaauguggauuuggaucauuuucagucaaacgcggaguacgcaaucaucg...........accguauucaucaggcuaaagacaauguggacuauauccugaucaauccggccgcguuuacgcacaccaguguugcuauccgcgacgcacugcuugcggugaguaucccguuuaucgagauccaccugaguaacgugcacgcccgagagccguuccgucaccacucGU.AU.CU.G.UCGGA......uAUCG----CU....GC..UGG.C.GU..............................................................UAUCUGUGGACUGG..........................GCGCAGACGGCUAU...........--........................................UCAUA.CGCU.UUAC.A.GACAGCGGUA
   NZ_CP017279.1     GGCCU.CU.GAAAAGG.UGACAA.UCGUGCUUCG.AAGGUAU.AU.UUUGUUUUUUACC.G.GAG.....A........AUCGCAGGAGAUAGCGGCACAAUGGCUGAUAAGUUC.CAUAucuuaguuuuaaacggaccgaaccugaacaugcucggcacccgcgagccagagaaguacggcucgcuaacauugagugaaauuguuaaccgucugagcacggaagcaacgucgcugaauguggauuuggaucauuuucaguc..........................................................uaacgcggaguacgcaaucaucgaccguauucaucaggcuaaagacacuguggacuauauccugaucaauccggccgcguuuacgcacaccaguguugcuauucgcgacgcacugcucgcagugaguaucccguuuaucgag--.AU.C-.C.ACCUG.......AGCAACGUGC....AC..GCC.C.GAgagccguuccgccaccauuccua...............ucuaucagauaucgccgcuggcguU-------------..........................--------------...........--auuugcggacugg.............gcgcugacggcuauUCAUA.CGCU.UUAC.A.GACAGCGGUA
   NZ_CP020388.1     AACCA.CU.GAAAAGA.UGACAA.UCGCGUAUCG.AAGGUAU.AU.UUUGUUUUUCGCC.U.GAG.....A........GUUGCAGGAGAUAGCAGCACAAUGACCAGUAAGUUU.CGCAuuuugcuuuugaacggcccgaaccugaacaugcucggcacccgugagccagagaaguauggcacccugacguuagccgaaauuguuaacgguuuaaccgccgaggccagcgcucugaaugcgucccuggagcaucugcagucgaaugccgagcacgccaucauug...........accguauucaucaggcuaaagacagcauugacuauauccugaucaauccggccgcguucacgcacacaagcguagcgauccgugaugcccugcuggcggugaguaucccguucaucgagauacaucugagcaacgugcacgcccgcgagccguuccgccaccauucAU.AU.CU.C.UCUGA.......UAUUG---CU....GC..CGG.C.GU..............................................................CAUCUGUGGCUUAG..........................GCGCCGAUGGUUAU...........--........................................ACAUA.CGCU.UUAC.A.GACAGCGGUA
   NZ_CP023525.1     UUCGG.CUcGAAAAGG.UGACAA.CCGGAAAACU.UAGGUAU.AU.UUUGUAAAUUGCC.U.ACU.....A........AUCGCAGGAGAUGGCAGCACGAUGUCGGGUGAAUUU.CACAuuuugcuuuugaauggcccuaaucugaauaugcugggcacgcgggagccggacaaguacggucaccagacguuagcagaaauuguuaacacgcuugaagcagaagcaacaagccuuggcgugacgcucagccaccugcaaucu........................................................aacgccgaauaugcguugauugaccgaauucaucaggccaaagacucugucgacuuuauccugauuaauccggccgcguucacgcauaccagcgucgcgcugcgcgaugcguuacuggcgguggauaucccguuuaucgagauUC.AC.CU.C.-----.......AGCAAUGUGC....AC..GCG.C.GUgaaccguuucgccaucacuccua...............ucuuucagauaaggccgucggcguGAUCUGCGGAUUAG..........................GCGCUGACGGCUA-...........-U........................................UCAUA.UGCU.UUAC.A.GACGGCAGUA
   NZ_CP023706.1     UGGCA.GA.GAAAGAG.UGACAA.GGCGGCGACA.UCGGGUU.AU.UUUGGCAAAAUUC.G.UCU.....G........AUUGCCGGAGAUGGCGGCACAAUGGCCAACAAGUUC.AACA......................................................................................................................................................................................................................................................................................................................................................UU.-U.UG.-.----C.......UUCUCAAUGG....UC..CCA.A.U-..............................................................CUGAAUAUGCUGGG..........................CGUUCGUGAGCCGG...........AA........................................AAAUA.UGGU.UCCC.A.GACGCUGGCG
   NZ_CP026377.1     CGCCU.CC.AGAAAGG.UGACAAaUGGCUUCUCAcGAGGUAU.UU.UACGCG-AUGCCU.C.GAU.....U........AUUGCAGGAGAUAGCAGCAAAAUGGCGCAUGAUUUU.CAUAuucugcucuugaacggucccaaccucaaucugcuggggacgcgcgaaccggaaaaauaugggcacagcacgcugaccgggaucguugacgaucugacaucgcaggccagcgcguugaaugugaaacugagccauuug...................................................................cagucgaaugcagaacacguucugauugagcguauucacgaggcgagaggcaaugucgauuacaucgucauuaacccggcggccuuuacgcauaccagcguggcgcugcgcgaugcauugcuggcgguggauaucccu--.-U.UU.A.UCGAA.......-GUGCAUAUC....AC..CAA.C.GUacaugcccgcgagcccuuucgccaccau.....uccuggcuuucugauauugcugccggcguAAUCUGUGGACUUG..........................GCGUCGACGGUUAC...........--........................................UCCUG.GGCU.UUAC.A.AACGGCAGUA
   NZ_CP027107.1     ACACG.CC.GAC-GGG.UGACAA.CCAGACGAUG.AAGGUAU.AU.UUUGACAUUUACC.G.GAA.....G........AUGGCAGGAGAUAGCGCCAGGAUGACCGAGAAAUUU.CACAuuuugcuuuuaaacggcccgaaccuuaacaugcugggcacgcgugagccggagaaguacgguacacagacgcuugaacaaauuguuaacgagcucgccgcuguugcaaagcaguugaaugucucguucgaucaccugcaauccaacgcugaauaugcgcuuaucg...........accgaauucaucaggcuaaagacaagauugacuauauccugaucaauccggccgcguuuacgcauaccagcguggcgcugcgcgacgcgcugcugucggugaauaucccguuuaucgagauccaccugagcaaugugcacgcccgagagccuuuccggcaucauucAU.AC.C-.U.UUCGG.......---AUAUUGC...cGC..CGG.C.GU..............................................................CAUCUGCGGAUUAG..........................GUGCCGAUGGCUAU...........--........................................ACCUA.UGCG.UUAC.A.GACGGCGGUC
   NZ_CP027986.1     GGACU.CU.GAUUAGG.UGACAA.UCGCGCGUUG.AAGGUAU.AU.UUUGUUUUUUACC.C.GAG.....A........UUCGCAGGAGAUAGCGGCACAAUGGCUGAUAAAUUC.CA--gaucuuaguuuugaacggaccgaaccucaacaugcucggcacccgcgagccagagaaguauggaacgcugacauugagugaaauuguuaaucgucuggguacggaagcagcgucacugaauguggauuuggaccauuuucagucaaaugcggaguacgcacucauc.........gaccguauucaucaggcuaaagacaauguggacuauauccugaucaauccggccgcguuuacgcacaccaguguugcuauccgcgacgcacugcuggcggugaguaucccguuuaucgagauccaccucaguaacgugcacgcccgagagccguuccgccaccauucGU.AU.CU.G.UCGGA......uAUCG----CC....GC..UGG.C.GU..............................................................UAUCUGCGGACUGG..........................GCGCUGACGGUUAU...........--........................................UCAUA.CGCU.UUAC.A.GACAGCGGUA
   NZ_CP028271.1     CGCCU.UG.AUAAAGG.UGACAAaUGGCUUCUCAcAAGGUAU.UU.UACGCG-AUGCCU.C.GAU.....U........AUUGCAGGAGAUAGCAGCAAAAUGGCGCACAAUUUU.CACAuucugcuuuugaacggccccaaccucaauuuacuggggacacgugagccagaaaaguaugggcauaccacgcugaccgggaucguugacgaucugacaucgcaggccagcgcgcugaaugugaaacugagccauuug...................................................................cagucgaaugcagaacacguucugauugagcguauucacgaggcgagaggcaaugucgauuauauugucaucaauccggcggcuuuuacucauaccagcguggcgcuacgcgaugcgcugcuggcggucgauaucccuUU.--.-U.A.UCGAG......gUGCAUA--UU....AC..CAA.C.GUacacgcccgcgagccuuuucgccaccau.....uccuggcuuucugauauugcugccggcguAAUCUGUGGACUUG..........................GCGUCGACGGUUAC...........--........................................UCCUG.GGCU.UUAC.A.AACGGCAGUA
   NZ_CP032487.1     CGUCG.U-.AAAAAGG.UGACAA.AUCGGUGACA.UCA----.-G.GUUAUUUUUUACG.AuGAUguacuA........AUUGCCGGAGAUACCAGCACAAUGUCGGAUAAGUUU.CACA......................................................................................................................................................................................................................................................................................................................................................UU.UU.GC.-.UUCUG.......AAUGGCCC--....--..UAA.C.UUga..........................................................auCUGCUUGGAACGCG..........................--UGAA--------cc.......cgAA........................................AAGUA.CGG-.UUAC.-.-ACGACAUUG
   NZ_CP033744.1     AAGCG.CU.GAAAGGG.UGACAA.UCGCAUAUUG.AAGGUAU.AU.UUUGUCUUUUACC.C.GAA.....A........AUGGCAGAAGAUAGCCGCACAAUGACUAACAAGUCU.GGCA......................................................................................................................................................................................................................................................................................................................................................AU.CU.CA.U.UUAAU.......GGCAGCA-GC....AC..CCA.G.UGcagcg...................................................ccugag-----------AU-gcgugg.............caucuugUCACUCACUGUUAU...........--........................................AAAAA.UGCU.AUAC.A.GACGGCGGUA
   NZ_CP033844.1     GAGUC.CC.GAAAAGG.UGACAA.UCGCGUAUCG.AAGGUAU.AU.UUUGUUUUUUACC.C.GAG.....A........AUGGCAGAAGAUGGCCGCAUGUUGGCCGGUAAGUUU.CGCU......................................................................................................................................................................................................................................................................................................................................................UU.UUgCU.U.UCGGGc.....aGCCGGAGCGU...aAC..CU-.-.GU..............................................................CGACUUAUGCCCAAuggcg...............gcguca-----------UGAaucag.caguaAU........................................UCAUA.UGCU.UUAC.A.GACGGUGCUA
   NZ_CP036175.1     GAGUC.CC.GAAAAGG.UGACAA.UCGCACAUCG.AAGGUAU.AU.UUUGUUUUUUACC.C.GAG.....A........AUGGCAGAAGAUGGCCGCAUGAUAGCUGAUAAGUUC.CGCAuuuugcuacua...............................................................................................................................................................................................................................................................................................................................gacuaucggagcUU.AC.CU.G.UCGAC.......CUCAAAAGAG....AC.gCGG.C.GU..............................................................CUUGUUCGUAGC--..........................--------AGUAG-...........-U........................................UCAUA.UGCU.UUAC.A.GACGGUGCUA
   NZ_CP037864.1     GAGCG.UU.GAAAGGG.UGACAU.UCGCAUGUUG.AAGGUAU.AU.UUUGUCUUUUACC.C.GAA.....A........AUGGCAGAAGAUAGCCGCACAAUGACUAACAAGUCU.GGCA......................................................................................................................................................................................................................................................................................................................................................AU.CU.CA.C.UUAAU.......GGCAACC-GC....AC..CCA.G.UGcaacg...................................................ccugag-----------A--ugcgugg............caucuugUCACUCACUGUUAU...........--........................................AAAAA.UGCU.AUAC.A.GACGGCGGUA
   NZ_CP038469.1     CAGCG.CG.GAAAGGG.UGACAA.CCGGGUAUUG.AAGGUAU.AU.UUUGUCUUUUACC.C.GAA.....A........AUGGCAGAAGAUAGCCACACAAUGACUGAUAAGUUU.UGAAguc...............................................................................................................................................................................................................................................................................................................................................ucauUUaAU.GG.U.UACGG.......CACGCAGUGC...aAC..CGC.CaGA..............................................................GAUGGUGACAUCUC.........................gUCACCAACAGUCAU...........--........................................UCAAA.UGCU.AUAC.A.GACGGCGAUA
   NZ_CP040392.1     GGACU.UU.AACAACG.UGACAA.CCACGCAACG.AAGGUAU.AU.UUUGUUUUUUACC.G.GAA.....A........AUUGCAGGAGAUAGCAGCACAAUGGCGGACAAAUUG.CGUA......................................................................................................................................................................................................................................................................................................................................................UU.-U.UG.C.UUUUG.......AACGGCCCCA....AU..CUG.A.AUaugcugggaa.........................................cccgugaacca--------------aaaaccuau.......gguucgcuua-CCCUGCAGCAGAU...........UG........................................UUAAC.CGUU.UAAC.A.AAUGAAGCGG
   NZ_CP041247.1     GGGCC.CU.GAAAAGG.UGACAA.GCGCGCUUCG.AAGGUAU.AU.UUUGUUUUUUACC.C.GAG.....A........AUGGCAGGAGAUAGCCACACAAUGGCUGACAAGUUU.CGCAuuuugcuuuuaaacggacccaaucuuaacaugcucggcacccgugagccugagaaguauggcacccuuaagcuuucugagauuguuaaccgucugcaaucagaagcuucggcucugaacguggcgcuggaucaccugcaguccaaugcggaguucgcgcucaucgaccgaauucaucaggcuaaagacacuguagacuauauccugauuaauccggccgcguuuacgcacacuagcguggcuauccgcgaugcauugcuugcggucaguaucccguuuaucgagauucaccugagcaacguacaugcacgcgaaccguuccgucaccacuccuaucugucggAU.AU.CGcC.UCGGG.......CGU------C....AU..CUG.C.GG..............................................................A---------CUCG..........................GUGCGGACGGCUAU...........--........................................UCAUA.CGCU.UUAC.A.GACGGCGGUA
   NZ_CP041925.1     GAACC.CU.GAAAAGG.UGACAA.GCGCGUAUCG.AAGGUAU.AU.UUUGUUUUUUACC.C.GAG.....G........UUAGCAGGAGAUAGCUGCACAAUGGCUGACAAGUUU.CGCAuuuugcuuuugaacggaccaaaccuuaauaugcucggcagccgugaacccgagaaguaugguucgcuaacgcuggcagaaauuguuaaccguuuaaccgcagaagcggaagcgcuaaacgugacgcucgaccaccugcaauccaaugcggaguucgcgcucaucgaccgaauucaucaggcuaaagacucuguggacuauauccugaucaauccggccgcguuuacgcauaccagcguggccauccgcgacgcgcugcuugccgugaguaucccguuuaucgagauccaccugagcaacgugcaugcgcgcgagccguuccgucaccacucguaucugucugAU.GU.CGcC.UCGGG.......CGU------G....AU..CUG.C.GG..............................................................AUUAGGUG------..........................---CGGACGGCUAU...........--........................................UCAUA.CGCU.UUAC.A.GACGGCGGUA
   NZ_CP043318.1     AGCCU.CU.GAAAAGG.UGACAU.UUGCGUUUCG.AAGGUAU.AU.UUUGUUUUUUACC.C.GAA.....A........AUCGCAGGAGAUAGCGGCAUAAUGACUGAUAAGUUC.CAUAucuuaguuuugaacggaccgaaccugaacaugcucggcacccgugagccagagaaguacggcacgcuaacauugagugaaauuguuaaccgucugggaacggaagcagcgucgcugaauguggauuuggaucauuuucagucgaacgcggaguacgcacucaucg...........accguauucaucaggcuaaagacacuguggacuauauccugaucaauccggccgcguuuacgcacaccaguguugcuauccgcgacgcacugcucgcggugaguaucccguuuaucgagauccaccugaguaacgugcacgcccgagagccguuccgccaccauucAU.AU.CU.G.UCGGA......uAUCG----CU....GC..CGG.C.GU..............................................................UAUCUGUGGACUUG..........................GCGCUGACGGCUAU...........--........................................UCAUA.CGCU.UUAC.A.GACAGCGGUA
   NZ_CP043342.1     GGACU.CU.GAUUAGG.UGACAA.UCGCGCAUCG.AAGGUAU.AU.UUUGUUUUUUACC.G.GAG.....A........AUCGCAGGAGAUAGCGGCACAAUGGCUGAUAAAUA-.----ccagaucuuaguuuugaacggaccgaaccucaacaugcucggaacccgugagccagagaaguacggcucgcucacauugagugaaauuguuaaccgucuugaaacggaagcagcgucgcugaacgucgauuuggaucauuuuca.....................................................gucaaacgcggaguacgcaaucaucgaccguauucaucaggcuaaagacaauguggacuauauccugaucaauccggccgcguuuacgcacaccagugucgcuauucgcgacgcacugcucgcggugaguaucccguuuaucgag--.AU.C-.C.ACCUG.......AGCAACGUGC....ACgcCCG.U.GAgccguuccgccaccauuccuac.................cugucggauaucgccgccgguguUAUCUGCGGACUGG..........................GUGCGGACGGUUAU...........--........................................UCAUA.CGCU.UUAC.A.GACAGCGGUA
   NZ_CP044098.1     AGGCG.CU.GAAAGGG.UGACAA.UCGCAUAUUG.AAGGUAU.AU.UUUGUCUUUUACC.C.GAA.....A........AUGGCAGAAGAUAGCCGCACAAUGACUAACAAGUCU.GGCA......................................................................................................................................................................................................................................................................................................................................................AU.CU.CA.C.UUAAU.......GGCAGCA-GC....AC..CCA.G.UGcagcg...................................................ccugag-----------AU-gcgugg.............caucuugUCACUCACUGUUAU...........--........................................AAAAA.UGCU.AUAC.A.GACGGCGGUA
   NZ_CP045300.1     GGACU.UU.AACAACG.UGACAA.CCACGCAACC.AAGGUAU.AU.UUUGUUUUUUACC.G.GAA.....A........AUUGCAGGAGAUAGCAGCACAAUGGCGGACAAAUUG.CGUA......................................................................................................................................................................................................................................................................................................................................................UU.-U.UG.C.UUUUG.......AACGGCCCCA....AU..CUG.A.AUaugcugg...............................................gaacccgu--------------gaacccaaaacuuacgguucgcucacUCUGCAGCAGAU--...........UG........................................UUAAC.CGUU.UAAC.A.AAUGAAGCGG
   NZ_CP045771.1     GAGCG.CU.GAAAGGG.UGACAU.UCGCAUGUUG.AAGGUAU.AU.UUUGUCUUUUACC.C.GAA.....A........AUGGCAGAAGAUAGCCGCACAAUGACUAACAAGUCU.GGCA......................................................................................................................................................................................................................................................................................................................................................AU.CU.CA.C.UUAAU.......GGCAACC-GC....AC..CCA.G.UGcaaug...................................................ccugag--------------augcgug...........gcaucuugUCACUCACUGUUAU...........--........................................AAAAA.UGCU.AUAC.A.GACGGCGGUA
   NZ_CP045783.1     UGACC.CU.GAAAAGG.UGACAA.GGGCGCAUUG.AAGGUAU.AU.GUUGUUUUUUACC.C.GAA.....G........AUGGCAGGAGAUCGCCACACGAUGGCUGACAAGUUU.CACAuuuugcuuuugaaugguccaaacauuaacaugcucgguacccgcgagccugauaaguauggcacccucucgcuggcugaaauuguuaaccguuuaacaucugaggcggcggcgcugaaugugagccuggaucaccugcaguc.........................................................caacgcggaguaugcguuaaucgaccgaauucaucaggcuaaagacaacguggacuauauccugauuaauccggccgcguucgcgcauaccagcguagcaauccgugacgcguugcuugccgugaacaucccguuuaucgaga-U.-U.CA.C.UUG--.......AGCAACGUGC....AU..GCA.C.GCgaacccuuccgccagca............................cucauaccugucagaug--------U-----..........................--------------...........--cgccgcuggcgucauuugcggacugggggcggacggcuauUCAUA.CGCU.UUAC.A.GACGGCGGUA
   NZ_CP045845.1     AGCCU.CU.GAAAAGG.UGACAA.UCGCGCAUCG.AAGGUAU.AU.UUUGUUUUUUACC.C.GAG.....A........AUAGCAGGAGAUAGCAGCACAAUGACUGACAAGUUU.CGCAuuuugcuuuuaaauggcccgaaccugaauauguuaggcacccgugagccagagaaguacggcacgcuaacgcuuucccagaucguuagccgcuugaacgcggaagccgaaacgcuuaacgucacgcucgacagucugcaaucuaacgccgaguacgucauca.................ucgaccguauucaucaggcuaaagacaacauugacuauauccugauuaauccggccgcguucacgcacacgagcguugccauucgcgaugcguugcuggcagugaguaucccguuuaucgagauucacuuaagcaacgugcaugcgcgcgaaccauuccgcca--.-U.CA.C.UCGUAu.....cUGUCUGAUAU...cGC..CUC.A.GGc...........................................................guUAUCUGCGGACUUG..........................GAGCUGACGGCUAU...........--........................................UCAUA.CGCU.UUAC.A.GACGGCGGUC
   NZ_CP049608.1     UAGGG.CG.CAAAGUGaUGACAA.UCAGGCAAUG.AAGGUAU.AU.UUUGUAAUAUCAC.C.GAA.....A........UUUGCAGGAGAUGCAGGCACGAUGGCGGACAAA-UU.----cacgauuuugcuuuugaacggaccaaaccugaacaugcuggguacgcgagagccugagaaguauggcagccucacgcuuaaccaaauuguuacagauuugaaagcucaggcagaggcaaugaaugucgcgcuggaa.....................................................................gaccugcaauccaacgcggaguauguguugauugaccgcauucaucaggcgaaagacaagguggauuacauucugauaaauccggcugcguucacccacaccaguguugcgauucgcgaugcgcuguuggcggugag--.--.CA.U.UCCGUu.....uAUCGAAAUUC....AC..CUG.A.GCaacguccacgcccgugagccuuuccggcaucacucguaucucucggauauugcugccggcguCAUCUGCGGAUUCG..........................GCGCUGACGGUUAU...........--........................................UCAUA.UGCU.UUAC.A.GACGGCGGUA
   NZ_CP050508.1     UACGC.CCuGAAAAGG.UGACAA.GCGCGUUUCG.AAGGUAU.AU.UUUGUUUUUUACC.C.GAG.....A........AUGGCAGGAGAUAGCCGCACAAUGGCUGACAAGUUU.CGCAuuuugcuuuugaauggacccaaccuuaacaugcuugguacacgcgagccugagaaguacggcacccucaagcuuucugagauuguuaaccgucuggaaucagaagcugcggcucugaacguggcgcuggaucaccugcaaucaaacgcggaguacgcguuaaucg...........accgaauucaucaggcuaaagacgcugucgacuauauccugauuaauccggccgcguuuacgcacaccagcguggcaauccgcgacgcgcuacuugcggugaguaucccguuuaucgagauccaccugagcaacgugcaugcccgcgaaccauuccgucaucacucUU.AU.CU.G.UCGGAua...uc----------....GC..CGC.A.GGc...........................................................guUAUCUGUGGAUUGG..........................GGGCGGACGGUUAU...........--........................................UCAUA.CGCU.UUAC.A.GACGGCGGUA
   NZ_CP051548.1     UAAGGuCC.AAAAAGG.UGACAA.CCACGCAAUG.AAGGUAU.AU.UUUGUUUUUUACC.G.GAA.....A........AUUGCAGGAGAUAGCAGCACGAUGGCUGGCAAGUUG.CGCAuuuugcuuuuaaacggccccaaucuuaacaugccgggagcacgcaagucggaaaccuaugg............................................................................................................................................................................................................................cacccuucgacuuuacugaguucacucugagcaauaugcaugcgcacgaaccaucucgcca--.-U.CA.U.UCCUGgc...ucUCCGAAAUCGc..uAC..UGG.C.GU..............................................................GGUCUUCGGACCUU..........................AUGCUGGCAGUUGU...........--........................................ACAUA.CGCU.UUAC.A.GACGGCGGUA
   NZ_CP054058.1     GGCCU.CU.GAAAAGG.UGACAA.GCGCGCAUCG.AAGGUAU.AU.UUUGUUUUUUACC.G.GAG.....A........AUUGCAGGAGAUAGCAGCACGAUGGCCGACAAGUUA.CGCA......................................................................................................................................................................................................................................................................................................................................................UU.-U.UG.C.UUUUA.......AACGGACCGA....AC..CUG.A.ACaugcucggca..........................................cccgugagcc--------------agagaagua.......uggcucccagACGUUAGCGGAAAU...........-U........................................GUAAAcCGUU.UAAC.-.GACGGAAGCU
   NZ_CP055292.1     CGCUG.CG.GAAAAGG.UGACAU.UGGCGCAACG.AAGGUAU.AU.UUUGUUUUUUGCC.G.GAG.....G........AUAGCAGCAGAUCGCUGCACAAUGUCCGUCAAGUCU.AACA......................................................................................................................................................................................................................................................................................................................................................UU.GA.CA.C.UCUGG.......GGCAAAAUAG....AC..CGG.C.GUcccggcc................................................ugcugga--AUUUAUCGC---.........................uAUGCAUAC------agcu...gucgGG........................................GCAUA.CGCU.UUAC.A.GACGGCGGUG
   NZ_CP063425.1     AGCCU.CU.GAAAAGG.UGACAA.UCGCGAAUCG.AAGGUAU.AU.UUUGUUUUUUACC.C.GAG.....A........AUCGCAGGAGAUAGCGGCACAAUGGCUGGCAAGUUC.CACAuauuaguuuugaacggaccgaaccuaaacaugcuuggcacccgugagccggauaaguacggcacgcuuacgcuuagcgagauuguuaacgguuugagcaccgaagcggcagcgcuugauguggaacuggcgcauuuucagucaaacgcggaguacgcaauca.................ucgaccguauucaucaggcaaaagacauuauggacuuuauccugaucaauccggccgcguuuacgcacaccaguguugcuauccgcgacgcauuguuggcggucgguaucccguuuaucgagauccaccucaccaacgugcaugcgcgggagccauuccgcca--.-C.CA.C.UCGUA.......UCUGUCAGAU....AU..CGC.C.GAggg........................................................cgu------UAUUUGCGggc....................uggGCGCGGAAGGUU--...........AU........................................UCAUA.CGCU.UUAC.A.GACGGCGGUA
   NZ_CP065838.1     UGACC.CU.GAAAAGG.UGACAA.GGGCGCAUUG.AAGGUAU.AU.GUUGUUUUUUACC.C.GAA.....A........AUGGCAGGAGAUCGCCACACGAUGGCAGACAAGUUU.CACAuuuugcuuuugaaugguccaaacauuaacaugcucgguacccgcgagccagagaaguauggaucucucacgcuggcugagauuguuaaccauuuaacaucugaagcagcggcgcugaaugugagccuggaucaccugcaguccaacgcggagcaugcguuaau................cgaccgaauucaucaggcuaaagacaacguggacuauauccugauuaauccggccgcguucacgcauaccagcguagcaauccgugacgcguugcuugccgugaacaucccguuuaucgagauucaccugagcaaugugcaugcacgcgaacccuuccgccag--.--.CA.U.UCGUA.......UCUGUCAGAU....AU..CGC.C.GCugg........................................................cguUAUCUGCGGACUGG..........................GGGCGGACGGCUA-...........-U........................................UCAUA.CGCU.UUAC.A.GACGGCGGUA
   NZ_CP070290.1     AGCCG.CG.GAAAAGG.UGACAA.UGGCGCAACG.AAGGUAU.AU.UUUGUUUUUUGCC.G.GAG.....G........AUAGCAGCAAAUCGCUGCACAAUGUCCGUCAAGUCU.UACA......................................................................................................................................................................................................................................................................................................................................................UU.GA.CA.C.UCUGG.......GGCAAAAUAG....AC..CGG.C.GUcccgg...................................................ccugcu-----------GGA..........................AUUUACCGCUAUGCaucagcugucgGG........................................ACAUA.CGCU.UUACuA.GACGGCGGUG
   NZ_CP071070.1     AGCCG.CU.GAAAGGG.UGACAA.UCGCGCUUUG.AAGGUAU.AU.UUUGUUUUUUGCC.G.GAG.....G........AUUGCCGCAAAUCGCAGCAUUUUGACCGACAAGUCU.CAC-......................................................................................................................................................................................................................................................................................................................................................UU.GA.GG.C.GUAAA.......GGCGAAAUAG....UC..CGA.C.GUc............................................................c--UGACAGGCAAAC.........................gCGCUGUUGCCGUUG...........GG........................................ACUCA.CGCU.UUAC.A.GACAGCGGUA
   NZ_CP071383.1     GGCCU.CU.GAAAGGG.UGACAA.UCGCGCAUCG.AAGGUAU.AU.UUUGUUUUUUACC.C.GAG.....A........UUCGCAGGAGAUAGCGGCAUAAUGGCUGGUAAAUUU.CAAAucuuaguucuuaacggaccgaaccugaacaugcucggaacccgugagccagagaaguauggcacgcuaacauugagugaaauuguuaaccgucuggguacggaagcagcgucauuagauguggauuuggaccauuuucagucaaaugcggaguacgcaaucaucg...........accguauucaucaggcuaaagacaauguggacuauauccugaucaauccggccgcguuuacgcacaccaguguugcuauccgcgacgcacugcuugcggugaguaucccguuuaucgagauccaucugaguaacgugcaugcccgagaaccguuccgccaccauucCU.AC.CU.G.UCGGA......uAUCG----CC....GC..AGG.C.GU..............................................................UAUCUGUGGACUGG..........................GUGCAGACGGUUAU...........--........................................UCAUA.CGCU.UUAC.A.GACAGCGGUA
   NZ_CP073236.1     GAGUC.CC.GAAAAGG.UGACAA.UCGCGCAUCG.AAGGUAU.AU.UUUGUUUUUUACC.C.GAG.....A........AUGGCAGAAGAUAGCCGCAUAUUGGCCGAUAAGUUU.CGCU......................................................................................................................................................................................................................................................................................................................................................UU.UUgCU.U.UCGGG......cAUCGGAGGCUu..aAC..CUGuC.GG..............................................................CUUCUGAAGAAGCGcggc.................gucguGCAACAG-------ca......guaAU........................................UCAUA.UGCU.UUAC.A.GACGGUGCUA
   NZ_CP074352.1     GACGG.UC.-AAAAGG.UGACAA.CCAUGCAACA.UGGGUAU.AU.UUUGUAAAUUGCC.U.UAA.....A........UUUGCAGGAGAUUGCGGCACGAUGGCGGAUAAGUUU.CACAuuuugcuuuugaacggcccgaaccuuaacaugcucggcacccgugaaccggagaaguacggcacccugacucucaaccagauugucagccgucucaccgcagaagcacagucguuagacgugacgcuugauagccugcaauccaacgcugagcaugagcugauug...........accgaauucaucaggcuaaagacaacguggacuauauccugauuaauccggccgcauucacacauaccagcguugcgauccgugaugcgcugcuggcggugagcaucccguuuauugagauccaucucaguaacgugcaugcccgcgagccguuccgccaucacucAU.AU.CU.U.UCAGA.......UAUUG---CU....GC..CGG.C.GU..............................................................GAUCUGCGGAUUUG..........................GCGCCGACGGUUAU...........--........................................ACCUA.UGCA.CUAC.A.GACGGCGGUA
   NZ_CP077262.1     CAGCG.CA.GAAAGGG.UGACAA.UCGCAUAUUG.AAGGUAU.AU.UUUGUCUUUUACC.C.GAA.....A........AUGACAGAAGAUAGCCGCACAAUGACUAACAAGUCU.GGCA......................................................................................................................................................................................................................................................................................................................................................AU.CU.CA.UaUAAUGgccgcagCACGCAGUGC....AA..CGC.C.UGa............................................................g--AUG---------cguggc..............aucuugUCACUCACUGUUAU...........--........................................AAAAA.UGCU.AUAC.A.GACGGCGGUA
   NZ_CP077392.1     GGCCU.CU.GAAAGGG.UGACAA.UUGCGUGUUG.AGGGUAU.AU.GUUGUUUUUUACC.C.GAA.....A........AUCGCAGGAGAUAGCGGCACAAUGGCUGACAAAUUC.CAAAuuuuaguauugaacggaccgaaccugaacaugcucggcacccgugagccagagaaguacggcacgcugacauugagcgaaauuguuaaccgucuggguacggaagcagccucgcugaauguggauuuggaccauuuucaguc.........................................................aaacgcggaguacgcaaucaucgaccguauucaucaggcuaaagacacuguggacuauauccugaucaauccggccgcguuuacgcacaccaguguugcuauacgcgacgcacugcucgcggugaguaucccguuuaucgaga--.-U.CC.A.UCUG-.......AGUAACGUGC....AC..GCC.C.GAgagccguuccgccaccauuccua...............cuugucagauaucgccgcuggcguGAUAUGUGGGCUGG..........................GUGCAGACGGCUAU...........--........................................UCAUA.CGCU.UUAC.A.GACAGCGGUA
   NZ_CP082833.1     GGACG.CU.GAAAGGG.UGACAA.UUGCGCUUUG.AAGGUAU.AU.UUUGUUUUUUGCC.G.GAG.....G........AUUGCCGCAAAUCGCAGCAUGUUAACCGAUAAGUCUcAACA......................................................................................................................................................................................................................................................................................................................................................UC.AU.CAuC.UUUGA.......GGCAAAGUAU....AC..CGG.C.GUc...........................................................cu---GACGGGCAAACg.......................cgCUGUUGCCG-----u........cgGA........................................AUACA.CGCU.UUAC.A.GACAGCGGUA
   NZ_CP083638.1     CGCCG.UA.CAGAGGG.UGACAU.UCGCACAAUA.GAGGUAU.AU.UUUGUUUUUUGCC.G.GAG.....G........AUUGCAGAAGAUCGCUGCAAAAUAUCCGACAAGUCU.CGCA......................................................................................................................................................................................................................................................................................................................................................A-.-C.UA.G.UCUGA.......GACCGAAUAU....AC..CUG.C.GAacc.......................................................ggca-------CGACUACg.......................cuAUGAAUGCAGUUG-u........cgGA........................................GCAUA.CGCU.UUAC.A.GACGGCGGUG
   NZ_CP087880.1     AGCCC.CU.GAAAAGG.UGACAA.UCGCGCAUCG.AAGGUAU.AU.UUUGUUUUUUACC.G.GAG.....A........AUUGCAGGAGAUAGCAGCACAAUGGCAGACAAGUUU.CGCAuuuugcuuuuaaacggcccgaaccugaauaugcucggcacccgugaacccgagaaguacggaacgcuaacgcuugcgcaaaucguuaacgguuugcagcgcgaagcggaagcacugaacguugagcuggaucaucugcaauccaa....................................................cgcggaguacgcacucaucgaccgaauucaucaggcuaaagacacugucgacuauauccugauuaauccggccgcguuuacgcacacaagcguugcccuucgagaugcgcugcuggcgguaaguaucccguuuaucgagauucac--.--.--.C.UC---.......AGCAAUGUGC....AU..GCG.C.GCgaaccguuucgccaucauucgu.................aucugucugaugucuccgcuggcG-------------..........................--------------...........--uuauuugcggguua...........ggcgcagaugguuauUCAUA.CGCG.UUAC.A.GACGGCGGUA
   NZ_CP093334.1     GGGCC.CU.GAAAAGG.UGACAA.GCGCGCUUCG.AAGGUAU.AU.UUUGUUUUUUACC.C.GAG.....A........AUGGCAGGAGAUAGCCACACAAUGGCUGACAAGUUU.CGCAuuuugcuuuuaaacggacccaaccuuaacaugcucggcacucgugagccugagaaguauggcacccuuaagcuuucugagauuguuaaccgucuggaaucagaagcuucggcucugaacguggcgcuggaucaccugcaguccaaugcggaguucgcgcuaaucgaccgaauucaucaggcuaaagacacuguggacuauauccugauuaauccggccgcguuuacgcacaccagcguggcuauccgcgaugcauuacuugcggucaguaucccguuuaucgagauucaccugagcaacguacaugcacgcgaaccguuccgucaccacuccuaucugucggAU.AU.CGcC.UCGGG.......CGU------C....AU..CUG.C.GG..............................................................A---------CUCG..........................GUGCGGACGGCUAU...........--........................................UCAUA.CGCU.UUAC.A.GACGGCGGUA
   NZ_CP107077.1     AAGCU.CC.GAAAAGG.UGACAA.GCGCGAAUCG.AAGGUAU.AU.UUUGUUUUUUGCC.G.AAG.....A........AUCGCAGGAGAUAGCAGCAUAAUGGCUGAUAAGUUC.CAU-guauugguuuugaacggaccgaaccugaauaugcucgguacgcgagagccggagaaguacggcacccugacacuugaggagauuguuaauucuuugaguacagaaagcgcggcacuuaauguggaacuggcaca..........................................................................uuuucagucuaacgcggaguacgcaaucaucgaccguauucaucaggcuaaagacguaacugacuucauccugauuaauccggccgcguuuacgcacaccaguguugcuauccgugaugcguugcuggcggugaAU.AU.CC.C.GUUU-.......AUCGAGAUUC....AC..CUC.A.GCaauguacaugcgcgggagccguuccgucaccacuccuaucucucggauauugccguuggcguUAUCUGCGGGCUUG..........................GUGCGGACGGUUAU...........--........................................UCAUA.CGCU.UUAC.A.GACGGCGGUA
   NZ_FO704550.1     GAUAU.CA.GAAAGAGaUGACAA.ACCGUUAACA.UCGAGUU.AUcUUGGUCGAUUGUU.G.ACA.....G........AUUGCCGGAGAUACCCGCACAAUGGCAGAUAAGUUU.CGCA......................................................................................................................................................................................................................................................................................................................................................UU.UU.AC.U.CUUGAa....ugGCCCCAA--C....CU..GAA.C.CUguuggga...............................................acgcgaga--GCCAGAGACCUAcg......................gcAAGUUAACGC----u.........uGA........................................UGACA.UCGU.UAAC.A.GACUG---UC
   NZ_LR134485.1     CAGCG.CA.GAAAGGG.UGACAA.UCGCAUAUUG.AAGGUAU.AU.UUUGUCUUUUACC.C.GAA.....A........AUGGCAGAAGAUAGCCGCACAAUGACUAACAAGUCU.GGCA......................................................................................................................................................................................................................................................................................................................................................AU.CU.CA.UaUAAUGgccgcagCACGCAGUGC....AA..CGC.C.UGa............................................................g--AUG---------cguggc..............aucuugUCACUCACUGUUAU...........--........................................AAAAA.UGCU.AUAC.A.GACGGCGGUA


   Structure         (((((.(........(.(((.....((((........(((.(.((.((((((.....((.(.(((.................(((((.....))))).........(((((...............................................................................................................................................................................................................................................................................................................................................................)).)).)..).))))).......))))))))).....))..).....((.........................................................................................................................................................................))....)))).)))).......))))))


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accB-accC



Position: 70-229, Conformation: #0







97% 90% 75% 50% Nucleotide present N N N Nucleotide identify E < 0.1 Base-pair covariation E < 0.05 Helix-level covariation 97% 90% 75%

R C C G A A A R G G U G A C A A Y R G Y R Y R A A G G U A U A U U U U G U Y U U U U R C C G A R R A U G C A G G A G A U R G C G C A Y R A U G R C G A Y A A R U U Y C R Y A Y Y Y R Y R R Y Y R R Y A U A Y G C U U U A C A G A C R G Y G G U R 5'