accB-accC



Position: 320-515, Conformation: #0







DMS reactivity > 1.0 0.0 0.4 0.7 G/U/No data
Position: 0 (position.label in template: 0.5')5' Position: 1 (position.label in template: 1.U) Reactivity: nanU Position: 2 (position.label in template: 2.A) Reactivity: nanA Position: 3 (position.label in template: 3.U) Reactivity: nanU Position: 4 (position.label in template: 4.U) Reactivity: nanU Position: 5 (position.label in template: 5.C) Reactivity: nanC Position: 6 (position.label in template: 6.G) Reactivity: nanG Position: 7 (position.label in template: 7.U) Reactivity: nanU Position: 8 (position.label in template: 8.A) Reactivity: nanA Position: 9 (position.label in template: 9.A) Reactivity: nanA Position: 10 (position.label in template: 10.G) Reactivity: nanG Position: 11 (position.label in template: 11.A) Reactivity: nanA Position: 12 (position.label in template: 12.U) Reactivity: nanU Position: 13 (position.label in template: 13.U) Reactivity: nanU Position: 14 (position.label in template: 14.A) Reactivity: nanA Position: 15 (position.label in template: 15.A) Reactivity: nanA Position: 16 (position.label in template: 16.A) Reactivity: nanA Position: 17 (position.label in template: 17.A) Reactivity: nanA Position: 18 (position.label in template: 18.A) Reactivity: nanA Position: 19 (position.label in template: 19.A) Reactivity: nanA Position: 20 (position.label in template: 20.C) Reactivity: nanC Position: 21 (position.label in template: 21.U) Reactivity: nanU Position: 22 (position.label in template: 22.G) Reactivity: nanG Position: 23 (position.label in template: 23.A) Reactivity: nanA Position: 24 (position.label in template: 24.U) Reactivity: nanU Position: 25 (position.label in template: 25.C) Reactivity: nanC Position: 26 (position.label in template: 26.G) Reactivity: nanG Position: 27 (position.label in template: 27.A) Reactivity: nanA Position: 28 (position.label in template: 28.G) Reactivity: nanG Position: 29 (position.label in template: 29.C) Reactivity: nanC Position: 30 (position.label in template: 30.U) Reactivity: nanU Position: 31 (position.label in template: 31.G) Reactivity: nanG Position: 32 (position.label in template: 32.G) Reactivity: nanG Position: 33 (position.label in template: 33.U) Reactivity: nanU Position: 34 (position.label in template: 34.U) Reactivity: nanU Position: 35 (position.label in template: 35.G) Reactivity: nanG Position: 36 (position.label in template: 36.A) Reactivity: nanA Position: 37 (position.label in template: 37.A) Reactivity: nanA Position: 38 (position.label in template: 38.G) Reactivity: nanG Position: 39 (position.label in template: 39.A) Reactivity: nanA Position: 40 (position.label in template: 40.A) Reactivity: nanA Position: 41 (position.label in template: 41.U) Reactivity: nanU Position: 42 (position.label in template: 42.C) Reactivity: 0C Position: 43 (position.label in template: 43.A) Reactivity: 0.5A Position: 44 (position.label in template: 44.G) Reactivity: nanG Position: 45 (position.label in template: 45.G) Reactivity: nanG Position: 46 (position.label in template: 46.C) Reactivity: 0C Position: 47 (position.label in template: 47.A) Reactivity: 0.5A Position: 48 (position.label in template: 48.U) Reactivity: nanU Position: 49 (position.label in template: 49.C) Reactivity: 0C Position: 50 (position.label in template: 50.U) Reactivity: nanU Position: 51 (position.label in template: 51.C) Reactivity: 0.5C Position: 52 (position.label in template: 52.C) Reactivity: 1C Position: 53 (position.label in template: 53.G) Reactivity: nanG Position: 54 (position.label in template: 54.A) Reactivity: 1A Position: 55 (position.label in template: 55.A) Reactivity: 0.5A Position: 56 (position.label in template: 56.C) Reactivity: 1C Position: 57 (position.label in template: 57.U) Reactivity: nanU Position: 58 (position.label in template: 58.G) Reactivity: nanG Position: 59 (position.label in template: 59.G) Reactivity: nanG Position: 60 (position.label in template: 60.A) Reactivity: 0A Position: 61 (position.label in template: 61.A) Reactivity: 0A Position: 62 (position.label in template: 62.A) Reactivity: 0A Position: 63 (position.label in template: 63.U) Reactivity: nanU Position: 64 (position.label in template: 64.U) Reactivity: nanU Position: 65 (position.label in template: 65.U) Reactivity: nanU Position: 66 (position.label in template: 66.C) Reactivity: 0.5C Position: 67 (position.label in template: 67.U) Reactivity: nanU Position: 68 (position.label in template: 68.G) Reactivity: nanG Position: 69 (position.label in template: 69.A) Reactivity: 1A Position: 70 (position.label in template: 70.A) Reactivity: 0.5A Position: 71 (position.label in template: 71.G) Reactivity: nanG Position: 72 (position.label in template: 72.G) Reactivity: nanG Position: 73 (position.label in template: 73.C) Reactivity: 0C Position: 74 (position.label in template: 74.G) Reactivity: nanG Position: 75 (position.label in template: 75.A) Reactivity: 0.5A Position: 76 (position.label in template: 76.A) Reactivity: 0.5A Position: 77 (position.label in template: 77.G) Reactivity: nanG Position: 78 (position.label in template: 78.A) Reactivity: 0A Position: 79 (position.label in template: 79.G) Reactivity: nanG Position: 80 (position.label in template: 80.U) Reactivity: nanU Position: 81 (position.label in template: 81.C) Reactivity: 0.5C Position: 82 (position.label in template: 82.A) Reactivity: 0.5A Position: 83 (position.label in template: 83.G) Reactivity: nanG Position: 84 (position.label in template: 84.U) Reactivity: nanU Position: 85 (position.label in template: 85.A) Reactivity: 0A Position: 86 (position.label in template: 86.C) Reactivity: 0C Position: 87 (position.label in template: 87.G) Reactivity: nanG Position: 88 (position.label in template: 88.C) Reactivity: 0C Position: 89 (position.label in template: 89.A) Reactivity: 1A Position: 90 (position.label in template: 90.U) Reactivity: nanU Position: 91 (position.label in template: 91.U) Reactivity: nanU Position: 92 (position.label in template: 92.A) Reactivity: 1A Position: 93 (position.label in template: 93.G) Reactivity: nanG Position: 94 (position.label in template: 94.C) Reactivity: 1C Position: 95 (position.label in template: 95.C) Reactivity: 0C Position: 96 (position.label in template: 96.G) Reactivity: nanG Position: 97 (position.label in template: 97.U) Reactivity: nanU Position: 98 (position.label in template: 98.G) Reactivity: nanG Position: 99 (position.label in template: 99.C) Reactivity: 0C Position: 100 (position.label in template: 100.A) Reactivity: 1A Position: 101 (position.label in template: 101.G) Reactivity: nanG Position: 102 (position.label in template: 102.C) Reactivity: 0C Position: 103 (position.label in template: 103.U) Reactivity: nanU Position: 104 (position.label in template: 104.C) Reactivity: 0C Position: 105 (position.label in template: 105.C) Reactivity: 0C Position: 106 (position.label in template: 106.U) Reactivity: nanU Position: 107 (position.label in template: 107.G) Reactivity: nanG Position: 108 (position.label in template: 108.C) Reactivity: 0C Position: 109 (position.label in template: 109.C) Reactivity: 0C Position: 110 (position.label in template: 110.G) Reactivity: nanG Position: 111 (position.label in template: 111.C) Reactivity: 0.5C Position: 112 (position.label in template: 112.A) Reactivity: 0.5A Position: 113 (position.label in template: 113.A) Reactivity: 0.5A Position: 114 (position.label in template: 114.G) Reactivity: nanG Position: 115 (position.label in template: 115.U) Reactivity: nanU Position: 116 (position.label in template: 116.U) Reactivity: nanU Position: 117 (position.label in template: 117.U) Reactivity: nanU Position: 118 (position.label in template: 118.C) Reactivity: 0.5C Position: 119 (position.label in template: 119.C) Reactivity: 0.5C Position: 120 (position.label in template: 120.C) Reactivity: 0.5C Position: 121 (position.label in template: 121.U) Reactivity: nanU Position: 122 (position.label in template: 122.G) Reactivity: nanG Position: 123 (position.label in template: 123.U) Reactivity: nanU Position: 124 (position.label in template: 124.G) Reactivity: nanG Position: 125 (position.label in template: 125.A) Reactivity: 0.5A Position: 126 (position.label in template: 126.U) Reactivity: nanU Position: 127 (position.label in template: 127.G) Reactivity: nanG Position: 128 (position.label in template: 128.C) Reactivity: 0C Position: 129 (position.label in template: 129.A) Reactivity: 0.5A Position: 130 (position.label in template: 130.A) Reactivity: 1A Position: 131 (position.label in template: 131.C) Reactivity: 1C Position: 132 (position.label in template: 132.A) Reactivity: 1A Position: 133 (position.label in template: 133.A) Reactivity: 0.5A Position: 134 (position.label in template: 134.G) Reactivity: nanG Position: 135 (position.label in template: 135.C) Reactivity: 0.5C Position: 136 (position.label in template: 136.U) Reactivity: nanU Position: 137 (position.label in template: 137.U) Reactivity: nanU Position: 138 (position.label in template: 138.A) Reactivity: 1A Position: 139 (position.label in template: 139.C) Reactivity: 0.5C Position: 140 (position.label in template: 140.G) Reactivity: nanG Position: 141 (position.label in template: 141.C) Reactivity: 0C Position: 142 (position.label in template: 142.U) Reactivity: nanU Position: 143 (position.label in template: 143.G) Reactivity: nanG Position: 144 (position.label in template: 144.C) Reactivity: 0C Position: 145 (position.label in template: 145.A) Reactivity: 0A Position: 146 (position.label in template: 146.C) Reactivity: 0C Position: 147 (position.label in template: 147.C) Reactivity: 0C Position: 148 (position.label in template: 148.A) Reactivity: 0.5A Position: 149 (position.label in template: 149.A) Reactivity: 1A Position: 150 (position.label in template: 150.U) Reactivity: nanU Position: 151 (position.label in template: 151.G) Reactivity: nanG Position: 152 (position.label in template: 152.A) Reactivity: 0A Position: 153 (position.label in template: 153.U) Reactivity: nanU Position: 154 (position.label in template: 154.G) Reactivity: nanG Position: 155 (position.label in template: 155.C) Reactivity: 0C Position: 156 (position.label in template: 156.A) Reactivity: 0A Position: 157 (position.label in template: 157.G) Reactivity: nanG Position: 158 (position.label in template: 158.C) Reactivity: 0C Position: 159 (position.label in template: 159.A) Reactivity: 1A Position: 160 (position.label in template: 160.G) Reactivity: nanG Position: 161 (position.label in template: 161.C) Reactivity: 0C Position: 162 (position.label in template: 162.C) Reactivity: 0C Position: 163 (position.label in template: 163.A) Reactivity: 0.5A Position: 164 (position.label in template: 164.G) Reactivity: nanG Position: 165 (position.label in template: 165.C) Reactivity: 0C Position: 166 (position.label in template: 166.U) Reactivity: nanU Position: 167 (position.label in template: 167.C) Reactivity: 0.5C Position: 168 (position.label in template: 168.A) Reactivity: 0.5A Position: 169 (position.label in template: 169.A) Reactivity: 0A Position: 170 (position.label in template: 170.U) Reactivity: nanU Position: 171 (position.label in template: 171.C) Reactivity: 0C Position: 172 (position.label in template: 172.U) Reactivity: nanU Position: 173 (position.label in template: 173.A) Reactivity: 1A Position: 174 (position.label in template: 174.A) Reactivity: 1A Position: 175 (position.label in template: 175.C) Reactivity: 0C Position: 176 (position.label in template: 176.G) Reactivity: nanG Position: 177 (position.label in template: 177.C) Reactivity: 0C Position: 178 (position.label in template: 178.A) Reactivity: 1A Position: 179 (position.label in template: 179.G) Reactivity: nanG Position: 180 (position.label in template: 180.C) Reactivity: 0C Position: 181 (position.label in template: 181.C) Reactivity: 0C Position: 182 (position.label in template: 182.G) Reactivity: nanG Position: 183 (position.label in template: 183.C) Reactivity: 0C Position: 184 (position.label in template: 184.U) Reactivity: nanU Position: 185 (position.label in template: 185.C) Reactivity: 0C Position: 186 (position.label in template: 186.C) Reactivity: 0.5C Position: 187 (position.label in template: 187.G) Reactivity: nanG Position: 188 (position.label in template: 188.G) Reactivity: nanG Position: 189 (position.label in template: 189.C) Reactivity: 0C Position: 190 (position.label in template: 190.G) Reactivity: nanG Position: 191 (position.label in template: 191.A) Reactivity: 1A Position: 192 (position.label in template: 192.C) Reactivity: 1C Position: 193 (position.label in template: 193.C) Reactivity: 0.5C Position: 194 (position.label in template: 194.G) Reactivity: nanG Position: 195 (position.label in template: 195.U) Reactivity: nanU Position: 196 (position.label in template: 196.U) Reactivity: nanU Position: 197 (position.label in template: 197.C) Reactivity: nanC Position: 198 (position.label in template: 198.C) Reactivity: nanC Position: 199 (position.label in template: 199.U) Reactivity: nanU Position: 200 (position.label in template: 200.U) Reactivity: nanU Position: 201 (position.label in template: 201.C) Reactivity: nanC Position: 202 (position.label in template: 202.C) Reactivity: nanC Position: 203 (position.label in template: 203.A) Reactivity: nanA Position: 204 (position.label in template: 204.U) Reactivity: nanU Position: 205 (position.label in template: 205.G) Reactivity: nanG Position: 206 (position.label in template: 206.G) Reactivity: nanG Position: 207 (position.label in template: 207.A) Reactivity: nanA Position: 208 (position.label in template: 208.A) Reactivity: nanA Position: 209 (position.label in template: 209.G) Reactivity: nanG Position: 210 (position.label in template: 210.C) Reactivity: nanC Position: 211 (position.label in template: 211.G) Reactivity: nanG Position: 212 (position.label in template: 212.C) Reactivity: nanC Position: 213 (position.label in template: 213.C) Reactivity: nanC Position: 214 (position.label in template: 214.A) Reactivity: nanA Position: 215 (position.label in template: 215.G) Reactivity: nanG Position: 216 (position.label in template: 216.C) Reactivity: nanC Position: 217 (position.label in template: 217.A) Reactivity: nanA Position: 218 (position.label in template: 218.G) Reactivity: nanG Position: 219 (position.label in template: 219.C) Reactivity: nanC Position: 220 (position.label in template: 220.A) Reactivity: nanA Position: 221 (position.label in template: 221.G) Reactivity: nanG Position: 222 (position.label in template: 222.C) Reactivity: nanC Position: 223 (position.label in template: 223.G) Reactivity: nanG Position: 224 (position.label in template: 224.G) Reactivity: nanG Position: 225 (position.label in template: 225.A) Reactivity: nanA Position: 226 (position.label in template: 226.A) Reactivity: nanA Position: 227 (position.label in template: 227.A) Reactivity: nanA Position: 228 (position.label in template: 228.U) Reactivity: nanU Position: 229 (position.label in template: 229.C) Reactivity: nanC Position: 230 (position.label in template: 230.A) Reactivity: nanA Position: 231 (position.label in template: 231.G) Reactivity: nanG Position: 232 (position.label in template: 232.U) Reactivity: nanU Position: 233 (position.label in template: 233.G) Reactivity: nanG Position: 234 (position.label in template: 234.G) Reactivity: nanG Position: 235 (position.label in template: 235.U) Reactivity: nanU Position: 236 (position.label in template: 236.C) Reactivity: nanC Position: 237 (position.label in template: 237.3')3' 10 20 30 50 100 150 200


accB-accC



Position: 320-515, Conformation: #0







Retained alignments:


   NC_004556.1       ACUCAUCGACCUGUUAGAAGAAU...CGAAUCUUUCCGAGAUCGAGAUUAAAGAAGGCGAAGAGA.GUGUACGUUU....GGCG.........................................................................CG....U....A......C...C.....UC....C.A..A.......C.G..C...C...G...G...U...-....-...-....-.-..-.-..--..A.U.GAA--..-.-..---............................................--U.AUA.A.U.G.GC.A..CCA.A.CGA....................................................U.GC...C...G..U...G......G...G...U...A.---.C..........C.....G......U.....C...U......G..U.A..GC......A...AA......UG.U.A...C....C.GG.C.G..GC------..-....--.--.-accggcgaug.....................................................ccgaugauuu...--.-.-..-....CGCC.....CAC..A...GA...U...G..C.U...U.C.U......A..C...C...G..G.C
   NC_004603.1       GCUAAUCGAGUUAGUUGAAGAGU...CUGGCAUUGCUGAGCUAGAGAUUUCUGAAGGUGAAGAGU.CAGUACGCAU....CAGU.........................................................................CG....U...cA......C...G.....GC....A.C..A......gC.A..G...C...U...C...-...-....-...-....-.-..-.-..--..-.-.-----..-.-..---............................................---.---.-.-.-.--.-..---.-.---c..............................................ag...-.--...-...-..-...C......A...C...C...A.GUU.C..........A.....C......U.....-...-......-..A.C..GC......A...GC......AG.C.U...C....C.AG.-.-..--------..-....--.--.-uagcagcaccugcgccaguagcagcacc.................uguagcagacgcgccagccgcugaagcu...--.-.-..-....--CC.....AGC..A...GC...A...G..C.G...G.U.A......C..C...U...G..C.A
   NC_005126.1       ACUGAUCGAGCUGGUUGAAGAAU...CUGGCAUUUCUGAACUGGAAAUUUCUGAAGGGGAAGAGU.CAGUGCGCAU....CAGC.........................................................................CG....C....G......C...A.....UU....A.G..C.......U.C..C...C...C...A...G...A....G...U....U.U..U.C..CG..G.C.AGCUC..A.A..CAA............................................UAU.AUU.C.C.C.GU.U..CAA.G.CAC....................................................A.AC...-...-..-...A......A...C...C...U.GCG.C..........U.....G......G.....C...U......A..A.U..GU......U...GU......UG.C.G...C....C.UU.C.U..-CAAGCUC..U....AC.CA.G............................................................................AA.G.C..G....----.....AUC..A...GC...A...G..C.A...G.-.-......A..U...C...G..G.C
   NC_006300.1       ACUUAUCGAAUUAGUUGAAGAAU...CGGGCAUUAUGGAGUUGGAAAUUUCCGAAGGAGAGGAGU.CCGUUCGUAU....CAGU.........................................................................CG....-....-......C...G.....GC....G.C..G.......-.G..C...C...G...C...A...C....C...A....A.-..-.-..--..-.-.-----..-.-..---gugcgguucaauauacuuuaccugcugcggcaccugcgccgg..---.---.-.-.-.--.-..---.-.---....................................................-.--...-...-..U...A......G...C...-...G.GCU.C..........-.....-......-.....-...-......-..-.C..GC......A...--......UG.C.A...C....C.GG.U.G..GCGGCUCC..U....--.-G.U............................................................................GG.C.G..G....CACC.....UGA..CgcgGU...A...G..C.G...G.A.G......C..U...U...U..C.C
   NC_006512.1       ACUGAUCGAGCUCGUUGAAGAAU...CUGGCGUAGCAGAACUGGAAAUUACCGAGGGCGAAGAGU.CAGUUCGGAU....UA--aucguuacagug.................................................cgcagccugcacCG....A...uG......C...A.....AU....A.C..G.......C.G..C...C...A...C...A...A....-...-....-.-..-.-..--..-.-.-----..-.-..---ccgc.................................aacac..---.---.-.-.-.--.-..---.-.---gcc..........................................ccuc...-.--...-...-..-...A......G...C...A...A.GCG.C..........C.....A......C.....A...-......-..-.A..UC......A...--......-G.C.U...C....C.GG.C.A..AGCCAGCC..A....GC.--.-............................................................................GG.C.U..G....AACC.....AGC..C...AG...U...G..A.A...G.A.A......A..U...U...A..G.C
   NC_008027.1       GCUGAUCGAACUGCUGGAAGAAU...CUGGCAUCGACGAACUGGAGAUCAAGGAAGGCGAAGAGU.CCGUUCGCAU....CAGC.........................................................................CGucacA....G......C...Aa...gAC....C.C..C.......G.G..C...C...G...-...-...-....-...-....-.-..-.-..--..-.-.-----..-.-..---gcgcccagu........................acuucgccg..---.---.-.-.-.--.-..---.-.---ccccgg.....................................cgccga...-.--...-...-..-...U......G...G...C...C.GCU.C..........-.....-......-.....C...U......G..U.C..GC......C...GC......CG.C.U...G....C.CC.-.-..--------..-....--.--.-cgguugccgcugc...............................................cgccccggccgcu...--.-.-..-....--GA.....AGC..C...GC...U...G..C.C...G.-.-......-..-...-...-..-.-
   NC_008260.1       ACUGAUUGAGCUGCUGGAAGAGU...CCGGCAUUGAAGAGCUGGAGAUUUGUGAAGGGGAAGAGU.CCGUGCGCAU....CAGU.........................................................................CG....C....G......-...-.....GC....U.C..U.......C.G..U...C...A...-...-...-....-...-....-.-..-.-..--..-.-.-----..-.-..---accggca............................gcacccg..---.---.-.-.-.--.-..---.-.---cacau......................................uacuau...-.--...-...-..-...-......-...G...C...G.GCC.Cc.......gcA.....G......G.....C...U......C..C.C..GC......U...CC......CG.C.U...C....C.GG.C.A..CCUGUUCC..C....GC.AG.C............................................................................CG.A.A..G....CGCC.....CGC..C...--...-...G..C.G...C.A.G......G..A...U...A..A.U
   NC_008789.1       UCUUAUCGAGCUGCUCGACGAGU...CCGGCGUCCACGAGAUUGAGAUCGCCGAGGGCGAAGAGU.CGGUCCGGAU....CA--.........................................................................CG....C....G......C...A.....AU....-.-..G.......C.G..C...C...C...A...-...-....-...-....-.-..-.-..--..-.-.-----..-.-..---accc..................................gcca..---.---.-.-.-.--.-..---.-.---ccg...........................................cag...-.--...-...-..-...C......C...G...C...A.GC-.C..........G.....A......C.....C...U......A..-.C..GC......C...GC......UC.C.G...G....C.GC.C.G..GCCGCGGC..U....CC.--.-............................................................................GC.C.G..G....CGGC.....UGC..A...GC...CgggG..C.G...C.C.-......-..-...-...-..-.-
   NC_009792.1       ACUGAUCGAGCUGGUUGAAGAAU...CAGGCAUCUCCGAACUGGAAAUUUCUGAAGGCGAAGAGU.CUGUGCGCAU....CAGC.........................................................................CG....C....A......C...C.....GC....G.C..C.......A.A..A...U...G...C...A...G....G...U....U.U..U.C..CG..G.U.GAUGC..A.A..CAA............................................GCU.UAU.G.C.U.GC.G..CCA.A.---....................................................U.GC...A...G..C...A......G...C...C...A.GCU.C..........U.....G......U.....C...U......A..A.C..GC......U...GU......CG.C.U...C....C.GG.C.G..GCUGUUCC..A....GC.AA.U............................................................................GG.A.A..G....CGCC.....UGC..U...GC...AucaG..C.G...G.A.A......A..U...C...A..G.U
   NC_010524.1       CCUGAUCGACCUGGUUUCGGAAU...CGAACAUUUCCGAGCUGGAGAUCACUGAAGCCGA-CGGC.A---------....----agguccggaucgucaa.........................................gaccgcaccgguggcc--....-....-......-...-.....GC....C.-..G.......U.G..G...C...-...-...-...-....-...-....-.-..-.-..--..-.-.-----..-.-..---............................................---.---.-.-.-.--.-..---.-.---a...............................................g...-.--...-...-..-...C......G...C...C...-.GGU.C..........U.....A......U.....G...C......C..G.C..AG......C...GC......C-.-.C...G....U.GG.C.C..GCUCCGGU..-....--.--.-gg.....................................................................cg...GC.C.G..U....GGCC.....-GC..G...GC...C...C..C.G...G.U.G......G..U...C...G..-.-
   NC_010554.1       ACUGAUCGAGCUAGUCGAAGAGU...CUGGCAUUUCUGAACUGGAAAUUUCUGAAGGUGAAGAGU.CAGUACGCAU....CAGU.........................................................................CG....-....-......C...A.....AC....U.C..U.......G.G..C...G...U...U...C...A....G...G....G.U..-.-..--..-.-.-----..-.-..---caaauggcuc......................cucagcaaua..--U.UUU.-.-.-.--.-..---.-.---gcggc......................................accagc...-.--...-...-..-...A......G...C...-...A.CCU.C..........A.....A......C.....C...U......G..C.A..UU......A...GC......AG.C.U..gC....U.GU.G.G..C-------..-....--.--.-accuguagcacca...............................................gaaacaccagcgg...--.-.-..-....CUAC.....AGC..A...AC...G...C..A.A...G.A.A......A..U...U...A..G.C
   NC_010694.1       ACUGAUCGAACUGGUUGAAGAAU...CAGGCAUUGCUGAACUGGAAAUCUCUGAAGGCGAAGAGU.CCGUUCGCAU....CAGC.........................................................................CG....U....G......C...Cc...cGG....U.C.aA.......U.A..C...C...G...-...-...-....G...C....U.A..C.C..CA..A.U.GAUGC..A.G..CAG............................................GCU.UAU.G.C.C.GC.A..CCA.A.UGA....................................................U.GC...A...G..C...A......A...C...C...C.GCG.C..........U.....G......G.....C...A......A..C.C..GC......A...GU......GG.C.U...C....C.GG.C.U..GCCGCUCC..G....GC.AA.U............................................................................GG.A.A..G....CGCC.....CGC..U...GC...U...G..C.U...G.A.G......A..U...C...A..G.U
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   NZ_LT615367.1     ACUGAUCGAACUGGUUGAAGAAU...CCGGCAUCGCCGAACUGGAAAUCUCCGAAGGUGAAGAGU.CAGUACGUAU....CAGC.........................................................................CG....C....G......C...C.....CC....G.G..C.......C.G..U...U...G...C...C...A....G...C....U.A..C.C..CU..G.U.UAUGC..A.G..CAA............................................GCC.UA-.-.-.U.GC.G..CCC.A.UGC....................................................C.GC...A...A..A...U......GgccC...C...G.GCU.C..........C.....A......G.....C...C......C..C.U..GC......C...GC......CG.C.U...C....C.U-.-.-..GCCGCUGU..-....--.--.U............................................................................GC.A.G..A....----.....AGC..C...CC...G...G..C.A...G.C.C......G..U...C...A..G.C
   NZ_LT906448.1     ACUGAUCGAAUUAGUAGAAGAGU...CGGGCAUUAUGGAAUUGGAAAUCUCUGAAGGGGAAGAGU.CAGUUCGUAU....UAAU.........................................................................CG....C....Gg...uuC...U.....GU....U.G..C.......U.C..C...U...G...C...A...G....C...U....G.-..-.-..--..-.-.-----..-.-..---ugcaauaua........................gcgugccug..---.---.-.-.-.--.-..---.-.---uucaagc..................................agcgccag...-.--...-...-..-...C......A...C...C...A.GUU.G..........C.....A......G.....C...A......A..C.U..CC......G...GU......AG.C.U...G....C.AC.C.A..ACAGUGGC..A....UC.AG.C............................................................................GC.C.A..G...cUGUA.....AGC..-...GC...A...G..A.G...G.A.A......A..U...G...U..C.U
   NZ_LT906463.1     ACUCAUUGAGUUAGUAGAAGAAU...CGGGUAUUACCGAAUUAGAGGUUUCCGAAGAAGAGGGGA.CAGUUCGCAU....UAGU.........................................................................CG....U....G......C...U.....GC....A.C..C.......U.G..C...C...G...C...A...G....-...C....G.C..C.U..GU..U.C.AAUAC..A.G..---cgugcc.............................ggcagcu..---.---.-.-.-.--.-..---.-.---gcaccgguugc..........................agcugccccugc...-.--...-...-..-...A......G...C...G...A.GCG.C..........U.....-......C.....C...G......G..U.A..GC......U...GC......AG.C.U...C....C.AG.C.G..GC------..-....--.--.-u.......................................................................a...--.-.-..G....UGCU.....-GC..A...GC...U...G..C.U...G.A.A......G..U...A...A..G.C
   NZ_LT906479.1     ACUGAUCGAACUGGUUGAAGAAU...CAGGCAUUUCUGAACUGGAAAUCUCUGAAGGCGAAGAGU.CGGUUCGCAU....CAGC.........................................................................CG....U....G......C...C.....GC....A.C..-.......C.G..G...C...G...C...A...G....G..cU....U.A..C.C..CA..A.U.GAUGC..A.G..CAG............................................GCC.UAC.G.C.C.AU.G..CCG.G.CAC....................................................C.AC...A...G..C...A......G...C...C...A.GCC.C..........U.....G......G.....C...C......A..C.C..GC......A...GU......CG.C.C...A....-.--.-.-..--------..-....--.--.-gcgcgccugcgg................................................cggaagccccagc...--.-.-..-....----.....GGC..G...CC...U...G..C.G...G.C.C......A..U...G...A..G.U
   NZ_LT906482.1     ACUCAUCGACUUGGUGGAAGAAU...CCGGCAUUGCUGAGAUUGAAGUAACCGAAGGUGAAGAAA.AAGUGCGCAU....CACC.........................................................................CG....C....U......C...G.....--....-.C..U.......G.G..C...C...G...C...G...C....C...G....C.A..G.C..CC..G.U.GU---..-.-..---.........................................a..--U.GCC.G.C.U.GC.G..CC-.-.UGC....................................................C.GU...G...G..C...U......G...C...C...G.-CU.C..........C.....G......G.....C...U......C..C.C..GCc...gcG...GC......CG.C.U...G....C.CG.C.A..CCCGUUGC..A....GC.C-.-............................................................................GC.A.G..G....CGCGc...cUGC..C...GC...C..cC..C.G...C.C.C......G..U...G...A..U.U


   Structure         ((((((.((((((((...(((...........)))....................((((..((((...(((((....................................................................................))....)....)......).........))....).)..........).)..)...)..................................................((......................................................))......(.(.(.((.(...............................................................).))...)...)..)..........)...)...)...).))).).............................................(..((..........((.......(.(.(..........((.(.(......((((..........................................................................................)).).).......)))).....)))......)).......)..).)..............)..)...)...)..).)


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accB-accC



Position: 320-515, Conformation: #0







97% 90% 75% 50% Nucleotide present N N N Nucleotide identify E < 0.1 Base-pair covariation E < 0.05 Helix-level covariation 97% 90% 75%

R C U R A U C G A R Y U R G U G A A G A R U C G G Y A U Y C Y G A R Y U G A A A U Y C G A A G G Y G A A G A R C G U C G Y A U Y A Y C G Y Y R Y Y R C C R R Y C G C G Y G C C R C Y 5'